EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000009192 (Gene tree)
Gene ID: 361056
Gene Symbol: Rnaseh2b
Alias: MGC94780
Full Name: ribonuclease H2%2C subunit B
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 42883 bases
Position: chr15:45422010-45464892
Accession: 1359710
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000012231	RNase_H2-Ydr279	PF09468.10	3.4e-16	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000012231	-	1420	XM_008770762	ENSRNOP00000012231	307 (aa)	XP_008768984	Q5XI96

Gene Model

Click here to download ENSRNOG00000009192's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000009192's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000009192	Rnaseh2b	100	81.230	ENSG00000136104	RNASEH2B	99	86.364	Homo_sapiens
ENSRNOG00000009192	Rnaseh2b	90	51.264	ENSAPOG00000010496	rnaseh2b	90	51.264	Acanthochromis_polyacanthus
ENSRNOG00000009192	Rnaseh2b	93	81.034	ENSAMEG00000012040	RNASEH2B	99	80.205	Ailuropoda_melanoleuca
ENSRNOG00000009192	Rnaseh2b	82	48.617	ENSACIG00000021991	rnaseh2b	95	48.469	Amphilophus_citrinellus
ENSRNOG00000009192	Rnaseh2b	90	50.542	ENSAOCG00000013398	rnaseh2b	90	50.542	Amphiprion_ocellaris
ENSRNOG00000009192	Rnaseh2b	90	50.181	ENSAPEG00000006033	rnaseh2b	90	50.181	Amphiprion_percula
ENSRNOG00000009192	Rnaseh2b	87	53.704	ENSATEG00000008370	rnaseh2b	87	53.704	Anabas_testudineus
ENSRNOG00000009192	Rnaseh2b	83	62.646	ENSAPLG00000008955	RNASEH2B	99	61.993	Anas_platyrhynchos
ENSRNOG00000009192	Rnaseh2b	93	56.250	ENSACAG00000011679	RNASEH2B	97	56.250	Anolis_carolinensis
ENSRNOG00000009192	Rnaseh2b	100	81.230	ENSANAG00000020662	RNASEH2B	100	81.230	Aotus_nancymaae
ENSRNOG00000009192	Rnaseh2b	87	51.301	ENSACLG00000000467	rnaseh2b	88	51.301	Astatotilapia_calliptera
ENSRNOG00000009192	Rnaseh2b	87	53.731	ENSAMXG00000014351	rnaseh2b	87	53.731	Astyanax_mexicanus
ENSRNOG00000009192	Rnaseh2b	99	78.827	ENSBTAG00000020149	RNASEH2B	99	78.827	Bos_taurus
ENSRNOG00000009192	Rnaseh2b	98	81.395	ENSCJAG00000008585	-	99	81.395	Callithrix_jacchus
ENSRNOG00000009192	Rnaseh2b	80	77.733	ENSCJAG00000003822	-	92	77.733	Callithrix_jacchus
ENSRNOG00000009192	Rnaseh2b	98	75.828	ENSCAFG00000004295	RNASEH2B	99	75.828	Canis_familiaris
ENSRNOG00000009192	Rnaseh2b	97	79.264	ENSCAFG00020000250	RNASEH2B	98	79.264	Canis_lupus_dingo
ENSRNOG00000009192	Rnaseh2b	99	81.250	ENSCHIG00000018220	RNASEH2B	99	81.250	Capra_hircus
ENSRNOG00000009192	Rnaseh2b	77	71.308	ENSCHIG00000012982	-	84	71.308	Capra_hircus
ENSRNOG00000009192	Rnaseh2b	93	81.882	ENSTSYG00000009176	-	93	81.882	Carlito_syrichta
ENSRNOG00000009192	Rnaseh2b	96	69.024	ENSTSYG00000031177	-	98	69.024	Carlito_syrichta
ENSRNOG00000009192	Rnaseh2b	92	72.438	ENSCAPG00000009978	RNASEH2B	95	72.887	Cavia_aperea
ENSRNOG00000009192	Rnaseh2b	95	80.272	ENSCPOG00000032527	RNASEH2B	97	79.538	Cavia_porcellus
ENSRNOG00000009192	Rnaseh2b	99	81.579	ENSCCAG00000026979	RNASEH2B	99	81.395	Cebus_capucinus
ENSRNOG00000009192	Rnaseh2b	95	81.911	ENSCATG00000031336	RNASEH2B	83	81.911	Cercocebus_atys
ENSRNOG00000009192	Rnaseh2b	93	83.624	ENSCLAG00000003517	RNASEH2B	79	83.624	Chinchilla_lanigera
ENSRNOG00000009192	Rnaseh2b	97	80.731	ENSCSAG00000017701	RNASEH2B	91	80.731	Chlorocebus_sabaeus
ENSRNOG00000009192	Rnaseh2b	99	66.993	ENSCHOG00000013688	RNASEH2B	99	66.993	Choloepus_hoffmanni
ENSRNOG00000009192	Rnaseh2b	99	59.211	ENSCPBG00000008684	RNASEH2B	94	59.211	Chrysemys_picta_bellii
ENSRNOG00000009192	Rnaseh2b	94	37.829	ENSCING00000016454	-	95	37.829	Ciona_intestinalis
ENSRNOG00000009192	Rnaseh2b	100	81.090	ENSCANG00000041511	-	100	81.090	Colobus_angolensis_palliatus
ENSRNOG00000009192	Rnaseh2b	100	91.531	ENSCGRG00001000611	Rnaseh2b	100	91.531	Cricetulus_griseus_chok1gshd
ENSRNOG00000009192	Rnaseh2b	100	91.531	ENSCGRG00000006077	Rnaseh2b	100	91.531	Cricetulus_griseus_crigri
ENSRNOG00000009192	Rnaseh2b	88	51.825	ENSCSEG00000004910	rnaseh2b	93	51.128	Cynoglossus_semilaevis
ENSRNOG00000009192	Rnaseh2b	90	49.821	ENSCVAG00000005212	rnaseh2b	90	49.821	Cyprinodon_variegatus
ENSRNOG00000009192	Rnaseh2b	94	51.203	ENSDARG00000005128	rnaseh2b	94	51.203	Danio_rerio
ENSRNOG00000009192	Rnaseh2b	92	72.792	ENSDNOG00000049666	-	92	72.792	Dasypus_novemcinctus
ENSRNOG00000009192	Rnaseh2b	99	72.697	ENSDNOG00000034290	-	99	72.697	Dasypus_novemcinctus
ENSRNOG00000009192	Rnaseh2b	100	81.230	ENSDORG00000010708	Rnaseh2b	100	81.230	Dipodomys_ordii
ENSRNOG00000009192	Rnaseh2b	83	38.372	ENSEBUG00000005965	rnaseh2b	98	39.147	Eptatretus_burgeri
ENSRNOG00000009192	Rnaseh2b	100	83.172	ENSEASG00005017323	RNASEH2B	100	83.172	Equus_asinus_asinus
ENSRNOG00000009192	Rnaseh2b	100	83.172	ENSECAG00000014262	RNASEH2B	100	83.172	Equus_caballus
ENSRNOG00000009192	Rnaseh2b	94	48.973	ENSELUG00000019560	rnaseh2b	91	50.534	Esox_lucius
ENSRNOG00000009192	Rnaseh2b	93	80.556	ENSFCAG00000014257	RNASEH2B	90	80.556	Felis_catus
ENSRNOG00000009192	Rnaseh2b	91	58.719	ENSFALG00000008435	RNASEH2B	96	58.719	Ficedula_albicollis
ENSRNOG00000009192	Rnaseh2b	92	80.851	ENSFDAG00000009920	RNASEH2B	98	80.851	Fukomys_damarensis
ENSRNOG00000009192	Rnaseh2b	87	52.612	ENSFHEG00000012160	rnaseh2b	87	52.612	Fundulus_heteroclitus
ENSRNOG00000009192	Rnaseh2b	83	49.430	ENSGMOG00000016830	rnaseh2b	91	49.430	Gadus_morhua
ENSRNOG00000009192	Rnaseh2b	94	58.362	ENSGALG00000017015	RNASEH2B	99	57.980	Gallus_gallus
ENSRNOG00000009192	Rnaseh2b	87	53.731	ENSGAFG00000021222	rnaseh2b	87	53.731	Gambusia_affinis
ENSRNOG00000009192	Rnaseh2b	90	50.175	ENSGACG00000002821	rnaseh2b	90	50.175	Gasterosteus_aculeatus
ENSRNOG00000009192	Rnaseh2b	89	62.637	ENSGAGG00000014722	RNASEH2B	98	62.637	Gopherus_agassizii
ENSRNOG00000009192	Rnaseh2b	100	81.410	ENSGGOG00000001044	RNASEH2B	100	81.410	Gorilla_gorilla
ENSRNOG00000009192	Rnaseh2b	87	51.673	ENSHBUG00000006049	rnaseh2b	93	51.311	Haplochromis_burtoni
ENSRNOG00000009192	Rnaseh2b	92	82.686	ENSHGLG00100015953	RNASEH2B	97	82.686	Heterocephalus_glaber_male
ENSRNOG00000009192	Rnaseh2b	87	50.000	ENSHCOG00000003318	rnaseh2b	86	53.469	Hippocampus_comes
ENSRNOG00000009192	Rnaseh2b	87	52.399	ENSIPUG00000023815	rnaseh2b	87	52.399	Ictalurus_punctatus
ENSRNOG00000009192	Rnaseh2b	93	82.927	ENSSTOG00000015126	RNASEH2B	98	82.927	Ictidomys_tridecemlineatus
ENSRNOG00000009192	Rnaseh2b	94	81.661	ENSJJAG00000013335	Rnaseh2b	98	81.661	Jaculus_jaculus
ENSRNOG00000009192	Rnaseh2b	90	51.613	ENSKMAG00000002198	rnaseh2b	90	51.613	Kryptolebias_marmoratus
ENSRNOG00000009192	Rnaseh2b	91	53.025	ENSLBEG00000019331	rnaseh2b	92	53.025	Labrus_bergylta
ENSRNOG00000009192	Rnaseh2b	73	59.471	ENSLACG00000010782	RNASEH2B	91	59.471	Latimeria_chalumnae
ENSRNOG00000009192	Rnaseh2b	98	53.268	ENSLOCG00000009296	rnaseh2b	99	53.268	Lepisosteus_oculatus
ENSRNOG00000009192	Rnaseh2b	95	77.551	ENSLAFG00000030158	RNASEH2B	97	75.748	Loxodonta_africana
ENSRNOG00000009192	Rnaseh2b	100	81.553	ENSMFAG00000038464	-	100	81.553	Macaca_fascicularis
ENSRNOG00000009192	Rnaseh2b	100	73.786	ENSMMUG00000021746	RNASEH2B	96	80.328	Macaca_mulatta
ENSRNOG00000009192	Rnaseh2b	100	81.553	ENSMNEG00000030580	RNASEH2B	100	81.553	Macaca_nemestrina
ENSRNOG00000009192	Rnaseh2b	100	80.769	ENSMLEG00000043911	-	100	80.769	Mandrillus_leucophaeus
ENSRNOG00000009192	Rnaseh2b	87	51.866	ENSMAMG00000017109	rnaseh2b	87	51.866	Mastacembelus_armatus
ENSRNOG00000009192	Rnaseh2b	85	51.331	ENSMZEG00005021926	rnaseh2b	87	50.943	Maylandia_zebra
ENSRNOG00000009192	Rnaseh2b	88	58.824	ENSMGAG00000015025	RNASEH2B	99	58.803	Meleagris_gallopavo
ENSRNOG00000009192	Rnaseh2b	100	87.948	ENSMAUG00000016520	Rnaseh2b	100	87.948	Mesocricetus_auratus
ENSRNOG00000009192	Rnaseh2b	100	84.416	ENSMICG00000000528	RNASEH2B	100	84.416	Microcebus_murinus
ENSRNOG00000009192	Rnaseh2b	87	52.222	ENSMMOG00000019799	rnaseh2b	93	52.222	Mola_mola
ENSRNOG00000009192	Rnaseh2b	99	59.016	ENSMODG00000010775	RNASEH2B	99	59.016	Monodelphis_domestica
ENSRNOG00000009192	Rnaseh2b	90	49.819	ENSMALG00000004463	rnaseh2b	90	49.819	Monopterus_albus
ENSRNOG00000009192	Rnaseh2b	100	80.844	MGP_CAROLIEiJ_G0019389	Rnaseh2b	100	81.169	Mus_caroli
ENSRNOG00000009192	Rnaseh2b	100	93.506	ENSMUSG00000021932	Rnaseh2b	100	93.831	Mus_musculus
ENSRNOG00000009192	Rnaseh2b	100	68.000	MGP_PahariEiJ_G0030407	-	100	68.000	Mus_pahari
ENSRNOG00000009192	Rnaseh2b	73	80.269	ENSMPUG00000018010	RNASEH2B	94	80.269	Mustela_putorius_furo
ENSRNOG00000009192	Rnaseh2b	99	82.566	ENSMLUG00000004065	-	98	82.566	Myotis_lucifugus
ENSRNOG00000009192	Rnaseh2b	88	51.838	ENSNBRG00000003253	rnaseh2b	89	51.838	Neolamprologus_brichardi
ENSRNOG00000009192	Rnaseh2b	100	80.769	ENSNLEG00000003804	RNASEH2B	100	80.769	Nomascus_leucogenys
ENSRNOG00000009192	Rnaseh2b	93	61.672	ENSMEUG00000003665	RNASEH2B	99	61.672	Notamacropus_eugenii
ENSRNOG00000009192	Rnaseh2b	51	82.911	ENSOPRG00000003695	-	78	62.753	Ochotona_princeps
ENSRNOG00000009192	Rnaseh2b	78	71.849	ENSODEG00000005412	-	94	71.849	Octodon_degus
ENSRNOG00000009192	Rnaseh2b	99	79.868	ENSODEG00000006793	-	98	79.868	Octodon_degus
ENSRNOG00000009192	Rnaseh2b	87	49.817	ENSONIG00000006657	rnaseh2b	88	50.929	Oreochromis_niloticus
ENSRNOG00000009192	Rnaseh2b	91	62.937	ENSOANG00000015537	RNASEH2B	99	62.937	Ornithorhynchus_anatinus
ENSRNOG00000009192	Rnaseh2b	99	79.276	ENSOCUG00000008904	RNASEH2B	96	79.276	Oryctolagus_cuniculus
ENSRNOG00000009192	Rnaseh2b	93	51.042	ENSORLG00000011850	rnaseh2b	95	51.042	Oryzias_latipes
ENSRNOG00000009192	Rnaseh2b	93	51.736	ENSORLG00020012081	rnaseh2b	95	51.736	Oryzias_latipes_hni
ENSRNOG00000009192	Rnaseh2b	93	51.736	ENSORLG00015015468	rnaseh2b	95	51.736	Oryzias_latipes_hsok
ENSRNOG00000009192	Rnaseh2b	93	50.347	ENSOMEG00000012441	rnaseh2b	95	50.347	Oryzias_melastigma
ENSRNOG00000009192	Rnaseh2b	95	80.068	ENSOGAG00000016486	RNASEH2B	99	80.068	Otolemur_garnettii
ENSRNOG00000009192	Rnaseh2b	95	80.756	ENSOARG00000008701	RNASEH2B	98	80.756	Ovis_aries
ENSRNOG00000009192	Rnaseh2b	89	82.609	ENSPPAG00000026374	RNASEH2B	95	80.556	Pan_paniscus
ENSRNOG00000009192	Rnaseh2b	97	79.538	ENSPPRG00000012450	RNASEH2B	99	79.538	Panthera_pardus
ENSRNOG00000009192	Rnaseh2b	89	80.505	ENSPTIG00000013918	RNASEH2B	99	80.505	Panthera_tigris_altaica
ENSRNOG00000009192	Rnaseh2b	99	81.433	ENSPTRG00000005886	RNASEH2B	97	84.127	Pan_troglodytes
ENSRNOG00000009192	Rnaseh2b	100	80.449	ENSPANG00000022424	-	100	80.449	Papio_anubis
ENSRNOG00000009192	Rnaseh2b	92	48.944	ENSPKIG00000013386	rnaseh2b	92	48.944	Paramormyrops_kingsleyae
ENSRNOG00000009192	Rnaseh2b	62	53.403	ENSPSIG00000002224	RNASEH2B	89	53.403	Pelodiscus_sinensis
ENSRNOG00000009192	Rnaseh2b	65	54.902	ENSPMGG00000010299	rnaseh2b	98	54.902	Periophthalmus_magnuspinnatus
ENSRNOG00000009192	Rnaseh2b	100	90.879	ENSPEMG00000019721	Rnaseh2b	100	90.879	Peromyscus_maniculatus_bairdii
ENSRNOG00000009192	Rnaseh2b	92	56.537	ENSPCIG00000014535	-	95	56.537	Phascolarctos_cinereus
ENSRNOG00000009192	Rnaseh2b	87	53.676	ENSPFOG00000016722	rnaseh2b	87	53.676	Poecilia_formosa
ENSRNOG00000009192	Rnaseh2b	87	54.074	ENSPLAG00000011755	rnaseh2b	87	54.074	Poecilia_latipinna
ENSRNOG00000009192	Rnaseh2b	87	54.074	ENSPMEG00000002721	rnaseh2b	87	54.074	Poecilia_mexicana
ENSRNOG00000009192	Rnaseh2b	87	54.444	ENSPREG00000007737	rnaseh2b	87	54.444	Poecilia_reticulata
ENSRNOG00000009192	Rnaseh2b	100	80.769	ENSPPYG00000005378	RNASEH2B	100	80.769	Pongo_abelii
ENSRNOG00000009192	Rnaseh2b	100	84.466	ENSPCOG00000026623	RNASEH2B	100	84.466	Propithecus_coquereli
ENSRNOG00000009192	Rnaseh2b	81	80.237	ENSPVAG00000000508	RNASEH2B	95	80.237	Pteropus_vampyrus
ENSRNOG00000009192	Rnaseh2b	87	51.673	ENSPNYG00000013552	rnaseh2b	93	51.311	Pundamilia_nyererei
ENSRNOG00000009192	Rnaseh2b	87	50.923	ENSPNAG00000024825	rnaseh2b	87	50.923	Pygocentrus_nattereri
ENSRNOG00000009192	Rnaseh2b	100	80.906	ENSRBIG00000028928	-	100	80.906	Rhinopithecus_bieti
ENSRNOG00000009192	Rnaseh2b	97	69.799	ENSRBIG00000036017	-	97	69.799	Rhinopithecus_bieti
ENSRNOG00000009192	Rnaseh2b	73	69.333	ENSRROG00000044915	-	86	69.333	Rhinopithecus_roxellana
ENSRNOG00000009192	Rnaseh2b	100	80.906	ENSRROG00000018808	-	100	80.906	Rhinopithecus_roxellana
ENSRNOG00000009192	Rnaseh2b	99	81.250	ENSSBOG00000008081	RNASEH2B	99	82.734	Saimiri_boliviensis_boliviensis
ENSRNOG00000009192	Rnaseh2b	97	61.130	ENSSHAG00000016190	RNASEH2B	97	61.130	Sarcophilus_harrisii
ENSRNOG00000009192	Rnaseh2b	91	51.601	ENSSFOG00015010190	rnaseh2b	91	51.601	Scleropages_formosus
ENSRNOG00000009192	Rnaseh2b	87	52.788	ENSSMAG00000001546	rnaseh2b	87	52.788	Scophthalmus_maximus
ENSRNOG00000009192	Rnaseh2b	90	51.971	ENSSDUG00000007567	rnaseh2b	90	51.971	Seriola_dumerili
ENSRNOG00000009192	Rnaseh2b	90	51.601	ENSSLDG00000012485	rnaseh2b	90	51.601	Seriola_lalandi_dorsalis
ENSRNOG00000009192	Rnaseh2b	85	59.316	ENSSPUG00000006745	-	95	59.316	Sphenodon_punctatus
ENSRNOG00000009192	Rnaseh2b	90	50.896	ENSSPAG00000020926	rnaseh2b	90	50.896	Stegastes_partitus
ENSRNOG00000009192	Rnaseh2b	90	82.374	ENSSSCG00000024385	RNASEH2B	99	83.465	Sus_scrofa
ENSRNOG00000009192	Rnaseh2b	88	60.517	ENSTGUG00000012104	RNASEH2B	99	60.517	Taeniopygia_guttata
ENSRNOG00000009192	Rnaseh2b	88	52.963	ENSTRUG00000015098	rnaseh2b	87	53.358	Takifugu_rubripes
ENSRNOG00000009192	Rnaseh2b	87	52.941	ENSTNIG00000013861	rnaseh2b	87	52.941	Tetraodon_nigroviridis
ENSRNOG00000009192	Rnaseh2b	93	75.172	ENSTTRG00000010761	RNASEH2B	94	75.172	Tursiops_truncatus
ENSRNOG00000009192	Rnaseh2b	93	82.230	ENSUAMG00000022849	RNASEH2B	99	82.310	Ursus_americanus
ENSRNOG00000009192	Rnaseh2b	93	81.882	ENSUMAG00000018556	RNASEH2B	99	81.949	Ursus_maritimus
ENSRNOG00000009192	Rnaseh2b	93	81.944	ENSVPAG00000005679	RNASEH2B	100	81.944	Vicugna_pacos
ENSRNOG00000009192	Rnaseh2b	92	79.859	ENSVVUG00000024015	RNASEH2B	85	79.859	Vulpes_vulpes
ENSRNOG00000009192	Rnaseh2b	99	54.072	ENSXETG00000020720	rnaseh2b	99	54.072	Xenopus_tropicalis
ENSRNOG00000009192	Rnaseh2b	87	53.160	ENSXCOG00000018732	rnaseh2b	89	52.852	Xiphophorus_couchianus
ENSRNOG00000009192	Rnaseh2b	87	54.104	ENSXMAG00000022554	rnaseh2b	87	54.104	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001701	in utero embryonic development	-	IEA	Process
GO:0001701	in utero embryonic development	-	ISO	Process
GO:0004523	RNA-DNA hybrid ribonuclease activity	21873635.	IBA	Function
GO:0004523	RNA-DNA hybrid ribonuclease activity	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	21873635.	IBA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0006401	RNA catabolic process	21873635.	IBA	Process
GO:0006401	RNA catabolic process	-	ISO	Process
GO:0006401	RNA catabolic process	-	ISS	Process
GO:0009259	ribonucleotide metabolic process	21873635.	IBA	Process
GO:0009259	ribonucleotide metabolic process	-	ISO	Process
GO:0010389	regulation of G2/M transition of mitotic cell cycle	-	IEA	Process
GO:0010389	regulation of G2/M transition of mitotic cell cycle	-	ISO	Process
GO:0010629	negative regulation of gene expression	-	IEA	Process
GO:0010629	negative regulation of gene expression	-	ISO	Process
GO:0032299	ribonuclease H2 complex	21873635.	IBA	Component
GO:0032299	ribonuclease H2 complex	-	ISO	Component
GO:0032299	ribonuclease H2 complex	-	ISS	Component
GO:0048146	positive regulation of fibroblast proliferation	-	IEA	Process
GO:0048146	positive regulation of fibroblast proliferation	-	ISO	Process
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	-	IEA	Process
GO:2000001	regulation of DNA damage checkpoint	-	IEA	Process
GO:2000001	regulation of DNA damage checkpoint	-	ISO	Process