EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000008765 (Gene tree)
Gene ID: 310250
Gene Symbol: Zfhx4
Alias: LOC310250|RGD1563022
Full Name: zinc finger homeobox 4
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 186800 bases
Position: chr2:98423569-98610368
Accession: 1563022
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000011641	zf-C2H2	PF00096.26	4.5e-15	1	2
ENSRNOP00000011641	zf-C2H2	PF00096.26	4.5e-15	2	2
ENSRNOP00000011641	zf-met	PF12874.7	2.9e-05	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000011641	-	13927	XM_006232162	ENSRNOP00000011641	3593 (aa)	XP_006232224	D4A3U5

Gene Model

Click here to download ENSRNOG00000008765's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000008765's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000008765	Zfhx4	100	91.725	ENSG00000091656	ZFHX4	100	94.268	Homo_sapiens
ENSRNOG00000008765	Zfhx4	53	58.869	ENSAPOG00000018287	zfhx4	53	59.432	Acanthochromis_polyacanthus
ENSRNOG00000008765	Zfhx4	100	88.748	ENSAMEG00000016203	ZFHX4	100	88.858	Ailuropoda_melanoleuca
ENSRNOG00000008765	Zfhx4	98	66.480	ENSACIG00000002805	zfhx4	100	59.810	Amphilophus_citrinellus
ENSRNOG00000008765	Zfhx4	52	62.969	ENSAOCG00000010470	zfhx4	75	66.475	Amphiprion_ocellaris
ENSRNOG00000008765	Zfhx4	97	64.031	ENSAPEG00000024228	zfhx4	99	63.891	Amphiprion_percula
ENSRNOG00000008765	Zfhx4	67	65.445	ENSATEG00000015997	zfhx4	69	65.854	Anabas_testudineus
ENSRNOG00000008765	Zfhx4	100	84.649	ENSAPLG00000012910	ZFHX4	100	84.114	Anas_platyrhynchos
ENSRNOG00000008765	Zfhx4	100	91.697	ENSANAG00000034150	ZFHX4	100	91.586	Aotus_nancymaae
ENSRNOG00000008765	Zfhx4	53	58.849	ENSACLG00000020930	zfhx4	53	62.944	Astatotilapia_calliptera
ENSRNOG00000008765	Zfhx4	98	69.758	ENSAMXG00000013609	zfhx4	100	69.037	Astyanax_mexicanus
ENSRNOG00000008765	Zfhx4	100	88.660	ENSBTAG00000033268	ZFHX4	100	88.763	Bos_taurus
ENSRNOG00000008765	Zfhx4	100	90.791	ENSCJAG00000000517	ZFHX4	100	91.067	Callithrix_jacchus
ENSRNOG00000008765	Zfhx4	55	87.816	ENSCAFG00000008310	ZFHX4	100	89.225	Canis_familiaris
ENSRNOG00000008765	Zfhx4	100	88.580	ENSCHIG00000017123	ZFHX4	100	88.656	Capra_hircus
ENSRNOG00000008765	Zfhx4	100	89.238	ENSTSYG00000010369	ZFHX4	100	89.376	Carlito_syrichta
ENSRNOG00000008765	Zfhx4	86	89.049	ENSCPOG00000012693	ZFHX4	100	88.729	Cavia_porcellus
ENSRNOG00000008765	Zfhx4	100	90.764	ENSCCAG00000026493	ZFHX4	100	91.039	Cebus_capucinus
ENSRNOG00000008765	Zfhx4	100	91.067	ENSCATG00000033950	ZFHX4	100	91.315	Cercocebus_atys
ENSRNOG00000008765	Zfhx4	99	89.900	ENSCLAG00000011659	ZFHX4	100	88.035	Chinchilla_lanigera
ENSRNOG00000008765	Zfhx4	100	91.701	ENSCSAG00000013465	ZFHX4	100	91.951	Chlorocebus_sabaeus
ENSRNOG00000008765	Zfhx4	100	91.037	ENSCANG00000034083	ZFHX4	100	91.285	Colobus_angolensis_palliatus
ENSRNOG00000008765	Zfhx4	100	94.009	ENSCGRG00001011235	Zfhx4	100	94.009	Cricetulus_griseus_chok1gshd
ENSRNOG00000008765	Zfhx4	98	60.664	ENSCSEG00000008391	zfhx4	100	61.870	Cynoglossus_semilaevis
ENSRNOG00000008765	Zfhx4	52	60.779	ENSCVAG00000003822	zfhx4	53	61.472	Cyprinodon_variegatus
ENSRNOG00000008765	Zfhx4	98	69.145	ENSDARG00000075542	zfhx4	98	69.732	Danio_rerio
ENSRNOG00000008765	Zfhx4	93	90.076	ENSDNOG00000038560	ZFHX4	99	90.076	Dasypus_novemcinctus
ENSRNOG00000008765	Zfhx4	100	90.924	ENSDORG00000016167	Zfhx4	100	90.647	Dipodomys_ordii
ENSRNOG00000008765	Zfhx4	85	92.500	ENSETEG00000004672	ZFHX4	85	92.500	Echinops_telfairi
ENSRNOG00000008765	Zfhx4	100	89.091	ENSEASG00005020537	ZFHX4	100	89.063	Equus_asinus_asinus
ENSRNOG00000008765	Zfhx4	100	89.703	ENSECAG00000022611	ZFHX4	100	89.923	Equus_caballus
ENSRNOG00000008765	Zfhx4	91	91.130	ENSEEUG00000007585	ZFHX4	88	91.043	Erinaceus_europaeus
ENSRNOG00000008765	Zfhx4	92	65.171	ENSELUG00000009500	zfhx4	98	65.926	Esox_lucius
ENSRNOG00000008765	Zfhx4	100	89.956	ENSFCAG00000015688	ZFHX4	100	90.342	Felis_catus
ENSRNOG00000008765	Zfhx4	55	84.810	ENSFALG00000008584	ZFHX4	54	83.747	Ficedula_albicollis
ENSRNOG00000008765	Zfhx4	100	90.518	ENSFDAG00000018199	ZFHX4	100	90.436	Fukomys_damarensis
ENSRNOG00000008765	Zfhx4	98	63.696	ENSFHEG00000003914	zfhx4	97	61.391	Fundulus_heteroclitus
ENSRNOG00000008765	Zfhx4	64	69.409	ENSGMOG00000001910	zfhx4	88	64.124	Gadus_morhua
ENSRNOG00000008765	Zfhx4	55	83.508	ENSGALG00000037164	ZFHX4	100	84.582	Gallus_gallus
ENSRNOG00000008765	Zfhx4	55	57.802	ENSGAFG00000009778	zfhx4	58	57.777	Gambusia_affinis
ENSRNOG00000008765	Zfhx4	98	61.375	ENSGACG00000002418	zfhx4	100	61.142	Gasterosteus_aculeatus
ENSRNOG00000008765	Zfhx4	92	89.144	ENSGAGG00000017044	ZFHX4	95	89.635	Gopherus_agassizii
ENSRNOG00000008765	Zfhx4	100	91.067	ENSGGOG00000024837	ZFHX4	100	91.343	Gorilla_gorilla
ENSRNOG00000008765	Zfhx4	53	58.897	ENSHBUG00000023412	zfhx4	53	62.944	Haplochromis_burtoni
ENSRNOG00000008765	Zfhx4	100	90.510	ENSHGLG00000007968	ZFHX4	100	90.566	Heterocephalus_glaber_female
ENSRNOG00000008765	Zfhx4	100	89.686	ENSHGLG00100003129	ZFHX4	100	89.823	Heterocephalus_glaber_male
ENSRNOG00000008765	Zfhx4	98	57.997	ENSHCOG00000012979	zfhx4	75	65.414	Hippocampus_comes
ENSRNOG00000008765	Zfhx4	98	69.962	ENSIPUG00000014739	zfhx4	99	70.413	Ictalurus_punctatus
ENSRNOG00000008765	Zfhx4	100	90.493	ENSJJAG00000022978	Zfhx4	100	90.353	Jaculus_jaculus
ENSRNOG00000008765	Zfhx4	98	64.790	ENSKMAG00000016330	zfhx4	95	65.944	Kryptolebias_marmoratus
ENSRNOG00000008765	Zfhx4	55	58.736	ENSLBEG00000021697	zfhx4	55	59.322	Labrus_bergylta
ENSRNOG00000008765	Zfhx4	98	72.201	ENSLOCG00000013472	zfhx4	100	71.962	Lepisosteus_oculatus
ENSRNOG00000008765	Zfhx4	100	89.487	ENSLAFG00000014395	ZFHX4	100	89.873	Loxodonta_africana
ENSRNOG00000008765	Zfhx4	100	91.230	ENSMFAG00000034757	ZFHX4	100	91.478	Macaca_fascicularis
ENSRNOG00000008765	Zfhx4	100	91.230	ENSMMUG00000019414	ZFHX4	100	91.478	Macaca_mulatta
ENSRNOG00000008765	Zfhx4	100	91.258	ENSMNEG00000041913	ZFHX4	100	91.506	Macaca_nemestrina
ENSRNOG00000008765	Zfhx4	100	91.067	ENSMLEG00000038977	ZFHX4	100	91.315	Mandrillus_leucophaeus
ENSRNOG00000008765	Zfhx4	71	65.082	ENSMAMG00000022166	zfhx4	74	66.289	Mastacembelus_armatus
ENSRNOG00000008765	Zfhx4	53	58.849	ENSMZEG00005021931	zfhx4	53	62.944	Maylandia_zebra
ENSRNOG00000008765	Zfhx4	100	93.187	ENSMAUG00000021772	-	100	93.576	Mesocricetus_auratus
ENSRNOG00000008765	Zfhx4	100	90.949	ENSMICG00000008252	ZFHX4	100	91.199	Microcebus_murinus
ENSRNOG00000008765	Zfhx4	100	94.244	ENSMOCG00000021103	Zfhx4	100	94.188	Microtus_ochrogaster
ENSRNOG00000008765	Zfhx4	80	62.266	ENSMMOG00000004800	zfhx4	76	64.020	Mola_mola
ENSRNOG00000008765	Zfhx4	55	85.548	ENSMODG00000006777	ZFHX4	100	87.099	Monodelphis_domestica
ENSRNOG00000008765	Zfhx4	59	86.029	ENSMALG00000006928	zfhx4	90	77.444	Monopterus_albus
ENSRNOG00000008765	Zfhx4	100	95.271	MGP_CAROLIEiJ_G0024825	Zfhx4	100	95.216	Mus_caroli
ENSRNOG00000008765	Zfhx4	100	94.828	ENSMUSG00000025255	Zfhx4	100	94.772	Mus_musculus
ENSRNOG00000008765	Zfhx4	100	94.992	MGP_PahariEiJ_G0026273	Zfhx4	100	94.964	Mus_pahari
ENSRNOG00000008765	Zfhx4	100	94.631	MGP_SPRETEiJ_G0025754	Zfhx4	100	94.576	Mus_spretus
ENSRNOG00000008765	Zfhx4	100	90.169	ENSMPUG00000010092	ZFHX4	100	90.197	Mustela_putorius_furo
ENSRNOG00000008765	Zfhx4	85	83.791	ENSMLUG00000016989	ZFHX4	88	84.158	Myotis_lucifugus
ENSRNOG00000008765	Zfhx4	53	58.704	ENSNBRG00000004502	zfhx4	53	59.238	Neolamprologus_brichardi
ENSRNOG00000008765	Zfhx4	92	92.248	ENSNLEG00000001972	ZFHX4	99	92.442	Nomascus_leucogenys
ENSRNOG00000008765	Zfhx4	56	89.756	ENSOPRG00000004454	-	55	89.756	Ochotona_princeps
ENSRNOG00000008765	Zfhx4	100	88.963	ENSODEG00000001283	ZFHX4	100	89.102	Octodon_degus
ENSRNOG00000008765	Zfhx4	100	61.011	ENSONIG00000014495	zfhx4	100	64.024	Oreochromis_niloticus
ENSRNOG00000008765	Zfhx4	100	90.107	ENSOCUG00000001723	ZFHX4	100	89.777	Oryctolagus_cuniculus
ENSRNOG00000008765	Zfhx4	53	58.619	ENSORLG00000006928	zfhx4	74	66.982	Oryzias_latipes
ENSRNOG00000008765	Zfhx4	50	63.764	ENSORLG00020003276	zfhx4	73	67.045	Oryzias_latipes_hni
ENSRNOG00000008765	Zfhx4	98	61.553	ENSOMEG00000014431	zfhx4	97	61.040	Oryzias_melastigma
ENSRNOG00000008765	Zfhx4	100	90.621	ENSOGAG00000000486	ZFHX4	100	90.593	Otolemur_garnettii
ENSRNOG00000008765	Zfhx4	100	88.230	ENSOARG00000007353	ZFHX4	100	88.224	Ovis_aries
ENSRNOG00000008765	Zfhx4	82	90.833	ENSPPAG00000029240	ZFHX4	100	91.201	Pan_paniscus
ENSRNOG00000008765	Zfhx4	92	92.328	ENSPPRG00000014119	ZFHX4	92	92.328	Panthera_pardus
ENSRNOG00000008765	Zfhx4	100	87.942	ENSPTIG00000007657	ZFHX4	100	88.140	Panthera_tigris_altaica
ENSRNOG00000008765	Zfhx4	100	91.177	ENSPTRG00000020358	ZFHX4	100	91.453	Pan_troglodytes
ENSRNOG00000008765	Zfhx4	100	91.230	ENSPANG00000023610	ZFHX4	100	91.478	Papio_anubis
ENSRNOG00000008765	Zfhx4	100	69.404	ENSPKIG00000006160	zfhx4	100	69.478	Paramormyrops_kingsleyae
ENSRNOG00000008765	Zfhx4	55	84.861	ENSPSIG00000003765	ZFHX4	64	82.709	Pelodiscus_sinensis
ENSRNOG00000008765	Zfhx4	63	79.268	ENSPMGG00000007123	zfhx4	88	78.173	Periophthalmus_magnuspinnatus
ENSRNOG00000008765	Zfhx4	98	60.352	ENSPFOG00000009152	zfhx4	99	60.785	Poecilia_formosa
ENSRNOG00000008765	Zfhx4	52	63.015	ENSPLAG00000015099	zfhx4	99	63.504	Poecilia_latipinna
ENSRNOG00000008765	Zfhx4	72	64.666	ENSPMEG00000022456	zfhx4	95	65.986	Poecilia_mexicana
ENSRNOG00000008765	Zfhx4	52	62.785	ENSPREG00000016234	zfhx4	55	58.927	Poecilia_reticulata
ENSRNOG00000008765	Zfhx4	100	90.894	ENSPCOG00000021426	ZFHX4	100	90.728	Propithecus_coquereli
ENSRNOG00000008765	Zfhx4	99	84.109	ENSPVAG00000004200	ZFHX4	99	84.577	Pteropus_vampyrus
ENSRNOG00000008765	Zfhx4	100	67.490	ENSPNAG00000022085	zfhx4	100	68.887	Pygocentrus_nattereri
ENSRNOG00000008765	Zfhx4	100	90.957	ENSRBIG00000028413	ZFHX4	100	91.205	Rhinopithecus_bieti
ENSRNOG00000008765	Zfhx4	100	90.074	ENSRROG00000031310	ZFHX4	100	90.378	Rhinopithecus_roxellana
ENSRNOG00000008765	Zfhx4	100	90.320	ENSSBOG00000026983	ZFHX4	100	90.568	Saimiri_boliviensis_boliviensis
ENSRNOG00000008765	Zfhx4	55	85.399	ENSSHAG00000013776	ZFHX4	100	87.431	Sarcophilus_harrisii
ENSRNOG00000008765	Zfhx4	100	70.091	ENSSFOG00015011589	zfhx4	100	69.871	Scleropages_formosus
ENSRNOG00000008765	Zfhx4	98	61.508	ENSSMAG00000019081	zfhx4	53	59.325	Scophthalmus_maximus
ENSRNOG00000008765	Zfhx4	52	62.240	ENSSDUG00000004192	zfhx4	54	62.934	Seriola_dumerili
ENSRNOG00000008765	Zfhx4	52	62.489	ENSSLDG00000010919	zfhx4	53	63.557	Seriola_lalandi_dorsalis
ENSRNOG00000008765	Zfhx4	89	91.108	ENSSARG00000001090	ZFHX4	88	90.816	Sorex_araneus
ENSRNOG00000008765	Zfhx4	55	82.468	ENSSPUG00000013032	ZFHX4	55	82.118	Sphenodon_punctatus
ENSRNOG00000008765	Zfhx4	53	59.846	ENSSPAG00000003479	zfhx4	53	60.010	Stegastes_partitus
ENSRNOG00000008765	Zfhx4	100	89.956	ENSSSCG00000006169	ZFHX4	100	89.597	Sus_scrofa
ENSRNOG00000008765	Zfhx4	97	87.198	ENSTGUG00000011605	ZFHX4	97	87.424	Taeniopygia_guttata
ENSRNOG00000008765	Zfhx4	76	67.979	ENSTNIG00000008122	zfhx4	96	67.863	Tetraodon_nigroviridis
ENSRNOG00000008765	Zfhx4	93	90.895	ENSTBEG00000012567	ZFHX4	94	90.895	Tupaia_belangeri
ENSRNOG00000008765	Zfhx4	97	87.509	ENSTTRG00000002634	ZFHX4	97	87.434	Tursiops_truncatus
ENSRNOG00000008765	Zfhx4	100	90.250	ENSUAMG00000006601	ZFHX4	100	90.139	Ursus_americanus
ENSRNOG00000008765	Zfhx4	100	88.947	ENSUMAG00000014815	ZFHX4	100	88.754	Ursus_maritimus
ENSRNOG00000008765	Zfhx4	100	87.746	ENSVVUG00000019627	ZFHX4	100	88.328	Vulpes_vulpes
ENSRNOG00000008765	Zfhx4	100	75.996	ENSXETG00000017151	zfhx4	100	75.521	Xenopus_tropicalis
ENSRNOG00000008765	Zfhx4	98	58.732	ENSXCOG00000006449	zfhx4	98	66.289	Xiphophorus_couchianus
ENSRNOG00000008765	Zfhx4	96	65.324	ENSXMAG00000000693	zfhx4	95	66.002	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	21873635.	IBA	Function
GO:0003674	molecular_function	-	ND	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0008150	biological_process	-	ND	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0044212	transcription regulatory region DNA binding	21873635.	IBA	Function
GO:0045893	positive regulation of transcription, DNA-templated	21873635.	IBA	Process