EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000008291 (Gene tree)
Gene ID: 313851
Gene Symbol: Thumpd2
Alias: LOC313851|MGC108999
Full Name: THUMP domain containing 2
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 51428 bases
Position: chr6:3743074-3794501
Accession: 1306878
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000011000	MTS	PF05175.14	1.5e-05	1	1
ENSRNOP00000011000	UPF0020	PF01170.18	1e-25	1	1
ENSRNOP00000075202	UPF0020	PF01170.18	2.6e-24	1	1
ENSRNOP00000071513	UPF0020	PF01170.18	1.9e-17	1	1
ENSRNOP00000011000	Methyltransf_31	PF13847.6	3.8e-12	1	1
ENSRNOP00000071513	Methyltransf_31	PF13847.6	7.1e-09	1	1
ENSRNOP00000075202	Methyltransf_31	PF13847.6	1e-08	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000084499	-	1849	XM_006239673	ENSRNOP00000071513	409 (aa)	XP_006239735	A0A0G2K0N2
ENSRNOT00000087891	-	1943	XM_006239675	ENSRNOP00000075202	441 (aa)	XP_006239737	A0A0G2KA02
ENSRNOT00000011000	-	1825	XM_006239672	ENSRNOP00000011000	549 (aa)	XP_006239734	D4A475

Gene Model

Click here to download ENSRNOG00000008291's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000008291's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000008291	Thumpd2	90	67.337	ENSG00000138050	THUMPD2	89	82.051	Homo_sapiens
ENSRNOG00000008291	Thumpd2	66	50.254	ENSAPOG00000001802	-	67	43.854	Acanthochromis_polyacanthus
ENSRNOG00000008291	Thumpd2	80	68.820	ENSAMEG00000008664	THUMPD2	99	64.425	Ailuropoda_melanoleuca
ENSRNOG00000008291	Thumpd2	59	47.692	ENSACIG00000011677	THUMPD2	63	47.475	Amphilophus_citrinellus
ENSRNOG00000008291	Thumpd2	67	48.731	ENSAOCG00000000927	THUMPD2	67	41.860	Amphiprion_ocellaris
ENSRNOG00000008291	Thumpd2	67	49.239	ENSAPEG00000000981	thumpd2	67	41.026	Amphiprion_percula
ENSRNOG00000008291	Thumpd2	76	47.826	ENSATEG00000012329	thumpd2	66	42.947	Anabas_testudineus
ENSRNOG00000008291	Thumpd2	83	50.798	ENSAPLG00000008775	THUMPD2	99	47.648	Anas_platyrhynchos
ENSRNOG00000008291	Thumpd2	85	45.306	ENSACAG00000000538	THUMPD2	98	45.306	Anolis_carolinensis
ENSRNOG00000008291	Thumpd2	90	67.085	ENSANAG00000034298	THUMPD2	100	65.278	Aotus_nancymaae
ENSRNOG00000008291	Thumpd2	88	37.073	ENSACLG00000025840	thumpd2	93	43.878	Astatotilapia_calliptera
ENSRNOG00000008291	Thumpd2	87	35.751	ENSAMXG00000011080	thumpd2	97	35.331	Astyanax_mexicanus
ENSRNOG00000008291	Thumpd2	90	67.085	ENSBTAG00000004722	THUMPD2	99	62.823	Bos_taurus
ENSRNOG00000008291	Thumpd2	90	66.583	ENSCJAG00000014891	THUMPD2	100	64.881	Callithrix_jacchus
ENSRNOG00000008291	Thumpd2	90	68.766	ENSCAFG00000006471	THUMPD2	100	65.805	Canis_familiaris
ENSRNOG00000008291	Thumpd2	83	68.392	ENSCAFG00020021695	THUMPD2	100	65.328	Canis_lupus_dingo
ENSRNOG00000008291	Thumpd2	90	66.583	ENSCHIG00000013921	THUMPD2	99	62.823	Capra_hircus
ENSRNOG00000008291	Thumpd2	81	66.295	ENSTSYG00000010555	THUMPD2	99	61.463	Carlito_syrichta
ENSRNOG00000008291	Thumpd2	90	69.500	ENSCPOG00000003368	THUMPD2	100	65.415	Cavia_porcellus
ENSRNOG00000008291	Thumpd2	90	66.584	ENSCCAG00000034405	THUMPD2	100	65.089	Cebus_capucinus
ENSRNOG00000008291	Thumpd2	90	67.839	ENSCATG00000012396	THUMPD2	100	66.071	Cercocebus_atys
ENSRNOG00000008291	Thumpd2	90	67.669	ENSCLAG00000003029	THUMPD2	99	63.889	Chinchilla_lanigera
ENSRNOG00000008291	Thumpd2	74	63.747	ENSCSAG00000012431	THUMPD2	100	63.747	Chlorocebus_sabaeus
ENSRNOG00000008291	Thumpd2	80	58.873	ENSCHOG00000000360	THUMPD2	100	58.873	Choloepus_hoffmanni
ENSRNOG00000008291	Thumpd2	90	57.212	ENSCPBG00000018272	THUMPD2	98	52.941	Chrysemys_picta_bellii
ENSRNOG00000008291	Thumpd2	90	67.588	ENSCANG00000032596	THUMPD2	100	66.071	Colobus_angolensis_palliatus
ENSRNOG00000008291	Thumpd2	96	76.038	ENSCGRG00001009939	Thumpd2	100	76.038	Cricetulus_griseus_chok1gshd
ENSRNOG00000008291	Thumpd2	85	74.681	ENSCGRG00000006284	Thumpd2	100	74.681	Cricetulus_griseus_crigri
ENSRNOG00000008291	Thumpd2	86	36.504	ENSDARG00000093070	thumpd2	98	35.670	Danio_rerio
ENSRNOG00000008291	Thumpd2	88	67.179	ENSDNOG00000019834	THUMPD2	98	63.911	Dasypus_novemcinctus
ENSRNOG00000008291	Thumpd2	83	53.996	ENSETEG00000001300	THUMPD2	99	53.996	Echinops_telfairi
ENSRNOG00000008291	Thumpd2	53	41.311	ENSEBUG00000010906	THUMPD2	89	41.311	Eptatretus_burgeri
ENSRNOG00000008291	Thumpd2	90	68.766	ENSEASG00005005106	THUMPD2	99	65.107	Equus_asinus_asinus
ENSRNOG00000008291	Thumpd2	90	68.262	ENSECAG00000010799	THUMPD2	99	64.547	Equus_caballus
ENSRNOG00000008291	Thumpd2	80	55.914	ENSEEUG00000000105	THUMPD2	100	50.947	Erinaceus_europaeus
ENSRNOG00000008291	Thumpd2	90	40.194	ENSELUG00000003735	thumpd2	92	38.723	Esox_lucius
ENSRNOG00000008291	Thumpd2	90	68.421	ENSFCAG00000006809	THUMPD2	100	65.545	Felis_catus
ENSRNOG00000008291	Thumpd2	81	51.351	ENSFALG00000008655	THUMPD2	90	48.441	Ficedula_albicollis
ENSRNOG00000008291	Thumpd2	99	35.331	ENSFHEG00000011402	thumpd2	99	35.978	Fundulus_heteroclitus
ENSRNOG00000008291	Thumpd2	67	32.710	ENSGMOG00000002236	-	100	35.274	Gadus_morhua
ENSRNOG00000008291	Thumpd2	75	47.917	ENSGALG00000009119	THUMPD2	99	47.917	Gallus_gallus
ENSRNOG00000008291	Thumpd2	86	38.015	ENSGAFG00000012683	thumpd2	99	35.225	Gambusia_affinis
ENSRNOG00000008291	Thumpd2	69	46.366	ENSGAGG00000001325	THUMPD2	98	46.366	Gopherus_agassizii
ENSRNOG00000008291	Thumpd2	90	67.337	ENSGGOG00000001608	THUMPD2	100	66.270	Gorilla_gorilla
ENSRNOG00000008291	Thumpd2	63	40.556	ENSHBUG00000011780	-	58	46.186	Haplochromis_burtoni
ENSRNOG00000008291	Thumpd2	90	68.090	ENSHGLG00000019145	THUMPD2	99	65.408	Heterocephalus_glaber_female
ENSRNOG00000008291	Thumpd2	72	46.429	ENSIPUG00000015283	thumpd2	97	40.157	Ictalurus_punctatus
ENSRNOG00000008291	Thumpd2	90	69.173	ENSSTOG00000027472	THUMPD2	100	65.743	Ictidomys_tridecemlineatus
ENSRNOG00000008291	Thumpd2	85	63.270	ENSJJAG00000020374	Thumpd2	99	63.270	Jaculus_jaculus
ENSRNOG00000008291	Thumpd2	81	46.890	ENSLBEG00000007585	THUMPD2	89	36.111	Labrus_bergylta
ENSRNOG00000008291	Thumpd2	89	41.584	ENSLOCG00000015747	THUMPD2	97	42.079	Lepisosteus_oculatus
ENSRNOG00000008291	Thumpd2	66	63.300	ENSLAFG00000005383	-	97	63.300	Loxodonta_africana
ENSRNOG00000008291	Thumpd2	90	67.588	ENSMFAG00000031464	THUMPD2	100	65.873	Macaca_fascicularis
ENSRNOG00000008291	Thumpd2	90	67.839	ENSMMUG00000011841	THUMPD2	100	66.071	Macaca_mulatta
ENSRNOG00000008291	Thumpd2	90	67.588	ENSMNEG00000037438	THUMPD2	100	65.873	Macaca_nemestrina
ENSRNOG00000008291	Thumpd2	84	65.584	ENSMLEG00000031490	THUMPD2	100	65.584	Mandrillus_leucophaeus
ENSRNOG00000008291	Thumpd2	88	36.456	ENSMAMG00000022090	thumpd2	83	37.226	Mastacembelus_armatus
ENSRNOG00000008291	Thumpd2	80	45.200	ENSMZEG00005027354	-	73	40.710	Maylandia_zebra
ENSRNOG00000008291	Thumpd2	83	50.785	ENSMGAG00000007605	THUMPD2	99	47.648	Meleagris_gallopavo
ENSRNOG00000008291	Thumpd2	96	74.480	ENSMAUG00000012866	Thumpd2	99	74.480	Mesocricetus_auratus
ENSRNOG00000008291	Thumpd2	87	68.930	ENSMICG00000008042	THUMPD2	100	64.286	Microcebus_murinus
ENSRNOG00000008291	Thumpd2	96	74.858	ENSMOCG00000018094	Thumpd2	99	74.858	Microtus_ochrogaster
ENSRNOG00000008291	Thumpd2	66	42.029	ENSMMOG00000007356	thumpd2	89	42.029	Mola_mola
ENSRNOG00000008291	Thumpd2	80	58.192	ENSMODG00000009129	THUMPD2	100	53.879	Monodelphis_domestica
ENSRNOG00000008291	Thumpd2	89	32.997	ENSMALG00000020471	thumpd2	99	32.335	Monopterus_albus
ENSRNOG00000008291	Thumpd2	96	82.987	MGP_CAROLIEiJ_G0021912	Thumpd2	100	82.987	Mus_caroli
ENSRNOG00000008291	Thumpd2	96	82.231	ENSMUSG00000024246	Thumpd2	100	82.231	Mus_musculus
ENSRNOG00000008291	Thumpd2	96	83.554	MGP_PahariEiJ_G0020902	Thumpd2	100	83.554	Mus_pahari
ENSRNOG00000008291	Thumpd2	96	83.365	MGP_SPRETEiJ_G0022828	Thumpd2	100	83.365	Mus_spretus
ENSRNOG00000008291	Thumpd2	90	68.844	ENSMPUG00000010563	THUMPD2	99	65.278	Mustela_putorius_furo
ENSRNOG00000008291	Thumpd2	86	66.034	ENSMLUG00000009688	THUMPD2	100	66.034	Myotis_lucifugus
ENSRNOG00000008291	Thumpd2	90	72.152	ENSNGAG00000016396	Thumpd2	99	68.566	Nannospalax_galili
ENSRNOG00000008291	Thumpd2	90	67.085	ENSNLEG00000016562	THUMPD2	100	65.873	Nomascus_leucogenys
ENSRNOG00000008291	Thumpd2	86	50.955	ENSMEUG00000014815	THUMPD2	99	50.955	Notamacropus_eugenii
ENSRNOG00000008291	Thumpd2	83	54.348	ENSOPRG00000013478	THUMPD2	99	54.348	Ochotona_princeps
ENSRNOG00000008291	Thumpd2	89	38.424	ENSONIG00000001165	thumpd2	95	39.151	Oreochromis_niloticus
ENSRNOG00000008291	Thumpd2	84	54.178	ENSOANG00000004028	-	99	54.178	Ornithorhynchus_anatinus
ENSRNOG00000008291	Thumpd2	90	67.506	ENSOCUG00000003257	THUMPD2	100	67.588	Oryctolagus_cuniculus
ENSRNOG00000008291	Thumpd2	89	39.801	ENSORLG00000002138	thumpd2	99	37.376	Oryzias_latipes
ENSRNOG00000008291	Thumpd2	54	42.284	ENSORLG00020018792	thumpd2	72	42.284	Oryzias_latipes_hni
ENSRNOG00000008291	Thumpd2	86	38.501	ENSORLG00015005237	thumpd2	97	36.864	Oryzias_latipes_hsok
ENSRNOG00000008291	Thumpd2	88	32.930	ENSOMEG00000023563	thumpd2	99	31.600	Oryzias_melastigma
ENSRNOG00000008291	Thumpd2	80	65.449	ENSOGAG00000010890	THUMPD2	99	62.445	Otolemur_garnettii
ENSRNOG00000008291	Thumpd2	93	60.048	ENSOARG00000007841	THUMPD2	99	58.300	Ovis_aries
ENSRNOG00000008291	Thumpd2	89	66.667	ENSPPAG00000033850	THUMPD2	99	66.667	Pan_paniscus
ENSRNOG00000008291	Thumpd2	90	68.170	ENSPPRG00000003874	THUMPD2	100	65.149	Panthera_pardus
ENSRNOG00000008291	Thumpd2	84	63.715	ENSPTIG00000004118	THUMPD2	96	63.715	Panthera_tigris_altaica
ENSRNOG00000008291	Thumpd2	90	67.588	ENSPTRG00000011860	THUMPD2	100	66.468	Pan_troglodytes
ENSRNOG00000008291	Thumpd2	90	67.085	ENSPANG00000004807	THUMPD2	100	65.476	Papio_anubis
ENSRNOG00000008291	Thumpd2	87	37.113	ENSPKIG00000022207	THUMPD2	89	37.938	Paramormyrops_kingsleyae
ENSRNOG00000008291	Thumpd2	80	55.096	ENSPSIG00000003159	THUMPD2	99	51.055	Pelodiscus_sinensis
ENSRNOG00000008291	Thumpd2	96	75.895	ENSPEMG00000009015	Thumpd2	100	75.895	Peromyscus_maniculatus_bairdii
ENSRNOG00000008291	Thumpd2	83	38.992	ENSPMAG00000006922	thumpd2	99	39.589	Petromyzon_marinus
ENSRNOG00000008291	Thumpd2	89	54.962	ENSPCIG00000022621	THUMPD2	96	51.800	Phascolarctos_cinereus
ENSRNOG00000008291	Thumpd2	88	35.317	ENSPFOG00000006461	thumpd2	97	35.657	Poecilia_formosa
ENSRNOG00000008291	Thumpd2	88	33.400	ENSPLAG00000010700	THUMPD2	97	33.600	Poecilia_latipinna
ENSRNOG00000008291	Thumpd2	88	36.400	ENSPMEG00000009573	-	97	36.970	Poecilia_mexicana
ENSRNOG00000008291	Thumpd2	66	44.928	ENSPREG00000001603	THUMPD2	86	44.928	Poecilia_reticulata
ENSRNOG00000008291	Thumpd2	86	65.474	ENSPPYG00000012470	THUMPD2	100	65.474	Pongo_abelii
ENSRNOG00000008291	Thumpd2	84	52.597	ENSPCAG00000007326	THUMPD2	99	52.597	Procavia_capensis
ENSRNOG00000008291	Thumpd2	86	68.586	ENSPCOG00000000396	-	100	64.881	Propithecus_coquereli
ENSRNOG00000008291	Thumpd2	91	52.976	ENSPCOG00000028456	-	100	52.976	Propithecus_coquereli
ENSRNOG00000008291	Thumpd2	83	67.663	ENSPVAG00000008101	THUMPD2	100	63.924	Pteropus_vampyrus
ENSRNOG00000008291	Thumpd2	89	31.474	ENSPNYG00000009804	THUMPD2	97	32.271	Pundamilia_nyererei
ENSRNOG00000008291	Thumpd2	88	40.153	ENSPNAG00000023224	thumpd2	98	38.211	Pygocentrus_nattereri
ENSRNOG00000008291	Thumpd2	91	60.437	ENSRBIG00000034978	THUMPD2	100	60.437	Rhinopithecus_bieti
ENSRNOG00000008291	Thumpd2	86	66.034	ENSRROG00000031707	THUMPD2	100	66.034	Rhinopithecus_roxellana
ENSRNOG00000008291	Thumpd2	90	67.003	ENSSBOG00000015419	THUMPD2	100	65.010	Saimiri_boliviensis_boliviensis
ENSRNOG00000008291	Thumpd2	83	58.197	ENSSHAG00000010785	THUMPD2	99	53.602	Sarcophilus_harrisii
ENSRNOG00000008291	Thumpd2	61	55.224	ENSSFOG00015006959	THUMPD2	90	55.224	Scleropages_formosus
ENSRNOG00000008291	Thumpd2	66	49.239	ENSSDUG00000019898	THUMPD2	68	41.195	Seriola_dumerili
ENSRNOG00000008291	Thumpd2	66	48.731	ENSSLDG00000016788	-	68	40.584	Seriola_lalandi_dorsalis
ENSRNOG00000008291	Thumpd2	74	48.441	ENSSPUG00000006316	THUMPD2	97	48.441	Sphenodon_punctatus
ENSRNOG00000008291	Thumpd2	91	67.442	ENSSSCG00000008470	THUMPD2	99	63.221	Sus_scrofa
ENSRNOG00000008291	Thumpd2	83	51.337	ENSTGUG00000012782	THUMPD2	100	51.654	Taeniopygia_guttata
ENSRNOG00000008291	Thumpd2	87	36.008	ENSTRUG00000022712	THUMPD2	97	36.008	Takifugu_rubripes
ENSRNOG00000008291	Thumpd2	61	33.455	ENSTNIG00000009817	-	100	33.455	Tetraodon_nigroviridis
ENSRNOG00000008291	Thumpd2	83	69.022	ENSTTRG00000005603	THUMPD2	99	65.539	Tursiops_truncatus
ENSRNOG00000008291	Thumpd2	90	70.250	ENSUAMG00000011048	THUMPD2	97	65.743	Ursus_americanus
ENSRNOG00000008291	Thumpd2	89	59.959	ENSUMAG00000013316	THUMPD2	96	62.017	Ursus_maritimus
ENSRNOG00000008291	Thumpd2	69	86.486	ENSVPAG00000007570	THUMPD2	64	86.486	Vicugna_pacos
ENSRNOG00000008291	Thumpd2	83	68.120	ENSVVUG00000018628	THUMPD2	100	64.768	Vulpes_vulpes
ENSRNOG00000008291	Thumpd2	86	44.987	ENSXETG00000018494	thumpd2	98	42.683	Xenopus_tropicalis
ENSRNOG00000008291	Thumpd2	62	51.099	ENSXCOG00000013456	-	90	42.708	Xiphophorus_couchianus
ENSRNOG00000008291	Thumpd2	86	38.499	ENSXMAG00000017249	thumpd2	97	36.154	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0016423	tRNA (guanine) methyltransferase activity	21873635.	IBA	Function
GO:0030488	tRNA methylation	21873635.	IBA	Process