EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000009034 (Gene tree)
Gene ID: 306066
Gene Symbol: Tdrd3
Alias: LOC306066
Full Name: tudor domain containing 3
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 69061 bases
Position: chr15:70790125-70859185
Accession: 1310126
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000012440	TUDOR	PF00567.24	9.3e-09	1	1
ENSRNOP00000012440	SMN	PF06003.12	3.7e-09	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000012440	-	1899	-	ENSRNOP00000012440	632 (aa)	-	A0A096MIS7

Gene Model

Click here to download ENSRNOG00000009034's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000009034's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000009034	Tdrd3	100	84.178	ENSG00000083544	TDRD3	100	88.372	Homo_sapiens
ENSRNOG00000009034	Tdrd3	100	46.827	ENSAPOG00000016078	tdrd3	88	46.968	Acanthochromis_polyacanthus
ENSRNOG00000009034	Tdrd3	100	82.848	ENSAMEG00000000082	TDRD3	88	82.848	Ailuropoda_melanoleuca
ENSRNOG00000009034	Tdrd3	100	47.450	ENSACIG00000023900	tdrd3	88	46.742	Amphilophus_citrinellus
ENSRNOG00000009034	Tdrd3	100	46.853	ENSAOCG00000001410	tdrd3	88	46.573	Amphiprion_ocellaris
ENSRNOG00000009034	Tdrd3	100	46.921	ENSAPEG00000022810	tdrd3	89	46.628	Amphiprion_percula
ENSRNOG00000009034	Tdrd3	100	47.017	ENSATEG00000014570	tdrd3	88	46.742	Anabas_testudineus
ENSRNOG00000009034	Tdrd3	100	70.399	ENSAPLG00000014316	TDRD3	96	69.785	Anas_platyrhynchos
ENSRNOG00000009034	Tdrd3	100	66.258	ENSACAG00000004923	TDRD3	87	65.644	Anolis_carolinensis
ENSRNOG00000009034	Tdrd3	100	82.335	ENSANAG00000030827	-	87	82.335	Aotus_nancymaae
ENSRNOG00000009034	Tdrd3	95	70.451	ENSANAG00000027927	-	98	70.451	Aotus_nancymaae
ENSRNOG00000009034	Tdrd3	51	57.265	ENSACLG00000022962	tdrd3	88	45.519	Astatotilapia_calliptera
ENSRNOG00000009034	Tdrd3	100	47.183	ENSAMXG00000006847	tdrd3	88	46.685	Astyanax_mexicanus
ENSRNOG00000009034	Tdrd3	100	81.567	ENSBTAG00000009308	TDRD3	100	81.567	Bos_taurus
ENSRNOG00000009034	Tdrd3	100	83.564	ENSCJAG00000003853	TDRD3	88	83.564	Callithrix_jacchus
ENSRNOG00000009034	Tdrd3	100	81.804	ENSCAFG00000023746	-	88	81.804	Canis_familiaris
ENSRNOG00000009034	Tdrd3	100	82.949	ENSCAFG00020018076	-	88	82.949	Canis_lupus_dingo
ENSRNOG00000009034	Tdrd3	75	75.556	ENSCAFG00020015271	-	95	75.896	Canis_lupus_dingo
ENSRNOG00000009034	Tdrd3	100	81.260	ENSCHIG00000020019	TDRD3	100	81.260	Capra_hircus
ENSRNOG00000009034	Tdrd3	100	83.775	ENSTSYG00000002254	TDRD3	90	83.775	Carlito_syrichta
ENSRNOG00000009034	Tdrd3	100	71.275	ENSCAPG00000012313	TDRD3	90	71.275	Cavia_aperea
ENSRNOG00000009034	Tdrd3	100	75.269	ENSCPOG00000010437	TDRD3	87	75.269	Cavia_porcellus
ENSRNOG00000009034	Tdrd3	100	84.332	ENSCCAG00000023831	TDRD3	88	84.332	Cebus_capucinus
ENSRNOG00000009034	Tdrd3	100	83.564	ENSCATG00000029498	TDRD3	100	83.564	Cercocebus_atys
ENSRNOG00000009034	Tdrd3	100	82.488	ENSCLAG00000002654	TDRD3	89	82.488	Chinchilla_lanigera
ENSRNOG00000009034	Tdrd3	100	83.564	ENSCSAG00000017640	TDRD3	88	83.564	Chlorocebus_sabaeus
ENSRNOG00000009034	Tdrd3	84	86.760	ENSCHOG00000012825	TDRD3	86	86.760	Choloepus_hoffmanni
ENSRNOG00000009034	Tdrd3	100	70.904	ENSCPBG00000026646	TDRD3	90	70.444	Chrysemys_picta_bellii
ENSRNOG00000009034	Tdrd3	100	83.410	ENSCANG00000034303	TDRD3	100	83.257	Colobus_angolensis_palliatus
ENSRNOG00000009034	Tdrd3	100	86.656	ENSCGRG00001011297	Tdrd3	89	86.656	Cricetulus_griseus_chok1gshd
ENSRNOG00000009034	Tdrd3	100	86.656	ENSCGRG00000015535	-	100	86.656	Cricetulus_griseus_crigri
ENSRNOG00000009034	Tdrd3	100	46.055	ENSCSEG00000000670	tdrd3	88	45.677	Cynoglossus_semilaevis
ENSRNOG00000009034	Tdrd3	100	46.131	ENSCVAG00000015641	tdrd3	93	45.974	Cyprinodon_variegatus
ENSRNOG00000009034	Tdrd3	100	47.337	ENSDARG00000025421	tdrd3	87	47.024	Danio_rerio
ENSRNOG00000009034	Tdrd3	100	80.338	ENSDNOG00000002011	TDRD3	87	80.338	Dasypus_novemcinctus
ENSRNOG00000009034	Tdrd3	100	82.181	ENSDORG00000008714	Tdrd3	88	82.181	Dipodomys_ordii
ENSRNOG00000009034	Tdrd3	94	36.308	ENSEBUG00000011812	tdrd3	79	36.107	Eptatretus_burgeri
ENSRNOG00000009034	Tdrd3	100	82.796	ENSEASG00005015575	TDRD3	90	82.796	Equus_asinus_asinus
ENSRNOG00000009034	Tdrd3	100	82.796	ENSECAG00000000550	TDRD3	95	82.796	Equus_caballus
ENSRNOG00000009034	Tdrd3	100	73.118	ENSEEUG00000002192	TDRD3	100	73.118	Erinaceus_europaeus
ENSRNOG00000009034	Tdrd3	100	82.949	ENSFCAG00000022126	TDRD3	88	82.949	Felis_catus
ENSRNOG00000009034	Tdrd3	100	68.712	ENSFALG00000007927	TDRD3	87	68.252	Ficedula_albicollis
ENSRNOG00000009034	Tdrd3	100	82.181	ENSFDAG00000011552	TDRD3	89	82.181	Fukomys_damarensis
ENSRNOG00000009034	Tdrd3	100	46.165	ENSFHEG00000009513	tdrd3	88	46.449	Fundulus_heteroclitus
ENSRNOG00000009034	Tdrd3	66	62.500	ENSGMOG00000005733	tdrd3	74	57.402	Gadus_morhua
ENSRNOG00000009034	Tdrd3	100	69.939	ENSGALG00000016936	TDRD3	87	69.325	Gallus_gallus
ENSRNOG00000009034	Tdrd3	100	69.985	ENSGAGG00000003173	TDRD3	88	69.985	Gopherus_agassizii
ENSRNOG00000009034	Tdrd3	100	83.871	ENSGGOG00000025560	TDRD3	100	82.739	Gorilla_gorilla
ENSRNOG00000009034	Tdrd3	51	57.265	ENSHBUG00000007081	tdrd3	88	45.519	Haplochromis_burtoni
ENSRNOG00000009034	Tdrd3	100	78.199	ENSHGLG00000014119	-	100	78.199	Heterocephalus_glaber_female
ENSRNOG00000009034	Tdrd3	99	74.308	ENSHGLG00000009668	-	99	74.000	Heterocephalus_glaber_female
ENSRNOG00000009034	Tdrd3	100	68.664	ENSHGLG00000010652	-	89	68.664	Heterocephalus_glaber_female
ENSRNOG00000009034	Tdrd3	100	82.923	ENSHGLG00000018707	-	87	82.923	Heterocephalus_glaber_female
ENSRNOG00000009034	Tdrd3	87	86.014	ENSHGLG00100017738	-	100	86.014	Heterocephalus_glaber_male
ENSRNOG00000009034	Tdrd3	100	82.769	ENSHGLG00100010966	-	89	82.769	Heterocephalus_glaber_male
ENSRNOG00000009034	Tdrd3	100	43.504	ENSHCOG00000002157	tdrd3	88	43.446	Hippocampus_comes
ENSRNOG00000009034	Tdrd3	100	82.949	ENSSTOG00000028945	-	89	82.949	Ictidomys_tridecemlineatus
ENSRNOG00000009034	Tdrd3	100	82.515	ENSJJAG00000023665	Tdrd3	89	82.515	Jaculus_jaculus
ENSRNOG00000009034	Tdrd3	100	46.434	ENSKMAG00000021849	tdrd3	88	46.294	Kryptolebias_marmoratus
ENSRNOG00000009034	Tdrd3	93	45.303	ENSLBEG00000011777	tdrd3	87	45.783	Labrus_bergylta
ENSRNOG00000009034	Tdrd3	99	57.815	ENSLACG00000001412	TDRD3	94	57.815	Latimeria_chalumnae
ENSRNOG00000009034	Tdrd3	100	53.707	ENSLOCG00000004652	tdrd3	88	53.625	Lepisosteus_oculatus
ENSRNOG00000009034	Tdrd3	77	78.669	ENSLAFG00000002705	TDRD3	100	80.237	Loxodonta_africana
ENSRNOG00000009034	Tdrd3	100	84.025	ENSMFAG00000007606	TDRD3	88	84.025	Macaca_fascicularis
ENSRNOG00000009034	Tdrd3	100	84.025	ENSMMUG00000007169	TDRD3	100	82.927	Macaca_mulatta
ENSRNOG00000009034	Tdrd3	100	83.717	ENSMNEG00000002038	TDRD3	100	83.717	Macaca_nemestrina
ENSRNOG00000009034	Tdrd3	61	81.728	ENSMLEG00000039737	TDRD3	98	81.566	Mandrillus_leucophaeus
ENSRNOG00000009034	Tdrd3	51	57.265	ENSMZEG00005004551	tdrd3	88	45.519	Maylandia_zebra
ENSRNOG00000009034	Tdrd3	100	69.939	ENSMGAG00000014961	TDRD3	88	69.325	Meleagris_gallopavo
ENSRNOG00000009034	Tdrd3	100	88.497	ENSMAUG00000012562	Tdrd3	88	88.497	Mesocricetus_auratus
ENSRNOG00000009034	Tdrd3	100	83.564	ENSMICG00000009982	TDRD3	100	83.564	Microcebus_murinus
ENSRNOG00000009034	Tdrd3	100	88.326	ENSMOCG00000012962	Tdrd3	88	88.326	Microtus_ochrogaster
ENSRNOG00000009034	Tdrd3	94	63.871	ENSMODG00000006316	TDRD3	100	63.871	Monodelphis_domestica
ENSRNOG00000009034	Tdrd3	100	47.795	ENSMALG00000015327	tdrd3	91	47.009	Monopterus_albus
ENSRNOG00000009034	Tdrd3	100	91.551	MGP_CAROLIEiJ_G0019551	Tdrd3	88	91.551	Mus_caroli
ENSRNOG00000009034	Tdrd3	100	89.862	ENSMUSG00000022019	Tdrd3	88	89.862	Mus_musculus
ENSRNOG00000009034	Tdrd3	100	91.551	MGP_PahariEiJ_G0030569	Tdrd3	88	91.551	Mus_pahari
ENSRNOG00000009034	Tdrd3	100	90.783	MGP_SPRETEiJ_G0020448	Tdrd3	88	90.783	Mus_spretus
ENSRNOG00000009034	Tdrd3	97	80.763	ENSMPUG00000009630	TDRD3	91	80.763	Mustela_putorius_furo
ENSRNOG00000009034	Tdrd3	94	81.729	ENSMLUG00000000235	TDRD3	89	81.729	Myotis_lucifugus
ENSRNOG00000009034	Tdrd3	100	85.407	ENSNGAG00000004523	Tdrd3	87	85.407	Nannospalax_galili
ENSRNOG00000009034	Tdrd3	100	83.564	ENSNLEG00000015920	TDRD3	100	83.410	Nomascus_leucogenys
ENSRNOG00000009034	Tdrd3	100	64.417	ENSMEUG00000010114	TDRD3	100	64.417	Notamacropus_eugenii
ENSRNOG00000009034	Tdrd3	100	74.347	ENSOPRG00000007868	TDRD3	100	74.347	Ochotona_princeps
ENSRNOG00000009034	Tdrd3	100	80.952	ENSODEG00000000576	-	87	80.952	Octodon_degus
ENSRNOG00000009034	Tdrd3	100	71.044	ENSODEG00000014559	-	88	71.044	Octodon_degus
ENSRNOG00000009034	Tdrd3	51	57.835	ENSONIG00000003233	tdrd3	88	45.852	Oreochromis_niloticus
ENSRNOG00000009034	Tdrd3	57	65.000	ENSOANG00000011775	-	100	64.737	Ornithorhynchus_anatinus
ENSRNOG00000009034	Tdrd3	100	83.564	ENSOCUG00000014261	TDRD3	87	83.564	Oryctolagus_cuniculus
ENSRNOG00000009034	Tdrd3	100	46.790	ENSORLG00000004502	tdrd3	88	46.296	Oryzias_latipes
ENSRNOG00000009034	Tdrd3	100	45.101	ENSORLG00020017271	tdrd3	89	45.259	Oryzias_latipes_hni
ENSRNOG00000009034	Tdrd3	100	47.076	ENSORLG00015015519	tdrd3	88	46.154	Oryzias_latipes_hsok
ENSRNOG00000009034	Tdrd3	100	46.933	ENSOMEG00000015668	tdrd3	88	47.293	Oryzias_melastigma
ENSRNOG00000009034	Tdrd3	100	82.488	ENSOGAG00000005898	TDRD3	88	82.488	Otolemur_garnettii
ENSRNOG00000009034	Tdrd3	100	81.567	ENSOARG00000006244	TDRD3	88	81.567	Ovis_aries
ENSRNOG00000009034	Tdrd3	100	83.717	ENSPPAG00000010477	TDRD3	88	83.717	Pan_paniscus
ENSRNOG00000009034	Tdrd3	100	82.642	ENSPPRG00000008512	TDRD3	89	82.642	Panthera_pardus
ENSRNOG00000009034	Tdrd3	100	82.642	ENSPTIG00000002537	TDRD3	89	82.642	Panthera_tigris_altaica
ENSRNOG00000009034	Tdrd3	100	83.717	ENSPTRG00000005918	TDRD3	90	83.717	Pan_troglodytes
ENSRNOG00000009034	Tdrd3	100	83.410	ENSPANG00000019138	TDRD3	88	83.410	Papio_anubis
ENSRNOG00000009034	Tdrd3	100	46.037	ENSPKIG00000008894	tdrd3	87	44.885	Paramormyrops_kingsleyae
ENSRNOG00000009034	Tdrd3	100	69.678	ENSPSIG00000013821	TDRD3	100	69.678	Pelodiscus_sinensis
ENSRNOG00000009034	Tdrd3	100	46.131	ENSPMGG00000015263	tdrd3	87	44.985	Periophthalmus_magnuspinnatus
ENSRNOG00000009034	Tdrd3	100	88.786	ENSPEMG00000004287	Tdrd3	88	88.786	Peromyscus_maniculatus_bairdii
ENSRNOG00000009034	Tdrd3	100	75.498	ENSPCIG00000011476	-	90	74.309	Phascolarctos_cinereus
ENSRNOG00000009034	Tdrd3	100	45.876	ENSPFOG00000012450	tdrd3	88	45.455	Poecilia_formosa
ENSRNOG00000009034	Tdrd3	100	45.106	ENSPLAG00000016397	tdrd3	93	44.979	Poecilia_latipinna
ENSRNOG00000009034	Tdrd3	100	45.532	ENSPMEG00000019048	tdrd3	95	44.979	Poecilia_mexicana
ENSRNOG00000009034	Tdrd3	100	84.025	ENSPPYG00000005401	TDRD3	88	84.025	Pongo_abelii
ENSRNOG00000009034	Tdrd3	100	74.194	ENSPCAG00000014959	TDRD3	100	73.579	Procavia_capensis
ENSRNOG00000009034	Tdrd3	85	88.542	ENSPCOG00000019937	TDRD3	100	88.542	Propithecus_coquereli
ENSRNOG00000009034	Tdrd3	100	82.181	ENSPVAG00000010549	TDRD3	100	82.181	Pteropus_vampyrus
ENSRNOG00000009034	Tdrd3	51	57.265	ENSPNYG00000001569	tdrd3	88	45.377	Pundamilia_nyererei
ENSRNOG00000009034	Tdrd3	100	46.944	ENSPNAG00000026219	tdrd3	88	45.467	Pygocentrus_nattereri
ENSRNOG00000009034	Tdrd3	100	80.982	ENSRBIG00000031218	TDRD3	88	80.982	Rhinopithecus_bieti
ENSRNOG00000009034	Tdrd3	100	83.410	ENSRROG00000044516	TDRD3	100	83.410	Rhinopithecus_roxellana
ENSRNOG00000009034	Tdrd3	100	84.178	ENSSBOG00000022790	TDRD3	97	83.524	Saimiri_boliviensis_boliviensis
ENSRNOG00000009034	Tdrd3	100	72.214	ENSSHAG00000011994	TDRD3	89	72.214	Sarcophilus_harrisii
ENSRNOG00000009034	Tdrd3	100	43.917	ENSSFOG00015005175	tdrd3	84	42.667	Scleropages_formosus
ENSRNOG00000009034	Tdrd3	94	43.478	ENSSMAG00000011677	tdrd3	88	43.862	Scophthalmus_maximus
ENSRNOG00000009034	Tdrd3	100	47.218	ENSSDUG00000004594	tdrd3	88	46.848	Seriola_dumerili
ENSRNOG00000009034	Tdrd3	100	44.411	ENSSLDG00000002918	tdrd3	88	43.064	Seriola_lalandi_dorsalis
ENSRNOG00000009034	Tdrd3	100	80.184	ENSSARG00000003028	TDRD3	100	79.877	Sorex_araneus
ENSRNOG00000009034	Tdrd3	100	70.031	ENSSPUG00000001191	TDRD3	87	69.878	Sphenodon_punctatus
ENSRNOG00000009034	Tdrd3	100	47.539	ENSSPAG00000005342	tdrd3	88	47.257	Stegastes_partitus
ENSRNOG00000009034	Tdrd3	100	82.209	ENSSSCG00000009449	TDRD3	90	82.209	Sus_scrofa
ENSRNOG00000009034	Tdrd3	100	69.832	ENSTGUG00000012476	-	87	69.372	Taeniopygia_guttata
ENSRNOG00000009034	Tdrd3	94	44.055	ENSTRUG00000017194	tdrd3	83	44.055	Takifugu_rubripes
ENSRNOG00000009034	Tdrd3	100	47.598	ENSTNIG00000005230	tdrd3	88	46.997	Tetraodon_nigroviridis
ENSRNOG00000009034	Tdrd3	99	76.615	ENSTTRG00000010071	TDRD3	99	76.615	Tursiops_truncatus
ENSRNOG00000009034	Tdrd3	100	83.717	ENSUAMG00000017369	-	93	83.717	Ursus_americanus
ENSRNOG00000009034	Tdrd3	100	86.076	ENSUMAG00000014526	TDRD3	100	86.076	Ursus_maritimus
ENSRNOG00000009034	Tdrd3	100	83.257	ENSVPAG00000011763	TDRD3	100	83.257	Vicugna_pacos
ENSRNOG00000009034	Tdrd3	100	82.949	ENSVVUG00000029140	TDRD3	86	82.219	Vulpes_vulpes
ENSRNOG00000009034	Tdrd3	100	46.369	ENSXCOG00000001875	tdrd3	87	46.154	Xiphophorus_couchianus
ENSRNOG00000009034	Tdrd3	100	46.176	ENSXMAG00000005103	tdrd3	88	46.241	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0003682	chromatin binding	-	IEA	Function
GO:0003682	chromatin binding	-	ISO	Function
GO:0003682	chromatin binding	-	ISS	Function
GO:0003713	transcription coactivator activity	-	IEA	Function
GO:0003713	transcription coactivator activity	-	ISO	Function
GO:0003713	transcription coactivator activity	-	ISS	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005634	nucleus	-	ISS	Component
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005794	Golgi apparatus	-	IEA	Component
GO:0005794	Golgi apparatus	-	ISO	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006325	chromatin organization	-	IEA	Process
GO:0006397	mRNA processing	-	IEA	Process
GO:0008150	biological_process	-	ND	Process
GO:0035064	methylated histone binding	-	IEA	Function
GO:0035064	methylated histone binding	-	ISO	Function
GO:0035064	methylated histone binding	-	ISS	Function
GO:0035145	exon-exon junction complex	-	IEA	Component
GO:0035145	exon-exon junction complex	-	ISO	Component
GO:0035145	exon-exon junction complex	-	ISS	Component
GO:1903508	positive regulation of nucleic acid-templated transcription	-	IEA	Process