EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000007801 (Gene tree)
Gene ID: 362894
Gene Symbol: R3hdm2
Alias: LOC362894|RGD1310066
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 108172 bases
Position: chr7:70697050-70805221
Accession: 1310066
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000046983	R3H	PF01424.22	3.3e-10	1	1
ENSRNOP00000073015	R3H	PF01424.22	3.3e-10	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000045964	-	3726	XM_006241481	ENSRNOP00000046983	993 (aa)	XP_006241544	G3V9G7
ENSRNOT00000090001	-	3370	XM_006241469	ENSRNOP00000073015	1045 (aa)	XP_006241531	A0A0G2K4E8

Gene Model

Click here to download ENSRNOG00000007801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000007801's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000007801	R3hdm2	62	54.315	ENSRNOG00000008919	Arpp21	91	46.381
ENSRNOG00000007801	R3hdm2	95	58.537	ENSRNOG00000004099	R3hdm1	99	44.397

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000007801	R3hdm2	100	94.260	ENSG00000179912	R3HDM2	100	100.000	Homo_sapiens
ENSRNOG00000007801	R3hdm2	99	64.738	ENSAPOG00000020341	r3hdm2	95	66.635	Acanthochromis_polyacanthus
ENSRNOG00000007801	R3hdm2	56	38.063	ENSAPOG00000021873	-	83	38.412	Acanthochromis_polyacanthus
ENSRNOG00000007801	R3hdm2	100	93.034	ENSAMEG00000004812	R3HDM2	100	93.607	Ailuropoda_melanoleuca
ENSRNOG00000007801	R3hdm2	93	64.414	ENSACIG00000016146	r3hdm2	98	64.625	Amphilophus_citrinellus
ENSRNOG00000007801	R3hdm2	99	64.646	ENSAOCG00000023694	r3hdm2	95	66.538	Amphiprion_ocellaris
ENSRNOG00000007801	R3hdm2	60	39.626	ENSAPEG00000014325	-	85	38.547	Amphiprion_percula
ENSRNOG00000007801	R3hdm2	99	64.127	ENSAPEG00000008851	r3hdm2	100	65.250	Amphiprion_percula
ENSRNOG00000007801	R3hdm2	99	63.148	ENSATEG00000025024	r3hdm2	100	67.259	Anabas_testudineus
ENSRNOG00000007801	R3hdm2	100	86.241	ENSAPLG00000004298	R3HDM2	94	82.396	Anas_platyrhynchos
ENSRNOG00000007801	R3hdm2	100	80.588	ENSACAG00000006388	R3HDM2	100	80.882	Anolis_carolinensis
ENSRNOG00000007801	R3hdm2	98	89.517	ENSANAG00000031310	-	100	89.517	Aotus_nancymaae
ENSRNOG00000007801	R3hdm2	100	94.058	ENSANAG00000025397	-	100	94.058	Aotus_nancymaae
ENSRNOG00000007801	R3hdm2	99	64.029	ENSACLG00000019106	r3hdm2	95	66.795	Astatotilapia_calliptera
ENSRNOG00000007801	R3hdm2	88	69.496	ENSAMXG00000017180	r3hdm2	99	60.041	Astyanax_mexicanus
ENSRNOG00000007801	R3hdm2	100	93.656	ENSBTAG00000018361	R3HDM2	100	93.656	Bos_taurus
ENSRNOG00000007801	R3hdm2	100	93.756	ENSCJAG00000007365	R3HDM2	100	93.756	Callithrix_jacchus
ENSRNOG00000007801	R3hdm2	100	93.173	ENSCAFG00000000215	R3HDM2	100	93.373	Canis_familiaris
ENSRNOG00000007801	R3hdm2	100	92.649	ENSCAFG00020023713	R3HDM2	100	93.454	Canis_lupus_dingo
ENSRNOG00000007801	R3hdm2	100	93.353	ENSCHIG00000014022	R3HDM2	100	93.353	Capra_hircus
ENSRNOG00000007801	R3hdm2	100	91.876	ENSTSYG00000001449	R3HDM2	100	92.778	Carlito_syrichta
ENSRNOG00000007801	R3hdm2	100	91.675	ENSCPOG00000009217	R3HDM2	100	91.675	Cavia_porcellus
ENSRNOG00000007801	R3hdm2	89	93.750	ENSCCAG00000026083	R3HDM2	100	93.750	Cebus_capucinus
ENSRNOG00000007801	R3hdm2	100	94.058	ENSCATG00000036929	R3HDM2	100	94.058	Cercocebus_atys
ENSRNOG00000007801	R3hdm2	100	93.403	ENSCLAG00000011997	R3HDM2	100	93.403	Chinchilla_lanigera
ENSRNOG00000007801	R3hdm2	100	92.741	ENSCSAG00000004911	R3HDM2	100	92.741	Chlorocebus_sabaeus
ENSRNOG00000007801	R3hdm2	76	89.243	ENSCHOG00000005636	R3HDM2	91	90.239	Choloepus_hoffmanni
ENSRNOG00000007801	R3hdm2	100	79.628	ENSCPBG00000013922	R3HDM2	100	80.558	Chrysemys_picta_bellii
ENSRNOG00000007801	R3hdm2	100	93.857	ENSCANG00000043807	R3HDM2	100	93.857	Colobus_angolensis_palliatus
ENSRNOG00000007801	R3hdm2	100	94.769	ENSCGRG00001017324	R3hdm2	100	94.769	Cricetulus_griseus_chok1gshd
ENSRNOG00000007801	R3hdm2	100	94.264	ENSCGRG00000003862	R3hdm2	100	94.264	Cricetulus_griseus_crigri
ENSRNOG00000007801	R3hdm2	96	65.359	ENSCSEG00000010925	r3hdm2	100	63.729	Cynoglossus_semilaevis
ENSRNOG00000007801	R3hdm2	96	64.156	ENSCVAG00000009058	r3hdm2	100	62.606	Cyprinodon_variegatus
ENSRNOG00000007801	R3hdm2	93	63.270	ENSDARG00000102610	r3hdm2	99	64.581	Danio_rerio
ENSRNOG00000007801	R3hdm2	100	91.635	ENSDNOG00000015033	R3HDM2	100	93.668	Dasypus_novemcinctus
ENSRNOG00000007801	R3hdm2	94	88.796	ENSDORG00000011462	R3hdm2	99	88.796	Dipodomys_ordii
ENSRNOG00000007801	R3hdm2	100	93.876	ENSEASG00005007091	R3HDM2	100	93.876	Equus_asinus_asinus
ENSRNOG00000007801	R3hdm2	100	93.684	ENSECAG00000003157	R3HDM2	100	93.684	Equus_caballus
ENSRNOG00000007801	R3hdm2	98	62.420	ENSELUG00000015969	r3hdm2	100	60.356	Esox_lucius
ENSRNOG00000007801	R3hdm2	100	93.493	ENSFCAG00000000192	R3HDM2	99	93.268	Felis_catus
ENSRNOG00000007801	R3hdm2	89	77.419	ENSFALG00000000255	R3HDM2	100	75.604	Ficedula_albicollis
ENSRNOG00000007801	R3hdm2	100	92.939	ENSFDAG00000019385	R3HDM2	100	93.130	Fukomys_damarensis
ENSRNOG00000007801	R3hdm2	99	61.566	ENSFHEG00000016484	r3hdm2	99	63.678	Fundulus_heteroclitus
ENSRNOG00000007801	R3hdm2	55	37.252	ENSFHEG00000007936	-	86	35.910	Fundulus_heteroclitus
ENSRNOG00000007801	R3hdm2	95	64.447	ENSGMOG00000007961	r3hdm2	100	63.761	Gadus_morhua
ENSRNOG00000007801	R3hdm2	100	78.636	ENSGALG00000043736	R3HDM2	100	77.395	Gallus_gallus
ENSRNOG00000007801	R3hdm2	62	36.556	ENSGAFG00000015558	-	88	35.320	Gambusia_affinis
ENSRNOG00000007801	R3hdm2	99	64.107	ENSGAFG00000013887	r3hdm2	100	63.082	Gambusia_affinis
ENSRNOG00000007801	R3hdm2	95	66.080	ENSGACG00000006442	r3hdm2	100	67.255	Gasterosteus_aculeatus
ENSRNOG00000007801	R3hdm2	100	79.628	ENSGAGG00000017797	R3HDM2	100	80.450	Gopherus_agassizii
ENSRNOG00000007801	R3hdm2	100	94.159	ENSGGOG00000015007	R3HDM2	100	94.159	Gorilla_gorilla
ENSRNOG00000007801	R3hdm2	88	85.649	ENSHGLG00000010421	-	97	85.649	Heterocephalus_glaber_female
ENSRNOG00000007801	R3hdm2	100	93.301	ENSHGLG00000010434	-	100	93.301	Heterocephalus_glaber_female
ENSRNOG00000007801	R3hdm2	96	81.695	ENSHGLG00100018871	-	99	82.334	Heterocephalus_glaber_male
ENSRNOG00000007801	R3hdm2	100	93.206	ENSHGLG00100004183	-	100	93.206	Heterocephalus_glaber_male
ENSRNOG00000007801	R3hdm2	99	62.647	ENSHCOG00000001142	r3hdm2	92	65.078	Hippocampus_comes
ENSRNOG00000007801	R3hdm2	99	60.589	ENSIPUG00000023873	r3hdm2	99	61.895	Ictalurus_punctatus
ENSRNOG00000007801	R3hdm2	100	89.034	ENSSTOG00000013424	R3HDM2	100	89.940	Ictidomys_tridecemlineatus
ENSRNOG00000007801	R3hdm2	100	93.301	ENSJJAG00000010001	R3hdm2	100	93.780	Jaculus_jaculus
ENSRNOG00000007801	R3hdm2	96	65.455	ENSKMAG00000012695	r3hdm2	99	66.421	Kryptolebias_marmoratus
ENSRNOG00000007801	R3hdm2	99	63.937	ENSLBEG00000013115	r3hdm2	92	65.865	Labrus_bergylta
ENSRNOG00000007801	R3hdm2	95	72.144	ENSLACG00000019064	r3hdm2	100	72.044	Latimeria_chalumnae
ENSRNOG00000007801	R3hdm2	100	69.745	ENSLOCG00000005976	r3hdm2	100	70.600	Lepisosteus_oculatus
ENSRNOG00000007801	R3hdm2	100	92.727	ENSLAFG00000006510	R3HDM2	100	92.727	Loxodonta_africana
ENSRNOG00000007801	R3hdm2	100	94.260	ENSMFAG00000036385	R3HDM2	100	94.260	Macaca_fascicularis
ENSRNOG00000007801	R3hdm2	100	94.545	ENSMMUG00000021789	R3HDM2	100	94.545	Macaca_mulatta
ENSRNOG00000007801	R3hdm2	100	94.361	ENSMNEG00000025314	R3HDM2	100	94.361	Macaca_nemestrina
ENSRNOG00000007801	R3hdm2	100	94.159	ENSMLEG00000028915	R3HDM2	100	94.159	Mandrillus_leucophaeus
ENSRNOG00000007801	R3hdm2	99	63.495	ENSMAMG00000009793	r3hdm2	95	65.643	Mastacembelus_armatus
ENSRNOG00000007801	R3hdm2	99	64.029	ENSMZEG00005007319	r3hdm2	95	66.795	Maylandia_zebra
ENSRNOG00000007801	R3hdm2	100	93.675	ENSMICG00000012389	R3HDM2	100	93.675	Microcebus_murinus
ENSRNOG00000007801	R3hdm2	100	94.545	ENSMOCG00000014425	R3hdm2	100	94.545	Microtus_ochrogaster
ENSRNOG00000007801	R3hdm2	95	64.614	ENSMMOG00000007448	r3hdm2	99	64.405	Mola_mola
ENSRNOG00000007801	R3hdm2	95	59.645	ENSMALG00000010211	r3hdm2	97	67.147	Monopterus_albus
ENSRNOG00000007801	R3hdm2	100	97.132	MGP_CAROLIEiJ_G0015896	R3hdm2	100	97.132	Mus_caroli
ENSRNOG00000007801	R3hdm2	100	97.321	ENSMUSG00000025404	R3hdm2	100	97.321	Mus_musculus
ENSRNOG00000007801	R3hdm2	100	96.938	MGP_PahariEiJ_G0031189	R3hdm2	100	96.938	Mus_pahari
ENSRNOG00000007801	R3hdm2	100	96.944	MGP_SPRETEiJ_G0016722	R3hdm2	100	96.944	Mus_spretus
ENSRNOG00000007801	R3hdm2	98	92.031	ENSMPUG00000001818	R3HDM2	97	92.225	Mustela_putorius_furo
ENSRNOG00000007801	R3hdm2	100	93.014	ENSMLUG00000004980	R3HDM2	100	93.014	Myotis_lucifugus
ENSRNOG00000007801	R3hdm2	100	94.641	ENSNGAG00000018800	R3hdm2	100	94.641	Nannospalax_galili
ENSRNOG00000007801	R3hdm2	94	63.598	ENSNBRG00000004483	r3hdm2	99	64.854	Neolamprologus_brichardi
ENSRNOG00000007801	R3hdm2	100	93.958	ENSNLEG00000017351	R3HDM2	100	93.958	Nomascus_leucogenys
ENSRNOG00000007801	R3hdm2	99	79.847	ENSMEUG00000008588	R3HDM2	100	79.847	Notamacropus_eugenii
ENSRNOG00000007801	R3hdm2	100	81.602	ENSOPRG00000013670	R3HDM2	100	81.602	Ochotona_princeps
ENSRNOG00000007801	R3hdm2	99	64.567	ENSONIG00000005075	r3hdm2	95	67.562	Oreochromis_niloticus
ENSRNOG00000007801	R3hdm2	100	93.232	ENSOCUG00000013258	R3HDM2	100	93.232	Oryctolagus_cuniculus
ENSRNOG00000007801	R3hdm2	99	63.401	ENSORLG00000005502	r3hdm2	95	65.700	Oryzias_latipes
ENSRNOG00000007801	R3hdm2	99	63.216	ENSORLG00020017069	r3hdm2	95	65.507	Oryzias_latipes_hni
ENSRNOG00000007801	R3hdm2	99	63.309	ENSORLG00015012735	r3hdm2	95	65.604	Oryzias_latipes_hsok
ENSRNOG00000007801	R3hdm2	99	58.899	ENSOMEG00000018079	r3hdm2	99	59.862	Oryzias_melastigma
ENSRNOG00000007801	R3hdm2	96	80.396	ENSOGAG00000027966	-	99	79.731	Otolemur_garnettii
ENSRNOG00000007801	R3hdm2	100	91.005	ENSOGAG00000012055	R3HDM2	100	91.005	Otolemur_garnettii
ENSRNOG00000007801	R3hdm2	100	92.871	ENSOARG00000006929	R3HDM2	100	92.871	Ovis_aries
ENSRNOG00000007801	R3hdm2	100	94.260	ENSPPAG00000034395	R3HDM2	100	94.260	Pan_paniscus
ENSRNOG00000007801	R3hdm2	100	93.253	ENSPPRG00000009240	R3HDM2	100	93.454	Panthera_pardus
ENSRNOG00000007801	R3hdm2	100	93.253	ENSPTIG00000008752	R3HDM2	100	93.454	Panthera_tigris_altaica
ENSRNOG00000007801	R3hdm2	100	94.361	ENSPTRG00000046457	R3HDM2	100	94.361	Pan_troglodytes
ENSRNOG00000007801	R3hdm2	98	92.821	ENSPANG00000024002	R3HDM2	100	92.718	Papio_anubis
ENSRNOG00000007801	R3hdm2	99	64.750	ENSPKIG00000003171	r3hdm2	95	66.798	Paramormyrops_kingsleyae
ENSRNOG00000007801	R3hdm2	63	71.831	ENSPSIG00000006954	R3HDM2	100	72.613	Pelodiscus_sinensis
ENSRNOG00000007801	R3hdm2	93	67.201	ENSPMGG00000007061	r3hdm2	99	66.987	Periophthalmus_magnuspinnatus
ENSRNOG00000007801	R3hdm2	100	94.073	ENSPEMG00000015964	R3hdm2	100	94.073	Peromyscus_maniculatus_bairdii
ENSRNOG00000007801	R3hdm2	100	88.554	ENSPCIG00000023841	R3HDM2	100	88.554	Phascolarctos_cinereus
ENSRNOG00000007801	R3hdm2	94	73.199	ENSPFOG00000006077	r3hdm2	95	75.216	Poecilia_formosa
ENSRNOG00000007801	R3hdm2	99	62.816	ENSPLAG00000002971	r3hdm2	99	62.642	Poecilia_latipinna
ENSRNOG00000007801	R3hdm2	55	37.396	ENSPLAG00000006973	-	69	39.496	Poecilia_latipinna
ENSRNOG00000007801	R3hdm2	99	62.816	ENSPMEG00000005330	r3hdm2	99	62.642	Poecilia_mexicana
ENSRNOG00000007801	R3hdm2	55	37.730	ENSPMEG00000014457	-	86	37.134	Poecilia_mexicana
ENSRNOG00000007801	R3hdm2	99	63.401	ENSPREG00000008424	r3hdm2	100	61.197	Poecilia_reticulata
ENSRNOG00000007801	R3hdm2	98	86.364	ENSPPYG00000004685	R3HDM2	81	86.364	Pongo_abelii
ENSRNOG00000007801	R3hdm2	95	84.747	ENSPCAG00000014642	R3HDM2	100	85.556	Procavia_capensis
ENSRNOG00000007801	R3hdm2	100	93.656	ENSPCOG00000013201	R3HDM2	100	93.656	Propithecus_coquereli
ENSRNOG00000007801	R3hdm2	100	93.397	ENSPVAG00000003967	R3HDM2	100	93.397	Pteropus_vampyrus
ENSRNOG00000007801	R3hdm2	94	64.092	ENSPNYG00000013479	r3hdm2	100	65.136	Pundamilia_nyererei
ENSRNOG00000007801	R3hdm2	99	63.670	ENSPNAG00000017473	r3hdm2	99	64.174	Pygocentrus_nattereri
ENSRNOG00000007801	R3hdm2	100	91.541	ENSRBIG00000037403	R3HDM2	100	91.541	Rhinopithecus_bieti
ENSRNOG00000007801	R3hdm2	100	94.450	ENSRROG00000022271	R3HDM2	100	94.159	Rhinopithecus_roxellana
ENSRNOG00000007801	R3hdm2	100	94.058	ENSSBOG00000023547	R3HDM2	100	94.058	Saimiri_boliviensis_boliviensis
ENSRNOG00000007801	R3hdm2	100	85.551	ENSSHAG00000003511	R3HDM2	99	89.015	Sarcophilus_harrisii
ENSRNOG00000007801	R3hdm2	94	68.611	ENSSFOG00015011219	r3hdm2	99	67.812	Scleropages_formosus
ENSRNOG00000007801	R3hdm2	99	63.848	ENSSMAG00000012073	r3hdm2	100	64.167	Scophthalmus_maximus
ENSRNOG00000007801	R3hdm2	99	64.597	ENSSDUG00000019269	r3hdm2	100	63.514	Seriola_dumerili
ENSRNOG00000007801	R3hdm2	99	65.310	ENSSLDG00000005252	r3hdm2	100	64.188	Seriola_lalandi_dorsalis
ENSRNOG00000007801	R3hdm2	93	86.924	ENSSARG00000003958	R3HDM2	94	86.924	Sorex_araneus
ENSRNOG00000007801	R3hdm2	100	77.282	ENSSPUG00000014132	R3HDM2	100	77.476	Sphenodon_punctatus
ENSRNOG00000007801	R3hdm2	99	63.900	ENSSPAG00000022594	r3hdm2	100	65.287	Stegastes_partitus
ENSRNOG00000007801	R3hdm2	54	36.606	ENSSPAG00000016856	-	86	36.677	Stegastes_partitus
ENSRNOG00000007801	R3hdm2	100	93.756	ENSSSCG00000026498	R3HDM2	100	94.064	Sus_scrofa
ENSRNOG00000007801	R3hdm2	73	80.364	ENSTGUG00000015881	R3HDM2	100	80.078	Taeniopygia_guttata
ENSRNOG00000007801	R3hdm2	95	61.744	ENSTRUG00000015075	r3hdm2	99	63.207	Takifugu_rubripes
ENSRNOG00000007801	R3hdm2	87	80.172	ENSTNIG00000007057	r3hdm2	87	76.437	Tetraodon_nigroviridis
ENSRNOG00000007801	R3hdm2	81	93.907	ENSTBEG00000015967	R3HDM2	81	93.907	Tupaia_belangeri
ENSRNOG00000007801	R3hdm2	96	87.179	ENSTTRG00000013082	R3HDM2	93	87.607	Tursiops_truncatus
ENSRNOG00000007801	R3hdm2	100	93.152	ENSUAMG00000020913	R3HDM2	100	92.249	Ursus_americanus
ENSRNOG00000007801	R3hdm2	100	88.040	ENSUMAG00000019179	R3HDM2	100	89.246	Ursus_maritimus
ENSRNOG00000007801	R3hdm2	100	87.560	ENSVPAG00000008656	R3HDM2	100	87.560	Vicugna_pacos
ENSRNOG00000007801	R3hdm2	98	93.275	ENSVVUG00000018014	R3HDM2	97	93.470	Vulpes_vulpes
ENSRNOG00000007801	R3hdm2	100	72.633	ENSXETG00000017153	r3hdm2	100	72.573	Xenopus_tropicalis
ENSRNOG00000007801	R3hdm2	86	61.702	ENSXCOG00000013882	r3hdm2	100	62.640	Xiphophorus_couchianus
ENSRNOG00000007801	R3hdm2	99	63.586	ENSXMAG00000017978	r3hdm2	100	62.864	Xiphophorus_maculatus
ENSRNOG00000007801	R3hdm2	62	36.556	ENSXMAG00000002994	-	88	35.171	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function