EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000007838 (Gene tree)
Gene ID
297685
Gene Symbol
Ddx47
Alias
LOC297685|MGC105650
Full Name
DEAD-box helicase 47
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Plus strand
Length
12620 bases
Position
chr4:168775111-168787730
Accession
1310437
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000011096ResIIIPF04851.158.4e-0611
ENSRNOP00000011096DEADPF00270.291.6e-4811
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000011096-1883XM_006237518ENSRNOP00000011096455 (aa)-G3V727
Gene Model
Click here to download ENSRNOG00000007838's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000007838's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSRNOG00000007838Ddx478332.477ENSRNOG00000013040Ddx316232.477
ENSRNOG00000007838Ddx478532.558ENSRNOG00000001815Eif4a29432.558
ENSRNOG00000007838Ddx478038.211ENSRNOG00000025430Ddx185837.150
ENSRNOG00000007838Ddx477734.759ENSRNOG00000002501Ddx3y5734.759
ENSRNOG00000007838Ddx478535.678ENSRNOG00000050868Ddx435935.678
ENSRNOG00000007838Ddx477532.955ENSRNOG00000002612Ddx525832.955
ENSRNOG00000007838Ddx477832.061ENSRNOG00000019817Ddx287232.061
ENSRNOG00000007838Ddx479036.782ENSRNOG00000009166Ddx245236.782
ENSRNOG00000007838Ddx478033.687ENSRNOG00000004373Ddx39a8833.687
ENSRNOG00000007838Ddx477338.643ENSRNOG00000030680Ddx55538.643
ENSRNOG00000007838Ddx477535.447ENSRNOG00000000841Ddx39b8534.795
ENSRNOG00000007838Ddx478531.282ENSRNOG00000030628Eif4a19631.282
ENSRNOG00000007838Ddx478133.871ENSRNOG00000042451Ddx596033.871
ENSRNOG00000007838Ddx479032.976ENSRNOG00000004670Ddx568632.766
ENSRNOG00000007838Ddx477439.769ENSRNOG00000051170Ddx175340.346
ENSRNOG00000007838Ddx477635.556ENSRNOG00000012771Ddx415835.556
ENSRNOG00000007838Ddx479346.875ENSRNOG00000006652Ddx16546.875
ENSRNOG00000007838Ddx478532.041ENSRNOG00000045791Eif4a39432.041
ENSRNOG00000007838Ddx478234.625ENSRNOG00000026686Ddx45534.447
ENSRNOG00000007838Ddx478134.103ENSRNOG00000023383Ddx3x5934.103
ENSRNOG00000007838Ddx477335.897ENSRNOG00000001043Ddx555835.897
ENSRNOG00000007838Ddx479544.695ENSRNOG00000022368Ddx499144.695
ENSRNOG00000007838Ddx477832.086ENSRNOG00000000396Ddx505431.204
ENSRNOG00000007838Ddx478233.668ENSRNOG00000057231Ddx36034.103
ENSRNOG00000007838Ddx478433.247ENSRNOG00000053932Ddx67833.247
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000007838Ddx4710096.484ENSG00000213782DDX4710096.484Homo_sapiens
ENSRNOG00000007838Ddx479484.579ENSAPOG00000021751ddx479084.332Acanthochromis_polyacanthus
ENSRNOG00000007838Ddx4710096.044ENSAMEG00000010740DDX4710096.044Ailuropoda_melanoleuca
ENSRNOG00000007838Ddx479285.167ENSACIG00000022802ddx478984.813Amphilophus_citrinellus
ENSRNOG00000007838Ddx479385.211ENSAOCG00000015213ddx478984.988Amphiprion_ocellaris
ENSRNOG00000007838Ddx479384.941ENSAPEG00000014476ddx479187.023Amphiprion_percula
ENSRNOG00000007838Ddx479484.615ENSATEG00000010277ddx479382.998Anabas_testudineus
ENSRNOG00000007838Ddx479389.930ENSAPLG00000015324DDX479589.569Anas_platyrhynchos
ENSRNOG00000007838Ddx479788.914ENSACAG00000010648DDX479988.914Anolis_carolinensis
ENSRNOG00000007838Ddx478197.019ENSANAG00000025235DDX4710097.019Aotus_nancymaae
ENSRNOG00000007838Ddx479880.717ENSAMXG00000010727ddx479380.717Astyanax_mexicanus
ENSRNOG00000007838Ddx4710096.499ENSBTAG00000019608DDX4710096.499Bos_taurus
ENSRNOG00000007838Ddx479165.789WBGene00012059T26G10.19362.500Caenorhabditis_elegans
ENSRNOG00000007838Ddx4710096.264ENSCJAG00000021633DDX4710096.264Callithrix_jacchus
ENSRNOG00000007838Ddx4710096.491ENSCAFG00000013224DDX479596.491Canis_familiaris
ENSRNOG00000007838Ddx4710096.491ENSCAFG00020006612DDX4710096.491Canis_lupus_dingo
ENSRNOG00000007838Ddx479996.053ENSCHIG00000026011DDX479996.053Capra_hircus
ENSRNOG00000007838Ddx4710095.824ENSTSYG00000002978DDX4710095.824Carlito_syrichta
ENSRNOG00000007838Ddx475896.575ENSCAPG00000002814DDX4710096.575Cavia_aperea
ENSRNOG00000007838Ddx4710096.711ENSCPOG00000035172DDX4710096.711Cavia_porcellus
ENSRNOG00000007838Ddx4710096.703ENSCCAG00000025717DDX4710096.703Cebus_capucinus
ENSRNOG00000007838Ddx4710096.484ENSCATG00000014281-10096.484Cercocebus_atys
ENSRNOG00000007838Ddx476286.429ENSCATG00000038188-9993.200Cercocebus_atys
ENSRNOG00000007838Ddx4710096.703ENSCLAG00000015856DDX4710096.703Chinchilla_lanigera
ENSRNOG00000007838Ddx4710096.484ENSCSAG00000008569DDX4710096.484Chlorocebus_sabaeus
ENSRNOG00000007838Ddx4710062.418ENSCHOG00000010943DDX4710062.418Choloepus_hoffmanni
ENSRNOG00000007838Ddx4710089.670ENSCPBG00000020967-9989.670Chrysemys_picta_bellii
ENSRNOG00000007838Ddx478972.973ENSCING00000002081-9172.973Ciona_intestinalis
ENSRNOG00000007838Ddx479570.766ENSCSAVG00000011566-9670.766Ciona_savignyi
ENSRNOG00000007838Ddx4710096.703ENSCANG00000040222DDX4710096.703Colobus_angolensis_palliatus
ENSRNOG00000007838Ddx4710097.802ENSCGRG00001014927Ddx4710097.802Cricetulus_griseus_chok1gshd
ENSRNOG00000007838Ddx4710097.802ENSCGRG00000010351Ddx4710097.802Cricetulus_griseus_crigri
ENSRNOG00000007838Ddx478985.679ENSCSEG00000007687ddx479285.679Cynoglossus_semilaevis
ENSRNOG00000007838Ddx4710090.372ENSDNOG00000040799DDX4710090.372Dasypus_novemcinctus
ENSRNOG00000007838Ddx479473.536FBgn0032919CG92538771.783Drosophila_melanogaster
ENSRNOG00000007838Ddx477597.674ENSETEG00000011487DDX478397.674Echinops_telfairi
ENSRNOG00000007838Ddx4710096.703ENSEASG00005014653DDX4710096.703Equus_asinus_asinus
ENSRNOG00000007838Ddx4710096.923ENSECAG00000023622DDX4710096.923Equus_caballus
ENSRNOG00000007838Ddx478497.826ENSEEUG00000008639DDX478497.826Erinaceus_europaeus
ENSRNOG00000007838Ddx479681.591ENSELUG00000009495ddx478281.448Esox_lucius
ENSRNOG00000007838Ddx4710096.044ENSFCAG00000013990DDX4710096.044Felis_catus
ENSRNOG00000007838Ddx479292.124ENSFALG00000011391DDX479987.905Ficedula_albicollis
ENSRNOG00000007838Ddx476571.429ENSFDAG00000004127-7370.714Fukomys_damarensis
ENSRNOG00000007838Ddx4710094.505ENSFDAG00000014635-10094.505Fukomys_damarensis
ENSRNOG00000007838Ddx479583.524ENSFHEG00000011435ddx479482.522Fundulus_heteroclitus
ENSRNOG00000007838Ddx478484.334ENSGMOG00000010290ddx4710084.334Gadus_morhua
ENSRNOG00000007838Ddx479291.607ENSGALG00000011794DDX479988.210Gallus_gallus
ENSRNOG00000007838Ddx479583.641ENSGAFG00000017403ddx479482.628Gambusia_affinis
ENSRNOG00000007838Ddx479981.278ENSGACG00000007092ddx479782.103Gasterosteus_aculeatus
ENSRNOG00000007838Ddx4710088.132ENSGAGG00000023801DDX479088.132Gopherus_agassizii
ENSRNOG00000007838Ddx4710096.264ENSGGOG00000005882DDX4710096.264Gorilla_gorilla
ENSRNOG00000007838Ddx479285.167ENSHBUG00000022213ddx479084.491Haplochromis_burtoni
ENSRNOG00000007838Ddx4710095.385ENSHGLG00000007623DDX4710095.385Heterocephalus_glaber_female
ENSRNOG00000007838Ddx4710095.385ENSHGLG00100009764DDX4710095.385Heterocephalus_glaber_male
ENSRNOG00000007838Ddx479385.647ENSHCOG00000005496ddx479084.598Hippocampus_comes
ENSRNOG00000007838Ddx479682.579ENSIPUG00000023788ddx479482.579Ictalurus_punctatus
ENSRNOG00000007838Ddx479498.592ENSSTOG00000027266DDX479798.592Ictidomys_tridecemlineatus
ENSRNOG00000007838Ddx4710095.604ENSJJAG00000000118Ddx4710095.604Jaculus_jaculus
ENSRNOG00000007838Ddx479384.323ENSKMAG00000013071ddx479180.973Kryptolebias_marmoratus
ENSRNOG00000007838Ddx479682.151ENSLBEG00000028348ddx479580.303Labrus_bergylta
ENSRNOG00000007838Ddx479487.850ENSLACG00000013814DDX479984.735Latimeria_chalumnae
ENSRNOG00000007838Ddx4710096.264ENSLAFG00000015474DDX4710096.264Loxodonta_africana
ENSRNOG00000007838Ddx4710096.484ENSMFAG00000042577DDX4710096.484Macaca_fascicularis
ENSRNOG00000007838Ddx4710096.484ENSMMUG00000017993DDX4710096.484Macaca_mulatta
ENSRNOG00000007838Ddx4710085.275ENSMNEG00000044164DDX4710085.275Macaca_nemestrina
ENSRNOG00000007838Ddx4710096.484ENSMLEG00000040358-10096.484Mandrillus_leucophaeus
ENSRNOG00000007838Ddx476287.857ENSMLEG00000037204-9487.857Mandrillus_leucophaeus
ENSRNOG00000007838Ddx479782.045ENSMAMG00000008915ddx479580.568Mastacembelus_armatus
ENSRNOG00000007838Ddx478647.000ENSMZEG00005022989-8947.000Maylandia_zebra
ENSRNOG00000007838Ddx479272.275ENSMZEG00005004902DDX478972.222Maylandia_zebra
ENSRNOG00000007838Ddx479091.727ENSMGAG00000011857DDX479891.294Meleagris_gallopavo
ENSRNOG00000007838Ddx4710098.242ENSMAUG00000012214Ddx4710098.242Mesocricetus_auratus
ENSRNOG00000007838Ddx478496.805ENSMICG00000010086DDX4710097.735Microcebus_murinus
ENSRNOG00000007838Ddx4710098.022ENSMOCG00000003693Ddx4710098.022Microtus_ochrogaster
ENSRNOG00000007838Ddx479381.991ENSMMOG00000008610ddx479481.379Mola_mola
ENSRNOG00000007838Ddx4710089.693ENSMODG00000018223DDX479989.693Monodelphis_domestica
ENSRNOG00000007838Ddx479583.953ENSMALG00000002420ddx479183.636Monopterus_albus
ENSRNOG00000007838Ddx4710098.681MGP_CAROLIEiJ_G0028986Ddx47100100.000Mus_caroli
ENSRNOG00000007838Ddx4710098.901ENSMUSG00000030204Ddx47100100.000Mus_musculus
ENSRNOG00000007838Ddx4710098.681MGP_PahariEiJ_G0022748Ddx47100100.000Mus_pahari
ENSRNOG00000007838Ddx479998.899MGP_SPRETEiJ_G0030034Ddx47100100.000Mus_spretus
ENSRNOG00000007838Ddx4710095.824ENSMPUG00000011726DDX4710095.824Mustela_putorius_furo
ENSRNOG00000007838Ddx4710095.604ENSMLUG00000003163DDX4710095.604Myotis_lucifugus
ENSRNOG00000007838Ddx4710098.022ENSNGAG00000020166Ddx4710098.022Nannospalax_galili
ENSRNOG00000007838Ddx479284.928ENSNBRG00000001394ddx479283.753Neolamprologus_brichardi
ENSRNOG00000007838Ddx4710096.264ENSNLEG00000003605DDX4710096.264Nomascus_leucogenys
ENSRNOG00000007838Ddx478782.741ENSMEUG00000005930DDX479982.741Notamacropus_eugenii
ENSRNOG00000007838Ddx477997.667ENSOPRG00000014446DDX477997.667Ochotona_princeps
ENSRNOG00000007838Ddx4710096.095ENSODEG00000012890DDX4710096.095Octodon_degus
ENSRNOG00000007838Ddx479583.641ENSONIG00000008325ddx479683.641Oreochromis_niloticus
ENSRNOG00000007838Ddx475890.335ENSOANG00000003026-9490.335Ornithorhynchus_anatinus
ENSRNOG00000007838Ddx4710096.044ENSOCUG00000014390DDX4710096.044Oryctolagus_cuniculus
ENSRNOG00000007838Ddx479385.412ENSORLG00000015021ddx478885.315Oryzias_latipes
ENSRNOG00000007838Ddx479285.885ENSORLG00020005546ddx478987.532Oryzias_latipes_hni
ENSRNOG00000007838Ddx479285.646ENSORLG00015017712ddx478885.315Oryzias_latipes_hsok
ENSRNOG00000007838Ddx479682.609ENSOMEG00000008065ddx479182.313Oryzias_melastigma
ENSRNOG00000007838Ddx4710092.747ENSOGAG00000003748DDX4710092.747Otolemur_garnettii
ENSRNOG00000007838Ddx479996.053ENSOARG00000020845DDX479796.053Ovis_aries
ENSRNOG00000007838Ddx4710096.264ENSPPAG00000039793DDX4710096.264Pan_paniscus
ENSRNOG00000007838Ddx4710096.484ENSPPRG00000017561DDX4710096.484Panthera_pardus
ENSRNOG00000007838Ddx4710096.484ENSPTIG00000019604DDX4710096.484Panthera_tigris_altaica
ENSRNOG00000007838Ddx4710096.044ENSPTRG00000033743DDX4710096.044Pan_troglodytes
ENSRNOG00000007838Ddx4710096.044ENSPANG00000016430DDX4710096.044Papio_anubis
ENSRNOG00000007838Ddx479680.493ENSPKIG00000006718ddx479282.033Paramormyrops_kingsleyae
ENSRNOG00000007838Ddx479889.532ENSPSIG00000006056DDX479889.532Pelodiscus_sinensis
ENSRNOG00000007838Ddx479384.834ENSPMGG00000009920ddx479680.610Periophthalmus_magnuspinnatus
ENSRNOG00000007838Ddx4710098.022ENSPEMG00000009746Ddx4710098.022Peromyscus_maniculatus_bairdii
ENSRNOG00000007838Ddx479386.493ENSPMAG00000000186-10086.493Petromyzon_marinus
ENSRNOG00000007838Ddx479990.549ENSPCIG00000029927DDX479990.549Phascolarctos_cinereus
ENSRNOG00000007838Ddx479484.813ENSPFOG00000003330ddx478983.747Poecilia_formosa
ENSRNOG00000007838Ddx478879.699ENSPLAG00000014318ddx478579.699Poecilia_latipinna
ENSRNOG00000007838Ddx479584.101ENSPMEG00000018616ddx479083.073Poecilia_mexicana
ENSRNOG00000007838Ddx479583.716ENSPREG00000015560ddx479480.931Poecilia_reticulata
ENSRNOG00000007838Ddx4710096.264ENSPPYG00000004309DDX4710096.264Pongo_abelii
ENSRNOG00000007838Ddx476297.315ENSPCAG00000013197-7197.315Procavia_capensis
ENSRNOG00000007838Ddx4710097.143ENSPCOG00000028218DDX4710097.143Propithecus_coquereli
ENSRNOG00000007838Ddx479993.612ENSPVAG00000002640DDX479993.612Pteropus_vampyrus
ENSRNOG00000007838Ddx479285.167ENSPNYG00000020669ddx479580.610Pundamilia_nyererei
ENSRNOG00000007838Ddx479481.860ENSPNAG00000011435ddx479480.909Pygocentrus_nattereri
ENSRNOG00000007838Ddx4710096.484ENSRBIG00000026934DDX4710096.484Rhinopithecus_bieti
ENSRNOG00000007838Ddx4710096.484ENSRROG00000025014DDX4710096.484Rhinopithecus_roxellana
ENSRNOG00000007838Ddx478955.637YHR065C-8155.637Saccharomyces_cerevisiae
ENSRNOG00000007838Ddx4710096.264ENSSBOG00000035866DDX4710096.264Saimiri_boliviensis_boliviensis
ENSRNOG00000007838Ddx4710089.912ENSSHAG00000010825DDX478889.912Sarcophilus_harrisii
ENSRNOG00000007838Ddx479285.851ENSSFOG00015013392ddx479384.598Scleropages_formosus
ENSRNOG00000007838Ddx479384.198ENSSMAG00000004179ddx478883.871Scophthalmus_maximus
ENSRNOG00000007838Ddx479185.060ENSSDUG00000018110ddx479077.399Seriola_dumerili
ENSRNOG00000007838Ddx479583.256ENSSLDG00000018142ddx478982.955Seriola_lalandi_dorsalis
ENSRNOG00000007838Ddx476695.318ENSSARG00000007535DDX4710095.318Sorex_araneus
ENSRNOG00000007838Ddx479490.210ENSSPUG00000004958DDX479490.210Sphenodon_punctatus
ENSRNOG00000007838Ddx479385.176ENSSPAG00000016431ddx478982.955Stegastes_partitus
ENSRNOG00000007838Ddx4710097.363ENSSSCG00000033149DDX479698.592Sus_scrofa
ENSRNOG00000007838Ddx479789.367ENSTGUG00000009385DDX4710089.207Taeniopygia_guttata
ENSRNOG00000007838Ddx479881.960ENSTRUG00000021826ddx479681.858Takifugu_rubripes
ENSRNOG00000007838Ddx4710085.275ENSTBEG00000013697DDX4710085.275Tupaia_belangeri
ENSRNOG00000007838Ddx479995.595ENSTTRG00000015036DDX479995.595Tursiops_truncatus
ENSRNOG00000007838Ddx4710096.703ENSUAMG00000016382DDX479996.703Ursus_americanus
ENSRNOG00000007838Ddx4710096.484ENSUMAG00000002358DDX4710096.484Ursus_maritimus
ENSRNOG00000007838Ddx4759100.000ENSVPAG00000004648-59100.000Vicugna_pacos
ENSRNOG00000007838Ddx477775.214ENSVPAG00000012483-10075.214Vicugna_pacos
ENSRNOG00000007838Ddx4710096.491ENSVVUG00000004697DDX479596.491Vulpes_vulpes
ENSRNOG00000007838Ddx479987.417ENSXETG00000022984ddx479987.417Xenopus_tropicalis
ENSRNOG00000007838Ddx479783.636ENSXCOG00000015880ddx479682.637Xiphophorus_couchianus
ENSRNOG00000007838Ddx479783.409ENSXMAG00000008268ddx478582.418Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003676nucleic acid binding-IEAFunction
GO:0004386helicase activity-IEAFunction
GO:0005524ATP binding-IEAFunction
GO:0005730nucleolus-IEAComponent
GO:0005730nucleolus-ISOComponent
GO:0006364rRNA processing-IEAProcess
GO:0006364rRNA processing-ISOProcess
GO:0008380RNA splicing-IEAProcess
GO:0008380RNA splicing-ISOProcess
GO:0008625extrinsic apoptotic signaling pathway via death domain receptors-IEAProcess
GO:0008625extrinsic apoptotic signaling pathway via death domain receptors-ISOProcess

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