EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000008081 (Gene tree)
Gene ID: 362274
Gene Symbol: Ddx27
Alias: LOC362274
Full Name: DEAD-box helicase 27
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 19273 bases
Position: chr3:163767173-163786445
Accession: 1305634
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000010806	ResIII	PF04851.15	9.1e-07	1	1
ENSRNOP00000010806	DEAD	PF00270.29	3.9e-45	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000010806	-	2685	-	ENSRNOP00000010806	761 (aa)	-	B1H269

Gene Model

Click here to download ENSRNOG00000008081's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000008081's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000008081	Ddx27	50	32.808	ENSRNOG00000001815	Eif4a2	90	33.033
ENSRNOG00000008081	Ddx27	52	33.732	ENSRNOG00000000396	Ddx50	55	33.886
ENSRNOG00000008081	Ddx27	53	31.785	ENSRNOG00000000841	Ddx39b	86	33.807
ENSRNOG00000008081	Ddx27	67	30.275	ENSRNOG00000060154	Ddx23	62	30.275
ENSRNOG00000008081	Ddx27	50	32.115	ENSRNOG00000030628	Eif4a1	92	32.115
ENSRNOG00000008081	Ddx27	52	31.250	ENSRNOG00000004670	Ddx56	78	31.640
ENSRNOG00000008081	Ddx27	53	36.930	ENSRNOG00000025430	Ddx18	71	34.185

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000008081	Ddx27	100	92.288	ENSG00000124228	DDX27	99	92.980	Homo_sapiens
ENSRNOG00000008081	Ddx27	99	70.404	ENSAPOG00000017645	ddx27	99	70.635	Acanthochromis_polyacanthus
ENSRNOG00000008081	Ddx27	99	90.464	ENSAMEG00000013627	DDX27	97	91.391	Ailuropoda_melanoleuca
ENSRNOG00000008081	Ddx27	87	78.621	ENSACIG00000014378	ddx27	96	80.105	Amphilophus_citrinellus
ENSRNOG00000008081	Ddx27	100	69.935	ENSAOCG00000021035	ddx27	99	70.938	Amphiprion_ocellaris
ENSRNOG00000008081	Ddx27	100	69.673	ENSAPEG00000022281	ddx27	99	70.806	Amphiprion_percula
ENSRNOG00000008081	Ddx27	98	68.085	ENSATEG00000010093	ddx27	99	68.085	Anabas_testudineus
ENSRNOG00000008081	Ddx27	94	77.297	ENSAPLG00000011377	DDX27	98	77.018	Anas_platyrhynchos
ENSRNOG00000008081	Ddx27	100	91.492	ENSANAG00000036257	DDX27	99	92.175	Aotus_nancymaae
ENSRNOG00000008081	Ddx27	99	70.964	ENSACLG00000014992	ddx27	99	71.711	Astatotilapia_calliptera
ENSRNOG00000008081	Ddx27	99	70.930	ENSAMXG00000000911	ddx27	99	71.634	Astyanax_mexicanus
ENSRNOG00000008081	Ddx27	100	90.458	ENSBTAG00000006671	DDX27	99	91.258	Bos_taurus
ENSRNOG00000008081	Ddx27	74	50.258	WBGene00022148	ddx-27	78	49.588	Caenorhabditis_elegans
ENSRNOG00000008081	Ddx27	100	91.885	ENSCJAG00000016135	DDX27	99	91.910	Callithrix_jacchus
ENSRNOG00000008081	Ddx27	99	91.788	ENSCAFG00000011384	DDX27	99	91.017	Canis_familiaris
ENSRNOG00000008081	Ddx27	99	91.788	ENSCAFG00020017143	DDX27	99	91.788	Canis_lupus_dingo
ENSRNOG00000008081	Ddx27	100	90.719	ENSCHIG00000007753	DDX27	99	91.391	Capra_hircus
ENSRNOG00000008081	Ddx27	100	90.850	ENSTSYG00000030362	DDX27	99	92.053	Carlito_syrichta
ENSRNOG00000008081	Ddx27	96	92.234	ENSCAPG00000010800	DDX27	99	91.978	Cavia_aperea
ENSRNOG00000008081	Ddx27	100	92.288	ENSCPOG00000002009	DDX27	99	92.053	Cavia_porcellus
ENSRNOG00000008081	Ddx27	100	91.623	ENSCCAG00000029782	DDX27	96	92.175	Cebus_capucinus
ENSRNOG00000008081	Ddx27	100	91.885	ENSCATG00000034832	DDX27	99	92.440	Cercocebus_atys
ENSRNOG00000008081	Ddx27	100	93.072	ENSCLAG00000008075	DDX27	99	93.245	Chinchilla_lanigera
ENSRNOG00000008081	Ddx27	100	92.408	ENSCSAG00000014996	DDX27	99	92.440	Chlorocebus_sabaeus
ENSRNOG00000008081	Ddx27	99	78.010	ENSCPBG00000026800	DDX27	96	77.997	Chrysemys_picta_bellii
ENSRNOG00000008081	Ddx27	74	62.745	ENSCING00000004235	-	94	56.160	Ciona_intestinalis
ENSRNOG00000008081	Ddx27	65	62.805	ENSCSAVG00000006949	-	99	62.805	Ciona_savignyi
ENSRNOG00000008081	Ddx27	100	87.173	ENSCANG00000038431	DDX27	96	87.401	Colobus_angolensis_palliatus
ENSRNOG00000008081	Ddx27	99	95.358	ENSCGRG00001015330	Ddx27	96	95.093	Cricetulus_griseus_chok1gshd
ENSRNOG00000008081	Ddx27	99	95.358	ENSCGRG00000008199	Ddx27	99	95.093	Cricetulus_griseus_crigri
ENSRNOG00000008081	Ddx27	100	69.615	ENSCSEG00000020260	ddx27	99	70.249	Cynoglossus_semilaevis
ENSRNOG00000008081	Ddx27	100	69.767	ENSCVAG00000011736	ddx27	99	69.987	Cyprinodon_variegatus
ENSRNOG00000008081	Ddx27	99	71.154	ENSDARG00000091831	ddx27	99	72.244	Danio_rerio
ENSRNOG00000008081	Ddx27	100	90.327	ENSDNOG00000019453	DDX27	95	91.391	Dasypus_novemcinctus
ENSRNOG00000008081	Ddx27	99	92.032	ENSDORG00000014137	Ddx27	99	92.032	Dipodomys_ordii
ENSRNOG00000008081	Ddx27	96	47.804	FBgn0021995	Rs1	59	63.169	Drosophila_melanogaster
ENSRNOG00000008081	Ddx27	89	74.747	ENSETEG00000018239	DDX27	85	75.405	Echinops_telfairi
ENSRNOG00000008081	Ddx27	77	72.203	ENSEBUG00000004326	ddx27	95	70.665	Eptatretus_burgeri
ENSRNOG00000008081	Ddx27	100	92.288	ENSEASG00005023342	DDX27	99	92.053	Equus_asinus_asinus
ENSRNOG00000008081	Ddx27	100	92.288	ENSECAG00000020963	DDX27	99	92.053	Equus_caballus
ENSRNOG00000008081	Ddx27	72	88.330	ENSEEUG00000012076	DDX27	69	89.379	Erinaceus_europaeus
ENSRNOG00000008081	Ddx27	99	70.267	ENSELUG00000014535	ddx27	99	71.244	Esox_lucius
ENSRNOG00000008081	Ddx27	100	91.111	ENSFCAG00000001448	DDX27	99	92.318	Felis_catus
ENSRNOG00000008081	Ddx27	93	79.860	ENSFALG00000004884	DDX27	96	79.491	Ficedula_albicollis
ENSRNOG00000008081	Ddx27	100	91.169	ENSFDAG00000018681	DDX27	99	91.184	Fukomys_damarensis
ENSRNOG00000008081	Ddx27	74	76.937	ENSFHEG00000006419	ddx27	92	76.687	Fundulus_heteroclitus
ENSRNOG00000008081	Ddx27	72	70.588	ENSGMOG00000016662	ddx27	83	70.824	Gadus_morhua
ENSRNOG00000008081	Ddx27	99	75.349	ENSGALG00000006974	DDX27	99	77.219	Gallus_gallus
ENSRNOG00000008081	Ddx27	96	69.346	ENSGAFG00000020344	ddx27	96	70.207	Gambusia_affinis
ENSRNOG00000008081	Ddx27	100	69.340	ENSGACG00000003177	ddx27	99	70.106	Gasterosteus_aculeatus
ENSRNOG00000008081	Ddx27	99	78.170	ENSGAGG00000001296	DDX27	99	78.203	Gopherus_agassizii
ENSRNOG00000008081	Ddx27	78	93.144	ENSGGOG00000015474	-	93	93.197	Gorilla_gorilla
ENSRNOG00000008081	Ddx27	99	71.636	ENSHBUG00000008119	ddx27	99	71.842	Haplochromis_burtoni
ENSRNOG00000008081	Ddx27	100	91.765	ENSHGLG00000008388	DDX27	99	91.523	Heterocephalus_glaber_female
ENSRNOG00000008081	Ddx27	100	91.765	ENSHGLG00100000130	DDX27	99	91.523	Heterocephalus_glaber_male
ENSRNOG00000008081	Ddx27	99	70.243	ENSIPUG00000024627	ddx27	99	71.151	Ictalurus_punctatus
ENSRNOG00000008081	Ddx27	99	91.766	ENSSTOG00000003645	DDX27	99	91.766	Ictidomys_tridecemlineatus
ENSRNOG00000008081	Ddx27	99	83.115	ENSJJAG00000009056	Ddx27	99	82.736	Jaculus_jaculus
ENSRNOG00000008081	Ddx27	99	68.325	ENSKMAG00000014889	ddx27	99	69.423	Kryptolebias_marmoratus
ENSRNOG00000008081	Ddx27	96	67.659	ENSLBEG00000022589	ddx27	100	68.200	Labrus_bergylta
ENSRNOG00000008081	Ddx27	99	76.040	ENSLACG00000011592	DDX27	99	76.637	Latimeria_chalumnae
ENSRNOG00000008081	Ddx27	99	73.187	ENSLOCG00000002659	ddx27	98	74.084	Lepisosteus_oculatus
ENSRNOG00000008081	Ddx27	100	90.707	ENSLAFG00000012190	DDX27	99	90.451	Loxodonta_africana
ENSRNOG00000008081	Ddx27	100	92.529	ENSMFAG00000045749	DDX27	99	92.563	Macaca_fascicularis
ENSRNOG00000008081	Ddx27	100	92.661	ENSMMUG00000023621	DDX27	99	92.696	Macaca_mulatta
ENSRNOG00000008081	Ddx27	100	92.661	ENSMNEG00000043931	DDX27	99	92.696	Macaca_nemestrina
ENSRNOG00000008081	Ddx27	100	89.398	ENSMLEG00000028160	DDX27	96	89.920	Mandrillus_leucophaeus
ENSRNOG00000008081	Ddx27	99	70.434	ENSMAMG00000009174	ddx27	93	78.485	Mastacembelus_armatus
ENSRNOG00000008081	Ddx27	99	71.094	ENSMZEG00005008750	ddx27	99	71.842	Maylandia_zebra
ENSRNOG00000008081	Ddx27	90	81.331	ENSMGAG00000008727	DDX27	99	81.085	Meleagris_gallopavo
ENSRNOG00000008081	Ddx27	99	95.086	ENSMAUG00000000552	Ddx27	99	95.618	Mesocricetus_auratus
ENSRNOG00000008081	Ddx27	100	92.288	ENSMICG00000002005	DDX27	99	92.450	Microcebus_murinus
ENSRNOG00000008081	Ddx27	99	95.473	ENSMOCG00000019594	Ddx27	99	95.473	Microtus_ochrogaster
ENSRNOG00000008081	Ddx27	98	66.494	ENSMMOG00000012754	ddx27	99	66.321	Mola_mola
ENSRNOG00000008081	Ddx27	100	87.042	ENSMODG00000016285	DDX27	99	87.003	Monodelphis_domestica
ENSRNOG00000008081	Ddx27	98	70.518	ENSMALG00000020942	ddx27	100	69.210	Monopterus_albus
ENSRNOG00000008081	Ddx27	99	95.739	MGP_CAROLIEiJ_G0024700	Ddx27	99	95.739	Mus_caroli
ENSRNOG00000008081	Ddx27	100	96.583	ENSMUSG00000017999	Ddx27	100	96.583	Mus_musculus
ENSRNOG00000008081	Ddx27	100	96.452	MGP_PahariEiJ_G0026142	Ddx27	100	96.452	Mus_pahari
ENSRNOG00000008081	Ddx27	100	96.583	MGP_SPRETEiJ_G0025620	Ddx27	100	97.400	Mus_spretus
ENSRNOG00000008081	Ddx27	100	89.673	ENSMPUG00000017572	DDX27	98	89.801	Mustela_putorius_furo
ENSRNOG00000008081	Ddx27	100	91.384	ENSMLUG00000003186	DDX27	99	92.063	Myotis_lucifugus
ENSRNOG00000008081	Ddx27	99	92.773	ENSNGAG00000023115	Ddx27	99	92.686	Nannospalax_galili
ENSRNOG00000008081	Ddx27	51	62.916	ENSNBRG00000006206	ddx27	90	62.660	Neolamprologus_brichardi
ENSRNOG00000008081	Ddx27	89	83.796	ENSNLEG00000006961	DDX27	90	84.444	Nomascus_leucogenys
ENSRNOG00000008081	Ddx27	100	82.723	ENSMEUG00000014412	DDX27	97	82.626	Notamacropus_eugenii
ENSRNOG00000008081	Ddx27	100	89.831	ENSOPRG00000014589	DDX27	97	90.066	Ochotona_princeps
ENSRNOG00000008081	Ddx27	99	92.297	ENSODEG00000006281	DDX27	98	92.430	Octodon_degus
ENSRNOG00000008081	Ddx27	99	71.410	ENSONIG00000019473	ddx27	99	71.447	Oreochromis_niloticus
ENSRNOG00000008081	Ddx27	99	81.142	ENSOANG00000006395	DDX27	96	81.275	Ornithorhynchus_anatinus
ENSRNOG00000008081	Ddx27	100	88.151	ENSOCUG00000016108	DDX27	95	88.360	Oryctolagus_cuniculus
ENSRNOG00000008081	Ddx27	99	70.249	ENSORLG00000013059	ddx27	99	70.596	Oryzias_latipes
ENSRNOG00000008081	Ddx27	99	70.159	ENSORLG00020021215	ddx27	99	70.104	Oryzias_latipes_hni
ENSRNOG00000008081	Ddx27	99	69.816	ENSORLG00015017588	ddx27	99	69.894	Oryzias_latipes_hsok
ENSRNOG00000008081	Ddx27	100	70.323	ENSOMEG00000023896	ddx27	99	70.366	Oryzias_melastigma
ENSRNOG00000008081	Ddx27	100	89.231	ENSOGAG00000002130	DDX27	99	89.179	Otolemur_garnettii
ENSRNOG00000008081	Ddx27	92	91.595	ENSOARG00000012345	DDX27	98	92.775	Ovis_aries
ENSRNOG00000008081	Ddx27	100	84.238	ENSPPAG00000035843	DDX27	93	92.899	Pan_paniscus
ENSRNOG00000008081	Ddx27	100	91.099	ENSPPRG00000006728	DDX27	99	92.308	Panthera_pardus
ENSRNOG00000008081	Ddx27	100	91.099	ENSPTIG00000011662	DDX27	99	92.308	Panthera_tigris_altaica
ENSRNOG00000008081	Ddx27	100	92.288	ENSPTRG00000013602	DDX27	99	91.546	Pan_troglodytes
ENSRNOG00000008081	Ddx27	100	85.621	ENSPANG00000000820	DDX27	99	85.563	Papio_anubis
ENSRNOG00000008081	Ddx27	99	70.356	ENSPKIG00000002802	ddx27	99	70.551	Paramormyrops_kingsleyae
ENSRNOG00000008081	Ddx27	89	79.855	ENSPSIG00000014493	DDX27	99	80.059	Pelodiscus_sinensis
ENSRNOG00000008081	Ddx27	98	67.503	ENSPMGG00000013002	ddx27	99	68.000	Periophthalmus_magnuspinnatus
ENSRNOG00000008081	Ddx27	99	95.073	ENSPEMG00000023215	Ddx27	99	95.073	Peromyscus_maniculatus_bairdii
ENSRNOG00000008081	Ddx27	99	64.798	ENSPMAG00000003094	ddx27	95	66.359	Petromyzon_marinus
ENSRNOG00000008081	Ddx27	78	91.540	ENSPCIG00000008052	DDX27	97	91.566	Phascolarctos_cinereus
ENSRNOG00000008081	Ddx27	96	69.959	ENSPFOG00000012217	ddx27	100	70.501	Poecilia_formosa
ENSRNOG00000008081	Ddx27	99	68.840	ENSPLAG00000005431	ddx27	99	69.974	Poecilia_latipinna
ENSRNOG00000008081	Ddx27	67	77.148	ENSPMEG00000005563	ddx27	99	77.148	Poecilia_mexicana
ENSRNOG00000008081	Ddx27	100	91.765	ENSPPYG00000011113	DDX27	99	92.583	Pongo_abelii
ENSRNOG00000008081	Ddx27	100	91.775	ENSPCOG00000025327	DDX27	96	91.931	Propithecus_coquereli
ENSRNOG00000008081	Ddx27	100	91.754	ENSPVAG00000006308	DDX27	95	92.440	Pteropus_vampyrus
ENSRNOG00000008081	Ddx27	83	71.969	ENSPNYG00000014670	ddx27	98	72.370	Pundamilia_nyererei
ENSRNOG00000008081	Ddx27	99	71.374	ENSPNAG00000016043	ddx27	99	71.912	Pygocentrus_nattereri
ENSRNOG00000008081	Ddx27	100	86.352	ENSRBIG00000024112	DDX27	96	86.303	Rhinopithecus_bieti
ENSRNOG00000008081	Ddx27	100	91.623	ENSRROG00000024811	DDX27	99	92.175	Rhinopithecus_roxellana
ENSRNOG00000008081	Ddx27	61	44.654	YLL008W	-	74	41.281	Saccharomyces_cerevisiae
ENSRNOG00000008081	Ddx27	100	91.503	ENSSBOG00000034281	DDX27	99	92.185	Saimiri_boliviensis_boliviensis
ENSRNOG00000008081	Ddx27	100	68.509	ENSSMAG00000006972	ddx27	99	68.848	Scophthalmus_maximus
ENSRNOG00000008081	Ddx27	100	70.935	ENSSDUG00000018855	ddx27	99	68.212	Seriola_dumerili
ENSRNOG00000008081	Ddx27	100	68.974	ENSSLDG00000004114	ddx27	99	70.542	Seriola_lalandi_dorsalis
ENSRNOG00000008081	Ddx27	88	79.346	ENSSPUG00000015687	DDX27	99	79.367	Sphenodon_punctatus
ENSRNOG00000008081	Ddx27	96	68.622	ENSSPAG00000007670	ddx27	100	69.304	Stegastes_partitus
ENSRNOG00000008081	Ddx27	100	92.398	ENSSSCG00000022915	DDX27	99	92.430	Sus_scrofa
ENSRNOG00000008081	Ddx27	99	77.646	ENSTGUG00000005649	DDX27	99	77.467	Taeniopygia_guttata
ENSRNOG00000008081	Ddx27	92	68.227	ENSTRUG00000002089	ddx27	97	68.227	Takifugu_rubripes
ENSRNOG00000008081	Ddx27	99	69.412	ENSTNIG00000002987	ddx27	99	69.404	Tetraodon_nigroviridis
ENSRNOG00000008081	Ddx27	100	84.797	ENSTBEG00000005320	DDX27	95	85.220	Tupaia_belangeri
ENSRNOG00000008081	Ddx27	100	90.838	ENSTTRG00000004288	DDX27	95	91.379	Tursiops_truncatus
ENSRNOG00000008081	Ddx27	87	91.128	ENSUAMG00000025519	DDX27	90	91.265	Ursus_americanus
ENSRNOG00000008081	Ddx27	99	91.391	ENSUMAG00000024473	DDX27	99	91.391	Ursus_maritimus
ENSRNOG00000008081	Ddx27	85	90.615	ENSVPAG00000001314	DDX27	86	90.615	Vicugna_pacos
ENSRNOG00000008081	Ddx27	99	91.788	ENSVVUG00000022331	DDX27	99	91.788	Vulpes_vulpes
ENSRNOG00000008081	Ddx27	99	75.395	ENSXETG00000017231	ddx27	99	75.332	Xenopus_tropicalis
ENSRNOG00000008081	Ddx27	98	69.640	ENSXCOG00000017180	ddx27	99	70.916	Xiphophorus_couchianus
ENSRNOG00000008081	Ddx27	100	68.442	ENSXMAG00000012284	ddx27	99	70.317	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005694	chromosome	-	IEA	Component
GO:0005694	chromosome	-	ISO	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0006364	rRNA processing	-	IEA	Process
GO:0006364	rRNA processing	-	ISO	Process