EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000007648 (Gene tree)
Gene ID: 79434
Gene Symbol: Rab11b
Alias: -
Full Name: RAB11B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 13268 bases
Position: chr7:18598880-18612147
Accession: 68369
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000010197	MMR_HSR1	PF01926.23	2.9e-07	1	1
ENSRNOP00000071150	MMR_HSR1	PF01926.23	2.9e-07	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000010197	-	1632	-	ENSRNOP00000010197	218 (aa)	-	O35509
ENSRNOT00000078122	-	718	-	ENSRNOP00000071150	217 (aa)	-	A0A0G2JZR4

Gene Model

Click here to download ENSRNOG00000007648's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno04144	Endocytosis	KEGG
rno04152	AMPK signaling pathway	KEGG
rno04962	Vasopressin-regulated water reabsorption	KEGG
rno05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000007648's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000007648	Rab11b	94	37.143	ENSRNOG00000030443	Rab9a	97	37.143
ENSRNOG00000007648	Rab11b	70	36.538	ENSRNOG00000023375	Rab34	61	36.538
ENSRNOG00000007648	Rab11b	99	45.581	ENSRNOG00000004992	Rab1a	100	45.581
ENSRNOG00000007648	Rab11b	55	30.894	ENSRNOG00000004282	Arl4a	60	30.894
ENSRNOG00000007648	Rab11b	78	32.941	ENSRNOG00000009338	Kras	93	34.066
ENSRNOG00000007648	Rab11b	72	42.675	ENSRNOG00000005762	Rab22a	81	42.675
ENSRNOG00000007648	Rab11b	72	38.854	ENSRNOG00000018176	Rab6a	75	38.854
ENSRNOG00000007648	Rab11b	76	48.193	ENSRNOG00000022014	Rab35	99	42.105
ENSRNOG00000007648	Rab11b	94	42.512	ENSRNOG00000018568	Rab5c	90	42.512
ENSRNOG00000007648	Rab11b	74	47.531	ENSRNOG00000018972	Rab18	78	47.531
ENSRNOG00000007648	Rab11b	74	41.615	ENSRNOG00000042189	Rab31	83	41.615
ENSRNOG00000007648	Rab11b	68	35.333	ENSRNOG00000016611	Hras	85	36.420
ENSRNOG00000007648	Rab11b	96	39.524	ENSRNOG00000010224	Rab30	97	39.524
ENSRNOG00000007648	Rab11b	72	31.646	ENSRNOG00000014060	Mras	81	34.118
ENSRNOG00000007648	Rab11b	78	55.556	ENSRNOG00000012488	Rab2b	80	55.556
ENSRNOG00000007648	Rab11b	72	36.943	ENSRNOG00000013947	Rabl2	61	36.943
ENSRNOG00000007648	Rab11b	96	47.619	ENSRNOG00000050510	LOC102555167	99	47.619
ENSRNOG00000007648	Rab11b	77	30.220	ENSRNOG00000000956	Rasl11a	75	30.220
ENSRNOG00000007648	Rab11b	76	47.879	ENSRNOG00000016733	Rab13	81	47.879
ENSRNOG00000007648	Rab11b	75	32.927	ENSRNOG00000050578	Rheb	89	32.927
ENSRNOG00000007648	Rab11b	65	30.986	ENSRNOG00000005988	Arl8a	72	30.986
ENSRNOG00000007648	Rab11b	74	36.025	ENSRNOG00000009198	Rab6b	77	36.025
ENSRNOG00000007648	Rab11b	80	52.299	ENSRNOG00000018901	Rab14	81	52.299
ENSRNOG00000007648	Rab11b	78	39.773	ENSRNOG00000013035	Rab33b	76	39.773
ENSRNOG00000007648	Rab11b	88	34.555	ENSRNOG00000012629	Rab23	80	34.555
ENSRNOG00000007648	Rab11b	77	41.040	ENSRNOG00000047960	Rab9b	86	41.040
ENSRNOG00000007648	Rab11b	100	91.284	ENSRNOG00000011302	Rab11a	100	91.284
ENSRNOG00000007648	Rab11b	94	33.649	ENSRNOG00000001311	Rab36	79	33.649
ENSRNOG00000007648	Rab11b	81	40.331	ENSRNOG00000006698	Rab33a	75	40.331
ENSRNOG00000007648	Rab11b	72	42.767	ENSRNOG00000019295	Rab12	65	42.767
ENSRNOG00000007648	Rab11b	80	44.571	ENSRNOG00000007364	Rab15	82	44.571
ENSRNOG00000007648	Rab11b	100	60.538	ENSRNOG00000023640	Rab25	100	60.538
ENSRNOG00000007648	Rab11b	70	36.129	ENSRNOG00000023079	Nras	87	37.126
ENSRNOG00000007648	Rab11b	72	40.491	ENSRNOG00000012247	Rab7a	86	40.491
ENSRNOG00000007648	Rab11b	77	55.090	ENSRNOG00000005963	Rab2a	81	55.689
ENSRNOG00000007648	Rab11b	94	40.777	ENSRNOG00000006130	Rab5b	91	40.777

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000007648	Rab11b	100	100.000	ENSG00000185236	RAB11B	100	100.000	Homo_sapiens
ENSRNOG00000007648	Rab11b	99	98.630	ENSAMEG00000004955	RAB11B	99	98.630	Ailuropoda_melanoleuca
ENSRNOG00000007648	Rab11b	83	92.265	ENSACIG00000024374	rab11ba	70	97.059	Amphilophus_citrinellus
ENSRNOG00000007648	Rab11b	100	94.495	ENSAOCG00000018050	rab11ba	100	94.495	Amphiprion_ocellaris
ENSRNOG00000007648	Rab11b	100	94.037	ENSAPEG00000009177	rab11ba	100	94.037	Amphiprion_percula
ENSRNOG00000007648	Rab11b	100	95.413	ENSATEG00000023730	rab11ba	100	95.413	Anabas_testudineus
ENSRNOG00000007648	Rab11b	100	100.000	ENSANAG00000037616	RAB11B	100	100.000	Aotus_nancymaae
ENSRNOG00000007648	Rab11b	100	93.119	ENSACLG00000005420	rab11ba	100	93.119	Astatotilapia_calliptera
ENSRNOG00000007648	Rab11b	93	87.685	ENSACLG00000018852	-	92	87.685	Astatotilapia_calliptera
ENSRNOG00000007648	Rab11b	99	81.019	WBGene00004274	rab-11.1	99	81.019	Caenorhabditis_elegans
ENSRNOG00000007648	Rab11b	100	100.000	ENSCJAG00000010778	RAB11B	100	100.000	Callithrix_jacchus
ENSRNOG00000007648	Rab11b	100	100.000	ENSCAFG00000032060	RAB11B	100	100.000	Canis_familiaris
ENSRNOG00000007648	Rab11b	100	100.000	ENSCAFG00020022184	RAB11B	100	100.000	Canis_lupus_dingo
ENSRNOG00000007648	Rab11b	100	100.000	ENSTSYG00000014758	RAB11B	100	100.000	Carlito_syrichta
ENSRNOG00000007648	Rab11b	100	99.541	ENSCPOG00000030154	RAB11B	100	99.541	Cavia_porcellus
ENSRNOG00000007648	Rab11b	100	100.000	ENSCCAG00000031042	RAB11B	100	100.000	Cebus_capucinus
ENSRNOG00000007648	Rab11b	100	100.000	ENSCLAG00000003207	RAB11B	100	100.000	Chinchilla_lanigera
ENSRNOG00000007648	Rab11b	100	100.000	ENSCSAG00000008024	RAB11B	100	100.000	Chlorocebus_sabaeus
ENSRNOG00000007648	Rab11b	100	85.780	ENSCHOG00000013525	RAB11B	100	85.780	Choloepus_hoffmanni
ENSRNOG00000007648	Rab11b	100	84.475	ENSCING00000009526	-	100	84.475	Ciona_intestinalis
ENSRNOG00000007648	Rab11b	100	100.000	ENSCANG00000040517	RAB11B	100	100.000	Colobus_angolensis_palliatus
ENSRNOG00000007648	Rab11b	100	100.000	ENSCGRG00001013827	Rab11b	100	100.000	Cricetulus_griseus_chok1gshd
ENSRNOG00000007648	Rab11b	100	100.000	ENSCGRG00000010967	Rab11b	100	100.000	Cricetulus_griseus_crigri
ENSRNOG00000007648	Rab11b	100	94.495	ENSCSEG00000007121	rab11ba	84	94.495	Cynoglossus_semilaevis
ENSRNOG00000007648	Rab11b	100	96.330	ENSDARG00000041878	rab11ba	100	96.330	Danio_rerio
ENSRNOG00000007648	Rab11b	100	100.000	ENSDNOG00000014618	RAB11B	97	100.000	Dasypus_novemcinctus
ENSRNOG00000007648	Rab11b	100	98.165	ENSDNOG00000004134	-	100	98.165	Dasypus_novemcinctus
ENSRNOG00000007648	Rab11b	100	99.083	ENSDORG00000006304	Rab11b	100	99.083	Dipodomys_ordii
ENSRNOG00000007648	Rab11b	100	81.651	ENSEBUG00000015447	-	100	81.651	Eptatretus_burgeri
ENSRNOG00000007648	Rab11b	100	94.037	ENSEBUG00000011775	rab11ba	99	94.146	Eptatretus_burgeri
ENSRNOG00000007648	Rab11b	66	100.000	ENSEEUG00000009165	-	100	100.000	Erinaceus_europaeus
ENSRNOG00000007648	Rab11b	89	92.784	ENSELUG00000019240	-	99	92.784	Esox_lucius
ENSRNOG00000007648	Rab11b	100	99.541	ENSFCAG00000015216	RAB11B	100	99.541	Felis_catus
ENSRNOG00000007648	Rab11b	100	99.541	ENSFDAG00000019872	RAB11B	100	99.541	Fukomys_damarensis
ENSRNOG00000007648	Rab11b	100	94.037	ENSFHEG00000022642	rab11ba	100	94.037	Fundulus_heteroclitus
ENSRNOG00000007648	Rab11b	100	92.661	ENSGMOG00000007390	rab11ba	99	92.661	Gadus_morhua
ENSRNOG00000007648	Rab11b	100	94.495	ENSGAFG00000005679	rab11ba	100	94.495	Gambusia_affinis
ENSRNOG00000007648	Rab11b	100	99.083	ENSGAGG00000012557	-	100	99.083	Gopherus_agassizii
ENSRNOG00000007648	Rab11b	100	100.000	ENSHGLG00000014984	RAB11B	100	100.000	Heterocephalus_glaber_female
ENSRNOG00000007648	Rab11b	100	99.541	ENSHGLG00100003638	RAB11B	100	99.541	Heterocephalus_glaber_male
ENSRNOG00000007648	Rab11b	100	100.000	ENSSTOG00000031571	RAB11B	100	100.000	Ictidomys_tridecemlineatus
ENSRNOG00000007648	Rab11b	100	100.000	ENSJJAG00000018891	Rab11b	100	100.000	Jaculus_jaculus
ENSRNOG00000007648	Rab11b	100	94.954	ENSKMAG00000006082	-	100	94.954	Kryptolebias_marmoratus
ENSRNOG00000007648	Rab11b	100	94.954	ENSLBEG00000006087	rab11ba	100	94.954	Labrus_bergylta
ENSRNOG00000007648	Rab11b	78	99.412	ENSLACG00000016974	RAB11B	99	99.412	Latimeria_chalumnae
ENSRNOG00000007648	Rab11b	100	100.000	ENSLAFG00000013598	RAB11B	100	100.000	Loxodonta_africana
ENSRNOG00000007648	Rab11b	100	100.000	ENSMNEG00000039759	-	100	100.000	Macaca_nemestrina
ENSRNOG00000007648	Rab11b	100	94.495	ENSMAMG00000018556	rab11ba	100	94.495	Mastacembelus_armatus
ENSRNOG00000007648	Rab11b	93	87.685	ENSMZEG00005019251	-	92	87.685	Maylandia_zebra
ENSRNOG00000007648	Rab11b	100	93.119	ENSMZEG00005010947	rab11ba	100	93.119	Maylandia_zebra
ENSRNOG00000007648	Rab11b	100	99.541	ENSMAUG00000021579	Rab11b	100	99.541	Mesocricetus_auratus
ENSRNOG00000007648	Rab11b	100	99.541	ENSMOCG00000012667	Rab11b	100	99.541	Microtus_ochrogaster
ENSRNOG00000007648	Rab11b	100	92.202	ENSMALG00000021949	rab11ba	100	92.202	Monopterus_albus
ENSRNOG00000007648	Rab11b	100	100.000	MGP_CAROLIEiJ_G0021415	Rab11b	100	100.000	Mus_caroli
ENSRNOG00000007648	Rab11b	100	99.083	ENSMUSG00000077450	Rab11b	100	99.083	Mus_musculus
ENSRNOG00000007648	Rab11b	100	100.000	MGP_PahariEiJ_G0020420	Rab11b	100	100.000	Mus_pahari
ENSRNOG00000007648	Rab11b	100	100.000	MGP_SPRETEiJ_G0022327	Rab11b	100	100.000	Mus_spretus
ENSRNOG00000007648	Rab11b	100	99.541	ENSMPUG00000007263	RAB11B	100	99.541	Mustela_putorius_furo
ENSRNOG00000007648	Rab11b	100	95.475	ENSMLUG00000002308	-	100	95.475	Myotis_lucifugus
ENSRNOG00000007648	Rab11b	100	100.000	ENSNGAG00000015757	Rab11b	100	100.000	Nannospalax_galili
ENSRNOG00000007648	Rab11b	100	93.578	ENSNBRG00000023898	rab11ba	84	93.578	Neolamprologus_brichardi
ENSRNOG00000007648	Rab11b	100	100.000	ENSNLEG00000001733	RAB11B	100	100.000	Nomascus_leucogenys
ENSRNOG00000007648	Rab11b	100	100.000	ENSODEG00000011371	RAB11B	100	100.000	Octodon_degus
ENSRNOG00000007648	Rab11b	100	94.037	ENSONIG00000002535	rab11ba	100	94.037	Oreochromis_niloticus
ENSRNOG00000007648	Rab11b	74	98.137	ENSOCUG00000028208	RAB11B	64	98.137	Oryctolagus_cuniculus
ENSRNOG00000007648	Rab11b	99	95.853	ENSORLG00000015307	rab11ba	99	95.853	Oryzias_latipes
ENSRNOG00000007648	Rab11b	99	95.853	ENSORLG00020020816	rab11ba	99	95.853	Oryzias_latipes_hni
ENSRNOG00000007648	Rab11b	99	96.296	ENSORLG00015016946	rab11ba	81	96.296	Oryzias_latipes_hsok
ENSRNOG00000007648	Rab11b	99	95.853	ENSOMEG00000002581	rab11ba	99	95.853	Oryzias_melastigma
ENSRNOG00000007648	Rab11b	100	100.000	ENSOGAG00000003227	RAB11B	99	100.000	Otolemur_garnettii
ENSRNOG00000007648	Rab11b	100	100.000	ENSOARG00000003801	RAB11B	97	100.000	Ovis_aries
ENSRNOG00000007648	Rab11b	83	95.556	ENSPPRG00000010160	RAB11B	88	95.556	Panthera_pardus
ENSRNOG00000007648	Rab11b	100	100.000	ENSPEMG00000014536	Rab11b	100	100.000	Peromyscus_maniculatus_bairdii
ENSRNOG00000007648	Rab11b	94	80.952	ENSPMAG00000009335	-	100	80.952	Petromyzon_marinus
ENSRNOG00000007648	Rab11b	100	94.954	ENSPFOG00000006159	rab11ba	100	94.954	Poecilia_formosa
ENSRNOG00000007648	Rab11b	100	94.954	ENSPLAG00000014243	rab11ba	100	94.954	Poecilia_latipinna
ENSRNOG00000007648	Rab11b	100	94.954	ENSPMEG00000007917	rab11ba	75	94.954	Poecilia_mexicana
ENSRNOG00000007648	Rab11b	100	94.954	ENSPREG00000006357	rab11ba	78	94.954	Poecilia_reticulata
ENSRNOG00000007648	Rab11b	100	100.000	ENSPPYG00000009504	RAB11B	100	100.000	Pongo_abelii
ENSRNOG00000007648	Rab11b	100	91.284	ENSPCAG00000016118	RAB11B	100	91.284	Procavia_capensis
ENSRNOG00000007648	Rab11b	67	97.945	ENSPCOG00000008655	-	100	97.945	Propithecus_coquereli
ENSRNOG00000007648	Rab11b	100	100.000	ENSPCOG00000028053	RAB11B	100	100.000	Propithecus_coquereli
ENSRNOG00000007648	Rab11b	100	100.000	ENSPVAG00000009645	RAB11B	100	100.000	Pteropus_vampyrus
ENSRNOG00000007648	Rab11b	93	78.537	ENSPNYG00000023810	-	90	78.537	Pundamilia_nyererei
ENSRNOG00000007648	Rab11b	100	93.119	ENSPNYG00000019644	rab11ba	100	93.119	Pundamilia_nyererei
ENSRNOG00000007648	Rab11b	100	97.706	ENSPNAG00000006431	-	100	97.706	Pygocentrus_nattereri
ENSRNOG00000007648	Rab11b	100	97.248	ENSPNAG00000020475	rab11ba	100	97.248	Pygocentrus_nattereri
ENSRNOG00000007648	Rab11b	100	100.000	ENSSBOG00000035094	RAB11B	100	100.000	Saimiri_boliviensis_boliviensis
ENSRNOG00000007648	Rab11b	100	94.954	ENSSDUG00000002965	rab11ba	100	94.954	Seriola_dumerili
ENSRNOG00000007648	Rab11b	100	94.954	ENSSLDG00000005221	rab11ba	100	94.954	Seriola_lalandi_dorsalis
ENSRNOG00000007648	Rab11b	100	94.037	ENSSPAG00000017313	rab11ba	100	94.037	Stegastes_partitus
ENSRNOG00000007648	Rab11b	100	100.000	ENSSSCG00000013600	RAB11B	100	100.000	Sus_scrofa
ENSRNOG00000007648	Rab11b	59	100.000	ENSTBEG00000014750	-	100	100.000	Tupaia_belangeri
ENSRNOG00000007648	Rab11b	100	100.000	ENSTTRG00000009758	RAB11B	100	100.000	Tursiops_truncatus
ENSRNOG00000007648	Rab11b	94	80.488	ENSUMAG00000014594	RAB11B	97	80.488	Ursus_maritimus
ENSRNOG00000007648	Rab11b	100	100.000	ENSVVUG00000025210	RAB11B	100	100.000	Vulpes_vulpes
ENSRNOG00000007648	Rab11b	100	95.413	ENSXETG00000021890	rab11b.2	99	95.413	Xenopus_tropicalis
ENSRNOG00000007648	Rab11b	61	97.744	ENSXCOG00000009194	-	98	97.744	Xiphophorus_couchianus
ENSRNOG00000007648	Rab11b	100	94.495	ENSXMAG00000013416	rab11ba	100	94.495	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001881	receptor recycling	-	ISO	Process
GO:0001881	receptor recycling	-	ISS	Process
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0003924	GTPase activity	-	IEA	Function
GO:0003924	GTPase activity	-	ISO	Function
GO:0003924	GTPase activity	-	ISS	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005525	GTP binding	-	ISO	Function
GO:0005525	GTP binding	-	ISS	Function
GO:0005737	cytoplasm	-	ISO	Component
GO:0005768	endosome	21873635.	IBA	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0006887	exocytosis	21873635.	IBA	Process
GO:0006897	endocytosis	-	ISO	Process
GO:0008021	synaptic vesicle	14627637.17110340.	IDA	Component
GO:0019003	GDP binding	-	ISO	Function
GO:0019003	GDP binding	-	ISS	Function
GO:0030054	cell junction	-	IEA	Component
GO:0030670	phagocytic vesicle membrane	-	IEA	Component
GO:0031410	cytoplasmic vesicle	12051767.	IDA	Component
GO:0031489	myosin V binding	-	IEA	Function
GO:0031489	myosin V binding	-	ISO	Function
GO:0032402	melanosome transport	-	ISO	Process
GO:0032402	melanosome transport	-	ISS	Process
GO:0032482	Rab protein signal transduction	21873635.	IBA	Process
GO:0033572	transferrin transport	-	ISO	Process
GO:0033572	transferrin transport	-	ISS	Process
GO:0035773	insulin secretion involved in cellular response to glucose stimulus	-	ISO	Process
GO:0035773	insulin secretion involved in cellular response to glucose stimulus	-	ISS	Process
GO:0044070	regulation of anion transport	-	ISO	Process
GO:0044070	regulation of anion transport	-	ISS	Process
GO:0045054	constitutive secretory pathway	21873635.	IBA	Process
GO:0045054	constitutive secretory pathway	14627637.	IMP	Process
GO:0045054	constitutive secretory pathway	-	ISO	Process
GO:0045055	regulated exocytosis	21873635.	IBA	Process
GO:0045055	regulated exocytosis	14627637.	IMP	Process
GO:0045055	regulated exocytosis	-	ISO	Process
GO:0045335	phagocytic vesicle	-	ISO	Component
GO:0045335	phagocytic vesicle	-	ISS	Component
GO:0055037	recycling endosome	21873635.	IBA	Component
GO:0055037	recycling endosome	-	ISO	Component
GO:0055037	recycling endosome	-	ISS	Component
GO:0055038	recycling endosome membrane	-	IEA	Component
GO:0055038	recycling endosome membrane	-	ISO	Component
GO:0071468	cellular response to acidic pH	-	ISO	Process
GO:0071468	cellular response to acidic pH	-	ISS	Process
GO:0090150	establishment of protein localization to membrane	-	IEA	Process
GO:0090150	establishment of protein localization to membrane	-	ISO	Process
GO:0098993	anchored component of synaptic vesicle membrane	20926670.	EXP	Component
GO:0098993	anchored component of synaptic vesicle membrane	17110340.20926670.	IDA	Component
GO:0150093	amyloid-beta clearance by transcytosis	-	IEA	Process
GO:0150093	amyloid-beta clearance by transcytosis	-	ISO	Process
GO:1990126	retrograde transport, endosome to plasma membrane	-	ISO	Process
GO:1990126	retrograde transport, endosome to plasma membrane	-	ISS	Process
GO:2000008	regulation of protein localization to cell surface	-	ISO	Process
GO:2000008	regulation of protein localization to cell surface	-	ISS	Process
GO:2001135	regulation of endocytic recycling	-	ISO	Process
GO:2001135	regulation of endocytic recycling	-	ISS	Process