EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000008156 (Gene tree)
Gene ID: 312947
Gene Symbol: Tgs1
Alias: LOC312947|Ncoa6ip|PIMT|PIPMT
Full Name: trimethylguanosine synthase 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 33526 bases
Position: chr5:16413356-16446881
Accession: 1309953
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000010783	Methyltransf_15	PF09445.10	7.5e-42	1	1
ENSRNOP00000010783	UPF0020	PF01170.18	7.8e-06	1	1
ENSRNOP00000010783	Met_10	PF02475.16	7.8e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000010783	-	4305	XM_006237833	ENSRNOP00000010783	850 (aa)	XP_017448817	P85107

Gene Model

Click here to download ENSRNOG00000008156's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000008156's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000008156	Tgs1	99	72.547	ENSG00000137574	TGS1	99	72.664	Homo_sapiens
ENSRNOG00000008156	Tgs1	66	38.758	ENSAPOG00000004321	-	99	38.176	Acanthochromis_polyacanthus
ENSRNOG00000008156	Tgs1	99	71.696	ENSAMEG00000001781	TGS1	100	71.828	Ailuropoda_melanoleuca
ENSRNOG00000008156	Tgs1	96	38.293	ENSAOCG00000022799	lyn	96	38.647	Amphiprion_ocellaris
ENSRNOG00000008156	Tgs1	76	42.197	ENSAPEG00000019723	TGS1	96	41.679	Amphiprion_percula
ENSRNOG00000008156	Tgs1	92	35.105	ENSATEG00000005927	lyn	91	35.229	Anabas_testudineus
ENSRNOG00000008156	Tgs1	77	49.787	ENSAPLG00000006073	-	100	50.499	Anas_platyrhynchos
ENSRNOG00000008156	Tgs1	98	47.519	ENSACAG00000017988	TGS1	92	47.850	Anolis_carolinensis
ENSRNOG00000008156	Tgs1	99	67.020	ENSANAG00000035525	TGS1	99	67.491	Aotus_nancymaae
ENSRNOG00000008156	Tgs1	98	38.364	ENSACLG00000000261	lyn	98	38.525	Astatotilapia_calliptera
ENSRNOG00000008156	Tgs1	98	39.039	ENSAMXG00000014086	lyn	97	39.315	Astyanax_mexicanus
ENSRNOG00000008156	Tgs1	99	67.407	ENSBTAG00000005898	TGS1	99	67.640	Bos_taurus
ENSRNOG00000008156	Tgs1	99	71.379	ENSCJAG00000016657	TGS1	98	71.729	Callithrix_jacchus
ENSRNOG00000008156	Tgs1	99	71.111	ENSCAFG00000007011	TGS1	100	71.246	Canis_familiaris
ENSRNOG00000008156	Tgs1	99	70.141	ENSCAFG00020015485	TGS1	100	70.280	Canis_lupus_dingo
ENSRNOG00000008156	Tgs1	99	67.330	ENSCHIG00000013976	TGS1	99	67.447	Capra_hircus
ENSRNOG00000008156	Tgs1	99	72.749	ENSTSYG00000000171	TGS1	99	72.865	Carlito_syrichta
ENSRNOG00000008156	Tgs1	96	65.074	ENSCAPG00000013732	TGS1	99	64.951	Cavia_aperea
ENSRNOG00000008156	Tgs1	100	69.231	ENSCPOG00000009713	TGS1	99	69.231	Cavia_porcellus
ENSRNOG00000008156	Tgs1	99	71.911	ENSCCAG00000030476	TGS1	98	72.028	Cebus_capucinus
ENSRNOG00000008156	Tgs1	99	72.664	ENSCATG00000035375	TGS1	99	72.547	Cercocebus_atys
ENSRNOG00000008156	Tgs1	100	71.212	ENSCLAG00000009468	TGS1	99	71.096	Chinchilla_lanigera
ENSRNOG00000008156	Tgs1	93	70.037	ENSCSAG00000014611	TGS1	99	70.287	Chlorocebus_sabaeus
ENSRNOG00000008156	Tgs1	99	67.016	ENSCHOG00000001462	TGS1	100	66.900	Choloepus_hoffmanni
ENSRNOG00000008156	Tgs1	98	51.802	ENSCPBG00000004958	TGS1	99	52.815	Chrysemys_picta_bellii
ENSRNOG00000008156	Tgs1	99	71.963	ENSCANG00000041389	TGS1	99	72.079	Colobus_angolensis_palliatus
ENSRNOG00000008156	Tgs1	99	81.722	ENSCGRG00001019470	Tgs1	99	81.368	Cricetulus_griseus_chok1gshd
ENSRNOG00000008156	Tgs1	99	81.690	ENSCGRG00000008981	Tgs1	99	81.925	Cricetulus_griseus_crigri
ENSRNOG00000008156	Tgs1	98	37.355	ENSDARG00000107511	lyn	99	75.000	Danio_rerio
ENSRNOG00000008156	Tgs1	99	69.509	ENSDNOG00000008353	TGS1	99	69.393	Dasypus_novemcinctus
ENSRNOG00000008156	Tgs1	99	72.170	ENSDORG00000012484	Tgs1	99	72.052	Dipodomys_ordii
ENSRNOG00000008156	Tgs1	81	62.281	ENSETEG00000005126	TGS1	85	62.281	Echinops_telfairi
ENSRNOG00000008156	Tgs1	92	71.447	ENSEASG00005016371	TGS1	95	71.572	Equus_asinus_asinus
ENSRNOG00000008156	Tgs1	99	73.108	ENSECAG00000019399	TGS1	99	73.225	Equus_caballus
ENSRNOG00000008156	Tgs1	70	91.803	ENSEEUG00000001735	TGS1	71	91.803	Erinaceus_europaeus
ENSRNOG00000008156	Tgs1	98	38.293	ENSELUG00000012537	lyn	99	39.080	Esox_lucius
ENSRNOG00000008156	Tgs1	99	71.780	ENSFCAG00000011478	TGS1	100	71.911	Felis_catus
ENSRNOG00000008156	Tgs1	88	49.054	ENSFALG00000010249	TGS1	99	49.749	Ficedula_albicollis
ENSRNOG00000008156	Tgs1	99	72.535	ENSFDAG00000011405	TGS1	99	72.535	Fukomys_damarensis
ENSRNOG00000008156	Tgs1	96	48.970	ENSGALG00000015340	TGS1	97	49.314	Gallus_gallus
ENSRNOG00000008156	Tgs1	98	52.868	ENSGAGG00000019590	TGS1	99	52.921	Gopherus_agassizii
ENSRNOG00000008156	Tgs1	99	72.780	ENSGGOG00000008624	TGS1	99	72.897	Gorilla_gorilla
ENSRNOG00000008156	Tgs1	69	37.460	ENSHBUG00000003518	lyn	100	38.134	Haplochromis_burtoni
ENSRNOG00000008156	Tgs1	72	84.058	ENSHGLG00000000284	TGS1	88	84.058	Heterocephalus_glaber_female
ENSRNOG00000008156	Tgs1	99	38.594	ENSHCOG00000014161	lyn	99	38.330	Hippocampus_comes
ENSRNOG00000008156	Tgs1	99	73.059	ENSSTOG00000009597	TGS1	99	73.412	Ictidomys_tridecemlineatus
ENSRNOG00000008156	Tgs1	99	72.373	ENSJJAG00000016239	Tgs1	100	72.137	Jaculus_jaculus
ENSRNOG00000008156	Tgs1	96	38.228	ENSKMAG00000019371	-	97	37.428	Kryptolebias_marmoratus
ENSRNOG00000008156	Tgs1	98	38.480	ENSLBEG00000027341	-	98	39.115	Labrus_bergylta
ENSRNOG00000008156	Tgs1	99	45.111	ENSLACG00000008074	TGS1	100	45.183	Latimeria_chalumnae
ENSRNOG00000008156	Tgs1	76	44.088	ENSLOCG00000005492	lyn	99	42.227	Lepisosteus_oculatus
ENSRNOG00000008156	Tgs1	99	69.006	ENSLAFG00000015386	TGS1	99	69.006	Loxodonta_africana
ENSRNOG00000008156	Tgs1	99	72.780	ENSMFAG00000029838	TGS1	99	72.897	Macaca_fascicularis
ENSRNOG00000008156	Tgs1	99	71.963	ENSMMUG00000005478	TGS1	99	72.196	Macaca_mulatta
ENSRNOG00000008156	Tgs1	99	72.664	ENSMNEG00000023719	TGS1	99	72.780	Macaca_nemestrina
ENSRNOG00000008156	Tgs1	99	72.664	ENSMLEG00000034807	TGS1	99	72.780	Mandrillus_leucophaeus
ENSRNOG00000008156	Tgs1	98	37.939	ENSMAMG00000009542	TGS1	83	74.884	Mastacembelus_armatus
ENSRNOG00000008156	Tgs1	98	38.364	ENSMZEG00005015681	lyn	98	38.525	Maylandia_zebra
ENSRNOG00000008156	Tgs1	82	49.933	ENSMGAG00000010966	TGS1	98	48.964	Meleagris_gallopavo
ENSRNOG00000008156	Tgs1	99	81.573	ENSMAUG00000009875	Tgs1	99	81.455	Mesocricetus_auratus
ENSRNOG00000008156	Tgs1	99	74.182	ENSMICG00000011199	TGS1	99	74.065	Microcebus_murinus
ENSRNOG00000008156	Tgs1	99	79.201	ENSMOCG00000019560	Tgs1	100	79.201	Microtus_ochrogaster
ENSRNOG00000008156	Tgs1	57	46.696	ENSMMOG00000021495	lyn	70	69.863	Mola_mola
ENSRNOG00000008156	Tgs1	87	61.784	ENSMODG00000009174	TGS1	99	62.184	Monodelphis_domestica
ENSRNOG00000008156	Tgs1	99	88.061	MGP_CAROLIEiJ_G0025779	-	99	88.416	Mus_caroli
ENSRNOG00000008156	Tgs1	99	80.536	MGP_CAROLIEiJ_G0025780	-	98	80.886	Mus_caroli
ENSRNOG00000008156	Tgs1	99	87.707	ENSMUSG00000028233	Tgs1	99	88.298	Mus_musculus
ENSRNOG00000008156	Tgs1	99	82.030	MGP_PahariEiJ_G0023902	-	98	82.030	Mus_pahari
ENSRNOG00000008156	Tgs1	99	89.349	MGP_PahariEiJ_G0023901	-	99	89.349	Mus_pahari
ENSRNOG00000008156	Tgs1	99	87.589	MGP_SPRETEiJ_G0026727	-	99	88.180	Mus_spretus
ENSRNOG00000008156	Tgs1	57	86.989	MGP_SPRETEiJ_G0026726	-	97	85.520	Mus_spretus
ENSRNOG00000008156	Tgs1	92	69.395	ENSMPUG00000010475	TGS1	99	69.811	Mustela_putorius_furo
ENSRNOG00000008156	Tgs1	99	68.917	ENSMLUG00000014857	TGS1	100	68.801	Myotis_lucifugus
ENSRNOG00000008156	Tgs1	99	76.498	ENSNGAG00000019532	Tgs1	99	76.616	Nannospalax_galili
ENSRNOG00000008156	Tgs1	99	72.196	ENSNLEG00000001101	TGS1	99	72.313	Nomascus_leucogenys
ENSRNOG00000008156	Tgs1	92	59.320	ENSMEUG00000001697	TGS1	99	59.446	Notamacropus_eugenii
ENSRNOG00000008156	Tgs1	91	63.566	ENSODEG00000002948	TGS1	100	63.566	Octodon_degus
ENSRNOG00000008156	Tgs1	51	49.887	ENSONIG00000006339	lyn	97	40.833	Oreochromis_niloticus
ENSRNOG00000008156	Tgs1	89	59.795	ENSOANG00000021853	TGS1	98	59.795	Ornithorhynchus_anatinus
ENSRNOG00000008156	Tgs1	99	71.111	ENSOCUG00000017522	TGS1	99	71.111	Oryctolagus_cuniculus
ENSRNOG00000008156	Tgs1	99	71.995	ENSOGAG00000012572	TGS1	99	71.995	Otolemur_garnettii
ENSRNOG00000008156	Tgs1	99	67.173	ENSOARG00000014613	TGS1	99	67.290	Ovis_aries
ENSRNOG00000008156	Tgs1	99	72.664	ENSPPAG00000039058	TGS1	99	72.780	Pan_paniscus
ENSRNOG00000008156	Tgs1	99	70.960	ENSPPRG00000000677	TGS1	100	71.096	Panthera_pardus
ENSRNOG00000008156	Tgs1	99	71.194	ENSPTIG00000005122	TGS1	100	71.329	Panthera_tigris_altaica
ENSRNOG00000008156	Tgs1	99	72.430	ENSPTRG00000020262	TGS1	99	72.547	Pan_troglodytes
ENSRNOG00000008156	Tgs1	99	72.547	ENSPANG00000018910	TGS1	99	72.664	Papio_anubis
ENSRNOG00000008156	Tgs1	99	52.386	ENSPSIG00000014983	TGS1	99	53.296	Pelodiscus_sinensis
ENSRNOG00000008156	Tgs1	99	82.311	ENSPEMG00000007957	Tgs1	99	82.471	Peromyscus_maniculatus_bairdii
ENSRNOG00000008156	Tgs1	99	62.631	ENSPCIG00000016232	TGS1	98	62.747	Phascolarctos_cinereus
ENSRNOG00000008156	Tgs1	76	40.359	ENSPFOG00000001545	-	99	40.240	Poecilia_formosa
ENSRNOG00000008156	Tgs1	91	34.788	ENSPREG00000012261	-	99	34.788	Poecilia_reticulata
ENSRNOG00000008156	Tgs1	99	72.664	ENSPPYG00000018597	TGS1	99	72.664	Pongo_abelii
ENSRNOG00000008156	Tgs1	99	67.057	ENSPCAG00000000143	TGS1	99	66.940	Procavia_capensis
ENSRNOG00000008156	Tgs1	99	74.065	ENSPCOG00000013537	TGS1	99	73.949	Propithecus_coquereli
ENSRNOG00000008156	Tgs1	99	65.967	ENSPVAG00000016399	TGS1	100	65.851	Pteropus_vampyrus
ENSRNOG00000008156	Tgs1	89	38.819	ENSPNYG00000023004	lyn	87	39.570	Pundamilia_nyererei
ENSRNOG00000008156	Tgs1	97	38.325	ENSPNAG00000022249	lyn	97	38.941	Pygocentrus_nattereri
ENSRNOG00000008156	Tgs1	99	70.561	ENSRBIG00000041893	TGS1	99	70.911	Rhinopithecus_bieti
ENSRNOG00000008156	Tgs1	99	72.547	ENSRROG00000035127	TGS1	99	72.664	Rhinopithecus_roxellana
ENSRNOG00000008156	Tgs1	95	71.255	ENSSBOG00000024469	TGS1	99	71.255	Saimiri_boliviensis_boliviensis
ENSRNOG00000008156	Tgs1	99	60.603	ENSSHAG00000012878	TGS1	98	60.834	Sarcophilus_harrisii
ENSRNOG00000008156	Tgs1	97	38.150	ENSSFOG00015001308	tgs1	96	38.310	Scleropages_formosus
ENSRNOG00000008156	Tgs1	96	38.259	ENSSMAG00000019469	lyn	96	39.033	Scophthalmus_maximus
ENSRNOG00000008156	Tgs1	90	64.258	ENSSSCG00000006251	TGS1	98	64.387	Sus_scrofa
ENSRNOG00000008156	Tgs1	96	51.257	ENSTGUG00000011050	TGS1	100	51.497	Taeniopygia_guttata
ENSRNOG00000008156	Tgs1	53	68.372	ENSTRUG00000009532	lyn	66	68.372	Takifugu_rubripes
ENSRNOG00000008156	Tgs1	89	38.314	ENSTNIG00000018133	lyn	99	38.938	Tetraodon_nigroviridis
ENSRNOG00000008156	Tgs1	84	98.276	ENSTBEG00000010953	TGS1	85	98.276	Tupaia_belangeri
ENSRNOG00000008156	Tgs1	93	75.000	ENSTTRG00000017239	TGS1	100	63.785	Tursiops_truncatus
ENSRNOG00000008156	Tgs1	99	70.712	ENSUAMG00000027718	TGS1	100	70.712	Ursus_americanus
ENSRNOG00000008156	Tgs1	92	69.811	ENSUMAG00000009761	TGS1	99	69.811	Ursus_maritimus
ENSRNOG00000008156	Tgs1	84	64.641	ENSVPAG00000001166	TGS1	88	64.641	Vicugna_pacos
ENSRNOG00000008156	Tgs1	92	68.647	ENSVVUG00000017821	TGS1	99	68.805	Vulpes_vulpes
ENSRNOG00000008156	Tgs1	99	44.218	ENSXETG00000005648	tgs1	100	45.011	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0009452	7-methylguanosine RNA capping	-	IEA	Process
GO:0015030	Cajal body	-	IEA	Component
GO:0036261	7-methylguanosine cap hypermethylation	21873635.	IBA	Process
GO:0036261	7-methylguanosine cap hypermethylation	-	ISO	Process
GO:0071164	RNA trimethylguanosine synthase activity	21873635.	IBA	Function
GO:0071164	RNA trimethylguanosine synthase activity	-	ISO	Function