EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000008978 (Gene tree)
Gene ID: 314999
Gene Symbol: Trmt12
Alias: LOC314999|RGD1307127
Full Name: tRNA methyltransferase 12
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 1625 bases
Position: chr7:98748547-98750171
Accession: 1307127
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000011874	Met_10	PF02475.16	2.2e-29	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000011876	-	1625	-	ENSRNOP00000011874	437 (aa)	-	Q4V8B8

Gene Model

Click here to download ENSRNOG00000008978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000008978's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000008978	Trmt12	100	82.232	ENSG00000183665	TRMT12	98	82.232	Homo_sapiens
ENSRNOG00000008978	Trmt12	95	51.449	ENSAPOG00000011979	trmt12	97	51.449	Acanthochromis_polyacanthus
ENSRNOG00000008978	Trmt12	100	82.688	ENSAMEG00000019612	TRMT12	98	82.688	Ailuropoda_melanoleuca
ENSRNOG00000008978	Trmt12	93	50.000	ENSACIG00000012982	trmt12	99	50.000	Amphilophus_citrinellus
ENSRNOG00000008978	Trmt12	92	52.250	ENSAOCG00000020570	trmt12	98	52.250	Amphiprion_ocellaris
ENSRNOG00000008978	Trmt12	92	52.250	ENSAPEG00000006335	trmt12	98	52.250	Amphiprion_percula
ENSRNOG00000008978	Trmt12	95	52.058	ENSATEG00000018316	trmt12	97	52.058	Anabas_testudineus
ENSRNOG00000008978	Trmt12	94	51.214	ENSACLG00000001008	trmt12	96	51.214	Astatotilapia_calliptera
ENSRNOG00000008978	Trmt12	95	53.110	ENSAMXG00000040366	trmt12	97	53.110	Astyanax_mexicanus
ENSRNOG00000008978	Trmt12	98	82.135	ENSBTAG00000020398	TRMT12	93	82.135	Bos_taurus
ENSRNOG00000008978	Trmt12	52	38.865	WBGene00009586	F40F9.10	53	37.349	Caenorhabditis_elegans
ENSRNOG00000008978	Trmt12	100	81.093	ENSCJAG00000022174	TRMT12	98	81.093	Callithrix_jacchus
ENSRNOG00000008978	Trmt12	100	80.866	ENSCAFG00000001040	TRMT12	100	80.866	Canis_familiaris
ENSRNOG00000008978	Trmt12	100	80.866	ENSCAFG00020006500	TRMT12	100	80.866	Canis_lupus_dingo
ENSRNOG00000008978	Trmt12	99	83.102	ENSCHIG00000016574	TRMT12	98	83.102	Capra_hircus
ENSRNOG00000008978	Trmt12	98	80.186	ENSCPOG00000026520	TRMT12	96	80.186	Cavia_porcellus
ENSRNOG00000008978	Trmt12	100	81.549	ENSCSAG00000018615	TRMT12	98	81.549	Chlorocebus_sabaeus
ENSRNOG00000008978	Trmt12	97	64.679	ENSCPBG00000014290	TRMT12	95	64.679	Chrysemys_picta_bellii
ENSRNOG00000008978	Trmt12	71	44.444	ENSCING00000019633	-	97	44.444	Ciona_intestinalis
ENSRNOG00000008978	Trmt12	73	47.500	ENSCSAVG00000000415	-	93	47.500	Ciona_savignyi
ENSRNOG00000008978	Trmt12	98	63.741	ENSCGRG00001014834	Trmt12	98	63.594	Cricetulus_griseus_chok1gshd
ENSRNOG00000008978	Trmt12	95	49.637	ENSCSEG00000002675	trmt12	92	49.637	Cynoglossus_semilaevis
ENSRNOG00000008978	Trmt12	95	50.839	ENSCVAG00000005590	trmt12	97	50.839	Cyprinodon_variegatus
ENSRNOG00000008978	Trmt12	95	51.084	ENSDARG00000060338	trmt12	96	55.311	Danio_rerio
ENSRNOG00000008978	Trmt12	100	74.376	ENSETEG00000009373	TRMT12	98	74.376	Echinops_telfairi
ENSRNOG00000008978	Trmt12	100	82.232	ENSEASG00005022441	TRMT12	100	82.232	Equus_asinus_asinus
ENSRNOG00000008978	Trmt12	100	76.941	ENSEEUG00000004844	TRMT12	98	76.941	Erinaceus_europaeus
ENSRNOG00000008978	Trmt12	95	50.361	ENSELUG00000004240	trmt12	99	51.015	Esox_lucius
ENSRNOG00000008978	Trmt12	65	64.664	ENSFALG00000003825	TRMT12	97	71.628	Ficedula_albicollis
ENSRNOG00000008978	Trmt12	100	81.093	ENSFDAG00000016647	TRMT12	100	81.093	Fukomys_damarensis
ENSRNOG00000008978	Trmt12	92	42.857	ENSFHEG00000017338	trmt12	98	42.857	Fundulus_heteroclitus
ENSRNOG00000008978	Trmt12	84	62.032	ENSGALG00000006773	TRMT12	79	62.032	Gallus_gallus
ENSRNOG00000008978	Trmt12	94	49.029	ENSGAFG00000020056	trmt12	96	49.029	Gambusia_affinis
ENSRNOG00000008978	Trmt12	89	51.938	ENSGACG00000017351	trmt12	100	50.732	Gasterosteus_aculeatus
ENSRNOG00000008978	Trmt12	98	64.009	ENSGAGG00000006032	TRMT12	99	64.009	Gopherus_agassizii
ENSRNOG00000008978	Trmt12	94	51.214	ENSHBUG00000016412	trmt12	96	51.214	Haplochromis_burtoni
ENSRNOG00000008978	Trmt12	99	81.735	ENSHGLG00000020498	TRMT12	99	81.735	Heterocephalus_glaber_female
ENSRNOG00000008978	Trmt12	99	81.963	ENSHGLG00100020132	TRMT12	99	81.963	Heterocephalus_glaber_male
ENSRNOG00000008978	Trmt12	94	49.757	ENSHCOG00000005050	trmt12	95	53.143	Hippocampus_comes
ENSRNOG00000008978	Trmt12	97	51.529	ENSIPUG00000018011	trmt12	91	51.529	Ictalurus_punctatus
ENSRNOG00000008978	Trmt12	99	81.797	ENSSTOG00000030617	TRMT12	98	82.488	Ictidomys_tridecemlineatus
ENSRNOG00000008978	Trmt12	95	49.639	ENSKMAG00000000891	trmt12	96	49.639	Kryptolebias_marmoratus
ENSRNOG00000008978	Trmt12	54	56.303	ENSLBEG00000017456	-	88	56.303	Labrus_bergylta
ENSRNOG00000008978	Trmt12	94	48.786	ENSLBEG00000028712	trmt12	96	48.786	Labrus_bergylta
ENSRNOG00000008978	Trmt12	99	58.166	ENSLACG00000015869	TRMT12	98	58.166	Latimeria_chalumnae
ENSRNOG00000008978	Trmt12	97	56.738	ENSLOCG00000015290	trmt12	99	56.738	Lepisosteus_oculatus
ENSRNOG00000008978	Trmt12	98	82.831	ENSLAFG00000012519	TRMT12	98	82.831	Loxodonta_africana
ENSRNOG00000008978	Trmt12	99	82.569	ENSMMUG00000015490	TRMT12	98	82.569	Macaca_mulatta
ENSRNOG00000008978	Trmt12	95	50.356	ENSMAMG00000020311	trmt12	97	50.356	Mastacembelus_armatus
ENSRNOG00000008978	Trmt12	94	51.214	ENSMZEG00005007349	trmt12	96	51.214	Maylandia_zebra
ENSRNOG00000008978	Trmt12	97	59.346	ENSMGAG00000004174	TRMT12	95	59.346	Meleagris_gallopavo
ENSRNOG00000008978	Trmt12	93	50.739	ENSMMOG00000000412	trmt12	95	50.739	Mola_mola
ENSRNOG00000008978	Trmt12	98	69.159	ENSMODG00000011798	-	88	69.159	Monodelphis_domestica
ENSRNOG00000008978	Trmt12	100	67.123	ENSMODG00000021403	-	98	67.123	Monodelphis_domestica
ENSRNOG00000008978	Trmt12	94	50.971	ENSMALG00000008668	trmt12	96	50.971	Monopterus_albus
ENSRNOG00000008978	Trmt12	100	90.389	MGP_CAROLIEiJ_G0019820	Trmt12	98	90.389	Mus_caroli
ENSRNOG00000008978	Trmt12	99	90.741	ENSMUSG00000037085	Trmt12	97	90.741	Mus_musculus
ENSRNOG00000008978	Trmt12	99	90.138	MGP_PahariEiJ_G0019829	Trmt12	98	90.138	Mus_pahari
ENSRNOG00000008978	Trmt12	99	90.509	MGP_SPRETEiJ_G0020717	Trmt12	97	90.509	Mus_spretus
ENSRNOG00000008978	Trmt12	100	82.232	ENSMPUG00000019150	TRMT12	98	82.232	Mustela_putorius_furo
ENSRNOG00000008978	Trmt12	100	79.271	ENSMLUG00000003753	TRMT12	100	79.271	Myotis_lucifugus
ENSRNOG00000008978	Trmt12	100	84.703	ENSNGAG00000014548	Trmt12	100	84.703	Nannospalax_galili
ENSRNOG00000008978	Trmt12	93	51.351	ENSNBRG00000021510	trmt12	95	51.351	Neolamprologus_brichardi
ENSRNOG00000008978	Trmt12	99	70.670	ENSOPRG00000008067	TRMT12	97	70.670	Ochotona_princeps
ENSRNOG00000008978	Trmt12	100	80.866	ENSODEG00000018933	TRMT12	100	80.866	Octodon_degus
ENSRNOG00000008978	Trmt12	94	51.699	ENSONIG00000002614	trmt12	96	51.699	Oreochromis_niloticus
ENSRNOG00000008978	Trmt12	99	64.747	ENSOANG00000009987	TRMT12	99	64.747	Ornithorhynchus_anatinus
ENSRNOG00000008978	Trmt12	99	75.917	ENSOCUG00000026379	TRMT12	97	75.917	Oryctolagus_cuniculus
ENSRNOG00000008978	Trmt12	95	51.816	ENSORLG00000001280	trmt12	96	52.058	Oryzias_latipes
ENSRNOG00000008978	Trmt12	94	51.456	ENSORLG00020000708	trmt12	96	51.699	Oryzias_latipes_hni
ENSRNOG00000008978	Trmt12	94	51.699	ENSORLG00015012344	trmt12	96	51.699	Oryzias_latipes_hsok
ENSRNOG00000008978	Trmt12	95	51.090	ENSOMEG00000015267	trmt12	95	51.090	Oryzias_melastigma
ENSRNOG00000008978	Trmt12	100	82.232	ENSOGAG00000015845	TRMT12	100	82.232	Otolemur_garnettii
ENSRNOG00000008978	Trmt12	97	55.189	ENSPKIG00000004640	trmt12	99	55.448	Paramormyrops_kingsleyae
ENSRNOG00000008978	Trmt12	59	67.164	ENSPSIG00000003476	TRMT12	99	67.164	Pelodiscus_sinensis
ENSRNOG00000008978	Trmt12	95	47.585	ENSPMGG00000016356	trmt12	94	47.585	Periophthalmus_magnuspinnatus
ENSRNOG00000008978	Trmt12	100	68.950	ENSPCIG00000002967	TRMT12	90	68.950	Phascolarctos_cinereus
ENSRNOG00000008978	Trmt12	99	47.100	ENSPFOG00000016931	trmt12	99	47.100	Poecilia_formosa
ENSRNOG00000008978	Trmt12	94	48.317	ENSPLAG00000020621	trmt12	96	48.317	Poecilia_latipinna
ENSRNOG00000008978	Trmt12	94	49.757	ENSPMEG00000000818	trmt12	96	49.757	Poecilia_mexicana
ENSRNOG00000008978	Trmt12	94	48.426	ENSPREG00000011621	trmt12	96	49.029	Poecilia_reticulata
ENSRNOG00000008978	Trmt12	100	82.688	ENSPPYG00000018866	TRMT12	98	82.688	Pongo_abelii
ENSRNOG00000008978	Trmt12	99	80.275	ENSPCAG00000000556	TRMT12	98	80.275	Procavia_capensis
ENSRNOG00000008978	Trmt12	100	79.954	ENSPVAG00000009149	TRMT12	99	79.954	Pteropus_vampyrus
ENSRNOG00000008978	Trmt12	93	50.985	ENSPNYG00000010696	trmt12	99	50.985	Pundamilia_nyererei
ENSRNOG00000008978	Trmt12	97	51.515	ENSPNAG00000019028	trmt12	99	51.515	Pygocentrus_nattereri
ENSRNOG00000008978	Trmt12	97	68.160	ENSSHAG00000003345	TRMT12	94	68.160	Sarcophilus_harrisii
ENSRNOG00000008978	Trmt12	97	53.037	ENSSFOG00015006090	trmt12	99	53.037	Scleropages_formosus
ENSRNOG00000008978	Trmt12	94	50.000	ENSSMAG00000013247	trmt12	96	50.000	Scophthalmus_maximus
ENSRNOG00000008978	Trmt12	93	51.232	ENSSDUG00000006168	trmt12	96	51.232	Seriola_dumerili
ENSRNOG00000008978	Trmt12	94	50.485	ENSSLDG00000025007	trmt12	96	50.485	Seriola_lalandi_dorsalis
ENSRNOG00000008978	Trmt12	97	59.361	ENSSPUG00000005321	TRMT12	96	59.361	Sphenodon_punctatus
ENSRNOG00000008978	Trmt12	94	50.363	ENSSPAG00000009435	trmt12	93	50.363	Stegastes_partitus
ENSRNOG00000008978	Trmt12	97	54.988	ENSTGUG00000002280	TRMT12	99	57.277	Taeniopygia_guttata
ENSRNOG00000008978	Trmt12	98	48.260	ENSTRUG00000011548	trmt12	95	47.952	Takifugu_rubripes
ENSRNOG00000008978	Trmt12	99	47.696	ENSTNIG00000016866	trmt12	100	47.696	Tetraodon_nigroviridis
ENSRNOG00000008978	Trmt12	99	82.488	ENSUAMG00000002067	TRMT12	99	82.488	Ursus_americanus
ENSRNOG00000008978	Trmt12	100	82.005	ENSVPAG00000006519	TRMT12	99	82.005	Vicugna_pacos
ENSRNOG00000008978	Trmt12	100	79.452	ENSVVUG00000016790	TRMT12	98	79.452	Vulpes_vulpes
ENSRNOG00000008978	Trmt12	98	58.508	ENSXETG00000009641	trmt12	96	58.508	Xenopus_tropicalis
ENSRNOG00000008978	Trmt12	95	49.519	ENSXCOG00000016505	trmt12	97	49.519	Xiphophorus_couchianus
ENSRNOG00000008978	Trmt12	94	49.395	ENSXMAG00000025318	trmt12	96	49.395	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0008175	tRNA methyltransferase activity	21873635.	IBA	Function
GO:0030488	tRNA methylation	21873635.	IBA	Process
GO:0031591	wybutosine biosynthetic process	21873635.	IBA	Process
GO:0102522	tRNA 4-demethylwyosine alpha-amino-alpha-carboxypropyltransferase activity	-	IEA	Function