EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000007097 (Gene tree)
Gene ID: 362615
Gene Symbol: Gpatch3
Alias: Gpatc3|LOC362615|RGD1311216
Full Name: G patch domain containing 3
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 9163 bases
Position: chr5:151796814-151805976
Accession: 1311216
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000009394	G-patch	PF01585.23	8.6e-08	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000009394	-	1781	XM_342933	ENSRNOP00000009394	522 (aa)	XP_001065500	D4A385

Gene Model

Click here to download ENSRNOG00000007097's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000007097's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000007097	Gpatch3	100	83.429	ENSG00000198746	GPATCH3	100	89.844	Homo_sapiens
ENSRNOG00000007097	Gpatch3	95	54.492	ENSAPOG00000001212	gpatch3	97	55.859	Acanthochromis_polyacanthus
ENSRNOG00000007097	Gpatch3	100	84.674	ENSAMEG00000010801	GPATCH3	100	84.291	Ailuropoda_melanoleuca
ENSRNOG00000007097	Gpatch3	94	57.564	ENSAOCG00000019352	gpatch3	97	56.890	Amphiprion_ocellaris
ENSRNOG00000007097	Gpatch3	94	56.890	ENSAPEG00000018926	gpatch3	97	56.496	Amphiprion_percula
ENSRNOG00000007097	Gpatch3	95	55.253	ENSATEG00000023759	gpatch3	97	53.682	Anabas_testudineus
ENSRNOG00000007097	Gpatch3	65	71.387	ENSAPLG00000010745	GPATCH3	99	68.986	Anas_platyrhynchos
ENSRNOG00000007097	Gpatch3	95	59.351	ENSACAG00000016709	GPATCH3	95	58.397	Anolis_carolinensis
ENSRNOG00000007097	Gpatch3	98	83.883	ENSANAG00000035944	GPATCH3	100	83.527	Aotus_nancymaae
ENSRNOG00000007097	Gpatch3	94	55.842	ENSACLG00000012807	gpatch3	95	55.796	Astatotilapia_calliptera
ENSRNOG00000007097	Gpatch3	95	54.728	ENSAMXG00000034582	gpatch3	96	53.722	Astyanax_mexicanus
ENSRNOG00000007097	Gpatch3	100	82.184	ENSBTAG00000014849	GPATCH3	100	81.226	Bos_taurus
ENSRNOG00000007097	Gpatch3	94	35.878	WBGene00019467	K07B1.7	93	35.878	Caenorhabditis_elegans
ENSRNOG00000007097	Gpatch3	100	82.955	ENSCJAG00000010000	GPATCH3	99	82.765	Callithrix_jacchus
ENSRNOG00000007097	Gpatch3	100	84.291	ENSCAFG00000012265	GPATCH3	100	83.908	Canis_familiaris
ENSRNOG00000007097	Gpatch3	100	84.291	ENSCAFG00020021640	GPATCH3	100	83.908	Canis_lupus_dingo
ENSRNOG00000007097	Gpatch3	100	81.992	ENSCHIG00000024245	GPATCH3	98	81.226	Capra_hircus
ENSRNOG00000007097	Gpatch3	100	84.571	ENSTSYG00000011753	GPATCH3	100	84.381	Carlito_syrichta
ENSRNOG00000007097	Gpatch3	62	82.663	ENSCAPG00000007313	GPATCH3	100	81.791	Cavia_aperea
ENSRNOG00000007097	Gpatch3	98	83.203	ENSCPOG00000010404	GPATCH3	100	82.443	Cavia_porcellus
ENSRNOG00000007097	Gpatch3	98	82.913	ENSCCAG00000030482	GPATCH3	100	82.364	Cebus_capucinus
ENSRNOG00000007097	Gpatch3	100	80.381	ENSCATG00000033598	GPATCH3	100	80.952	Cercocebus_atys
ENSRNOG00000007097	Gpatch3	98	82.422	ENSCLAG00000012064	GPATCH3	100	82.184	Chinchilla_lanigera
ENSRNOG00000007097	Gpatch3	97	65.497	ENSCPBG00000024968	GPATCH3	97	64.971	Chrysemys_picta_bellii
ENSRNOG00000007097	Gpatch3	100	83.048	ENSCANG00000036795	GPATCH3	100	83.619	Colobus_angolensis_palliatus
ENSRNOG00000007097	Gpatch3	100	85.660	ENSCGRG00001002930	Gpatch3	100	85.660	Cricetulus_griseus_chok1gshd
ENSRNOG00000007097	Gpatch3	100	85.660	ENSCGRG00000004699	Gpatch3	100	85.660	Cricetulus_griseus_crigri
ENSRNOG00000007097	Gpatch3	94	56.213	ENSCSEG00000005277	gpatch3	96	56.016	Cynoglossus_semilaevis
ENSRNOG00000007097	Gpatch3	94	54.651	ENSCVAG00000000827	gpatch3	96	56.693	Cyprinodon_variegatus
ENSRNOG00000007097	Gpatch3	96	65.833	ENSDARG00000052747	gpatch3	67	68.720	Danio_rerio
ENSRNOG00000007097	Gpatch3	100	83.779	ENSDNOG00000016999	GPATCH3	100	83.206	Dasypus_novemcinctus
ENSRNOG00000007097	Gpatch3	93	45.129	ENSEBUG00000013911	gpatch3	91	44.752	Eptatretus_burgeri
ENSRNOG00000007097	Gpatch3	100	82.983	ENSEASG00005008636	GPATCH3	100	83.174	Equus_asinus_asinus
ENSRNOG00000007097	Gpatch3	100	82.983	ENSECAG00000007653	GPATCH3	100	83.174	Equus_caballus
ENSRNOG00000007097	Gpatch3	94	56.200	ENSELUG00000000963	gpatch3	96	56.600	Esox_lucius
ENSRNOG00000007097	Gpatch3	100	83.174	ENSFCAG00000012819	GPATCH3	100	82.983	Felis_catus
ENSRNOG00000007097	Gpatch3	66	71.304	ENSFALG00000000319	GPATCH3	95	69.075	Ficedula_albicollis
ENSRNOG00000007097	Gpatch3	100	81.870	ENSFDAG00000016270	GPATCH3	100	81.489	Fukomys_damarensis
ENSRNOG00000007097	Gpatch3	95	57.957	ENSFHEG00000015264	gpatch3	97	57.310	Fundulus_heteroclitus
ENSRNOG00000007097	Gpatch3	94	55.098	ENSGMOG00000000991	gpatch3	97	55.490	Gadus_morhua
ENSRNOG00000007097	Gpatch3	97	61.165	ENSGALG00000000881	GPATCH3	96	61.328	Gallus_gallus
ENSRNOG00000007097	Gpatch3	94	55.837	ENSGAFG00000002531	gpatch3	93	62.209	Gambusia_affinis
ENSRNOG00000007097	Gpatch3	95	56.275	ENSGACG00000007199	gpatch3	97	57.451	Gasterosteus_aculeatus
ENSRNOG00000007097	Gpatch3	97	65.039	ENSGAGG00000023286	GPATCH3	97	65.039	Gopherus_agassizii
ENSRNOG00000007097	Gpatch3	100	83.619	ENSGGOG00000015305	GPATCH3	100	83.048	Gorilla_gorilla
ENSRNOG00000007097	Gpatch3	94	56.436	ENSHBUG00000020513	gpatch3	94	61.383	Haplochromis_burtoni
ENSRNOG00000007097	Gpatch3	100	83.206	ENSHGLG00000012492	GPATCH3	100	83.397	Heterocephalus_glaber_female
ENSRNOG00000007097	Gpatch3	100	83.206	ENSHGLG00100016909	GPATCH3	100	83.397	Heterocephalus_glaber_male
ENSRNOG00000007097	Gpatch3	94	58.300	ENSHCOG00000005739	gpatch3	97	56.719	Hippocampus_comes
ENSRNOG00000007097	Gpatch3	94	53.592	ENSIPUG00000007697	gpatch3	99	63.898	Ictalurus_punctatus
ENSRNOG00000007097	Gpatch3	100	84.160	ENSSTOG00000015220	GPATCH3	100	83.588	Ictidomys_tridecemlineatus
ENSRNOG00000007097	Gpatch3	100	85.171	ENSJJAG00000003292	Gpatch3	100	84.499	Jaculus_jaculus
ENSRNOG00000007097	Gpatch3	95	55.916	ENSKMAG00000020717	gpatch3	97	53.905	Kryptolebias_marmoratus
ENSRNOG00000007097	Gpatch3	95	54.563	ENSLBEG00000007046	gpatch3	96	55.058	Labrus_bergylta
ENSRNOG00000007097	Gpatch3	90	75.556	ENSLACG00000011400	GPATCH3	70	76.606	Latimeria_chalumnae
ENSRNOG00000007097	Gpatch3	95	58.858	ENSLOCG00000003858	gpatch3	98	58.465	Lepisosteus_oculatus
ENSRNOG00000007097	Gpatch3	99	83.206	ENSLAFG00000016691	GPATCH3	100	82.824	Loxodonta_africana
ENSRNOG00000007097	Gpatch3	100	84.000	ENSMFAG00000030918	GPATCH3	100	84.000	Macaca_fascicularis
ENSRNOG00000007097	Gpatch3	100	83.810	ENSMMUG00000018723	GPATCH3	100	83.810	Macaca_mulatta
ENSRNOG00000007097	Gpatch3	86	74.393	ENSMNEG00000033889	GPATCH3	94	73.731	Macaca_nemestrina
ENSRNOG00000007097	Gpatch3	100	84.190	ENSMLEG00000033364	GPATCH3	100	84.000	Mandrillus_leucophaeus
ENSRNOG00000007097	Gpatch3	95	56.615	ENSMAMG00000023975	gpatch3	97	55.664	Mastacembelus_armatus
ENSRNOG00000007097	Gpatch3	94	55.842	ENSMZEG00005019731	gpatch3	95	55.796	Maylandia_zebra
ENSRNOG00000007097	Gpatch3	68	68.508	ENSMGAG00000000813	GPATCH3	98	67.313	Meleagris_gallopavo
ENSRNOG00000007097	Gpatch3	100	87.311	ENSMAUG00000002005	Gpatch3	100	87.500	Mesocricetus_auratus
ENSRNOG00000007097	Gpatch3	100	85.714	ENSMICG00000015656	GPATCH3	100	84.952	Microcebus_murinus
ENSRNOG00000007097	Gpatch3	100	87.238	ENSMOCG00000022375	Gpatch3	100	87.048	Microtus_ochrogaster
ENSRNOG00000007097	Gpatch3	63	63.174	ENSMMOG00000008963	gpatch3	93	62.048	Mola_mola
ENSRNOG00000007097	Gpatch3	96	75.000	ENSMODG00000014417	GPATCH3	95	75.000	Monodelphis_domestica
ENSRNOG00000007097	Gpatch3	94	56.126	ENSMALG00000007586	gpatch3	96	55.159	Monopterus_albus
ENSRNOG00000007097	Gpatch3	100	92.571	MGP_CAROLIEiJ_G0026594	Gpatch3	100	91.810	Mus_caroli
ENSRNOG00000007097	Gpatch3	100	91.825	ENSMUSG00000028850	Gpatch3	100	91.255	Mus_musculus
ENSRNOG00000007097	Gpatch3	100	89.675	MGP_PahariEiJ_G0028927	Gpatch3	100	91.013	Mus_pahari
ENSRNOG00000007097	Gpatch3	100	92.381	MGP_SPRETEiJ_G0027575	Gpatch3	99	95.522	Mus_spretus
ENSRNOG00000007097	Gpatch3	100	84.866	ENSMPUG00000015665	GPATCH3	100	84.483	Mustela_putorius_furo
ENSRNOG00000007097	Gpatch3	100	82.218	ENSMLUG00000023528	GPATCH3	100	82.027	Myotis_lucifugus
ENSRNOG00000007097	Gpatch3	100	85.878	ENSNGAG00000006821	Gpatch3	100	85.115	Nannospalax_galili
ENSRNOG00000007097	Gpatch3	94	53.535	ENSNBRG00000000365	gpatch3	95	53.535	Neolamprologus_brichardi
ENSRNOG00000007097	Gpatch3	99	80.268	ENSNLEG00000009387	GPATCH3	100	79.310	Nomascus_leucogenys
ENSRNOG00000007097	Gpatch3	98	75.048	ENSMEUG00000003236	GPATCH3	98	73.574	Notamacropus_eugenii
ENSRNOG00000007097	Gpatch3	100	82.184	ENSOPRG00000016429	GPATCH3	100	82.567	Ochotona_princeps
ENSRNOG00000007097	Gpatch3	100	81.644	ENSODEG00000003292	GPATCH3	100	82.027	Octodon_degus
ENSRNOG00000007097	Gpatch3	94	58.200	ENSONIG00000006771	gpatch3	95	58.000	Oreochromis_niloticus
ENSRNOG00000007097	Gpatch3	88	80.000	ENSOCUG00000006411	GPATCH3	100	79.449	Oryctolagus_cuniculus
ENSRNOG00000007097	Gpatch3	94	56.522	ENSORLG00000004435	gpatch3	96	55.952	Oryzias_latipes
ENSRNOG00000007097	Gpatch3	94	55.769	ENSORLG00020022609	gpatch3	97	55.577	Oryzias_latipes_hni
ENSRNOG00000007097	Gpatch3	94	56.480	ENSORLG00015008692	gpatch3	98	61.976	Oryzias_latipes_hsok
ENSRNOG00000007097	Gpatch3	94	56.064	ENSOMEG00000010991	gpatch3	97	54.941	Oryzias_melastigma
ENSRNOG00000007097	Gpatch3	99	82.150	ENSOGAG00000011647	GPATCH3	100	82.342	Otolemur_garnettii
ENSRNOG00000007097	Gpatch3	100	81.801	ENSOARG00000003955	GPATCH3	98	81.418	Ovis_aries
ENSRNOG00000007097	Gpatch3	100	83.619	ENSPPAG00000032902	GPATCH3	100	83.048	Pan_paniscus
ENSRNOG00000007097	Gpatch3	100	83.174	ENSPPRG00000024244	GPATCH3	100	83.174	Panthera_pardus
ENSRNOG00000007097	Gpatch3	100	82.642	ENSPTIG00000014693	GPATCH3	100	82.642	Panthera_tigris_altaica
ENSRNOG00000007097	Gpatch3	100	83.238	ENSPTRG00000023419	GPATCH3	100	82.667	Pan_troglodytes
ENSRNOG00000007097	Gpatch3	100	84.381	ENSPANG00000007984	GPATCH3	100	84.190	Papio_anubis
ENSRNOG00000007097	Gpatch3	95	58.929	ENSPKIG00000020073	gpatch3	96	58.333	Paramormyrops_kingsleyae
ENSRNOG00000007097	Gpatch3	78	70.000	ENSPSIG00000017160	GPATCH3	99	69.756	Pelodiscus_sinensis
ENSRNOG00000007097	Gpatch3	94	54.618	ENSPMGG00000001703	gpatch3	96	54.819	Periophthalmus_magnuspinnatus
ENSRNOG00000007097	Gpatch3	100	86.312	ENSPEMG00000020632	Gpatch3	100	86.502	Peromyscus_maniculatus_bairdii
ENSRNOG00000007097	Gpatch3	96	75.494	ENSPCIG00000012681	GPATCH3	98	71.977	Phascolarctos_cinereus
ENSRNOG00000007097	Gpatch3	95	55.929	ENSPFOG00000009928	gpatch3	97	56.719	Poecilia_formosa
ENSRNOG00000007097	Gpatch3	95	54.845	ENSPLAG00000023784	gpatch3	97	55.233	Poecilia_latipinna
ENSRNOG00000007097	Gpatch3	95	55.253	ENSPMEG00000010268	gpatch3	97	56.031	Poecilia_mexicana
ENSRNOG00000007097	Gpatch3	96	56.859	ENSPREG00000008873	gpatch3	97	56.461	Poecilia_reticulata
ENSRNOG00000007097	Gpatch3	98	84.375	ENSPPYG00000001675	GPATCH3	100	83.429	Pongo_abelii
ENSRNOG00000007097	Gpatch3	100	82.824	ENSPCAG00000008286	GPATCH3	100	82.061	Procavia_capensis
ENSRNOG00000007097	Gpatch3	100	85.333	ENSPCOG00000020145	GPATCH3	100	84.571	Propithecus_coquereli
ENSRNOG00000007097	Gpatch3	100	75.382	ENSPVAG00000017282	GPATCH3	100	74.809	Pteropus_vampyrus
ENSRNOG00000007097	Gpatch3	94	55.842	ENSPNYG00000005172	gpatch3	98	55.796	Pundamilia_nyererei
ENSRNOG00000007097	Gpatch3	94	55.620	ENSPNAG00000018501	gpatch3	97	56.530	Pygocentrus_nattereri
ENSRNOG00000007097	Gpatch3	100	83.238	ENSRBIG00000005853	GPATCH3	100	83.810	Rhinopithecus_bieti
ENSRNOG00000007097	Gpatch3	100	83.238	ENSRROG00000038382	GPATCH3	100	83.810	Rhinopithecus_roxellana
ENSRNOG00000007097	Gpatch3	98	83.689	ENSSBOG00000019680	GPATCH3	99	87.288	Saimiri_boliviensis_boliviensis
ENSRNOG00000007097	Gpatch3	96	75.146	ENSSHAG00000014268	GPATCH3	98	73.574	Sarcophilus_harrisii
ENSRNOG00000007097	Gpatch3	95	56.947	ENSSFOG00015009602	gpatch3	97	56.093	Scleropages_formosus
ENSRNOG00000007097	Gpatch3	94	56.693	ENSSMAG00000002067	gpatch3	96	55.050	Scophthalmus_maximus
ENSRNOG00000007097	Gpatch3	94	57.285	ENSSDUG00000017071	gpatch3	96	56.213	Seriola_dumerili
ENSRNOG00000007097	Gpatch3	94	57.086	ENSSLDG00000016549	gpatch3	96	56.016	Seriola_lalandi_dorsalis
ENSRNOG00000007097	Gpatch3	99	60.681	ENSSPUG00000018299	GPATCH3	99	60.491	Sphenodon_punctatus
ENSRNOG00000007097	Gpatch3	94	55.709	ENSSPAG00000013046	gpatch3	97	56.385	Stegastes_partitus
ENSRNOG00000007097	Gpatch3	100	82.409	ENSSSCG00000003564	GPATCH3	95	86.005	Sus_scrofa
ENSRNOG00000007097	Gpatch3	77	63.119	ENSTGUG00000000986	GPATCH3	100	66.005	Taeniopygia_guttata
ENSRNOG00000007097	Gpatch3	94	53.089	ENSTRUG00000013294	gpatch3	96	53.307	Takifugu_rubripes
ENSRNOG00000007097	Gpatch3	94	56.582	ENSTNIG00000009657	gpatch3	98	55.731	Tetraodon_nigroviridis
ENSRNOG00000007097	Gpatch3	84	86.628	ENSTBEG00000002042	GPATCH3	86	86.628	Tupaia_belangeri
ENSRNOG00000007097	Gpatch3	98	77.691	ENSTTRG00000016677	GPATCH3	99	76.291	Tursiops_truncatus
ENSRNOG00000007097	Gpatch3	100	84.674	ENSUAMG00000026235	GPATCH3	100	84.291	Ursus_americanus
ENSRNOG00000007097	Gpatch3	100	84.674	ENSUMAG00000011894	GPATCH3	100	84.291	Ursus_maritimus
ENSRNOG00000007097	Gpatch3	100	84.483	ENSVVUG00000012041	GPATCH3	100	84.100	Vulpes_vulpes
ENSRNOG00000007097	Gpatch3	97	52.157	ENSXETG00000030345	GPATCH3	99	53.200	Xenopus_tropicalis
ENSRNOG00000007097	Gpatch3	94	53.360	ENSXCOG00000016129	gpatch3	95	53.360	Xiphophorus_couchianus
ENSRNOG00000007097	Gpatch3	94	56.660	ENSXMAG00000010749	gpatch3	96	56.660	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0032480	negative regulation of type I interferon production	-	IEA	Process
GO:0032480	negative regulation of type I interferon production	-	ISO	Process
GO:0039536	negative regulation of RIG-I signaling pathway	-	IEA	Process
GO:0039536	negative regulation of RIG-I signaling pathway	-	ISO	Process
GO:0045893	positive regulation of transcription, DNA-templated	-	IEA	Process
GO:0045893	positive regulation of transcription, DNA-templated	-	ISO	Process