EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000008059 (Gene tree)
Gene ID: 305908
Gene Symbol: Rnf17
Alias: LOC305908
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 135467 bases
Position: chr15:36609296-36744762
Accession: 1310486
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000010795	TUDOR	PF00567.24	7.7e-83	1	5
ENSRNOP00000010795	TUDOR	PF00567.24	7.7e-83	2	5
ENSRNOP00000010795	TUDOR	PF00567.24	7.7e-83	3	5
ENSRNOP00000010795	TUDOR	PF00567.24	7.7e-83	4	5
ENSRNOP00000010795	TUDOR	PF00567.24	7.7e-83	5	5

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000010795	-	5211	-	ENSRNOP00000010795	1640 (aa)	-	D3ZLP2

Gene Model

Click here to download ENSRNOG00000008059's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000008059's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000008059	Rnf17	73	33.333	ENSRNOG00000017064	Tdrd1	70	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000008059	Rnf17	100	73.761	ENSG00000132972	RNF17	99	80.211	Homo_sapiens
ENSRNOG00000008059	Rnf17	81	32.824	ENSAPOG00000017034	rnf17	75	35.216	Acanthochromis_polyacanthus
ENSRNOG00000008059	Rnf17	100	76.090	ENSAMEG00000017340	RNF17	100	76.090	Ailuropoda_melanoleuca
ENSRNOG00000008059	Rnf17	76	35.669	ENSAOCG00000018283	rnf17	98	32.333	Amphiprion_ocellaris
ENSRNOG00000008059	Rnf17	73	35.173	ENSAPEG00000022338	rnf17	83	34.679	Amphiprion_percula
ENSRNOG00000008059	Rnf17	87	32.036	ENSATEG00000002067	rnf17	99	32.309	Anabas_testudineus
ENSRNOG00000008059	Rnf17	88	48.807	ENSAPLG00000003969	RNF17	100	49.048	Anas_platyrhynchos
ENSRNOG00000008059	Rnf17	91	46.058	ENSACAG00000001418	RNF17	92	45.957	Anolis_carolinensis
ENSRNOG00000008059	Rnf17	98	62.116	ENSANAG00000029969	RNF17	96	65.367	Aotus_nancymaae
ENSRNOG00000008059	Rnf17	97	30.896	ENSACLG00000018279	rnf17	98	30.988	Astatotilapia_calliptera
ENSRNOG00000008059	Rnf17	87	34.679	ENSAMXG00000011002	rnf17	96	34.679	Astyanax_mexicanus
ENSRNOG00000008059	Rnf17	55	78.338	ENSBTAG00000000278	RNF17	100	78.338	Bos_taurus
ENSRNOG00000008059	Rnf17	100	72.310	ENSCJAG00000018937	RNF17	100	73.778	Callithrix_jacchus
ENSRNOG00000008059	Rnf17	98	76.020	ENSCAFG00000007418	RNF17	100	79.170	Canis_familiaris
ENSRNOG00000008059	Rnf17	97	78.158	ENSCHIG00000026716	RNF17	100	78.009	Capra_hircus
ENSRNOG00000008059	Rnf17	97	72.688	ENSTSYG00000000365	RNF17	99	72.688	Carlito_syrichta
ENSRNOG00000008059	Rnf17	82	65.840	ENSCAPG00000012908	RNF17	99	65.840	Cavia_aperea
ENSRNOG00000008059	Rnf17	100	72.716	ENSCCAG00000026725	RNF17	99	74.519	Cebus_capucinus
ENSRNOG00000008059	Rnf17	100	73.277	ENSCATG00000040352	RNF17	100	75.556	Cercocebus_atys
ENSRNOG00000008059	Rnf17	100	75.852	ENSCLAG00000004127	RNF17	100	75.852	Chinchilla_lanigera
ENSRNOG00000008059	Rnf17	100	73.458	ENSCSAG00000018019	RNF17	100	73.458	Chlorocebus_sabaeus
ENSRNOG00000008059	Rnf17	90	81.780	ENSCHOG00000013310	RNF17	91	81.780	Choloepus_hoffmanni
ENSRNOG00000008059	Rnf17	92	57.039	ENSCPBG00000020920	RNF17	97	57.087	Chrysemys_picta_bellii
ENSRNOG00000008059	Rnf17	99	72.474	ENSCANG00000032927	RNF17	99	75.074	Colobus_angolensis_palliatus
ENSRNOG00000008059	Rnf17	100	90.012	ENSCGRG00001022658	Rnf17	100	90.012	Cricetulus_griseus_chok1gshd
ENSRNOG00000008059	Rnf17	100	90.012	ENSCGRG00000009924	Rnf17	100	90.012	Cricetulus_griseus_crigri
ENSRNOG00000008059	Rnf17	79	34.023	ENSCSEG00000008626	rnf17	84	34.023	Cynoglossus_semilaevis
ENSRNOG00000008059	Rnf17	67	32.822	ENSCVAG00000017008	rnf17	83	32.822	Cyprinodon_variegatus
ENSRNOG00000008059	Rnf17	97	31.686	ENSDARG00000056387	rnf17	98	31.734	Danio_rerio
ENSRNOG00000008059	Rnf17	99	75.425	ENSDNOG00000006115	RNF17	99	75.425	Dasypus_novemcinctus
ENSRNOG00000008059	Rnf17	73	87.500	ENSETEG00000017874	-	73	87.500	Echinops_telfairi
ENSRNOG00000008059	Rnf17	50	86.842	ENSEASG00005001421	-	99	86.842	Equus_asinus_asinus
ENSRNOG00000008059	Rnf17	100	77.865	ENSECAG00000017152	RNF17	99	77.865	Equus_caballus
ENSRNOG00000008059	Rnf17	83	64.481	ENSEEUG00000000332	RNF17	90	64.481	Erinaceus_europaeus
ENSRNOG00000008059	Rnf17	87	36.105	ENSELUG00000005626	rnf17	87	36.105	Esox_lucius
ENSRNOG00000008059	Rnf17	100	76.649	ENSFCAG00000004914	RNF17	100	79.346	Felis_catus
ENSRNOG00000008059	Rnf17	86	50.751	ENSFALG00000008766	RNF17	90	51.721	Ficedula_albicollis
ENSRNOG00000008059	Rnf17	100	74.471	ENSFDAG00000017857	RNF17	100	74.471	Fukomys_damarensis
ENSRNOG00000008059	Rnf17	97	31.016	ENSFHEG00000014822	rnf17	98	30.895	Fundulus_heteroclitus
ENSRNOG00000008059	Rnf17	52	37.681	ENSGMOG00000015560	-	97	37.681	Gadus_morhua
ENSRNOG00000008059	Rnf17	73	33.223	ENSGAFG00000004463	rnf17	89	33.361	Gambusia_affinis
ENSRNOG00000008059	Rnf17	92	55.040	ENSGAGG00000016999	RNF17	91	55.402	Gopherus_agassizii
ENSRNOG00000008059	Rnf17	100	73.821	ENSGGOG00000014491	RNF17	100	78.238	Gorilla_gorilla
ENSRNOG00000008059	Rnf17	97	31.013	ENSHBUG00000003554	rnf17	98	31.106	Haplochromis_burtoni
ENSRNOG00000008059	Rnf17	100	75.682	ENSHGLG00000007270	RNF17	100	75.682	Heterocephalus_glaber_female
ENSRNOG00000008059	Rnf17	100	75.561	ENSHGLG00100017393	RNF17	100	75.561	Heterocephalus_glaber_male
ENSRNOG00000008059	Rnf17	62	41.304	ENSHCOG00000017676	rnf17	78	41.304	Hippocampus_comes
ENSRNOG00000008059	Rnf17	73	35.832	ENSIPUG00000001087	rnf17	80	35.832	Ictalurus_punctatus
ENSRNOG00000008059	Rnf17	100	79.648	ENSJJAG00000016584	Rnf17	100	79.648	Jaculus_jaculus
ENSRNOG00000008059	Rnf17	89	34.038	ENSKMAG00000013403	rnf17	87	34.221	Kryptolebias_marmoratus
ENSRNOG00000008059	Rnf17	86	30.193	ENSLBEG00000014910	rnf17	93	30.381	Labrus_bergylta
ENSRNOG00000008059	Rnf17	88	46.627	ENSLACG00000000323	RNF17	99	46.543	Latimeria_chalumnae
ENSRNOG00000008059	Rnf17	100	73.398	ENSMFAG00000032388	RNF17	100	75.407	Macaca_fascicularis
ENSRNOG00000008059	Rnf17	100	74.607	ENSMMUG00000014610	RNF17	100	78.095	Macaca_mulatta
ENSRNOG00000008059	Rnf17	100	73.337	ENSMNEG00000011234	RNF17	100	77.944	Macaca_nemestrina
ENSRNOG00000008059	Rnf17	100	73.096	ENSMLEG00000030227	RNF17	100	74.550	Mandrillus_leucophaeus
ENSRNOG00000008059	Rnf17	73	33.527	ENSMAMG00000020403	rnf17	86	33.527	Mastacembelus_armatus
ENSRNOG00000008059	Rnf17	97	30.957	ENSMZEG00005019166	rnf17	98	31.049	Maylandia_zebra
ENSRNOG00000008059	Rnf17	76	49.605	ENSMGAG00000015138	RNF17	100	49.605	Meleagris_gallopavo
ENSRNOG00000008059	Rnf17	99	85.958	ENSMAUG00000004788	Rnf17	99	85.854	Mesocricetus_auratus
ENSRNOG00000008059	Rnf17	100	76.528	ENSMICG00000010364	RNF17	100	77.893	Microcebus_murinus
ENSRNOG00000008059	Rnf17	58	89.376	ENSMOCG00000011818	-	100	89.376	Microtus_ochrogaster
ENSRNOG00000008059	Rnf17	73	40.288	ENSMMOG00000019514	rnf17	83	40.288	Mola_mola
ENSRNOG00000008059	Rnf17	99	66.239	ENSMODG00000007827	RNF17	98	66.018	Monodelphis_domestica
ENSRNOG00000008059	Rnf17	66	36.193	ENSMALG00000016943	rnf17	74	39.706	Monopterus_albus
ENSRNOG00000008059	Rnf17	100	92.866	MGP_CAROLIEiJ_G0019337	Rnf17	100	92.866	Mus_caroli
ENSRNOG00000008059	Rnf17	100	92.317	ENSMUSG00000000365	Rnf17	100	92.317	Mus_musculus
ENSRNOG00000008059	Rnf17	100	91.890	MGP_PahariEiJ_G0030355	Rnf17	100	91.890	Mus_pahari
ENSRNOG00000008059	Rnf17	100	92.256	MGP_SPRETEiJ_G0020228	Rnf17	100	92.256	Mus_spretus
ENSRNOG00000008059	Rnf17	100	76.471	ENSMPUG00000013305	RNF17	100	76.471	Mustela_putorius_furo
ENSRNOG00000008059	Rnf17	100	74.985	ENSMLUG00000003903	RNF17	100	74.985	Myotis_lucifugus
ENSRNOG00000008059	Rnf17	100	81.901	ENSNGAG00000013553	Rnf17	100	81.901	Nannospalax_galili
ENSRNOG00000008059	Rnf17	73	35.977	ENSNBRG00000012006	rnf17	82	35.938	Neolamprologus_brichardi
ENSRNOG00000008059	Rnf17	100	73.156	ENSNLEG00000013780	RNF17	100	77.944	Nomascus_leucogenys
ENSRNOG00000008059	Rnf17	67	66.301	ENSMEUG00000003276	-	61	66.301	Notamacropus_eugenii
ENSRNOG00000008059	Rnf17	92	68.644	ENSOPRG00000016743	-	90	68.644	Ochotona_princeps
ENSRNOG00000008059	Rnf17	53	71.300	ENSODEG00000005443	-	100	71.300	Octodon_degus
ENSRNOG00000008059	Rnf17	97	31.174	ENSONIG00000015746	rnf17	99	34.587	Oreochromis_niloticus
ENSRNOG00000008059	Rnf17	100	76.349	ENSOCUG00000007384	RNF17	100	76.289	Oryctolagus_cuniculus
ENSRNOG00000008059	Rnf17	88	33.741	ENSORLG00000012818	rnf17	99	33.763	Oryzias_latipes
ENSRNOG00000008059	Rnf17	87	36.049	ENSORLG00020009879	-	89	36.289	Oryzias_latipes_hni
ENSRNOG00000008059	Rnf17	87	35.878	ENSORLG00015013027	-	89	36.118	Oryzias_latipes_hsok
ENSRNOG00000008059	Rnf17	66	33.273	ENSOMEG00000009891	rnf17	85	33.273	Oryzias_melastigma
ENSRNOG00000008059	Rnf17	100	74.260	ENSOGAG00000014803	RNF17	100	74.260	Otolemur_garnettii
ENSRNOG00000008059	Rnf17	98	76.343	ENSOARG00000014641	RNF17	99	76.220	Ovis_aries
ENSRNOG00000008059	Rnf17	93	78.012	ENSPPAG00000028779	RNF17	100	78.012	Pan_paniscus
ENSRNOG00000008059	Rnf17	100	76.346	ENSPPRG00000009230	RNF17	100	79.049	Panthera_pardus
ENSRNOG00000008059	Rnf17	100	76.346	ENSPTIG00000001738	RNF17	100	79.198	Panthera_tigris_altaica
ENSRNOG00000008059	Rnf17	100	73.700	ENSPTRG00000005713	RNF17	100	78.012	Pan_troglodytes
ENSRNOG00000008059	Rnf17	100	73.458	ENSPANG00000007640	RNF17	100	77.869	Papio_anubis
ENSRNOG00000008059	Rnf17	76	35.849	ENSPKIG00000001648	rnf17	90	36.498	Paramormyrops_kingsleyae
ENSRNOG00000008059	Rnf17	73	61.235	ENSPSIG00000011245	RNF17	100	61.399	Pelodiscus_sinensis
ENSRNOG00000008059	Rnf17	100	89.829	ENSPEMG00000008693	Rnf17	100	89.829	Peromyscus_maniculatus_bairdii
ENSRNOG00000008059	Rnf17	67	65.546	ENSPCIG00000009190	-	95	65.546	Phascolarctos_cinereus
ENSRNOG00000008059	Rnf17	97	30.769	ENSPFOG00000007124	rnf17	74	34.058	Poecilia_formosa
ENSRNOG00000008059	Rnf17	97	31.193	ENSPLAG00000006198	rnf17	98	30.957	Poecilia_latipinna
ENSRNOG00000008059	Rnf17	97	31.466	ENSPMEG00000022432	rnf17	98	31.364	Poecilia_mexicana
ENSRNOG00000008059	Rnf17	65	42.754	ENSPREG00000001414	rnf17	78	42.754	Poecilia_reticulata
ENSRNOG00000008059	Rnf17	100	73.761	ENSPPYG00000005215	RNF17	100	73.761	Pongo_abelii
ENSRNOG00000008059	Rnf17	73	78.947	ENSPCAG00000002665	RNF17	76	78.947	Procavia_capensis
ENSRNOG00000008059	Rnf17	91	61.141	ENSPCOG00000020211	RNF17	95	61.141	Propithecus_coquereli
ENSRNOG00000008059	Rnf17	100	65.706	ENSPVAG00000013021	RNF17	100	65.706	Pteropus_vampyrus
ENSRNOG00000008059	Rnf17	75	34.723	ENSPNAG00000027505	rnf17	87	34.804	Pygocentrus_nattereri
ENSRNOG00000008059	Rnf17	100	71.584	ENSRBIG00000027010	RNF17	100	74.005	Rhinopithecus_bieti
ENSRNOG00000008059	Rnf17	100	72.551	ENSRROG00000022801	RNF17	100	77.177	Rhinopithecus_roxellana
ENSRNOG00000008059	Rnf17	99	72.922	ENSSBOG00000021661	RNF17	99	75.259	Saimiri_boliviensis_boliviensis
ENSRNOG00000008059	Rnf17	99	65.403	ENSSHAG00000005609	RNF17	100	65.030	Sarcophilus_harrisii
ENSRNOG00000008059	Rnf17	69	47.191	ENSSFOG00015023037	rnf17	89	47.191	Scleropages_formosus
ENSRNOG00000008059	Rnf17	67	35.018	ENSSMAG00000007429	rnf17	74	35.018	Scophthalmus_maximus
ENSRNOG00000008059	Rnf17	70	33.973	ENSSDUG00000013530	rnf17	77	34.982	Seriola_dumerili
ENSRNOG00000008059	Rnf17	86	31.241	ENSSLDG00000019577	rnf17	75	34.855	Seriola_lalandi_dorsalis
ENSRNOG00000008059	Rnf17	98	69.451	ENSSARG00000003016	RNF17	94	69.451	Sorex_araneus
ENSRNOG00000008059	Rnf17	87	51.597	ENSSPUG00000008917	RNF17	95	51.597	Sphenodon_punctatus
ENSRNOG00000008059	Rnf17	69	33.564	ENSSPAG00000001925	rnf17	76	33.880	Stegastes_partitus
ENSRNOG00000008059	Rnf17	100	71.420	ENSSSCG00000009572	RNF17	100	76.237	Sus_scrofa
ENSRNOG00000008059	Rnf17	56	53.409	ENSTGUG00000011272	-	99	53.409	Taeniopygia_guttata
ENSRNOG00000008059	Rnf17	52	53.634	ENSTGUG00000011267	-	100	53.634	Taeniopygia_guttata
ENSRNOG00000008059	Rnf17	76	33.596	ENSTRUG00000015498	rnf17	77	33.631	Takifugu_rubripes
ENSRNOG00000008059	Rnf17	73	33.830	ENSTNIG00000015681	rnf17	100	33.830	Tetraodon_nigroviridis
ENSRNOG00000008059	Rnf17	100	60.377	ENSTBEG00000000282	RNF17	100	60.377	Tupaia_belangeri
ENSRNOG00000008059	Rnf17	99	68.888	ENSTTRG00000012698	RNF17	99	68.561	Tursiops_truncatus
ENSRNOG00000008059	Rnf17	83	88.732	ENSVPAG00000011388	RNF17	85	88.732	Vicugna_pacos
ENSRNOG00000008059	Rnf17	95	82.552	ENSVVUG00000006226	RNF17	100	82.726	Vulpes_vulpes
ENSRNOG00000008059	Rnf17	70	41.076	ENSXETG00000034020	RNF17	100	44.917	Xenopus_tropicalis
ENSRNOG00000008059	Rnf17	87	30.293	ENSXCOG00000018295	rnf17	76	33.392	Xiphophorus_couchianus
ENSRNOG00000008059	Rnf17	85	31.006	ENSXMAG00000014747	rnf17	77	33.954	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005737	cytoplasm	-	IEA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0007286	spermatid development	-	IEA	Process
GO:0007286	spermatid development	-	ISO	Process
GO:0042803	protein homodimerization activity	-	IEA	Function
GO:0042803	protein homodimerization activity	-	ISO	Function