EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000007829 (Gene tree)
Gene ID: 297768
Gene Symbol: Lactb2
Alias: LOC297768|MGC112672
Full Name: lactamase%2C beta 2
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 22762 bases
Position: chr5:4982348-5005109
Accession: 1307876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000010369	Lactamase_B	PF00753.27	1.9e-18	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000010369	-	1201	-	ENSRNOP00000010369	288 (aa)	-	Q561R9

Gene Model

Click here to download ENSRNOG00000007829's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000007829's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000007829	Lactb2	100	82.986	ENSG00000147592	LACTB2	100	82.986	Homo_sapiens
ENSRNOG00000007829	Lactb2	100	61.856	ENSAPOG00000016229	LACTB2	100	61.856	Acanthochromis_polyacanthus
ENSRNOG00000007829	Lactb2	100	80.903	ENSAMEG00000006360	LACTB2	99	80.903	Ailuropoda_melanoleuca
ENSRNOG00000007829	Lactb2	95	63.504	ENSACIG00000021945	LACTB2	95	63.504	Amphilophus_citrinellus
ENSRNOG00000007829	Lactb2	100	61.168	ENSAOCG00000003167	LACTB2	100	61.168	Amphiprion_ocellaris
ENSRNOG00000007829	Lactb2	97	63.441	ENSAPEG00000011980	LACTB2	92	63.441	Amphiprion_percula
ENSRNOG00000007829	Lactb2	100	60.554	ENSATEG00000011667	LACTB2	100	60.554	Anabas_testudineus
ENSRNOG00000007829	Lactb2	89	64.706	ENSAPLG00000006753	LACTB2	100	64.706	Anas_platyrhynchos
ENSRNOG00000007829	Lactb2	100	68.750	ENSACAG00000014807	LACTB2	100	68.750	Anolis_carolinensis
ENSRNOG00000007829	Lactb2	100	83.333	ENSANAG00000019266	LACTB2	100	83.333	Aotus_nancymaae
ENSRNOG00000007829	Lactb2	100	61.034	ENSACLG00000000635	LACTB2	100	61.034	Astatotilapia_calliptera
ENSRNOG00000007829	Lactb2	100	65.398	ENSAMXG00000040262	LACTB2	100	65.398	Astyanax_mexicanus
ENSRNOG00000007829	Lactb2	100	79.861	ENSBTAG00000001808	LACTB2	100	79.861	Bos_taurus
ENSRNOG00000007829	Lactb2	97	47.857	WBGene00013176	Y53F4B.39	92	47.857	Caenorhabditis_elegans
ENSRNOG00000007829	Lactb2	100	83.681	ENSCJAG00000007866	LACTB2	100	83.681	Callithrix_jacchus
ENSRNOG00000007829	Lactb2	100	81.250	ENSCAFG00000007868	LACTB2	100	81.250	Canis_familiaris
ENSRNOG00000007829	Lactb2	100	81.250	ENSCAFG00020017656	LACTB2	100	81.250	Canis_lupus_dingo
ENSRNOG00000007829	Lactb2	100	81.597	ENSCHIG00000012018	LACTB2	100	81.597	Capra_hircus
ENSRNOG00000007829	Lactb2	100	81.597	ENSTSYG00000005889	LACTB2	100	81.597	Carlito_syrichta
ENSRNOG00000007829	Lactb2	86	57.085	ENSCAPG00000013960	LACTB2	100	57.085	Cavia_aperea
ENSRNOG00000007829	Lactb2	100	80.903	ENSCPOG00000007604	LACTB2	100	80.903	Cavia_porcellus
ENSRNOG00000007829	Lactb2	100	82.292	ENSCCAG00000002927	LACTB2	100	82.292	Cebus_capucinus
ENSRNOG00000007829	Lactb2	100	82.639	ENSCATG00000002031	LACTB2	100	82.639	Cercocebus_atys
ENSRNOG00000007829	Lactb2	100	80.556	ENSCLAG00000001647	LACTB2	100	80.556	Chinchilla_lanigera
ENSRNOG00000007829	Lactb2	100	82.986	ENSCSAG00000013830	LACTB2	100	82.986	Chlorocebus_sabaeus
ENSRNOG00000007829	Lactb2	86	53.441	ENSCHOG00000009051	LACTB2	100	53.441	Choloepus_hoffmanni
ENSRNOG00000007829	Lactb2	86	71.486	ENSCPBG00000009006	LACTB2	97	71.486	Chrysemys_picta_bellii
ENSRNOG00000007829	Lactb2	95	53.285	ENSCSAVG00000005968	-	96	53.285	Ciona_savignyi
ENSRNOG00000007829	Lactb2	100	82.639	ENSCANG00000021879	LACTB2	100	82.639	Colobus_angolensis_palliatus
ENSRNOG00000007829	Lactb2	100	85.172	ENSCGRG00001015034	Lactb2	100	85.172	Cricetulus_griseus_chok1gshd
ENSRNOG00000007829	Lactb2	86	85.020	ENSCGRG00000005354	Lactb2	100	85.020	Cricetulus_griseus_crigri
ENSRNOG00000007829	Lactb2	96	62.319	ENSCSEG00000021510	LACTB2	90	62.319	Cynoglossus_semilaevis
ENSRNOG00000007829	Lactb2	100	61.379	ENSCVAG00000018535	LACTB2	100	61.379	Cyprinodon_variegatus
ENSRNOG00000007829	Lactb2	100	79.861	ENSDNOG00000045238	-	99	79.861	Dasypus_novemcinctus
ENSRNOG00000007829	Lactb2	98	72.085	ENSDNOG00000046953	-	98	72.085	Dasypus_novemcinctus
ENSRNOG00000007829	Lactb2	100	84.375	ENSDORG00000003242	Lactb2	100	84.375	Dipodomys_ordii
ENSRNOG00000007829	Lactb2	94	45.985	FBgn0031987	CG12375	93	45.985	Drosophila_melanogaster
ENSRNOG00000007829	Lactb2	86	76.518	ENSETEG00000009152	LACTB2	100	76.518	Echinops_telfairi
ENSRNOG00000007829	Lactb2	100	51.736	ENSEBUG00000006690	-	100	51.557	Eptatretus_burgeri
ENSRNOG00000007829	Lactb2	100	80.556	ENSEASG00005020061	LACTB2	86	80.556	Equus_asinus_asinus
ENSRNOG00000007829	Lactb2	100	80.556	ENSECAG00000017296	LACTB2	75	80.556	Equus_caballus
ENSRNOG00000007829	Lactb2	54	78.846	ENSEEUG00000002426	-	63	78.846	Erinaceus_europaeus
ENSRNOG00000007829	Lactb2	100	60.481	ENSELUG00000009380	-	100	60.481	Esox_lucius
ENSRNOG00000007829	Lactb2	100	78.819	ENSFCAG00000014467	LACTB2	93	78.819	Felis_catus
ENSRNOG00000007829	Lactb2	100	68.056	ENSFALG00000008404	LACTB2	100	68.056	Ficedula_albicollis
ENSRNOG00000007829	Lactb2	100	79.514	ENSFDAG00000003935	LACTB2	100	79.514	Fukomys_damarensis
ENSRNOG00000007829	Lactb2	86	58.065	ENSFHEG00000004336	LACTB2	91	58.065	Fundulus_heteroclitus
ENSRNOG00000007829	Lactb2	95	58.394	ENSGMOG00000004023	LACTB2	99	59.058	Gadus_morhua
ENSRNOG00000007829	Lactb2	92	71.970	ENSGALG00000038745	LACTB2	100	71.970	Gallus_gallus
ENSRNOG00000007829	Lactb2	95	59.854	ENSGAFG00000001664	LACTB2	96	59.854	Gambusia_affinis
ENSRNOG00000007829	Lactb2	100	61.724	ENSGACG00000017561	LACTB2	100	61.724	Gasterosteus_aculeatus
ENSRNOG00000007829	Lactb2	100	69.444	ENSGAGG00000009961	LACTB2	100	69.444	Gopherus_agassizii
ENSRNOG00000007829	Lactb2	100	80.678	ENSGGOG00000000403	LACTB2	100	80.678	Gorilla_gorilla
ENSRNOG00000007829	Lactb2	100	61.034	ENSHBUG00000010128	LACTB2	100	61.034	Haplochromis_burtoni
ENSRNOG00000007829	Lactb2	95	79.562	ENSHGLG00000006207	-	100	79.562	Heterocephalus_glaber_female
ENSRNOG00000007829	Lactb2	90	72.868	ENSHGLG00000004367	-	98	72.868	Heterocephalus_glaber_female
ENSRNOG00000007829	Lactb2	100	78.819	ENSHGLG00100017540	LACTB2	100	78.819	Heterocephalus_glaber_male
ENSRNOG00000007829	Lactb2	99	59.862	ENSHCOG00000011207	LACTB2	99	59.862	Hippocampus_comes
ENSRNOG00000007829	Lactb2	100	62.847	ENSIPUG00000014168	lactb2	100	62.847	Ictalurus_punctatus
ENSRNOG00000007829	Lactb2	100	82.639	ENSSTOG00000005569	LACTB2	100	82.639	Ictidomys_tridecemlineatus
ENSRNOG00000007829	Lactb2	100	62.759	ENSKMAG00000021373	LACTB2	100	62.759	Kryptolebias_marmoratus
ENSRNOG00000007829	Lactb2	100	61.724	ENSLBEG00000004391	LACTB2	100	61.724	Labrus_bergylta
ENSRNOG00000007829	Lactb2	100	59.028	ENSLACG00000017245	LACTB2	100	59.028	Latimeria_chalumnae
ENSRNOG00000007829	Lactb2	100	69.444	ENSLOCG00000004014	LACTB2	99	69.444	Lepisosteus_oculatus
ENSRNOG00000007829	Lactb2	100	81.250	ENSLAFG00000021882	LACTB2	100	81.250	Loxodonta_africana
ENSRNOG00000007829	Lactb2	100	82.639	ENSMFAG00000033253	LACTB2	100	82.639	Macaca_fascicularis
ENSRNOG00000007829	Lactb2	100	82.639	ENSMMUG00000012513	LACTB2	100	82.639	Macaca_mulatta
ENSRNOG00000007829	Lactb2	100	82.986	ENSMNEG00000043741	LACTB2	100	82.986	Macaca_nemestrina
ENSRNOG00000007829	Lactb2	100	82.639	ENSMLEG00000029079	LACTB2	100	82.639	Mandrillus_leucophaeus
ENSRNOG00000007829	Lactb2	99	63.986	ENSMAMG00000012626	LACTB2	94	65.217	Mastacembelus_armatus
ENSRNOG00000007829	Lactb2	100	61.034	ENSMZEG00005004390	LACTB2	100	61.034	Maylandia_zebra
ENSRNOG00000007829	Lactb2	100	69.521	ENSMGAG00000011464	LACTB2	99	69.521	Meleagris_gallopavo
ENSRNOG00000007829	Lactb2	67	83.333	ENSMAUG00000018015	Lactb2	100	83.333	Mesocricetus_auratus
ENSRNOG00000007829	Lactb2	100	82.292	ENSMICG00000048059	LACTB2	100	82.292	Microcebus_murinus
ENSRNOG00000007829	Lactb2	100	87.153	ENSMOCG00000019816	Lactb2	100	87.153	Microtus_ochrogaster
ENSRNOG00000007829	Lactb2	95	63.139	ENSMMOG00000011445	LACTB2	81	63.139	Mola_mola
ENSRNOG00000007829	Lactb2	100	75.000	ENSMODG00000007297	LACTB2	100	75.000	Monodelphis_domestica
ENSRNOG00000007829	Lactb2	100	62.069	ENSMALG00000004933	LACTB2	100	62.069	Monopterus_albus
ENSRNOG00000007829	Lactb2	100	87.847	MGP_CAROLIEiJ_G0013956	Lactb2	100	87.847	Mus_caroli
ENSRNOG00000007829	Lactb2	100	89.583	ENSMUSG00000025937	Lactb2	100	89.583	Mus_musculus
ENSRNOG00000007829	Lactb2	100	89.931	MGP_PahariEiJ_G0023863	Lactb2	100	89.931	Mus_pahari
ENSRNOG00000007829	Lactb2	100	89.236	MGP_SPRETEiJ_G0014760	Lactb2	100	89.236	Mus_spretus
ENSRNOG00000007829	Lactb2	100	80.903	ENSMPUG00000010613	LACTB2	100	80.903	Mustela_putorius_furo
ENSRNOG00000007829	Lactb2	100	80.556	ENSMLUG00000017265	LACTB2	100	80.556	Myotis_lucifugus
ENSRNOG00000007829	Lactb2	100	80.137	ENSNGAG00000009316	Lactb2	100	80.137	Nannospalax_galili
ENSRNOG00000007829	Lactb2	100	61.806	ENSNBRG00000002491	LACTB2	100	61.806	Neolamprologus_brichardi
ENSRNOG00000007829	Lactb2	100	80.556	ENSNLEG00000011398	LACTB2	100	80.556	Nomascus_leucogenys
ENSRNOG00000007829	Lactb2	65	71.875	ENSMEUG00000000243	-	75	71.875	Notamacropus_eugenii
ENSRNOG00000007829	Lactb2	100	74.653	ENSOPRG00000011196	LACTB2	100	74.653	Ochotona_princeps
ENSRNOG00000007829	Lactb2	100	79.861	ENSODEG00000003774	LACTB2	100	79.861	Octodon_degus
ENSRNOG00000007829	Lactb2	100	61.034	ENSONIG00000014915	LACTB2	100	61.034	Oreochromis_niloticus
ENSRNOG00000007829	Lactb2	72	73.786	ENSOANG00000014223	LACTB2	87	73.786	Ornithorhynchus_anatinus
ENSRNOG00000007829	Lactb2	100	80.969	ENSOCUG00000008225	LACTB2	72	80.969	Oryctolagus_cuniculus
ENSRNOG00000007829	Lactb2	100	62.759	ENSORLG00000005800	LACTB2	100	62.759	Oryzias_latipes
ENSRNOG00000007829	Lactb2	100	62.414	ENSORLG00020021533	LACTB2	100	62.414	Oryzias_latipes_hni
ENSRNOG00000007829	Lactb2	100	62.414	ENSORLG00015021562	LACTB2	100	62.414	Oryzias_latipes_hsok
ENSRNOG00000007829	Lactb2	100	61.034	ENSOMEG00000018530	LACTB2	100	61.034	Oryzias_melastigma
ENSRNOG00000007829	Lactb2	100	65.188	ENSOGAG00000013510	LACTB2	100	65.188	Otolemur_garnettii
ENSRNOG00000007829	Lactb2	100	79.655	ENSOARG00000004110	LACTB2	100	79.655	Ovis_aries
ENSRNOG00000007829	Lactb2	97	83.871	ENSPPAG00000013911	LACTB2	97	83.871	Pan_paniscus
ENSRNOG00000007829	Lactb2	100	80.208	ENSPPRG00000005110	LACTB2	100	80.208	Panthera_pardus
ENSRNOG00000007829	Lactb2	91	79.848	ENSPTIG00000014134	LACTB2	100	79.848	Panthera_tigris_altaica
ENSRNOG00000007829	Lactb2	100	83.333	ENSPTRG00000020336	LACTB2	100	83.333	Pan_troglodytes
ENSRNOG00000007829	Lactb2	100	82.292	ENSPANG00000006294	LACTB2	100	82.292	Papio_anubis
ENSRNOG00000007829	Lactb2	69	68.687	ENSPKIG00000025005	LACTB2	100	68.687	Paramormyrops_kingsleyae
ENSRNOG00000007829	Lactb2	100	68.041	ENSPSIG00000018062	LACTB2	100	68.041	Pelodiscus_sinensis
ENSRNOG00000007829	Lactb2	100	62.500	ENSPMGG00000012719	LACTB2	100	62.500	Periophthalmus_magnuspinnatus
ENSRNOG00000007829	Lactb2	100	87.500	ENSPEMG00000008388	Lactb2	100	87.500	Peromyscus_maniculatus_bairdii
ENSRNOG00000007829	Lactb2	100	54.138	ENSPMAG00000006476	-	100	54.138	Petromyzon_marinus
ENSRNOG00000007829	Lactb2	100	75.000	ENSPCIG00000021119	LACTB2	95	80.808	Phascolarctos_cinereus
ENSRNOG00000007829	Lactb2	100	62.759	ENSPFOG00000010502	LACTB2	100	62.759	Poecilia_formosa
ENSRNOG00000007829	Lactb2	100	62.759	ENSPLAG00000018136	LACTB2	100	62.759	Poecilia_latipinna
ENSRNOG00000007829	Lactb2	95	64.964	ENSPMEG00000007087	LACTB2	96	64.964	Poecilia_mexicana
ENSRNOG00000007829	Lactb2	100	63.103	ENSPREG00000018933	LACTB2	100	63.103	Poecilia_reticulata
ENSRNOG00000007829	Lactb2	68	68.528	ENSPPYG00000018662	-	92	68.528	Pongo_abelii
ENSRNOG00000007829	Lactb2	100	78.125	ENSPCAG00000013020	LACTB2	100	78.125	Procavia_capensis
ENSRNOG00000007829	Lactb2	86	82.591	ENSPCOG00000022118	LACTB2	100	82.591	Propithecus_coquereli
ENSRNOG00000007829	Lactb2	100	76.736	ENSPVAG00000012794	LACTB2	100	76.736	Pteropus_vampyrus
ENSRNOG00000007829	Lactb2	100	61.379	ENSPNYG00000013281	LACTB2	100	61.379	Pundamilia_nyererei
ENSRNOG00000007829	Lactb2	100	64.583	ENSPNAG00000020026	LACTB2	100	64.583	Pygocentrus_nattereri
ENSRNOG00000007829	Lactb2	100	82.986	ENSRBIG00000037844	LACTB2	100	82.986	Rhinopithecus_bieti
ENSRNOG00000007829	Lactb2	99	83.099	ENSRROG00000032179	LACTB2	99	87.629	Rhinopithecus_roxellana
ENSRNOG00000007829	Lactb2	100	81.597	ENSSBOG00000024269	LACTB2	100	81.597	Saimiri_boliviensis_boliviensis
ENSRNOG00000007829	Lactb2	100	74.653	ENSSHAG00000013334	LACTB2	100	74.653	Sarcophilus_harrisii
ENSRNOG00000007829	Lactb2	100	64.483	ENSSFOG00015000508	lactb2	100	64.483	Scleropages_formosus
ENSRNOG00000007829	Lactb2	86	60.000	ENSSFOG00015010660	-	95	60.000	Scleropages_formosus
ENSRNOG00000007829	Lactb2	100	59.170	ENSSMAG00000006430	LACTB2	100	59.170	Scophthalmus_maximus
ENSRNOG00000007829	Lactb2	100	60.690	ENSSDUG00000007462	LACTB2	100	60.690	Seriola_dumerili
ENSRNOG00000007829	Lactb2	100	61.724	ENSSLDG00000010467	LACTB2	100	61.724	Seriola_lalandi_dorsalis
ENSRNOG00000007829	Lactb2	66	89.744	ENSSARG00000010599	-	66	89.744	Sorex_araneus
ENSRNOG00000007829	Lactb2	97	68.817	ENSSPUG00000003688	LACTB2	99	68.817	Sphenodon_punctatus
ENSRNOG00000007829	Lactb2	100	61.379	ENSSPAG00000012094	LACTB2	100	61.379	Stegastes_partitus
ENSRNOG00000007829	Lactb2	100	82.292	ENSSSCG00000006192	LACTB2	100	82.292	Sus_scrofa
ENSRNOG00000007829	Lactb2	85	68.675	ENSTGUG00000011483	LACTB2	100	68.675	Taeniopygia_guttata
ENSRNOG00000007829	Lactb2	97	63.441	ENSTRUG00000005620	LACTB2	99	63.441	Takifugu_rubripes
ENSRNOG00000007829	Lactb2	95	62.409	ENSTNIG00000007983	LACTB2	94	62.409	Tetraodon_nigroviridis
ENSRNOG00000007829	Lactb2	100	64.583	ENSTBEG00000006883	LACTB2	100	64.583	Tupaia_belangeri
ENSRNOG00000007829	Lactb2	81	78.112	ENSTTRG00000000329	LACTB2	100	78.112	Tursiops_truncatus
ENSRNOG00000007829	Lactb2	83	79.079	ENSUAMG00000006495	LACTB2	88	79.079	Ursus_americanus
ENSRNOG00000007829	Lactb2	91	79.468	ENSUMAG00000018706	LACTB2	100	79.468	Ursus_maritimus
ENSRNOG00000007829	Lactb2	100	79.861	ENSVPAG00000003787	LACTB2	100	79.861	Vicugna_pacos
ENSRNOG00000007829	Lactb2	100	81.597	ENSVVUG00000019022	LACTB2	100	81.597	Vulpes_vulpes
ENSRNOG00000007829	Lactb2	99	53.819	ENSXETG00000015953	lactb2	99	53.819	Xenopus_tropicalis
ENSRNOG00000007829	Lactb2	95	64.599	ENSXCOG00000019935	LACTB2	96	64.599	Xiphophorus_couchianus
ENSRNOG00000007829	Lactb2	100	62.759	ENSXMAG00000025965	LACTB2	100	62.759	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003727	single-stranded RNA binding	21873635.	IBA	Function
GO:0003727	single-stranded RNA binding	-	ISO	Function
GO:0003727	single-stranded RNA binding	-	ISS	Function
GO:0004521	endoribonuclease activity	21873635.	IBA	Function
GO:0004521	endoribonuclease activity	-	ISO	Function
GO:0004521	endoribonuclease activity	-	ISS	Function
GO:0005759	mitochondrial matrix	21873635.	IBA	Component
GO:0005759	mitochondrial matrix	-	ISO	Component
GO:0005759	mitochondrial matrix	-	ISS	Component
GO:0008270	zinc ion binding	-	ISO	Function
GO:0008270	zinc ion binding	-	ISS	Function
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	-	ISO	Process
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	-	ISS	Process