EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000007340 (Gene tree)
Gene ID: 500305
Gene Symbol: Dcp1b
Alias: LOC500305|RGD1562214
Full Name: decapping mRNA 1B
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 35662 bases
Position: chr4:151250041-151285702
Accession: 1562214
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000009832	DCP1	PF06058.13	1.2e-42	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000009832	-	2022	XM_003749821	ENSRNOP00000009832	582 (aa)	XP_001057512	D3ZZJ7

Gene Model

Click here to download ENSRNOG00000007340's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000007340's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000007340	Dcp1b	99	63.857	ENSG00000151065	DCP1B	88	94.286	Homo_sapiens
ENSRNOG00000007340	Dcp1b	98	61.184	ENSAMEG00000004141	DCP1B	98	62.500	Ailuropoda_melanoleuca
ENSRNOG00000007340	Dcp1b	55	46.073	ENSATEG00000015045	dcp1b	52	46.092	Anabas_testudineus
ENSRNOG00000007340	Dcp1b	99	55.340	ENSAPLG00000004762	DCP1B	98	55.172	Anas_platyrhynchos
ENSRNOG00000007340	Dcp1b	96	53.808	ENSACAG00000005541	DCP1B	91	53.477	Anolis_carolinensis
ENSRNOG00000007340	Dcp1b	99	61.958	ENSANAG00000025391	DCP1B	69	93.333	Aotus_nancymaae
ENSRNOG00000007340	Dcp1b	54	50.606	ENSACLG00000026164	dcp1b	63	51.840	Astatotilapia_calliptera
ENSRNOG00000007340	Dcp1b	58	51.397	ENSAMXG00000007683	dcp1b	62	54.103	Astyanax_mexicanus
ENSRNOG00000007340	Dcp1b	99	57.025	ENSBTAG00000030285	DCP1B	98	57.667	Bos_taurus
ENSRNOG00000007340	Dcp1b	99	62.963	ENSCJAG00000039529	DCP1B	97	62.480	Callithrix_jacchus
ENSRNOG00000007340	Dcp1b	99	63.754	ENSCAFG00000015993	DCP1B	98	63.115	Canis_familiaris
ENSRNOG00000007340	Dcp1b	99	63.754	ENSCAFG00020012014	DCP1B	98	63.115	Canis_lupus_dingo
ENSRNOG00000007340	Dcp1b	97	57.860	ENSCHIG00000014193	DCP1B	98	57.143	Capra_hircus
ENSRNOG00000007340	Dcp1b	98	62.623	ENSTSYG00000008455	DCP1B	98	62.273	Carlito_syrichta
ENSRNOG00000007340	Dcp1b	91	52.700	ENSCAPG00000012066	DCP1B	100	53.259	Cavia_aperea
ENSRNOG00000007340	Dcp1b	100	60.032	ENSCPOG00000005279	DCP1B	99	60.164	Cavia_porcellus
ENSRNOG00000007340	Dcp1b	99	64.239	ENSCCAG00000026870	DCP1B	69	94.286	Cebus_capucinus
ENSRNOG00000007340	Dcp1b	99	61.452	ENSCATG00000031397	DCP1B	69	94.286	Cercocebus_atys
ENSRNOG00000007340	Dcp1b	99	61.129	ENSCSAG00000011349	DCP1B	98	60.626	Chlorocebus_sabaeus
ENSRNOG00000007340	Dcp1b	89	58.011	ENSCHOG00000003452	DCP1B	99	59.116	Choloepus_hoffmanni
ENSRNOG00000007340	Dcp1b	98	56.134	ENSCPBG00000027442	DCP1B	98	55.686	Chrysemys_picta_bellii
ENSRNOG00000007340	Dcp1b	99	61.264	ENSCANG00000036019	DCP1B	69	94.286	Colobus_angolensis_palliatus
ENSRNOG00000007340	Dcp1b	100	87.521	ENSCGRG00001016549	Dcp1b	100	86.838	Cricetulus_griseus_chok1gshd
ENSRNOG00000007340	Dcp1b	91	87.103	ENSCGRG00000013122	Dcp1b	100	86.355	Cricetulus_griseus_crigri
ENSRNOG00000007340	Dcp1b	99	38.370	ENSDARG00000045484	dcp1b	60	49.538	Danio_rerio
ENSRNOG00000007340	Dcp1b	99	64.250	ENSDNOG00000003156	DCP1B	98	65.442	Dasypus_novemcinctus
ENSRNOG00000007340	Dcp1b	88	93.333	ENSETEG00000005873	DCP1B	87	94.845	Echinops_telfairi
ENSRNOG00000007340	Dcp1b	99	63.857	ENSEASG00005008434	DCP1B	89	63.209	Equus_asinus_asinus
ENSRNOG00000007340	Dcp1b	99	64.019	ENSECAG00000018293	DCP1B	98	63.054	Equus_caballus
ENSRNOG00000007340	Dcp1b	91	51.543	ENSEEUG00000007906	DCP1B	99	51.180	Erinaceus_europaeus
ENSRNOG00000007340	Dcp1b	52	54.348	ENSELUG00000011344	dcp1b	54	54.662	Esox_lucius
ENSRNOG00000007340	Dcp1b	99	64.725	ENSFCAG00000004819	DCP1B	98	63.934	Felis_catus
ENSRNOG00000007340	Dcp1b	87	50.640	ENSFALG00000003240	DCP1B	100	50.733	Ficedula_albicollis
ENSRNOG00000007340	Dcp1b	99	61.812	ENSFDAG00000018093	DCP1B	98	61.967	Fukomys_damarensis
ENSRNOG00000007340	Dcp1b	98	55.025	ENSGALG00000050288	DCP1B	98	54.754	Gallus_gallus
ENSRNOG00000007340	Dcp1b	99	37.407	ENSGAFG00000016200	dcp1b	54	48.276	Gambusia_affinis
ENSRNOG00000007340	Dcp1b	83	51.786	ENSGACG00000019692	dcp1b	51	52.439	Gasterosteus_aculeatus
ENSRNOG00000007340	Dcp1b	99	55.987	ENSGAGG00000014114	DCP1B	98	55.501	Gopherus_agassizii
ENSRNOG00000007340	Dcp1b	99	63.387	ENSGGOG00000010659	DCP1B	88	94.286	Gorilla_gorilla
ENSRNOG00000007340	Dcp1b	54	47.309	ENSHBUG00000006101	dcp1b	96	39.717	Haplochromis_burtoni
ENSRNOG00000007340	Dcp1b	99	64.344	ENSHGLG00000019233	DCP1B	98	64.696	Heterocephalus_glaber_female
ENSRNOG00000007340	Dcp1b	99	64.182	ENSHGLG00100007645	DCP1B	98	64.532	Heterocephalus_glaber_male
ENSRNOG00000007340	Dcp1b	76	49.536	ENSHCOG00000014509	dcp1b	62	49.544	Hippocampus_comes
ENSRNOG00000007340	Dcp1b	99	63.974	ENSSTOG00000027287	DCP1B	98	64.484	Ictidomys_tridecemlineatus
ENSRNOG00000007340	Dcp1b	95	53.025	ENSKMAG00000014961	dcp1b	74	79.630	Kryptolebias_marmoratus
ENSRNOG00000007340	Dcp1b	98	46.493	ENSLACG00000017357	DCP1B	98	45.203	Latimeria_chalumnae
ENSRNOG00000007340	Dcp1b	97	46.942	ENSLOCG00000016629	dcp1b	96	45.964	Lepisosteus_oculatus
ENSRNOG00000007340	Dcp1b	99	61.912	ENSMFAG00000028687	DCP1B	90	75.182	Macaca_fascicularis
ENSRNOG00000007340	Dcp1b	99	62.075	ENSMMUG00000010992	DCP1B	94	76.119	Macaca_mulatta
ENSRNOG00000007340	Dcp1b	99	62.237	ENSMNEG00000045219	DCP1B	90	75.182	Macaca_nemestrina
ENSRNOG00000007340	Dcp1b	99	61.588	ENSMLEG00000036414	DCP1B	69	94.286	Mandrillus_leucophaeus
ENSRNOG00000007340	Dcp1b	53	51.524	ENSMZEG00005007893	dcp1b	63	51.840	Maylandia_zebra
ENSRNOG00000007340	Dcp1b	98	51.227	ENSMGAG00000013437	DCP1B	98	50.814	Meleagris_gallopavo
ENSRNOG00000007340	Dcp1b	100	83.646	ENSMAUG00000000763	Dcp1b	100	83.646	Mesocricetus_auratus
ENSRNOG00000007340	Dcp1b	99	63.201	ENSMICG00000005702	DCP1B	99	63.201	Microcebus_murinus
ENSRNOG00000007340	Dcp1b	100	84.668	ENSMOCG00000016799	Dcp1b	100	84.327	Microtus_ochrogaster
ENSRNOG00000007340	Dcp1b	100	59.128	ENSMODG00000018424	DCP1B	99	57.980	Monodelphis_domestica
ENSRNOG00000007340	Dcp1b	100	91.409	MGP_CAROLIEiJ_G0028789	Dcp1b	100	91.237	Mus_caroli
ENSRNOG00000007340	Dcp1b	99	92.573	ENSMUSG00000041477	Dcp1b	99	92.573	Mus_musculus
ENSRNOG00000007340	Dcp1b	100	91.638	MGP_PahariEiJ_G0022544	Dcp1b	100	91.638	Mus_pahari
ENSRNOG00000007340	Dcp1b	100	92.440	MGP_SPRETEiJ_G0029821	Dcp1b	100	92.440	Mus_spretus
ENSRNOG00000007340	Dcp1b	99	62.561	ENSMPUG00000018069	DCP1B	98	61.905	Mustela_putorius_furo
ENSRNOG00000007340	Dcp1b	91	58.348	ENSMLUG00000002252	DCP1B	99	60.954	Myotis_lucifugus
ENSRNOG00000007340	Dcp1b	100	77.816	ENSNGAG00000022519	Dcp1b	99	78.028	Nannospalax_galili
ENSRNOG00000007340	Dcp1b	53	50.915	ENSNBRG00000004185	dcp1b	87	82.418	Neolamprologus_brichardi
ENSRNOG00000007340	Dcp1b	99	62.723	ENSNLEG00000002698	DCP1B	88	94.286	Nomascus_leucogenys
ENSRNOG00000007340	Dcp1b	90	84.615	ENSMEUG00000003431	DCP1B	85	84.615	Notamacropus_eugenii
ENSRNOG00000007340	Dcp1b	99	53.958	ENSOPRG00000003721	DCP1B	98	53.618	Ochotona_princeps
ENSRNOG00000007340	Dcp1b	100	62.561	ENSOCUG00000011593	DCP1B	100	62.723	Oryctolagus_cuniculus
ENSRNOG00000007340	Dcp1b	55	45.676	ENSORLG00000014000	dcp1b	54	47.107	Oryzias_latipes
ENSRNOG00000007340	Dcp1b	54	46.006	ENSORLG00020016483	dcp1b	54	46.006	Oryzias_latipes_hni
ENSRNOG00000007340	Dcp1b	54	46.281	ENSORLG00015015461	dcp1b	75	81.633	Oryzias_latipes_hsok
ENSRNOG00000007340	Dcp1b	99	64.521	ENSOGAG00000031515	DCP1B	98	63.880	Otolemur_garnettii
ENSRNOG00000007340	Dcp1b	97	55.853	ENSOARG00000012960	DCP1B	98	55.738	Ovis_aries
ENSRNOG00000007340	Dcp1b	100	63.301	ENSPPAG00000031510	DCP1B	88	94.286	Pan_paniscus
ENSRNOG00000007340	Dcp1b	99	64.725	ENSPPRG00000023318	DCP1B	98	63.934	Panthera_pardus
ENSRNOG00000007340	Dcp1b	99	64.725	ENSPTIG00000021851	DCP1B	98	63.934	Panthera_tigris_altaica
ENSRNOG00000007340	Dcp1b	99	63.328	ENSPTRG00000004525	DCP1B	88	94.286	Pan_troglodytes
ENSRNOG00000007340	Dcp1b	99	61.415	ENSPANG00000008311	DCP1B	69	94.286	Papio_anubis
ENSRNOG00000007340	Dcp1b	56	54.118	ENSPKIG00000000520	dcp1b	58	82.474	Paramormyrops_kingsleyae
ENSRNOG00000007340	Dcp1b	98	54.276	ENSPSIG00000009160	DCP1B	99	53.846	Pelodiscus_sinensis
ENSRNOG00000007340	Dcp1b	100	86.519	ENSPEMG00000019470	Dcp1b	98	86.135	Peromyscus_maniculatus_bairdii
ENSRNOG00000007340	Dcp1b	100	59.774	ENSPCIG00000019743	DCP1B	99	58.920	Phascolarctos_cinereus
ENSRNOG00000007340	Dcp1b	57	48.851	ENSPFOG00000005090	dcp1b	55	49.128	Poecilia_formosa
ENSRNOG00000007340	Dcp1b	55	45.257	ENSPLAG00000005883	dcp1b	52	47.727	Poecilia_latipinna
ENSRNOG00000007340	Dcp1b	87	58.577	ENSPPYG00000004145	DCP1B	99	58.577	Pongo_abelii
ENSRNOG00000007340	Dcp1b	91	92.063	ENSPCOG00000026128	DCP1B	99	52.467	Propithecus_coquereli
ENSRNOG00000007340	Dcp1b	99	63.371	ENSPVAG00000001978	DCP1B	98	63.054	Pteropus_vampyrus
ENSRNOG00000007340	Dcp1b	54	47.592	ENSPNYG00000020418	dcp1b	52	47.863	Pundamilia_nyererei
ENSRNOG00000007340	Dcp1b	59	44.633	ENSPNAG00000003792	dcp1b	65	44.633	Pygocentrus_nattereri
ENSRNOG00000007340	Dcp1b	99	60.645	ENSRBIG00000032794	DCP1B	69	94.286	Rhinopithecus_bieti
ENSRNOG00000007340	Dcp1b	99	60.645	ENSRROG00000041000	DCP1B	69	94.286	Rhinopithecus_roxellana
ENSRNOG00000007340	Dcp1b	99	62.963	ENSSBOG00000033086	DCP1B	69	93.333	Saimiri_boliviensis_boliviensis
ENSRNOG00000007340	Dcp1b	89	53.597	ENSSHAG00000012569	DCP1B	100	54.137	Sarcophilus_harrisii
ENSRNOG00000007340	Dcp1b	62	65.126	ENSSFOG00015023556	dcp1b	52	67.111	Scleropages_formosus
ENSRNOG00000007340	Dcp1b	55	48.256	ENSSLDG00000008782	dcp1b	83	83.505	Seriola_lalandi_dorsalis
ENSRNOG00000007340	Dcp1b	97	55.686	ENSSSCG00000023976	-	84	91.837	Sus_scrofa
ENSRNOG00000007340	Dcp1b	98	55.099	ENSTGUG00000012575	DCP1B	99	54.770	Taeniopygia_guttata
ENSRNOG00000007340	Dcp1b	87	58.932	ENSUMAG00000011668	DCP1B	99	59.116	Ursus_maritimus
ENSRNOG00000007340	Dcp1b	97	64.238	ENSVVUG00000020529	DCP1B	98	63.770	Vulpes_vulpes
ENSRNOG00000007340	Dcp1b	98	50.500	ENSXETG00000000899	dcp1b	96	51.613	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000290	deadenylation-dependent decapping of nuclear-transcribed mRNA	21873635.	IBA	Process
GO:0000932	P-body	21873635.	IBA	Component
GO:0000932	P-body	-	ISO	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0008047	enzyme activator activity	-	IEA	Function
GO:0031087	deadenylation-independent decapping of nuclear-transcribed mRNA	21873635.	IBA	Process
GO:0043085	positive regulation of catalytic activity	-	IEA	Process
GO:0043231	intracellular membrane-bounded organelle	-	IEA	Component
GO:0043231	intracellular membrane-bounded organelle	-	ISO	Component