EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000008629 (Gene tree)
Gene ID: 296115
Gene Symbol: Secisbp2l
Alias: LOC296115|RGD1559930
Full Name: SECIS binding protein 2-like
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 45139 bases
Position: chr3:118006151-118051289
Accession: 1559930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000011551	Ribosomal_L7Ae	PF01248.26	1.4e-21	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000011551	-	6207	XM_008762152	ENSRNOP00000011551	1089 (aa)	-	D4A7V0

Gene Model

Click here to download ENSRNOG00000008629's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000008629's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000008629	Secisbp2l	99	87.832	ENSG00000138593	SECISBP2L	100	91.587	Homo_sapiens
ENSRNOG00000008629	Secisbp2l	94	62.830	ENSAPOG00000015429	SECISBP2L	97	62.072	Acanthochromis_polyacanthus
ENSRNOG00000008629	Secisbp2l	99	86.393	ENSAMEG00000001504	SECISBP2L	99	86.575	Ailuropoda_melanoleuca
ENSRNOG00000008629	Secisbp2l	88	72.800	ENSACIG00000020051	SECISBP2L	93	71.919	Amphilophus_citrinellus
ENSRNOG00000008629	Secisbp2l	94	62.914	ENSAOCG00000017002	SECISBP2L	97	62.152	Amphiprion_ocellaris
ENSRNOG00000008629	Secisbp2l	94	63.009	ENSAPEG00000024840	SECISBP2L	96	62.593	Amphiprion_percula
ENSRNOG00000008629	Secisbp2l	94	62.405	ENSATEG00000018252	SECISBP2L	97	62.127	Anabas_testudineus
ENSRNOG00000008629	Secisbp2l	99	77.015	ENSAPLG00000004694	SECISBP2L	99	77.198	Anas_platyrhynchos
ENSRNOG00000008629	Secisbp2l	95	75.000	ENSACAG00000006021	SECISBP2L	98	75.096	Anolis_carolinensis
ENSRNOG00000008629	Secisbp2l	99	87.660	ENSANAG00000027892	SECISBP2L	99	87.751	Aotus_nancymaae
ENSRNOG00000008629	Secisbp2l	94	62.154	ENSACLG00000017020	SECISBP2L	97	61.762	Astatotilapia_calliptera
ENSRNOG00000008629	Secisbp2l	92	67.899	ENSAMXG00000037811	SECISBP2L	96	70.525	Astyanax_mexicanus
ENSRNOG00000008629	Secisbp2l	99	86.273	ENSBTAG00000046553	SECISBP2L	99	86.364	Bos_taurus
ENSRNOG00000008629	Secisbp2l	99	87.832	ENSCJAG00000001637	SECISBP2L	99	87.923	Callithrix_jacchus
ENSRNOG00000008629	Secisbp2l	98	88.827	ENSCAFG00000014822	SECISBP2L	98	88.191	Canis_familiaris
ENSRNOG00000008629	Secisbp2l	99	85.845	ENSCHIG00000017527	SECISBP2L	99	85.936	Capra_hircus
ENSRNOG00000008629	Secisbp2l	99	86.556	ENSTSYG00000004333	SECISBP2L	99	86.648	Carlito_syrichta
ENSRNOG00000008629	Secisbp2l	98	81.157	ENSCAPG00000011554	SECISBP2L	97	81.157	Cavia_aperea
ENSRNOG00000008629	Secisbp2l	98	83.749	ENSCPOG00000003442	SECISBP2L	98	83.841	Cavia_porcellus
ENSRNOG00000008629	Secisbp2l	99	87.649	ENSCCAG00000030509	SECISBP2L	99	87.740	Cebus_capucinus
ENSRNOG00000008629	Secisbp2l	99	87.740	ENSCATG00000033967	SECISBP2L	99	87.832	Cercocebus_atys
ENSRNOG00000008629	Secisbp2l	98	84.608	ENSCLAG00000017094	SECISBP2L	96	84.701	Chinchilla_lanigera
ENSRNOG00000008629	Secisbp2l	99	87.923	ENSCSAG00000010632	SECISBP2L	99	88.015	Chlorocebus_sabaeus
ENSRNOG00000008629	Secisbp2l	79	81.556	ENSCHOG00000009317	SECISBP2L	79	81.778	Choloepus_hoffmanni
ENSRNOG00000008629	Secisbp2l	99	75.547	ENSCPBG00000024750	SECISBP2L	99	75.633	Chrysemys_picta_bellii
ENSRNOG00000008629	Secisbp2l	78	35.268	ENSCING00000024077	-	99	32.627	Ciona_intestinalis
ENSRNOG00000008629	Secisbp2l	99	87.740	ENSCANG00000029294	SECISBP2L	99	87.832	Colobus_angolensis_palliatus
ENSRNOG00000008629	Secisbp2l	99	92.011	ENSCGRG00001018900	Secisbp2l	99	92.011	Cricetulus_griseus_chok1gshd
ENSRNOG00000008629	Secisbp2l	99	91.867	ENSCGRG00000011372	Secisbp2l	99	91.867	Cricetulus_griseus_crigri
ENSRNOG00000008629	Secisbp2l	88	71.910	ENSCVAG00000010490	SECISBP2L	97	69.909	Cyprinodon_variegatus
ENSRNOG00000008629	Secisbp2l	99	85.064	ENSDNOG00000035508	SECISBP2L	99	85.155	Dasypus_novemcinctus
ENSRNOG00000008629	Secisbp2l	99	86.624	ENSDORG00000008662	Secisbp2l	99	86.533	Dipodomys_ordii
ENSRNOG00000008629	Secisbp2l	100	75.318	ENSETEG00000019519	SECISBP2L	100	75.590	Echinops_telfairi
ENSRNOG00000008629	Secisbp2l	99	86.442	ENSEASG00005016797	SECISBP2L	99	86.533	Equus_asinus_asinus
ENSRNOG00000008629	Secisbp2l	99	86.624	ENSECAG00000011253	SECISBP2L	99	86.996	Equus_caballus
ENSRNOG00000008629	Secisbp2l	94	88.265	ENSEEUG00000012692	SECISBP2L	94	88.265	Erinaceus_europaeus
ENSRNOG00000008629	Secisbp2l	94	61.696	ENSELUG00000004052	SECISBP2L	97	61.258	Esox_lucius
ENSRNOG00000008629	Secisbp2l	99	87.012	ENSFCAG00000022355	SECISBP2L	99	87.103	Felis_catus
ENSRNOG00000008629	Secisbp2l	96	77.307	ENSFALG00000011503	SECISBP2L	99	77.256	Ficedula_albicollis
ENSRNOG00000008629	Secisbp2l	81	88.488	ENSFDAG00000016793	SECISBP2L	98	88.488	Fukomys_damarensis
ENSRNOG00000008629	Secisbp2l	94	59.369	ENSFHEG00000002604	SECISBP2L	98	58.401	Fundulus_heteroclitus
ENSRNOG00000008629	Secisbp2l	87	78.161	ENSGMOG00000014876	SECISBP2L	92	67.593	Gadus_morhua
ENSRNOG00000008629	Secisbp2l	86	76.744	ENSGALG00000041362	SECISBP2L	99	72.763	Gallus_gallus
ENSRNOG00000008629	Secisbp2l	94	60.761	ENSGAFG00000005460	SECISBP2L	95	59.837	Gambusia_affinis
ENSRNOG00000008629	Secisbp2l	94	61.495	ENSGACG00000016786	SECISBP2L	99	61.213	Gasterosteus_aculeatus
ENSRNOG00000008629	Secisbp2l	97	75.704	ENSGAGG00000008607	SECISBP2L	99	75.610	Gopherus_agassizii
ENSRNOG00000008629	Secisbp2l	99	87.832	ENSGGOG00000007289	SECISBP2L	99	87.740	Gorilla_gorilla
ENSRNOG00000008629	Secisbp2l	88	72.419	ENSHBUG00000012549	SECISBP2L	97	71.473	Haplochromis_burtoni
ENSRNOG00000008629	Secisbp2l	98	84.672	ENSHGLG00000010779	SECISBP2L	98	84.949	Heterocephalus_glaber_female
ENSRNOG00000008629	Secisbp2l	98	82.446	ENSHGLG00100015772	SECISBP2L	98	81.929	Heterocephalus_glaber_male
ENSRNOG00000008629	Secisbp2l	84	69.887	ENSHCOG00000001763	SECISBP2L	93	68.380	Hippocampus_comes
ENSRNOG00000008629	Secisbp2l	99	87.876	ENSSTOG00000005317	SECISBP2L	99	87.967	Ictidomys_tridecemlineatus
ENSRNOG00000008629	Secisbp2l	98	84.274	ENSJJAG00000014644	-	99	84.181	Jaculus_jaculus
ENSRNOG00000008629	Secisbp2l	68	56.441	ENSKMAG00000003849	SECISBP2L	81	57.238	Kryptolebias_marmoratus
ENSRNOG00000008629	Secisbp2l	94	62.312	ENSLBEG00000005166	SECISBP2L	97	61.053	Labrus_bergylta
ENSRNOG00000008629	Secisbp2l	97	70.919	ENSLACG00000012542	SECISBP2L	98	70.919	Latimeria_chalumnae
ENSRNOG00000008629	Secisbp2l	94	67.339	ENSLOCG00000013180	SECISBP2L	98	66.542	Lepisosteus_oculatus
ENSRNOG00000008629	Secisbp2l	98	86.754	ENSLAFG00000006484	SECISBP2L	100	86.847	Loxodonta_africana
ENSRNOG00000008629	Secisbp2l	99	87.740	ENSMFAG00000001802	SECISBP2L	99	87.832	Macaca_fascicularis
ENSRNOG00000008629	Secisbp2l	99	87.649	ENSMMUG00000009837	SECISBP2L	99	87.740	Macaca_mulatta
ENSRNOG00000008629	Secisbp2l	99	87.740	ENSMNEG00000032007	SECISBP2L	99	87.832	Macaca_nemestrina
ENSRNOG00000008629	Secisbp2l	99	87.649	ENSMLEG00000040214	SECISBP2L	99	87.740	Mandrillus_leucophaeus
ENSRNOG00000008629	Secisbp2l	88	73.633	ENSMAMG00000011674	SECISBP2L	96	72.162	Mastacembelus_armatus
ENSRNOG00000008629	Secisbp2l	94	62.154	ENSMZEG00005012079	SECISBP2L	97	61.762	Maylandia_zebra
ENSRNOG00000008629	Secisbp2l	99	78.004	ENSMGAG00000007165	SECISBP2L	99	78.096	Meleagris_gallopavo
ENSRNOG00000008629	Secisbp2l	99	83.380	ENSMAUG00000012011	Secisbp2l	98	91.045	Mesocricetus_auratus
ENSRNOG00000008629	Secisbp2l	99	87.067	ENSMICG00000013007	SECISBP2L	99	87.158	Microcebus_murinus
ENSRNOG00000008629	Secisbp2l	99	92.117	ENSMOCG00000014560	Secisbp2l	99	92.209	Microtus_ochrogaster
ENSRNOG00000008629	Secisbp2l	99	80.550	ENSMODG00000002516	SECISBP2L	99	80.090	Monodelphis_domestica
ENSRNOG00000008629	Secisbp2l	94	63.083	ENSMALG00000012480	SECISBP2L	97	62.407	Monopterus_albus
ENSRNOG00000008629	Secisbp2l	100	94.679	MGP_CAROLIEiJ_G0024231	Secisbp2l	99	97.170	Mus_caroli
ENSRNOG00000008629	Secisbp2l	100	94.399	ENSMUSG00000035093	Secisbp2l	99	96.934	Mus_musculus
ENSRNOG00000008629	Secisbp2l	100	94.399	MGP_PahariEiJ_G0025677	Secisbp2l	99	96.462	Mus_pahari
ENSRNOG00000008629	Secisbp2l	100	94.679	MGP_SPRETEiJ_G0025151	Secisbp2l	100	100.000	Mus_spretus
ENSRNOG00000008629	Secisbp2l	99	87.079	ENSMPUG00000012321	SECISBP2L	99	87.170	Mustela_putorius_furo
ENSRNOG00000008629	Secisbp2l	99	85.936	ENSMLUG00000012918	SECISBP2L	99	85.845	Myotis_lucifugus
ENSRNOG00000008629	Secisbp2l	99	85.219	ENSNGAG00000019213	Secisbp2l	99	85.310	Nannospalax_galili
ENSRNOG00000008629	Secisbp2l	94	61.823	ENSNBRG00000022500	SECISBP2L	97	61.438	Neolamprologus_brichardi
ENSRNOG00000008629	Secisbp2l	99	87.557	ENSNLEG00000006102	SECISBP2L	99	87.466	Nomascus_leucogenys
ENSRNOG00000008629	Secisbp2l	75	81.201	ENSMEUG00000003127	SECISBP2L	76	81.201	Notamacropus_eugenii
ENSRNOG00000008629	Secisbp2l	99	78.545	ENSOPRG00000010893	SECISBP2L	99	78.636	Ochotona_princeps
ENSRNOG00000008629	Secisbp2l	98	82.775	ENSODEG00000007846	SECISBP2L	99	82.369	Octodon_degus
ENSRNOG00000008629	Secisbp2l	94	62.108	ENSONIG00000013343	SECISBP2L	99	61.798	Oreochromis_niloticus
ENSRNOG00000008629	Secisbp2l	100	86.491	ENSOCUG00000006443	SECISBP2L	100	86.582	Oryctolagus_cuniculus
ENSRNOG00000008629	Secisbp2l	94	61.968	ENSORLG00000002324	SECISBP2L	96	61.215	Oryzias_latipes
ENSRNOG00000008629	Secisbp2l	94	61.801	ENSORLG00020021894	SECISBP2L	98	61.045	Oryzias_latipes_hni
ENSRNOG00000008629	Secisbp2l	94	61.882	ENSORLG00015021578	SECISBP2L	96	61.272	Oryzias_latipes_hsok
ENSRNOG00000008629	Secisbp2l	82	70.880	ENSOMEG00000009535	SECISBP2L	97	68.155	Oryzias_melastigma
ENSRNOG00000008629	Secisbp2l	98	87.989	ENSOGAG00000013280	SECISBP2L	97	88.082	Otolemur_garnettii
ENSRNOG00000008629	Secisbp2l	99	86.570	ENSOARG00000021008	SECISBP2L	99	86.661	Ovis_aries
ENSRNOG00000008629	Secisbp2l	99	87.832	ENSPPAG00000036433	SECISBP2L	99	87.740	Pan_paniscus
ENSRNOG00000008629	Secisbp2l	99	87.012	ENSPPRG00000020790	SECISBP2L	99	87.103	Panthera_pardus
ENSRNOG00000008629	Secisbp2l	99	87.012	ENSPTIG00000020397	SECISBP2L	99	90.498	Panthera_tigris_altaica
ENSRNOG00000008629	Secisbp2l	99	87.923	ENSPTRG00000007050	SECISBP2L	99	87.832	Pan_troglodytes
ENSRNOG00000008629	Secisbp2l	99	87.740	ENSPANG00000017735	SECISBP2L	99	87.832	Papio_anubis
ENSRNOG00000008629	Secisbp2l	94	63.973	ENSPKIG00000020244	SECISBP2L	97	63.261	Paramormyrops_kingsleyae
ENSRNOG00000008629	Secisbp2l	99	76.449	ENSPSIG00000011270	SECISBP2L	99	76.541	Pelodiscus_sinensis
ENSRNOG00000008629	Secisbp2l	94	59.690	ENSPMGG00000023554	SECISBP2L	96	59.091	Periophthalmus_magnuspinnatus
ENSRNOG00000008629	Secisbp2l	99	92.018	ENSPEMG00000010577	Secisbp2l	99	92.110	Peromyscus_maniculatus_bairdii
ENSRNOG00000008629	Secisbp2l	99	80.383	ENSPCIG00000018047	SECISBP2L	99	80.748	Phascolarctos_cinereus
ENSRNOG00000008629	Secisbp2l	94	60.782	ENSPFOG00000004217	SECISBP2L	98	59.853	Poecilia_formosa
ENSRNOG00000008629	Secisbp2l	94	60.660	ENSPLAG00000017301	SECISBP2L	98	59.817	Poecilia_latipinna
ENSRNOG00000008629	Secisbp2l	94	60.697	ENSPMEG00000000627	SECISBP2L	98	59.725	Poecilia_mexicana
ENSRNOG00000008629	Secisbp2l	90	60.039	ENSPREG00000008660	SECISBP2L	94	60.195	Poecilia_reticulata
ENSRNOG00000008629	Secisbp2l	99	87.832	ENSPPYG00000006459	SECISBP2L	99	87.923	Pongo_abelii
ENSRNOG00000008629	Secisbp2l	62	75.758	ENSPCAG00000009162	-	62	75.758	Procavia_capensis
ENSRNOG00000008629	Secisbp2l	99	85.481	ENSPVAG00000011821	SECISBP2L	99	85.662	Pteropus_vampyrus
ENSRNOG00000008629	Secisbp2l	94	61.977	ENSPNYG00000008760	SECISBP2L	97	61.589	Pundamilia_nyererei
ENSRNOG00000008629	Secisbp2l	99	87.649	ENSRBIG00000030953	SECISBP2L	99	87.740	Rhinopithecus_bieti
ENSRNOG00000008629	Secisbp2l	99	87.740	ENSRROG00000042289	SECISBP2L	99	87.832	Rhinopithecus_roxellana
ENSRNOG00000008629	Secisbp2l	99	87.832	ENSSBOG00000024354	SECISBP2L	99	87.740	Saimiri_boliviensis_boliviensis
ENSRNOG00000008629	Secisbp2l	99	80.716	ENSSHAG00000016105	SECISBP2L	99	80.716	Sarcophilus_harrisii
ENSRNOG00000008629	Secisbp2l	90	71.166	ENSSFOG00015013377	secisbp2l	94	71.626	Scleropages_formosus
ENSRNOG00000008629	Secisbp2l	94	60.499	ENSSFOG00015017673	SECISBP2L	97	60.244	Scleropages_formosus
ENSRNOG00000008629	Secisbp2l	94	62.312	ENSSMAG00000021285	SECISBP2L	96	61.909	Scophthalmus_maximus
ENSRNOG00000008629	Secisbp2l	94	63.311	ENSSDUG00000016367	SECISBP2L	96	62.894	Seriola_dumerili
ENSRNOG00000008629	Secisbp2l	88	73.878	ENSSLDG00000009089	SECISBP2L	97	72.926	Seriola_lalandi_dorsalis
ENSRNOG00000008629	Secisbp2l	66	87.037	ENSSARG00000010659	-	66	87.037	Sorex_araneus
ENSRNOG00000008629	Secisbp2l	99	73.814	ENSSPUG00000011486	SECISBP2L	99	73.723	Sphenodon_punctatus
ENSRNOG00000008629	Secisbp2l	94	62.606	ENSSPAG00000019869	SECISBP2L	96	62.291	Stegastes_partitus
ENSRNOG00000008629	Secisbp2l	99	86.260	ENSSSCG00000004653	SECISBP2L	99	86.351	Sus_scrofa
ENSRNOG00000008629	Secisbp2l	97	78.257	ENSTGUG00000007252	-	100	78.351	Taeniopygia_guttata
ENSRNOG00000008629	Secisbp2l	95	61.765	ENSTRUG00000016925	SECISBP2L	96	61.287	Takifugu_rubripes
ENSRNOG00000008629	Secisbp2l	96	60.771	ENSTNIG00000009531	SECISBP2L	99	61.006	Tetraodon_nigroviridis
ENSRNOG00000008629	Secisbp2l	99	87.000	ENSTTRG00000009412	SECISBP2L	99	87.091	Tursiops_truncatus
ENSRNOG00000008629	Secisbp2l	99	85.441	ENSUMAG00000014412	SECISBP2L	99	85.805	Ursus_maritimus
ENSRNOG00000008629	Secisbp2l	99	85.256	ENSVPAG00000008350	SECISBP2L	99	85.348	Vicugna_pacos
ENSRNOG00000008629	Secisbp2l	98	88.734	ENSVVUG00000016354	SECISBP2L	97	88.827	Vulpes_vulpes
ENSRNOG00000008629	Secisbp2l	96	69.829	ENSXETG00000008783	secisbp2l	97	69.545	Xenopus_tropicalis
ENSRNOG00000008629	Secisbp2l	94	58.634	ENSXCOG00000018386	SECISBP2L	98	58.630	Xiphophorus_couchianus
ENSRNOG00000008629	Secisbp2l	94	60.923	ENSXMAG00000002266	SECISBP2L	98	59.619	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001514	selenocysteine incorporation	21873635.	IBA	Process
GO:0003730	mRNA 3'-UTR binding	21873635.	IBA	Function
GO:0035368	selenocysteine insertion sequence binding	21873635.	IBA	Function
GO:0043021	ribonucleoprotein complex binding	21873635.	IBA	Function
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component