EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000007853 (Gene tree)
Gene ID: 500964
Gene Symbol: Prdm10
Alias: LOC500964|RGD1560384
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 73467 bases
Position: chr8:32452885-32526351
Accession: 1560384
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000010423	zf-C2H2	PF00096.26	3.3e-33	1	5
ENSRNOP00000010423	zf-C2H2	PF00096.26	3.3e-33	2	5
ENSRNOP00000010423	zf-C2H2	PF00096.26	3.3e-33	3	5
ENSRNOP00000010423	zf-C2H2	PF00096.26	3.3e-33	4	5
ENSRNOP00000010423	zf-C2H2	PF00096.26	3.3e-33	5	5
ENSRNOP00000010423	zf-met	PF12874.7	5.9e-06	1	2
ENSRNOP00000010423	zf-met	PF12874.7	5.9e-06	2	2
ENSRNOP00000010423	zf-C2H2_jaz	PF12171.8	5.7e-17	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000010423	-	6710	XM_008766069	ENSRNOP00000010423	1146 (aa)	XP_017451481	D3ZQ79

Gene Model

Click here to download ENSRNOG00000007853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000007853's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000007853	Prdm10	100	92.919	ENSG00000170325	PRDM10	99	94.792	Homo_sapiens
ENSRNOG00000007853	Prdm10	100	88.555	ENSAMEG00000002425	PRDM10	100	88.555	Ailuropoda_melanoleuca
ENSRNOG00000007853	Prdm10	100	84.224	ENSAPLG00000004858	PRDM10	100	84.224	Anas_platyrhynchos
ENSRNOG00000007853	Prdm10	100	84.757	ENSANAG00000022064	PRDM10	100	78.208	Aotus_nancymaae
ENSRNOG00000007853	Prdm10	100	91.688	ENSBTAG00000019001	PRDM10	100	92.188	Bos_taurus
ENSRNOG00000007853	Prdm10	100	92.913	ENSCJAG00000009235	PRDM10	100	92.913	Callithrix_jacchus
ENSRNOG00000007853	Prdm10	100	92.153	ENSCAFG00000010164	PRDM10	100	92.153	Canis_familiaris
ENSRNOG00000007853	Prdm10	100	91.010	ENSCAFG00020010152	PRDM10	96	98.667	Canis_lupus_dingo
ENSRNOG00000007853	Prdm10	100	92.121	ENSCHIG00000026530	PRDM10	100	91.681	Capra_hircus
ENSRNOG00000007853	Prdm10	100	93.696	ENSTSYG00000000544	PRDM10	100	93.782	Carlito_syrichta
ENSRNOG00000007853	Prdm10	100	85.776	ENSCAPG00000017296	PRDM10	100	85.948	Cavia_aperea
ENSRNOG00000007853	Prdm10	99	77.551	ENSCPOG00000000389	PRDM10	98	86.779	Cavia_porcellus
ENSRNOG00000007853	Prdm10	100	92.826	ENSCCAG00000024567	PRDM10	100	93.086	Cebus_capucinus
ENSRNOG00000007853	Prdm10	100	93.166	ENSCATG00000040031	PRDM10	100	93.426	Cercocebus_atys
ENSRNOG00000007853	Prdm10	100	91.731	ENSCLAG00000014605	PRDM10	100	92.248	Chinchilla_lanigera
ENSRNOG00000007853	Prdm10	100	93.339	ENSCSAG00000002202	PRDM10	100	93.685	Chlorocebus_sabaeus
ENSRNOG00000007853	Prdm10	100	81.417	ENSCPBG00000026880	PRDM10	99	81.417	Chrysemys_picta_bellii
ENSRNOG00000007853	Prdm10	100	93.258	ENSCANG00000032669	PRDM10	100	93.518	Colobus_angolensis_palliatus
ENSRNOG00000007853	Prdm10	100	97.472	ENSCGRG00001021647	Prdm10	98	97.472	Cricetulus_griseus_chok1gshd
ENSRNOG00000007853	Prdm10	100	97.472	ENSCGRG00000006562	Prdm10	98	97.472	Cricetulus_griseus_crigri
ENSRNOG00000007853	Prdm10	82	92.211	ENSDNOG00000001366	PRDM10	95	92.211	Dasypus_novemcinctus
ENSRNOG00000007853	Prdm10	100	94.420	ENSDORG00000014292	Prdm10	100	94.333	Dipodomys_ordii
ENSRNOG00000007853	Prdm10	100	92.208	ENSEASG00005022914	PRDM10	100	92.727	Equus_asinus_asinus
ENSRNOG00000007853	Prdm10	100	92.121	ENSECAG00000011499	PRDM10	100	92.641	Equus_caballus
ENSRNOG00000007853	Prdm10	98	92.145	ENSFCAG00000004111	PRDM10	96	92.145	Felis_catus
ENSRNOG00000007853	Prdm10	100	81.135	ENSFALG00000004873	PRDM10	100	81.135	Ficedula_albicollis
ENSRNOG00000007853	Prdm10	100	92.078	ENSFDAG00000017311	PRDM10	100	91.908	Fukomys_damarensis
ENSRNOG00000007853	Prdm10	100	81.583	ENSGALG00000033660	PRDM10	99	84.574	Gallus_gallus
ENSRNOG00000007853	Prdm10	98	60.833	ENSGACG00000012293	prdm10	100	59.083	Gasterosteus_aculeatus
ENSRNOG00000007853	Prdm10	100	82.833	ENSGAGG00000012523	PRDM10	99	82.833	Gopherus_agassizii
ENSRNOG00000007853	Prdm10	100	94.087	ENSGGOG00000015359	PRDM10	100	94.005	Gorilla_gorilla
ENSRNOG00000007853	Prdm10	100	91.952	ENSHGLG00000001106	PRDM10	100	92.209	Heterocephalus_glaber_female
ENSRNOG00000007853	Prdm10	100	92.281	ENSHGLG00100002350	PRDM10	100	92.367	Heterocephalus_glaber_male
ENSRNOG00000007853	Prdm10	100	94.036	ENSSTOG00000002015	PRDM10	100	94.296	Ictidomys_tridecemlineatus
ENSRNOG00000007853	Prdm10	82	93.453	ENSJJAG00000021493	Prdm10	90	92.857	Jaculus_jaculus
ENSRNOG00000007853	Prdm10	100	88.670	ENSLAFG00000031867	PRDM10	100	88.498	Loxodonta_africana
ENSRNOG00000007853	Prdm10	100	93.253	ENSMFAG00000031008	PRDM10	100	93.512	Macaca_fascicularis
ENSRNOG00000007853	Prdm10	100	93.253	ENSMMUG00000017555	PRDM10	100	93.512	Macaca_mulatta
ENSRNOG00000007853	Prdm10	100	93.166	ENSMNEG00000036493	PRDM10	100	93.426	Macaca_nemestrina
ENSRNOG00000007853	Prdm10	94	86.381	ENSMLEG00000042028	PRDM10	100	87.050	Mandrillus_leucophaeus
ENSRNOG00000007853	Prdm10	100	81.287	ENSMGAG00000001112	PRDM10	100	81.287	Meleagris_gallopavo
ENSRNOG00000007853	Prdm10	100	93.080	ENSMICG00000013888	PRDM10	100	93.339	Microcebus_murinus
ENSRNOG00000007853	Prdm10	100	95.137	ENSMOCG00000021853	Prdm10	99	97.403	Microtus_ochrogaster
ENSRNOG00000007853	Prdm10	76	86.312	ENSMODG00000004979	PRDM10	99	86.735	Monodelphis_domestica
ENSRNOG00000007853	Prdm10	100	96.672	ENSMUSG00000042496	Prdm10	100	96.672	Mus_musculus
ENSRNOG00000007853	Prdm10	100	98.522	MGP_SPRETEiJ_G0033061	-	100	98.522	Mus_spretus
ENSRNOG00000007853	Prdm10	100	92.208	ENSMPUG00000008711	PRDM10	99	92.208	Mustela_putorius_furo
ENSRNOG00000007853	Prdm10	100	91.710	ENSMLUG00000013051	PRDM10	100	91.451	Myotis_lucifugus
ENSRNOG00000007853	Prdm10	100	96.161	ENSNGAG00000000580	Prdm10	100	96.161	Nannospalax_galili
ENSRNOG00000007853	Prdm10	100	93.512	ENSNLEG00000007488	PRDM10	100	93.772	Nomascus_leucogenys
ENSRNOG00000007853	Prdm10	100	91.197	ENSODEG00000005309	PRDM10	100	91.197	Octodon_degus
ENSRNOG00000007853	Prdm10	100	78.279	ENSOANG00000000577	-	100	77.598	Ornithorhynchus_anatinus
ENSRNOG00000007853	Prdm10	100	92.461	ENSOCUG00000003736	PRDM10	100	92.461	Oryctolagus_cuniculus
ENSRNOG00000007853	Prdm10	100	92.328	ENSOGAG00000010723	PRDM10	100	92.328	Otolemur_garnettii
ENSRNOG00000007853	Prdm10	100	92.035	ENSOARG00000014507	PRDM10	100	91.594	Ovis_aries
ENSRNOG00000007853	Prdm10	100	94.000	ENSPPAG00000042881	PRDM10	100	93.918	Pan_paniscus
ENSRNOG00000007853	Prdm10	100	91.775	ENSPPRG00000007002	PRDM10	100	91.775	Panthera_pardus
ENSRNOG00000007853	Prdm10	100	91.688	ENSPTIG00000013331	PRDM10	100	91.688	Panthera_tigris_altaica
ENSRNOG00000007853	Prdm10	100	94.174	ENSPTRG00000004477	PRDM10	100	94.092	Pan_troglodytes
ENSRNOG00000007853	Prdm10	100	93.253	ENSPANG00000017470	PRDM10	100	93.512	Papio_anubis
ENSRNOG00000007853	Prdm10	100	96.144	ENSPEMG00000014985	Prdm10	100	96.144	Peromyscus_maniculatus_bairdii
ENSRNOG00000007853	Prdm10	100	93.264	ENSPPYG00000004061	PRDM10	100	93.351	Pongo_abelii
ENSRNOG00000007853	Prdm10	92	82.369	ENSPCAG00000014514	PRDM10	99	83.209	Procavia_capensis
ENSRNOG00000007853	Prdm10	100	79.088	ENSPCOG00000023406	PRDM10	100	80.155	Propithecus_coquereli
ENSRNOG00000007853	Prdm10	100	92.752	ENSPVAG00000012764	PRDM10	100	92.407	Pteropus_vampyrus
ENSRNOG00000007853	Prdm10	100	93.264	ENSRBIG00000030924	PRDM10	100	93.351	Rhinopithecus_bieti
ENSRNOG00000007853	Prdm10	100	93.264	ENSRROG00000034334	PRDM10	100	93.351	Rhinopithecus_roxellana
ENSRNOG00000007853	Prdm10	100	92.919	ENSSBOG00000008773	PRDM10	100	93.005	Saimiri_boliviensis_boliviensis
ENSRNOG00000007853	Prdm10	99	85.641	ENSSHAG00000004503	PRDM10	99	86.071	Sarcophilus_harrisii
ENSRNOG00000007853	Prdm10	68	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSRNOG00000007853	Prdm10	100	81.353	ENSSPUG00000001178	PRDM10	97	84.470	Sphenodon_punctatus
ENSRNOG00000007853	Prdm10	100	91.530	ENSSSCG00000015243	PRDM10	100	91.271	Sus_scrofa
ENSRNOG00000007853	Prdm10	100	83.663	ENSTGUG00000000530	PRDM10	100	83.663	Taeniopygia_guttata
ENSRNOG00000007853	Prdm10	95	90.088	ENSTBEG00000007221	PRDM10	94	90.088	Tupaia_belangeri
ENSRNOG00000007853	Prdm10	100	90.155	ENSTTRG00000009189	PRDM10	100	89.378	Tursiops_truncatus
ENSRNOG00000007853	Prdm10	91	91.981	ENSUAMG00000018832	PRDM10	92	96.104	Ursus_americanus
ENSRNOG00000007853	Prdm10	100	90.136	ENSUMAG00000003167	PRDM10	97	94.805	Ursus_maritimus
ENSRNOG00000007853	Prdm10	100	91.948	ENSVVUG00000019878	PRDM10	100	91.948	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000979	RNA polymerase II core promoter sequence-specific DNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0010468	regulation of gene expression	21873635.	IBA	Process
GO:0035097	histone methyltransferase complex	21873635.	IBA	Component
GO:0046872	metal ion binding	-	IEA	Function