EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000008490 (Gene tree)
Gene ID
300361
Gene Symbol
Cwc15
Alias
LOC300361|MGC109502|RGD1310669
Full Name
CWC15 spliceosome-associated protein
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Plus strand
Length
10803 bases
Position
chr8:12994155-13004957
Accession
1310669
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000011856Cwf_Cwc_15PF04889.128.4e-7711
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000011855-1348XM_006242520ENSRNOP00000011856229 (aa)XP_006242582Q5BJP2
Gene Model
Click here to download ENSRNOG00000008490's gene model file
Pathways
Pathway IDPathway NameSource
rno03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000008490's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSRNOG00000008490Cwc1510094.760ENSRNOG00000025157AABR07008904.110094.760
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000008490Cwc1510099.563ENSG00000150316CWC1510099.563Homo_sapiens
ENSRNOG00000008490Cwc1510080.335ENSAPOG00000003107cwc159483.682Acanthochromis_polyacanthus
ENSRNOG00000008490Cwc1510098.268ENSAMEG00000011392CWC1510098.268Ailuropoda_melanoleuca
ENSRNOG00000008490Cwc1510081.092ENSACIG00000015258cwc1510083.613Amphilophus_citrinellus
ENSRNOG00000008490Cwc1510080.753ENSAOCG00000010738cwc1510084.100Amphiprion_ocellaris
ENSRNOG00000008490Cwc1510080.753ENSAPEG00000004563cwc1510084.100Amphiprion_percula
ENSRNOG00000008490Cwc1510081.590ENSATEG00000013290cwc1510084.100Anabas_testudineus
ENSRNOG00000008490Cwc1510092.174ENSAPLG00000003221CWC1510096.087Anas_platyrhynchos
ENSRNOG00000008490Cwc159190.952ENSACAG00000013987CWC159493.333Anolis_carolinensis
ENSRNOG00000008490Cwc1510099.563ENSANAG00000020484CWC1510099.563Aotus_nancymaae
ENSRNOG00000008490Cwc1510080.591ENSACLG00000012474cwc1510083.122Astatotilapia_calliptera
ENSRNOG00000008490Cwc1510078.099ENSAMXG00000007538cwc1510078.099Astyanax_mexicanus
ENSRNOG00000008490Cwc1510098.701ENSBTAG00000007913CWC1510098.701Bos_taurus
ENSRNOG00000008490Cwc1510061.538WBGene00011687cwc-1510061.538Caenorhabditis_elegans
ENSRNOG00000008490Cwc1510099.563ENSCJAG00000040352CWC1510099.563Callithrix_jacchus
ENSRNOG00000008490Cwc1510098.701ENSCAFG00000004134CWC1510098.701Canis_familiaris
ENSRNOG00000008490Cwc1510095.671ENSCAFG00000005959-10095.671Canis_familiaris
ENSRNOG00000008490Cwc1510099.130ENSCAFG00020016515CWC1510099.130Canis_lupus_dingo
ENSRNOG00000008490Cwc1510098.701ENSCHIG00000013423CWC1510098.701Capra_hircus
ENSRNOG00000008490Cwc1510099.563ENSTSYG00000010873-10099.563Carlito_syrichta
ENSRNOG00000008490Cwc1510098.261ENSTSYG00000000407-10098.261Carlito_syrichta
ENSRNOG00000008490Cwc1510064.629ENSCAPG00000017015CWC1510064.629Cavia_aperea
ENSRNOG00000008490Cwc1510099.563ENSCPOG00000006249CWC1510099.563Cavia_porcellus
ENSRNOG00000008490Cwc1510099.563ENSCCAG00000026289CWC1510099.563Cebus_capucinus
ENSRNOG00000008490Cwc1510099.563ENSCATG00000030235CWC1510099.563Cercocebus_atys
ENSRNOG00000008490Cwc1510099.127ENSCLAG00000000129CWC1510099.127Chinchilla_lanigera
ENSRNOG00000008490Cwc1510099.563ENSCSAG00000003299CWC1510099.563Chlorocebus_sabaeus
ENSRNOG00000008490Cwc1510090.870ENSCPBG00000024037CWC1510094.783Chrysemys_picta_bellii
ENSRNOG00000008490Cwc1510058.079ENSCING00000012768-10058.515Ciona_intestinalis
ENSRNOG00000008490Cwc1510058.952ENSCSAVG00000003476-10059.389Ciona_savignyi
ENSRNOG00000008490Cwc1510099.563ENSCANG00000028070CWC1510099.563Colobus_angolensis_palliatus
ENSRNOG00000008490Cwc15100100.000ENSCGRG00001013337Cwc15100100.000Cricetulus_griseus_chok1gshd
ENSRNOG00000008490Cwc15100100.000ENSCGRG00000015359Cwc15100100.000Cricetulus_griseus_crigri
ENSRNOG00000008490Cwc1510077.959ENSCSEG00000018582cwc159480.000Cynoglossus_semilaevis
ENSRNOG00000008490Cwc1510083.613ENSCVAG00000014417cwc1510083.613Cyprinodon_variegatus
ENSRNOG00000008490Cwc1510078.455ENSDARG00000013382cwc1510078.455Danio_rerio
ENSRNOG00000008490Cwc158672.637ENSDNOG00000046295-10073.134Dasypus_novemcinctus
ENSRNOG00000008490Cwc1510098.701ENSDNOG00000041326CWC1510098.701Dasypus_novemcinctus
ENSRNOG00000008490Cwc1510098.253ENSDORG00000011075Cwc1510098.253Dipodomys_ordii
ENSRNOG00000008490Cwc1510049.259FBgn0040235c12.110049.084Drosophila_melanogaster
ENSRNOG00000008490Cwc156486.301ENSETEG00000010889-9981.507Echinops_telfairi
ENSRNOG00000008490Cwc156497.987ENSETEG00000006649-10097.987Echinops_telfairi
ENSRNOG00000008490Cwc1510068.559ENSEBUG00000013107cwc1510065.939Eptatretus_burgeri
ENSRNOG00000008490Cwc1510098.268ENSEASG00005011279CWC1510098.268Equus_asinus_asinus
ENSRNOG00000008490Cwc1510098.268ENSECAG00000013314CWC1510098.268Equus_caballus
ENSRNOG00000008490Cwc1510097.403ENSEEUG00000002124CWC1510097.403Erinaceus_europaeus
ENSRNOG00000008490Cwc1510078.189ENSELUG00000008086cwc1510080.992Esox_lucius
ENSRNOG00000008490Cwc1510099.127ENSFCAG00000007826-10099.127Felis_catus
ENSRNOG00000008490Cwc1510092.174ENSFALG00000000326CWC1510096.087Ficedula_albicollis
ENSRNOG00000008490Cwc1510099.127ENSFDAG00000014629CWC1510099.127Fukomys_damarensis
ENSRNOG00000008490Cwc1510082.008ENSFHEG00000002105cwc1510082.008Fundulus_heteroclitus
ENSRNOG00000008490Cwc1510064.255ENSGMOG00000016146cwc1510066.809Gadus_morhua
ENSRNOG00000008490Cwc1510092.174ENSGALG00000017207CWC1510095.652Gallus_gallus
ENSRNOG00000008490Cwc1510079.412ENSGAFG00000005721cwc1510081.933Gambusia_affinis
ENSRNOG00000008490Cwc1510081.013ENSGACG00000020374cwc1510081.013Gasterosteus_aculeatus
ENSRNOG00000008490Cwc1510090.435ENSGAGG00000024008CWC159994.348Gopherus_agassizii
ENSRNOG00000008490Cwc1510099.563ENSGGOG00000011926CWC1510099.563Gorilla_gorilla
ENSRNOG00000008490Cwc1510080.932ENSHBUG00000003341cwc1510083.475Haplochromis_burtoni
ENSRNOG00000008490Cwc1510099.563ENSHGLG00000006521CWC1510099.563Heterocephalus_glaber_female
ENSRNOG00000008490Cwc159983.333ENSHGLG00000003773-10080.263Heterocephalus_glaber_female
ENSRNOG00000008490Cwc1510079.476ENSHGLG00100003268-10077.729Heterocephalus_glaber_male
ENSRNOG00000008490Cwc1510095.633ENSHGLG00100007904-10095.633Heterocephalus_glaber_male
ENSRNOG00000008490Cwc1510078.776ENSHCOG00000006089cwc1510078.367Hippocampus_comes
ENSRNOG00000008490Cwc1510099.563ENSSTOG00000002485CWC1510099.563Ictidomys_tridecemlineatus
ENSRNOG00000008490Cwc1510096.507ENSJJAG00000012940-10096.507Jaculus_jaculus
ENSRNOG00000008490Cwc1510096.943ENSJJAG00000012773-10096.943Jaculus_jaculus
ENSRNOG00000008490Cwc159582.949ENSJJAG00000016968-10081.567Jaculus_jaculus
ENSRNOG00000008490Cwc1510083.051ENSKMAG00000011877cwc1510083.051Kryptolebias_marmoratus
ENSRNOG00000008490Cwc1510079.012ENSLBEG00000026116cwc1510081.893Labrus_bergylta
ENSRNOG00000008490Cwc1510084.979ENSLACG00000012239CWC1510087.554Latimeria_chalumnae
ENSRNOG00000008490Cwc1510085.043ENSLOCG00000007570cwc1510085.043Lepisosteus_oculatus
ENSRNOG00000008490Cwc1510098.701ENSLAFG00000004456CWC1510098.701Loxodonta_africana
ENSRNOG00000008490Cwc1510099.563ENSMFAG00000044052CWC1510099.563Macaca_fascicularis
ENSRNOG00000008490Cwc1510099.563ENSMMUG00000044962CWC1510099.563Macaca_mulatta
ENSRNOG00000008490Cwc1510099.563ENSMNEG00000033968CWC1510099.563Macaca_nemestrina
ENSRNOG00000008490Cwc1510099.563ENSMLEG00000035668CWC1510099.563Mandrillus_leucophaeus
ENSRNOG00000008490Cwc1510083.122ENSMAMG00000013540cwc1510083.544Mastacembelus_armatus
ENSRNOG00000008490Cwc1510080.591ENSMZEG00005015901cwc1510083.122Maylandia_zebra
ENSRNOG00000008490Cwc1510092.174ENSMGAG00000015193CWC1510095.652Meleagris_gallopavo
ENSRNOG00000008490Cwc1510099.127ENSMAUG00000011686Cwc1510099.127Mesocricetus_auratus
ENSRNOG00000008490Cwc1510099.563ENSMICG00000042790CWC1510099.563Microcebus_murinus
ENSRNOG00000008490Cwc1510099.563ENSMOCG00000016094Cwc1510099.563Microtus_ochrogaster
ENSRNOG00000008490Cwc1510081.545ENSMMOG00000016343cwc1510080.258Mola_mola
ENSRNOG00000008490Cwc159996.943ENSMODG00000000169-9696.943Monodelphis_domestica
ENSRNOG00000008490Cwc1510069.432ENSMODG00000003709-10069.432Monodelphis_domestica
ENSRNOG00000008490Cwc1510077.637ENSMALG00000019325cwc1510075.949Monopterus_albus
ENSRNOG00000008490Cwc1510099.563MGP_CAROLIEiJ_G0031782Cwc1510099.563Mus_caroli
ENSRNOG00000008490Cwc1510099.563ENSMUSG00000004096Cwc1510099.563Mus_musculus
ENSRNOG00000008490Cwc1510099.563MGP_PahariEiJ_G0014658Cwc1510099.563Mus_pahari
ENSRNOG00000008490Cwc1510099.127MGP_SPRETEiJ_G0032902Cwc1510099.127Mus_spretus
ENSRNOG00000008490Cwc1510098.701ENSMPUG00000012265CWC1510098.701Mustela_putorius_furo
ENSRNOG00000008490Cwc1510096.104ENSMLUG00000026676-10096.104Myotis_lucifugus
ENSRNOG00000008490Cwc1510098.268ENSMLUG00000002032-10098.268Myotis_lucifugus
ENSRNOG00000008490Cwc1510099.563ENSNGAG00000016450Cwc1510099.563Nannospalax_galili
ENSRNOG00000008490Cwc1510080.591ENSNBRG00000018245cwc1510083.122Neolamprologus_brichardi
ENSRNOG00000008490Cwc1510099.563ENSNLEG00000031455CWC1510099.563Nomascus_leucogenys
ENSRNOG00000008490Cwc1510098.253ENSOPRG00000001706-10098.253Ochotona_princeps
ENSRNOG00000008490Cwc1510099.563ENSODEG00000014060-10099.563Octodon_degus
ENSRNOG00000008490Cwc1510074.783ENSODEG00000009713-10074.236Octodon_degus
ENSRNOG00000008490Cwc1510082.969ENSODEG00000008155-10082.969Octodon_degus
ENSRNOG00000008490Cwc1510098.253ENSODEG00000020310-10098.253Octodon_degus
ENSRNOG00000008490Cwc1510088.646ENSODEG00000002251-10088.646Octodon_degus
ENSRNOG00000008490Cwc1510080.591ENSONIG00000004326cwc1510083.122Oreochromis_niloticus
ENSRNOG00000008490Cwc1510092.208ENSOANG00000010404-10094.805Ornithorhynchus_anatinus
ENSRNOG00000008490Cwc1510077.729ENSOANG00000001673-10077.293Ornithorhynchus_anatinus
ENSRNOG00000008490Cwc1510099.563ENSOCUG00000001629CWC1510099.563Oryctolagus_cuniculus
ENSRNOG00000008490Cwc1510077.551ENSORLG00000008550cwc158580.000Oryzias_latipes
ENSRNOG00000008490Cwc1510077.869ENSORLG00020002475cwc158580.328Oryzias_latipes_hni
ENSRNOG00000008490Cwc1510078.189ENSORLG00015007291cwc158580.658Oryzias_latipes_hsok
ENSRNOG00000008490Cwc1510077.778ENSOMEG00000000650cwc1510080.658Oryzias_melastigma
ENSRNOG00000008490Cwc1510099.563ENSOGAG00000001686CWC1510099.563Otolemur_garnettii
ENSRNOG00000008490Cwc1510098.701ENSOARG00000009316-10098.701Ovis_aries
ENSRNOG00000008490Cwc159169.231ENSOARG00000016298-10071.770Ovis_aries
ENSRNOG00000008490Cwc1510099.563ENSPPAG00000033609CWC1510099.563Pan_paniscus
ENSRNOG00000008490Cwc1510092.641ENSPPRG00000015290-10094.805Panthera_pardus
ENSRNOG00000008490Cwc1510099.127ENSPPRG00000005063-10099.127Panthera_pardus
ENSRNOG00000008490Cwc156495.349ENSPTIG00000006844-8895.349Panthera_tigris_altaica
ENSRNOG00000008490Cwc1510072.489ENSPTIG00000021149-10070.306Panthera_tigris_altaica
ENSRNOG00000008490Cwc1510099.563ENSPTRG00000044239CWC1510099.563Pan_troglodytes
ENSRNOG00000008490Cwc1510099.563ENSPANG00000019125CWC1510099.563Papio_anubis
ENSRNOG00000008490Cwc1510081.197ENSPKIG00000020021cwc1510084.188Paramormyrops_kingsleyae
ENSRNOG00000008490Cwc1510090.435ENSPSIG00000011569CWC1510094.348Pelodiscus_sinensis
ENSRNOG00000008490Cwc1510067.241ENSPMGG00000002740cwc1510068.103Periophthalmus_magnuspinnatus
ENSRNOG00000008490Cwc15100100.000ENSPEMG00000021432Cwc15100100.000Peromyscus_maniculatus_bairdii
ENSRNOG00000008490Cwc156472.667ENSPMAG00000007890cwc159972.000Petromyzon_marinus
ENSRNOG00000008490Cwc1510096.970ENSPCIG00000001348CWC1510096.970Phascolarctos_cinereus
ENSRNOG00000008490Cwc1510079.412ENSPFOG00000002621cwc1510081.933Poecilia_formosa
ENSRNOG00000008490Cwc1510079.412ENSPLAG00000022639cwc1510081.933Poecilia_latipinna
ENSRNOG00000008490Cwc1510079.412ENSPMEG00000001332cwc1510081.933Poecilia_mexicana
ENSRNOG00000008490Cwc1510078.992ENSPREG00000021919cwc1510081.513Poecilia_reticulata
ENSRNOG00000008490Cwc1510099.563ENSPPYG00000003785CWC1510099.563Pongo_abelii
ENSRNOG00000008490Cwc1510081.818ENSPCAG00000004205CWC1510081.818Procavia_capensis
ENSRNOG00000008490Cwc1510099.563ENSPCOG00000023913CWC1510099.563Propithecus_coquereli
ENSRNOG00000008490Cwc1510098.701ENSPVAG00000017517CWC1510098.701Pteropus_vampyrus
ENSRNOG00000008490Cwc1510080.591ENSPNYG00000019347cwc1510083.122Pundamilia_nyererei
ENSRNOG00000008490Cwc155973.944ENSPNAG00000022563cwc157978.261Pygocentrus_nattereri
ENSRNOG00000008490Cwc1510099.563ENSRBIG00000030781CWC1510099.563Rhinopithecus_bieti
ENSRNOG00000008490Cwc1510099.563ENSRROG00000037199CWC1510099.563Rhinopithecus_roxellana
ENSRNOG00000008490Cwc1510080.519ENSSBOG00000035727-10077.056Saimiri_boliviensis_boliviensis
ENSRNOG00000008490Cwc159975.877ENSSBOG00000033926-9971.491Saimiri_boliviensis_boliviensis
ENSRNOG00000008490Cwc1510099.563ENSSBOG00000006158-10099.563Saimiri_boliviensis_boliviensis
ENSRNOG00000008490Cwc1510097.403ENSSHAG00000016534-10097.403Sarcophilus_harrisii
ENSRNOG00000008490Cwc1510089.520ENSSHAG00000000335-10088.646Sarcophilus_harrisii
ENSRNOG00000008490Cwc1510082.906ENSSFOG00015011833cwc1510085.897Scleropages_formosus
ENSRNOG00000008490Cwc1510079.079ENSSMAG00000016275cwc1510082.427Scophthalmus_maximus
ENSRNOG00000008490Cwc1510077.419ENSSDUG00000012642cwc1510079.839Seriola_dumerili
ENSRNOG00000008490Cwc1510077.108ENSSLDG00000016292cwc1510079.518Seriola_lalandi_dorsalis
ENSRNOG00000008490Cwc159950.442ENSSARG00000004113-9947.788Sorex_araneus
ENSRNOG00000008490Cwc159276.415ENSSPUG00000004441CWC159976.415Sphenodon_punctatus
ENSRNOG00000008490Cwc1510081.172ENSSPAG00000004630cwc1510083.682Stegastes_partitus
ENSRNOG00000008490Cwc1510098.268ENSSSCG00000014961CWC1510098.268Sus_scrofa
ENSRNOG00000008490Cwc1510092.609ENSTGUG00000012817CWC1510096.087Taeniopygia_guttata
ENSRNOG00000008490Cwc1510076.763ENSTRUG00000015508cwc1510077.593Takifugu_rubripes
ENSRNOG00000008490Cwc1510078.903ENSTNIG00000011790cwc1510079.325Tetraodon_nigroviridis
ENSRNOG00000008490Cwc1510065.502ENSTBEG00000014319CWC1510065.502Tupaia_belangeri
ENSRNOG00000008490Cwc1510083.843ENSTTRG00000004922CWC1510083.843Tursiops_truncatus
ENSRNOG00000008490Cwc1510099.130ENSUAMG00000026040CWC1510099.130Ursus_americanus
ENSRNOG00000008490Cwc1510098.701ENSUMAG00000007161CWC1510098.701Ursus_maritimus
ENSRNOG00000008490Cwc1510098.268ENSVPAG00000005841CWC1510098.268Vicugna_pacos
ENSRNOG00000008490Cwc1510096.522ENSVVUG00000011648-10096.522Vulpes_vulpes
ENSRNOG00000008490Cwc1510095.238ENSVVUG00000012624-10095.238Vulpes_vulpes
ENSRNOG00000008490Cwc1510089.520ENSXETG00000007076cwc1510089.520Xenopus_tropicalis
ENSRNOG00000008490Cwc1510078.571ENSXCOG00000006310cwc1510081.933Xiphophorus_couchianus
ENSRNOG00000008490Cwc1510079.412ENSXMAG00000011472cwc1510081.933Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000398mRNA splicing, via spliceosome-ISOProcess
GO:0000398mRNA splicing, via spliceosome-ISSProcess
GO:0003674molecular_function-NDFunction
GO:0003723RNA binding21873635.IBAFunction
GO:0003723RNA binding-ISSFunction
GO:0005575cellular_component-NDComponent
GO:0005634nucleus-ISOComponent
GO:0005634nucleus-ISSComponent
GO:0005681spliceosomal complex-ISOComponent
GO:0005681spliceosomal complex-ISSComponent
GO:0005739mitochondrion-ISOComponent
GO:0008150biological_process-NDProcess
GO:0016607nuclear speck-ISOComponent
GO:0045292mRNA cis splicing, via spliceosome21873635.IBAProcess
GO:0071007U2-type catalytic step 2 spliceosome-ISOComponent
GO:0071007U2-type catalytic step 2 spliceosome-ISSComponent
GO:0071013catalytic step 2 spliceosome21873635.IBAComponent
GO:0071013catalytic step 2 spliceosome-ISOComponent

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