EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000007781 (Gene tree)
Gene ID: 84496
Gene Symbol: Stau1
Alias: MGC124588|Stau
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 45793 bases
Position: chr3:163703204-163748996
Accession: 621778
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000010633	dsrm	PF00035.26	1.6e-23	1	2
ENSRNOP00000010633	dsrm	PF00035.26	1.6e-23	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000010633	-	3073	-	ENSRNOP00000010633	495 (aa)	-	Q9ET50

Gene Model

Click here to download ENSRNOG00000007781's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000007781's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000007781	Stau1	85	45.190	ENSRNOG00000042458	AABR07046707.1	98	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000007781	Stau1	100	91.717	ENSG00000124214	STAU1	99	91.717	Homo_sapiens
ENSRNOG00000007781	Stau1	99	69.400	ENSAPOG00000017260	stau1	71	69.400	Acanthochromis_polyacanthus
ENSRNOG00000007781	Stau1	99	89.206	ENSAMEG00000013681	STAU1	69	89.206	Ailuropoda_melanoleuca
ENSRNOG00000007781	Stau1	99	70.707	ENSACIG00000015918	stau1	71	71.371	Amphilophus_citrinellus
ENSRNOG00000007781	Stau1	99	70.400	ENSAOCG00000012224	stau1	71	70.400	Amphiprion_ocellaris
ENSRNOG00000007781	Stau1	99	70.600	ENSAPEG00000012308	stau1	71	70.600	Amphiprion_percula
ENSRNOG00000007781	Stau1	99	70.624	ENSATEG00000024600	stau1	73	70.624	Anabas_testudineus
ENSRNOG00000007781	Stau1	99	84.114	ENSAPLG00000010527	STAU1	69	84.114	Anas_platyrhynchos
ENSRNOG00000007781	Stau1	99	83.943	ENSACAG00000015909	STAU1	70	83.943	Anolis_carolinensis
ENSRNOG00000007781	Stau1	100	91.717	ENSANAG00000032714	STAU1	99	85.051	Aotus_nancymaae
ENSRNOG00000007781	Stau1	99	69.800	ENSACLG00000012270	stau1	71	69.800	Astatotilapia_calliptera
ENSRNOG00000007781	Stau1	100	68.474	ENSAMXG00000016812	stau1	84	68.474	Astyanax_mexicanus
ENSRNOG00000007781	Stau1	100	89.091	ENSBTAG00000000241	STAU1	85	89.091	Bos_taurus
ENSRNOG00000007781	Stau1	100	91.515	ENSCJAG00000016233	STAU1	85	90.707	Callithrix_jacchus
ENSRNOG00000007781	Stau1	100	89.899	ENSCAFG00000011347	STAU1	83	89.899	Canis_familiaris
ENSRNOG00000007781	Stau1	100	88.645	ENSCAFG00020017123	STAU1	82	88.645	Canis_lupus_dingo
ENSRNOG00000007781	Stau1	100	89.091	ENSCHIG00000001799	-	100	82.828	Capra_hircus
ENSRNOG00000007781	Stau1	100	88.283	ENSTSYG00000036179	-	85	88.283	Carlito_syrichta
ENSRNOG00000007781	Stau1	100	87.475	ENSCAPG00000017041	STAU1	99	87.475	Cavia_aperea
ENSRNOG00000007781	Stau1	100	88.081	ENSCPOG00000005566	STAU1	100	88.081	Cavia_porcellus
ENSRNOG00000007781	Stau1	100	91.515	ENSCCAG00000034339	STAU1	85	91.515	Cebus_capucinus
ENSRNOG00000007781	Stau1	100	91.919	ENSCATG00000028474	STAU1	99	91.919	Cercocebus_atys
ENSRNOG00000007781	Stau1	100	92.121	ENSCLAG00000006516	-	100	92.121	Chinchilla_lanigera
ENSRNOG00000007781	Stau1	100	73.239	ENSCLAG00000002784	-	98	73.239	Chinchilla_lanigera
ENSRNOG00000007781	Stau1	100	90.707	ENSCSAG00000014986	STAU1	99	90.707	Chlorocebus_sabaeus
ENSRNOG00000007781	Stau1	100	89.718	ENSCHOG00000001511	STAU1	85	89.718	Choloepus_hoffmanni
ENSRNOG00000007781	Stau1	99	83.943	ENSCPBG00000026741	STAU1	71	83.943	Chrysemys_picta_bellii
ENSRNOG00000007781	Stau1	100	90.707	ENSCANG00000039220	STAU1	99	82.460	Colobus_angolensis_palliatus
ENSRNOG00000007781	Stau1	100	97.576	ENSCGRG00001013453	Stau1	100	97.576	Cricetulus_griseus_chok1gshd
ENSRNOG00000007781	Stau1	100	97.576	ENSCGRG00000007216	Stau1	100	97.576	Cricetulus_griseus_crigri
ENSRNOG00000007781	Stau1	99	64.777	ENSCSEG00000000792	stau1	68	65.524	Cynoglossus_semilaevis
ENSRNOG00000007781	Stau1	99	67.683	ENSCVAG00000005906	stau1	86	68.357	Cyprinodon_variegatus
ENSRNOG00000007781	Stau1	99	69.261	ENSDARG00000044182	stau1	78	69.261	Danio_rerio
ENSRNOG00000007781	Stau1	100	89.718	ENSDNOG00000014933	STAU1	83	89.718	Dasypus_novemcinctus
ENSRNOG00000007781	Stau1	100	88.081	ENSDORG00000030220	Stau1	100	88.081	Dipodomys_ordii
ENSRNOG00000007781	Stau1	84	90.099	ENSETEG00000018235	STAU1	72	90.099	Echinops_telfairi
ENSRNOG00000007781	Stau1	100	91.313	ENSEASG00005023343	STAU1	88	90.811	Equus_asinus_asinus
ENSRNOG00000007781	Stau1	100	90.101	ENSECAG00000012894	STAU1	85	90.101	Equus_caballus
ENSRNOG00000007781	Stau1	81	90.025	ENSEEUG00000014344	STAU1	68	90.025	Erinaceus_europaeus
ENSRNOG00000007781	Stau1	99	69.094	ENSELUG00000002529	stau1	77	69.094	Esox_lucius
ENSRNOG00000007781	Stau1	100	90.707	ENSFCAG00000001447	STAU1	99	83.636	Felis_catus
ENSRNOG00000007781	Stau1	99	81.911	ENSFALG00000012940	STAU1	70	81.911	Ficedula_albicollis
ENSRNOG00000007781	Stau1	100	91.111	ENSFDAG00000014119	-	100	91.111	Fukomys_damarensis
ENSRNOG00000007781	Stau1	99	67.814	ENSFDAG00000020837	-	98	67.814	Fukomys_damarensis
ENSRNOG00000007781	Stau1	99	69.400	ENSFHEG00000013517	stau1	85	69.556	Fundulus_heteroclitus
ENSRNOG00000007781	Stau1	99	60.078	ENSGMOG00000016850	stau1	71	60.078	Gadus_morhua
ENSRNOG00000007781	Stau1	99	84.521	ENSGALG00000004736	STAU1	70	83.740	Gallus_gallus
ENSRNOG00000007781	Stau1	99	69.539	ENSGAFG00000010437	stau1	71	69.539	Gambusia_affinis
ENSRNOG00000007781	Stau1	99	69.940	ENSGACG00000001352	stau1	72	69.661	Gasterosteus_aculeatus
ENSRNOG00000007781	Stau1	99	82.724	ENSGAGG00000009825	STAU1	70	82.724	Gopherus_agassizii
ENSRNOG00000007781	Stau1	100	91.515	ENSGGOG00000025351	STAU1	100	92.055	Gorilla_gorilla
ENSRNOG00000007781	Stau1	99	70.000	ENSHBUG00000023668	stau1	71	70.000	Haplochromis_burtoni
ENSRNOG00000007781	Stau1	100	90.909	ENSHGLG00000008730	STAU1	100	90.909	Heterocephalus_glaber_female
ENSRNOG00000007781	Stau1	100	92.121	ENSHGLG00100000098	STAU1	100	92.121	Heterocephalus_glaber_male
ENSRNOG00000007781	Stau1	99	68.209	ENSHCOG00000018461	stau1	70	68.209	Hippocampus_comes
ENSRNOG00000007781	Stau1	94	68.870	ENSIPUG00000023725	stau1	70	68.870	Ictalurus_punctatus
ENSRNOG00000007781	Stau1	100	90.909	ENSSTOG00000003634	STAU1	100	90.909	Ictidomys_tridecemlineatus
ENSRNOG00000007781	Stau1	100	90.303	ENSJJAG00000020032	Stau1	100	90.303	Jaculus_jaculus
ENSRNOG00000007781	Stau1	99	68.016	ENSKMAG00000007135	stau1	71	68.687	Kryptolebias_marmoratus
ENSRNOG00000007781	Stau1	99	67.723	ENSLBEG00000020172	stau1	71	67.723	Labrus_bergylta
ENSRNOG00000007781	Stau1	99	77.576	ENSLACG00000016157	STAU1	70	76.342	Latimeria_chalumnae
ENSRNOG00000007781	Stau1	99	74.194	ENSLOCG00000003134	stau1	71	74.194	Lepisosteus_oculatus
ENSRNOG00000007781	Stau1	100	88.485	ENSLAFG00000003238	STAU1	96	88.485	Loxodonta_africana
ENSRNOG00000007781	Stau1	100	91.919	ENSMFAG00000040931	STAU1	100	94.853	Macaca_fascicularis
ENSRNOG00000007781	Stau1	100	91.919	ENSMMUG00000002302	STAU1	100	94.853	Macaca_mulatta
ENSRNOG00000007781	Stau1	100	91.919	ENSMNEG00000033821	STAU1	99	91.919	Macaca_nemestrina
ENSRNOG00000007781	Stau1	100	90.909	ENSMLEG00000031383	STAU1	85	90.909	Mandrillus_leucophaeus
ENSRNOG00000007781	Stau1	99	71.026	ENSMAMG00000017586	stau1	74	71.026	Mastacembelus_armatus
ENSRNOG00000007781	Stau1	99	69.800	ENSMZEG00005015605	stau1	71	69.800	Maylandia_zebra
ENSRNOG00000007781	Stau1	99	84.318	ENSMGAG00000004719	STAU1	69	84.318	Meleagris_gallopavo
ENSRNOG00000007781	Stau1	100	96.970	ENSMAUG00000013846	Stau1	100	96.970	Mesocricetus_auratus
ENSRNOG00000007781	Stau1	100	91.111	ENSMICG00000001995	STAU1	85	91.111	Microcebus_murinus
ENSRNOG00000007781	Stau1	100	97.778	ENSMOCG00000018743	Stau1	100	97.778	Microtus_ochrogaster
ENSRNOG00000007781	Stau1	100	68.347	ENSMMOG00000015455	stau1	98	68.813	Mola_mola
ENSRNOG00000007781	Stau1	100	86.667	ENSMODG00000016276	STAU1	73	86.667	Monodelphis_domestica
ENSRNOG00000007781	Stau1	99	70.400	ENSMALG00000000045	stau1	71	70.400	Monopterus_albus
ENSRNOG00000007781	Stau1	100	98.990	MGP_CAROLIEiJ_G0024699	Stau1	100	98.990	Mus_caroli
ENSRNOG00000007781	Stau1	100	98.586	ENSMUSG00000039536	Stau1	100	98.586	Mus_musculus
ENSRNOG00000007781	Stau1	100	98.990	MGP_PahariEiJ_G0026141	Stau1	100	98.990	Mus_pahari
ENSRNOG00000007781	Stau1	100	98.182	MGP_SPRETEiJ_G0025619	Stau1	100	98.182	Mus_spretus
ENSRNOG00000007781	Stau1	99	90.224	ENSMPUG00000017581	STAU1	72	90.224	Mustela_putorius_furo
ENSRNOG00000007781	Stau1	100	88.889	ENSMLUG00000008407	STAU1	83	88.889	Myotis_lucifugus
ENSRNOG00000007781	Stau1	100	93.737	ENSNGAG00000007108	Stau1	100	93.737	Nannospalax_galili
ENSRNOG00000007781	Stau1	99	70.000	ENSNBRG00000017596	stau1	71	70.000	Neolamprologus_brichardi
ENSRNOG00000007781	Stau1	100	91.111	ENSNLEG00000006955	STAU1	99	91.111	Nomascus_leucogenys
ENSRNOG00000007781	Stau1	95	86.966	ENSMEUG00000003263	STAU1	80	86.966	Notamacropus_eugenii
ENSRNOG00000007781	Stau1	100	88.508	ENSOPRG00000014569	STAU1	86	88.508	Ochotona_princeps
ENSRNOG00000007781	Stau1	100	90.101	ENSODEG00000006523	STAU1	99	90.707	Octodon_degus
ENSRNOG00000007781	Stau1	99	70.200	ENSONIG00000004152	stau1	68	70.200	Oreochromis_niloticus
ENSRNOG00000007781	Stau1	99	83.537	ENSOANG00000006394	STAU1	70	83.537	Ornithorhynchus_anatinus
ENSRNOG00000007781	Stau1	100	88.687	ENSOCUG00000006214	STAU1	85	88.687	Oryctolagus_cuniculus
ENSRNOG00000007781	Stau1	99	68.474	ENSOMEG00000002388	stau1	71	68.474	Oryzias_melastigma
ENSRNOG00000007781	Stau1	100	90.505	ENSOGAG00000002127	STAU1	83	90.505	Otolemur_garnettii
ENSRNOG00000007781	Stau1	100	61.829	ENSOGAG00000028222	-	98	61.829	Otolemur_garnettii
ENSRNOG00000007781	Stau1	100	89.091	ENSOARG00000012204	STAU1	83	89.091	Ovis_aries
ENSRNOG00000007781	Stau1	100	91.515	ENSPPAG00000032023	STAU1	100	92.055	Pan_paniscus
ENSRNOG00000007781	Stau1	100	90.707	ENSPPRG00000003436	STAU1	99	90.707	Panthera_pardus
ENSRNOG00000007781	Stau1	100	90.707	ENSPTIG00000011768	STAU1	99	89.442	Panthera_tigris_altaica
ENSRNOG00000007781	Stau1	100	91.515	ENSPTRG00000023130	STAU1	100	92.055	Pan_troglodytes
ENSRNOG00000007781	Stau1	100	90.707	ENSPANG00000020560	STAU1	99	86.089	Papio_anubis
ENSRNOG00000007781	Stau1	99	70.800	ENSPKIG00000024588	stau1	71	70.800	Paramormyrops_kingsleyae
ENSRNOG00000007781	Stau1	99	82.520	ENSPSIG00000010731	STAU1	70	82.520	Pelodiscus_sinensis
ENSRNOG00000007781	Stau1	99	70.080	ENSPMGG00000018553	stau1	98	67.206	Periophthalmus_magnuspinnatus
ENSRNOG00000007781	Stau1	100	97.576	ENSPEMG00000022045	Stau1	100	97.576	Peromyscus_maniculatus_bairdii
ENSRNOG00000007781	Stau1	100	87.475	ENSPCIG00000023269	STAU1	99	81.616	Phascolarctos_cinereus
ENSRNOG00000007781	Stau1	99	69.600	ENSPFOG00000017253	stau1	71	69.600	Poecilia_formosa
ENSRNOG00000007781	Stau1	63	63.376	ENSPLAG00000014829	stau1	77	64.968	Poecilia_latipinna
ENSRNOG00000007781	Stau1	93	68.590	ENSPMEG00000007495	stau1	67	68.590	Poecilia_mexicana
ENSRNOG00000007781	Stau1	99	69.000	ENSPREG00000003477	stau1	71	69.000	Poecilia_reticulata
ENSRNOG00000007781	Stau1	100	90.101	ENSPPYG00000011111	STAU1	85	90.101	Pongo_abelii
ENSRNOG00000007781	Stau1	93	80.303	ENSPCAG00000002459	STAU1	84	80.303	Procavia_capensis
ENSRNOG00000007781	Stau1	100	90.909	ENSPCOG00000027746	STAU1	99	90.909	Propithecus_coquereli
ENSRNOG00000007781	Stau1	83	92.739	ENSPVAG00000015019	STAU1	71	92.739	Pteropus_vampyrus
ENSRNOG00000007781	Stau1	99	70.000	ENSPNYG00000014436	stau1	71	70.000	Pundamilia_nyererei
ENSRNOG00000007781	Stau1	99	68.600	ENSPNAG00000011323	stau1	76	68.600	Pygocentrus_nattereri
ENSRNOG00000007781	Stau1	100	91.919	ENSRBIG00000037345	STAU1	99	91.919	Rhinopithecus_bieti
ENSRNOG00000007781	Stau1	100	90.909	ENSRROG00000039008	STAU1	99	90.707	Rhinopithecus_roxellana
ENSRNOG00000007781	Stau1	100	91.515	ENSSBOG00000034448	STAU1	99	87.273	Saimiri_boliviensis_boliviensis
ENSRNOG00000007781	Stau1	100	86.667	ENSSHAG00000009492	STAU1	83	86.667	Sarcophilus_harrisii
ENSRNOG00000007781	Stau1	99	72.984	ENSSFOG00015021497	stau1	85	69.961	Scleropages_formosus
ENSRNOG00000007781	Stau1	99	70.600	ENSSMAG00000017410	stau1	71	70.600	Scophthalmus_maximus
ENSRNOG00000007781	Stau1	99	71.200	ENSSDUG00000019439	stau1	71	71.200	Seriola_dumerili
ENSRNOG00000007781	Stau1	99	71.200	ENSSLDG00000025040	stau1	71	71.200	Seriola_lalandi_dorsalis
ENSRNOG00000007781	Stau1	99	82.927	ENSSPUG00000017983	STAU1	73	83.061	Sphenodon_punctatus
ENSRNOG00000007781	Stau1	99	70.600	ENSSPAG00000019275	stau1	71	70.600	Stegastes_partitus
ENSRNOG00000007781	Stau1	100	89.495	ENSSSCG00000027444	STAU1	99	89.495	Sus_scrofa
ENSRNOG00000007781	Stau1	99	83.943	ENSTGUG00000008784	STAU1	69	84.114	Taeniopygia_guttata
ENSRNOG00000007781	Stau1	99	70.505	ENSTRUG00000005837	stau1	70	71.169	Takifugu_rubripes
ENSRNOG00000007781	Stau1	99	69.000	ENSTNIG00000014732	stau1	73	69.000	Tetraodon_nigroviridis
ENSRNOG00000007781	Stau1	100	76.411	ENSTBEG00000009404	STAU1	85	76.411	Tupaia_belangeri
ENSRNOG00000007781	Stau1	95	85.897	ENSTTRG00000004285	STAU1	80	85.897	Tursiops_truncatus
ENSRNOG00000007781	Stau1	100	88.048	ENSUAMG00000025449	STAU1	99	88.048	Ursus_americanus
ENSRNOG00000007781	Stau1	75	86.207	ENSUMAG00000024475	STAU1	87	86.207	Ursus_maritimus
ENSRNOG00000007781	Stau1	100	89.091	ENSVPAG00000001313	STAU1	85	89.091	Vicugna_pacos
ENSRNOG00000007781	Stau1	100	88.845	ENSVVUG00000022325	STAU1	73	88.845	Vulpes_vulpes
ENSRNOG00000007781	Stau1	99	76.220	ENSXETG00000001783	stau1	70	76.423	Xenopus_tropicalis
ENSRNOG00000007781	Stau1	55	64.964	ENSXCOG00000008804	stau1	72	65.172	Xiphophorus_couchianus
ENSRNOG00000007781	Stau1	99	69.539	ENSXMAG00000016175	stau1	71	69.539	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	ISO	Function
GO:0003725	double-stranded RNA binding	11145988.	IDA	Function
GO:0005737	cytoplasm	12065664.	IDA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005783	endoplasmic reticulum	-	IEA	Component
GO:0005783	endoplasmic reticulum	-	ISO	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005886	plasma membrane	-	IEA	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0008157	protein phosphatase 1 binding	12065664.	IPI	Function
GO:0008298	intracellular mRNA localization	-	ISO	Process
GO:0010494	cytoplasmic stress granule	-	ISO	Component
GO:0030425	dendrite	-	IEA	Component
GO:0030425	dendrite	-	ISO	Component
GO:0034599	cellular response to oxidative stress	15525674.	IEP	Process
GO:0036464	cytoplasmic ribonucleoprotein granule	-	IEA	Component
GO:0036464	cytoplasmic ribonucleoprotein granule	-	ISO	Component
GO:0043005	neuron projection	12065664.	IDA	Component
GO:0043025	neuronal cell body	12065664.	IDA	Component
GO:0044297	cell body	-	ISO	Component
GO:0045070	positive regulation of viral genome replication	-	IEA	Process
GO:0045070	positive regulation of viral genome replication	-	ISO	Process
GO:0046726	positive regulation by virus of viral protein levels in host cell	-	IEA	Process
GO:0046726	positive regulation by virus of viral protein levels in host cell	-	ISO	Process
GO:0050804	modulation of chemical synaptic transmission	21635779.	IDA	Process
GO:0050804	modulation of chemical synaptic transmission	21635779.	IMP	Process
GO:0098963	dendritic transport of messenger ribonucleoprotein complex	-	ISO	Process
GO:0098978	glutamatergic synapse	21635779.	IDA	Component
GO:0098978	glutamatergic synapse	21635779.	IMP	Component
GO:0099010	modification of postsynaptic structure	21635779.	IDA	Process
GO:0099010	modification of postsynaptic structure	21635779.	IMP	Process
GO:1900273	positive regulation of long-term synaptic potentiation	21508097.	IMP	Process
GO:1990904	ribonucleoprotein complex	-	ISO	Component