EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000008584 (Gene tree)
Gene ID
298933
Gene Symbol
Rnaseh1
Alias
LOC298933|MGC108918
Full Name
ribonuclease H1
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Plus strand
Length
9384 bases
Position
chr6:47916188-47925571
Accession
1309012
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000011819RNase_HPF00075.241.7e-4511
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000011819-1374-ENSRNOP00000011819285 (aa)-Q5BK46
Gene Model
Click here to download ENSRNOG00000008584's gene model file
Pathways
Pathway IDPathway NameSource
rno03030DNA replicationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000008584's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000008584Rnaseh19977.544ENSG00000171865RNASEH19976.140Homo_sapiens
ENSRNOG00000008584Rnaseh19654.296ENSAPOG00000000412rnaseh19651.724Acanthochromis_polyacanthus
ENSRNOG00000008584Rnaseh19380.377ENSAMEG00000018433RNASEH19977.193Ailuropoda_melanoleuca
ENSRNOG00000008584Rnaseh19753.333ENSACIG00000014666rnaseh19452.669Amphilophus_citrinellus
ENSRNOG00000008584Rnaseh19655.670ENSAOCG00000015210rnaseh19652.759Amphiprion_ocellaris
ENSRNOG00000008584Rnaseh19656.014ENSAPEG00000014104rnaseh19653.103Amphiprion_percula
ENSRNOG00000008584Rnaseh19654.983ENSATEG00000000598rnaseh19355.303Anabas_testudineus
ENSRNOG00000008584Rnaseh18661.154ENSAPLG00000001961RNASEH110059.302Anas_platyrhynchos
ENSRNOG00000008584Rnaseh19153.846ENSACAG00000016857rnaseh19251.178Anolis_carolinensis
ENSRNOG00000008584Rnaseh19979.298ENSANAG00000024055RNASEH19977.895Aotus_nancymaae
ENSRNOG00000008584Rnaseh19752.577ENSACLG00000006741rnaseh19450.515Astatotilapia_calliptera
ENSRNOG00000008584Rnaseh19847.387ENSAMXG00000042940rnaseh19947.552Astyanax_mexicanus
ENSRNOG00000008584Rnaseh19976.596ENSBTAG00000016235RNASEH19976.241Bos_taurus
ENSRNOG00000008584Rnaseh18941.176WBGene00004382rnh-1.09540.856Caenorhabditis_elegans
ENSRNOG00000008584Rnaseh19977.855ENSCJAG00000035450RNASEH19976.471Callithrix_jacchus
ENSRNOG00000008584Rnaseh19977.544ENSCAFG00000003259RNASEH19976.842Canis_familiaris
ENSRNOG00000008584Rnaseh15489.542ENSCAFG00020004994RNASEH19989.542Canis_lupus_dingo
ENSRNOG00000008584Rnaseh19975.265ENSCHIG00000022264-9974.912Capra_hircus
ENSRNOG00000008584Rnaseh18265.957ENSCHIG00000022230-9965.532Capra_hircus
ENSRNOG00000008584Rnaseh19979.649ENSTSYG00000012926RNASEH19979.298Carlito_syrichta
ENSRNOG00000008584Rnaseh18580.165ENSCAPG00000004813RNASEH19980.165Cavia_aperea
ENSRNOG00000008584Rnaseh19978.596ENSCPOG00000022278Rnaseh19678.596Cavia_porcellus
ENSRNOG00000008584Rnaseh19977.778ENSCCAG00000038017RNASEH19977.083Cebus_capucinus
ENSRNOG00000008584Rnaseh19969.123ENSCATG00000016818-9968.070Cercocebus_atys
ENSRNOG00000008584Rnaseh19976.842ENSCATG00000016515-9975.789Cercocebus_atys
ENSRNOG00000008584Rnaseh19979.649ENSCLAG00000002440RNASEH19978.947Chinchilla_lanigera
ENSRNOG00000008584Rnaseh19976.491ENSCSAG00000006943RNASEH19975.088Chlorocebus_sabaeus
ENSRNOG00000008584Rnaseh17178.713ENSCHOG00000008547RNASEH19978.713Choloepus_hoffmanni
ENSRNOG00000008584Rnaseh19064.103ENSCPBG00000021620RNASEH19863.910Chrysemys_picta_bellii
ENSRNOG00000008584Rnaseh18940.672ENSCING00000014054-9141.418Ciona_intestinalis
ENSRNOG00000008584Rnaseh17838.961ENSCSAVG00000000009-9938.627Ciona_savignyi
ENSRNOG00000008584Rnaseh19976.842ENSCANG00000037763RNASEH19975.439Colobus_angolensis_palliatus
ENSRNOG00000008584Rnaseh19990.813ENSCGRG00001008950Rnaseh19990.813Cricetulus_griseus_chok1gshd
ENSRNOG00000008584Rnaseh19990.813ENSCGRG00000006029Rnaseh19990.813Cricetulus_griseus_crigri
ENSRNOG00000008584Rnaseh18952.734ENSCSEG00000005741rnaseh19349.254Cynoglossus_semilaevis
ENSRNOG00000008584Rnaseh18956.654ENSCVAG00000018717rnaseh18755.056Cyprinodon_variegatus
ENSRNOG00000008584Rnaseh18954.511ENSDARG00000042571rnaseh19653.585Danio_rerio
ENSRNOG00000008584Rnaseh19977.003ENSDNOG00000016056RNASEH19975.958Dasypus_novemcinctus
ENSRNOG00000008584Rnaseh19978.014ENSDORG00000000704Rnaseh19977.305Dipodomys_ordii
ENSRNOG00000008584Rnaseh19139.057FBgn0023171rnh19538.384Drosophila_melanogaster
ENSRNOG00000008584Rnaseh19972.378ENSETEG00000012674RNASEH19971.678Echinops_telfairi
ENSRNOG00000008584Rnaseh19146.241ENSEBUG00000006116rnaseh17846.512Eptatretus_burgeri
ENSRNOG00000008584Rnaseh18946.367ENSEBUG00000008898rnaseh19746.367Eptatretus_burgeri
ENSRNOG00000008584Rnaseh19980.769ENSEASG00005022200RNASEH19879.371Equus_asinus_asinus
ENSRNOG00000008584Rnaseh19980.769ENSECAG00000020695RNASEH19879.371Equus_caballus
ENSRNOG00000008584Rnaseh19651.701ENSELUG00000010112rnaseh19851.701Esox_lucius
ENSRNOG00000008584Rnaseh19978.596ENSFCAG00000025832RNASEH19977.895Felis_catus
ENSRNOG00000008584Rnaseh19060.573ENSFALG00000002069RNASEH19260.573Ficedula_albicollis
ENSRNOG00000008584Rnaseh19976.842ENSFDAG00000002035RNASEH18876.140Fukomys_damarensis
ENSRNOG00000008584Rnaseh19750.676ENSGMOG00000013818rnaseh19851.228Gadus_morhua
ENSRNOG00000008584Rnaseh19959.333ENSGALG00000016389RNASEH19959.333Gallus_gallus
ENSRNOG00000008584Rnaseh19057.358ENSGAFG00000001776rnaseh18956.654Gambusia_affinis
ENSRNOG00000008584Rnaseh19853.061ENSGACG00000011935rnaseh19852.721Gasterosteus_aculeatus
ENSRNOG00000008584Rnaseh19062.271ENSGAGG00000009150RNASEH16261.481Gopherus_agassizii
ENSRNOG00000008584Rnaseh19977.193ENSGGOG00000034822RNASEH19975.789Gorilla_gorilla
ENSRNOG00000008584Rnaseh19752.577ENSHBUG00000004666rnaseh19550.000Haplochromis_burtoni
ENSRNOG00000008584Rnaseh19976.491ENSHGLG00000002585Rnaseh19275.439Heterocephalus_glaber_female
ENSRNOG00000008584Rnaseh19976.491ENSHGLG00100005105Rnaseh19275.439Heterocephalus_glaber_male
ENSRNOG00000008584Rnaseh19953.094ENSHCOG00000012329rnaseh19951.603Hippocampus_comes
ENSRNOG00000008584Rnaseh19457.143ENSIPUG00000023060rnaseh19758.301Ictalurus_punctatus
ENSRNOG00000008584Rnaseh19880.714ENSSTOG00000012774RNASEH19979.643Ictidomys_tridecemlineatus
ENSRNOG00000008584Rnaseh19970.423ENSJJAG00000008994-9970.423Jaculus_jaculus
ENSRNOG00000008584Rnaseh19978.521ENSJJAG00000021481-9978.521Jaculus_jaculus
ENSRNOG00000008584Rnaseh19083.268ENSJJAG00000020238Rnaseh110083.268Jaculus_jaculus
ENSRNOG00000008584Rnaseh19952.595ENSKMAG00000001373rnaseh19651.916Kryptolebias_marmoratus
ENSRNOG00000008584Rnaseh19751.370ENSLBEG00000004480rnaseh19851.579Labrus_bergylta
ENSRNOG00000008584Rnaseh19255.556ENSLACG00000007100RNASEH19055.124Latimeria_chalumnae
ENSRNOG00000008584Rnaseh18956.506ENSLOCG00000017212rnaseh19657.993Lepisosteus_oculatus
ENSRNOG00000008584Rnaseh110079.094ENSLAFG00000015091RNASEH110078.397Loxodonta_africana
ENSRNOG00000008584Rnaseh19970.070ENSMFAG00000002323-9968.662Macaca_fascicularis
ENSRNOG00000008584Rnaseh19977.544ENSMFAG00000000063-9976.140Macaca_fascicularis
ENSRNOG00000008584Rnaseh19970.070ENSMMUG00000019280-9969.014Macaca_mulatta
ENSRNOG00000008584Rnaseh19977.193ENSMNEG00000040183-9975.789Macaca_nemestrina
ENSRNOG00000008584Rnaseh19969.718ENSMNEG00000029676-9968.662Macaca_nemestrina
ENSRNOG00000008584Rnaseh19972.535ENSMLEG00000028662-9971.479Mandrillus_leucophaeus
ENSRNOG00000008584Rnaseh18579.752ENSMLEG00000039352-9978.099Mandrillus_leucophaeus
ENSRNOG00000008584Rnaseh19356.140ENSMAMG00000019725rnaseh19456.929Mastacembelus_armatus
ENSRNOG00000008584Rnaseh19752.577ENSMZEG00005013006rnaseh19450.515Maylandia_zebra
ENSRNOG00000008584Rnaseh18059.756ENSMGAG00000013979RNASEH19959.756Meleagris_gallopavo
ENSRNOG00000008584Rnaseh19988.380ENSMAUG00000014957Rnaseh19988.380Mesocricetus_auratus
ENSRNOG00000008584Rnaseh19982.206ENSMICG00000033156RNASEH19881.495Microcebus_murinus
ENSRNOG00000008584Rnaseh19987.456ENSMOCG00000015522Rnaseh19987.456Microtus_ochrogaster
ENSRNOG00000008584Rnaseh19351.943ENSMMOG00000015902rnaseh19450.704Mola_mola
ENSRNOG00000008584Rnaseh18060.684ENSMODG00000028814-9260.965Monodelphis_domestica
ENSRNOG00000008584Rnaseh19570.609ENSMODG00000014491-9770.609Monodelphis_domestica
ENSRNOG00000008584Rnaseh19754.007ENSMALG00000010565rnaseh19552.098Monopterus_albus
ENSRNOG00000008584Rnaseh19995.775MGP_CAROLIEiJ_G0017660Rnaseh19995.775Mus_caroli
ENSRNOG00000008584Rnaseh19995.775ENSMUSG00000020630Rnaseh19995.775Mus_musculus
ENSRNOG00000008584Rnaseh110096.491MGP_PahariEiJ_G0029418Rnaseh110096.491Mus_pahari
ENSRNOG00000008584Rnaseh19995.423MGP_SPRETEiJ_G0018502Rnaseh19995.423Mus_spretus
ENSRNOG00000008584Rnaseh17179.803ENSMPUG00000012984RNASEH19878.818Mustela_putorius_furo
ENSRNOG00000008584Rnaseh19886.121ENSNGAG00000015966Rnaseh19285.409Nannospalax_galili
ENSRNOG00000008584Rnaseh19752.921ENSNBRG00000008739rnaseh19450.859Neolamprologus_brichardi
ENSRNOG00000008584Rnaseh18770.281ENSNLEG00000000059-9369.758Nomascus_leucogenys
ENSRNOG00000008584Rnaseh19965.854ENSNLEG00000015400RNASEH19964.808Nomascus_leucogenys
ENSRNOG00000008584Rnaseh19349.071ENSMEUG00000003610-9449.071Notamacropus_eugenii
ENSRNOG00000008584Rnaseh19973.776ENSOPRG00000005072RNASEH19973.776Ochotona_princeps
ENSRNOG00000008584Rnaseh19978.947ENSODEG00000000235Rnaseh19678.246Octodon_degus
ENSRNOG00000008584Rnaseh18955.970ENSONIG00000018697rnaseh19653.903Oreochromis_niloticus
ENSRNOG00000008584Rnaseh19980.000ENSOCUG00000006117RNASEH19979.649Oryctolagus_cuniculus
ENSRNOG00000008584Rnaseh18956.923ENSORLG00000018127rnaseh19456.554Oryzias_latipes
ENSRNOG00000008584Rnaseh19853.716ENSORLG00020013660rnaseh19953.465Oryzias_latipes_hni
ENSRNOG00000008584Rnaseh19853.846ENSORLG00015011338rnaseh19953.465Oryzias_latipes_hsok
ENSRNOG00000008584Rnaseh18952.632ENSOMEG00000004710rnaseh19851.894Oryzias_melastigma
ENSRNOG00000008584Rnaseh19882.979ENSOGAG00000017176RNASEH19882.979Otolemur_garnettii
ENSRNOG00000008584Rnaseh19964.583ENSOARG00000005386RNASEH19964.236Ovis_aries
ENSRNOG00000008584Rnaseh19977.544ENSPPAG00000034221RNASEH19976.140Pan_paniscus
ENSRNOG00000008584Rnaseh19978.596ENSPPRG00000015513RNASEH19977.895Panthera_pardus
ENSRNOG00000008584Rnaseh18581.743ENSPTIG00000019034RNASEH18580.913Panthera_tigris_altaica
ENSRNOG00000008584Rnaseh19977.544ENSPTRG00000011614RNASEH19976.140Pan_troglodytes
ENSRNOG00000008584Rnaseh18869.112ENSPTRG00000043403-9767.969Pan_troglodytes
ENSRNOG00000008584Rnaseh19967.254ENSPANG00000018246-9966.901Papio_anubis
ENSRNOG00000008584Rnaseh19977.193ENSPANG00000000443RNASEH19977.551Papio_anubis
ENSRNOG00000008584Rnaseh18950.373ENSPKIG00000003146rnaseh19750.570Paramormyrops_kingsleyae
ENSRNOG00000008584Rnaseh18963.060ENSPSIG00000002937RNASEH19862.547Pelodiscus_sinensis
ENSRNOG00000008584Rnaseh18955.906ENSPMGG00000017463rnaseh19053.937Periophthalmus_magnuspinnatus
ENSRNOG00000008584Rnaseh19989.510ENSPEMG00000022465-9989.161Peromyscus_maniculatus_bairdii
ENSRNOG00000008584Rnaseh19568.571ENSPCIG00000023334-9768.571Phascolarctos_cinereus
ENSRNOG00000008584Rnaseh19056.667ENSPFOG00000002841rnaseh18958.175Poecilia_formosa
ENSRNOG00000008584Rnaseh17049.020ENSPLAG00000021349-8046.117Poecilia_latipinna
ENSRNOG00000008584Rnaseh19057.736ENSPMEG00000016826rnaseh18957.795Poecilia_mexicana
ENSRNOG00000008584Rnaseh19054.839ENSPREG00000012197rnaseh19054.613Poecilia_reticulata
ENSRNOG00000008584Rnaseh19967.368ENSPPYG00000025873RNASEH19965.965Pongo_abelii
ENSRNOG00000008584Rnaseh19172.031ENSPPYG00000008067-10070.881Pongo_abelii
ENSRNOG00000008584Rnaseh110073.519ENSPCAG00000002500RNASEH110072.474Procavia_capensis
ENSRNOG00000008584Rnaseh19974.377ENSPCOG00000019444RNASEH19873.665Propithecus_coquereli
ENSRNOG00000008584Rnaseh19974.296ENSPVAG00000002070RNASEH19974.296Pteropus_vampyrus
ENSRNOG00000008584Rnaseh19752.234ENSPNYG00000001292rnaseh19450.172Pundamilia_nyererei
ENSRNOG00000008584Rnaseh19854.082ENSPNAG00000022344rnaseh19953.287Pygocentrus_nattereri
ENSRNOG00000008584Rnaseh19976.842ENSRBIG00000034222RNASEH19975.439Rhinopithecus_bieti
ENSRNOG00000008584Rnaseh19977.193ENSRROG00000041761RNASEH19975.789Rhinopithecus_roxellana
ENSRNOG00000008584Rnaseh18939.759YMR234W-8250.000Saccharomyces_cerevisiae
ENSRNOG00000008584Rnaseh19977.431ENSSBOG00000025411RNASEH19976.736Saimiri_boliviensis_boliviensis
ENSRNOG00000008584Rnaseh19966.899ENSSHAG00000013051RNASEH19866.899Sarcophilus_harrisii
ENSRNOG00000008584Rnaseh19848.197ENSSFOG00015002709rnaseh19948.525Scleropages_formosus
ENSRNOG00000008584Rnaseh19253.357ENSSMAG00000007586rnaseh19253.710Scophthalmus_maximus
ENSRNOG00000008584Rnaseh19254.064ENSSDUG00000008217rnaseh19355.263Seriola_dumerili
ENSRNOG00000008584Rnaseh19152.500ENSSLDG00000000442rnaseh19355.061Seriola_lalandi_dorsalis
ENSRNOG00000008584Rnaseh19160.073ENSSPUG00000006644RNASEH19359.480Sphenodon_punctatus
ENSRNOG00000008584Rnaseh19653.584ENSSPAG00000009353rnaseh19652.560Stegastes_partitus
ENSRNOG00000008584Rnaseh19277.273ENSSSCG00000025305RNASEH19974.296Sus_scrofa
ENSRNOG00000008584Rnaseh19954.125ENSTGUG00000012980RNASEH19954.455Taeniopygia_guttata
ENSRNOG00000008584Rnaseh19951.525ENSTRUG00000015774rnaseh19653.114Takifugu_rubripes
ENSRNOG00000008584Rnaseh19155.597ENSTNIG00000010715rnaseh19654.647Tetraodon_nigroviridis
ENSRNOG00000008584Rnaseh19973.776ENSTTRG00000001615RNASEH19972.727Tursiops_truncatus
ENSRNOG00000008584Rnaseh15489.542ENSUAMG00000018254RNASEH17989.542Ursus_americanus
ENSRNOG00000008584Rnaseh16979.592ENSUMAG00000003941RNASEH16578.571Ursus_maritimus
ENSRNOG00000008584Rnaseh19965.493ENSVPAG00000011589RNASEH19964.437Vicugna_pacos
ENSRNOG00000008584Rnaseh19978.596ENSVVUG00000008633RNASEH18977.895Vulpes_vulpes
ENSRNOG00000008584Rnaseh19044.922ENSXETG00000030371-10044.961Xenopus_tropicalis
ENSRNOG00000008584Rnaseh19055.056ENSXETG00000001212rnaseh110045.312Xenopus_tropicalis
ENSRNOG00000008584Rnaseh19054.717ENSXMAG00000002357rnaseh18951.838Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000287magnesium ion binding-IEAFunction
GO:0003676nucleic acid binding-IEAFunction
GO:0004523RNA-DNA hybrid ribonuclease activity21873635.IBAFunction
GO:0004523RNA-DNA hybrid ribonuclease activity-ISOFunction
GO:0004523RNA-DNA hybrid ribonuclease activity-ISSFunction
GO:0005634nucleus-ISOComponent
GO:0005737cytoplasm-IEAComponent
GO:0005739mitochondrion-ISOComponent
GO:0006264mitochondrial DNA replication-ISOProcess
GO:0042803protein homodimerization activity-ISOFunction
GO:0043137DNA replication, removal of RNA primer21873635.IBAProcess
GO:0090502RNA phosphodiester bond hydrolysis, endonucleolytic21873635.IBAProcess

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