EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000008239 (Gene tree)
Gene ID: 445541
Gene Symbol: Repin1
Alias: Ap-4|Ap4
Full Name: replication initiator 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 3450 bases
Position: chr4:78233332-78236781
Accession: 1549707
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000011032	zf-C2H2	PF00096.26	1.8e-67	1	10
ENSRNOP00000011032	zf-C2H2	PF00096.26	1.8e-67	2	10
ENSRNOP00000011032	zf-C2H2	PF00096.26	1.8e-67	3	10
ENSRNOP00000011032	zf-C2H2	PF00096.26	1.8e-67	4	10
ENSRNOP00000011032	zf-C2H2	PF00096.26	1.8e-67	5	10
ENSRNOP00000011032	zf-C2H2	PF00096.26	1.8e-67	6	10
ENSRNOP00000011032	zf-C2H2	PF00096.26	1.8e-67	7	10
ENSRNOP00000011032	zf-C2H2	PF00096.26	1.8e-67	8	10
ENSRNOP00000011032	zf-C2H2	PF00096.26	1.8e-67	9	10
ENSRNOP00000011032	zf-C2H2	PF00096.26	1.8e-67	10	10
ENSRNOP00000011032	zf-met	PF12874.7	1.9e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000011032	-	2243	XM_006236423	ENSRNOP00000011032	604 (aa)	XP_006236485	A0A0H2UHG5

Gene Model

Click here to download ENSRNOG00000008239's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000008239's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000008239	Repin1	84	35.829	ENSRNOG00000052406	LOC102552527	81	35.829
ENSRNOG00000008239	Repin1	91	32.227	ENSRNOG00000016417	Zfp136	94	31.991
ENSRNOG00000008239	Repin1	83	35.938	ENSRNOG00000025937	Zfp26	83	35.714
ENSRNOG00000008239	Repin1	82	35.887	ENSRNOG00000048394	Zfp560	74	36.810
ENSRNOG00000008239	Repin1	82	33.913	ENSRNOG00000028628	LOC100911196	84	31.599
ENSRNOG00000008239	Repin1	92	32.101	ENSRNOG00000049259	LOC102549842	94	31.524
ENSRNOG00000008239	Repin1	70	39.506	ENSRNOG00000009594	Snai1	58	39.506
ENSRNOG00000008239	Repin1	82	40.058	ENSRNOG00000029490	Znf768	51	47.090
ENSRNOG00000008239	Repin1	84	40.166	ENSRNOG00000030517	Zfp879	69	39.296
ENSRNOG00000008239	Repin1	92	44.660	ENSRNOG00000019059	Zfp1	73	44.660
ENSRNOG00000008239	Repin1	84	38.276	ENSRNOG00000015188	AABR07053681.1	80	38.276
ENSRNOG00000008239	Repin1	84	35.976	ENSRNOG00000024056	Zfp17	77	35.976
ENSRNOG00000008239	Repin1	78	30.901	ENSRNOG00000007576	Zfp597	68	30.830
ENSRNOG00000008239	Repin1	82	38.421	ENSRNOG00000042777	Zfp28	62	33.735
ENSRNOG00000008239	Repin1	82	36.782	ENSRNOG00000022431	Zfp867	81	36.782
ENSRNOG00000008239	Repin1	69	41.772	ENSRNOG00000013586	Snai3	55	41.772
ENSRNOG00000008239	Repin1	87	35.366	ENSRNOG00000014658	Zfp423	98	35.366
ENSRNOG00000008239	Repin1	83	35.333	ENSRNOG00000002713	Zfp672	94	35.667
ENSRNOG00000008239	Repin1	84	36.310	ENSRNOG00000006684	Zfp317	86	36.310
ENSRNOG00000008239	Repin1	82	35.484	ENSRNOG00000043341	Zfp51	82	33.603
ENSRNOG00000008239	Repin1	72	37.500	ENSRNOG00000047699	Snai2	62	37.500
ENSRNOG00000008239	Repin1	82	41.196	ENSRNOG00000030308	Zfp251	69	41.509
ENSRNOG00000008239	Repin1	82	31.778	ENSRNOG00000055761	Zfp574	96	34.165
ENSRNOG00000008239	Repin1	83	45.570	ENSRNOG00000032625	AC118165.1	99	39.935
ENSRNOG00000008239	Repin1	86	38.261	ENSRNOG00000016874	Zfp521	86	38.261
ENSRNOG00000008239	Repin1	82	36.164	ENSRNOG00000014331	Zfp810	88	37.736
ENSRNOG00000008239	Repin1	83	36.105	ENSRNOG00000014712	Zfp39	61	37.113
ENSRNOG00000008239	Repin1	85	42.925	ENSRNOG00000003455	Zfp13	61	42.925
ENSRNOG00000008239	Repin1	72	33.953	ENSRNOG00000016279	Zfp865	66	34.101
ENSRNOG00000008239	Repin1	83	39.109	ENSRNOG00000010436	Zbtb17	57	39.109
ENSRNOG00000008239	Repin1	86	42.857	ENSRNOG00000019416	Zfp61	73	42.857
ENSRNOG00000008239	Repin1	84	33.065	ENSRNOG00000061533	AABR07001926.3	83	34.579

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000008239	Repin1	91	83.759	ENSCHIG00000019982	REPIN1	100	84.000	Capra_hircus
ENSRNOG00000008239	Repin1	98	90.404	ENSCGRG00001017330	Repin1	98	90.404	Cricetulus_griseus_chok1gshd
ENSRNOG00000008239	Repin1	99	89.333	ENSCGRG00000015472	Repin1	100	89.333	Cricetulus_griseus_crigri
ENSRNOG00000008239	Repin1	99	86.281	ENSMAUG00000005776	Repin1	100	91.257	Mesocricetus_auratus
ENSRNOG00000008239	Repin1	100	92.881	ENSMOCG00000021124	Repin1	100	92.881	Microtus_ochrogaster
ENSRNOG00000008239	Repin1	91	53.474	ENSMODG00000003616	-	93	52.842	Monodelphis_domestica
ENSRNOG00000008239	Repin1	100	95.033	MGP_CAROLIEiJ_G0028343	Repin1	100	95.620	Mus_caroli
ENSRNOG00000008239	Repin1	100	95.033	ENSMUSG00000052751	Repin1	100	95.620	Mus_musculus
ENSRNOG00000008239	Repin1	100	95.199	MGP_PahariEiJ_G0022097	Repin1	100	95.985	Mus_pahari
ENSRNOG00000008239	Repin1	100	95.033	MGP_SPRETEiJ_G0029346	Repin1	100	95.803	Mus_spretus
ENSRNOG00000008239	Repin1	100	91.391	ENSPEMG00000000870	Repin1	100	91.391	Peromyscus_maniculatus_bairdii

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005811	lipid droplet	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006260	DNA replication	-	IEA	Process
GO:0022626	cytosolic ribosome	-	ISO	Component
GO:0031965	nuclear membrane	-	ISO	Component
GO:0046326	positive regulation of glucose import	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:2000191	regulation of fatty acid transport	-	ISO	Process