EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000009245 (Gene tree)
Gene ID: 366017
Gene Symbol: Exosc2
Alias: LOC366017
Full Name: exosome component 2
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 10706 bases
Position: chr3:10151284-10161989
Accession: 1306573
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000012311	ECR1_N	PF14382.6	3.7e-15	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000093494	-	789	-	-	- (aa)	-	-
ENSRNOT00000012312	-	1902	-	ENSRNOP00000012311	293 (aa)	-	D3ZBP3
ENSRNOT00000093246	-	389	-	ENSRNOP00000076189	57 (aa)	-	A0A1W2Q694
ENSRNOT00000093692	-	830	-	-	- (aa)	-	-

Gene Model

Click here to download ENSRNOG00000009245's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000009245's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000009245	Exosc2	100	94.881	ENSG00000130713	EXOSC2	100	94.881	Homo_sapiens
ENSRNOG00000009245	Exosc2	96	74.296	ENSAPOG00000008861	exosc2	97	77.736	Acanthochromis_polyacanthus
ENSRNOG00000009245	Exosc2	100	94.198	ENSAMEG00000016239	EXOSC2	100	94.198	Ailuropoda_melanoleuca
ENSRNOG00000009245	Exosc2	100	77.133	ENSACIG00000019054	exosc2	100	77.133	Amphilophus_citrinellus
ENSRNOG00000009245	Exosc2	100	77.816	ENSAOCG00000004983	exosc2	100	77.816	Amphiprion_ocellaris
ENSRNOG00000009245	Exosc2	100	77.816	ENSAOCG00000008577	exosc2	100	77.816	Amphiprion_ocellaris
ENSRNOG00000009245	Exosc2	100	77.816	ENSAPEG00000014088	exosc2	100	77.816	Amphiprion_percula
ENSRNOG00000009245	Exosc2	100	78.157	ENSATEG00000018680	exosc2	100	78.157	Anabas_testudineus
ENSRNOG00000009245	Exosc2	96	88.652	ENSAPLG00000012516	EXOSC2	97	88.652	Anas_platyrhynchos
ENSRNOG00000009245	Exosc2	99	84.932	ENSACAG00000002706	EXOSC2	99	84.932	Anolis_carolinensis
ENSRNOG00000009245	Exosc2	100	76.451	ENSACLG00000013613	exosc2	100	76.451	Astatotilapia_calliptera
ENSRNOG00000009245	Exosc2	100	80.339	ENSAMXG00000042605	exosc2	100	80.339	Astyanax_mexicanus
ENSRNOG00000009245	Exosc2	100	94.881	ENSBTAG00000048071	EXOSC2	100	94.881	Bos_taurus
ENSRNOG00000009245	Exosc2	99	40.940	WBGene00022232	exos-2	98	40.940	Caenorhabditis_elegans
ENSRNOG00000009245	Exosc2	100	94.881	ENSCJAG00000020537	EXOSC2	100	94.881	Callithrix_jacchus
ENSRNOG00000009245	Exosc2	99	93.151	ENSCAFG00000019941	EXOSC2	99	93.151	Canis_familiaris
ENSRNOG00000009245	Exosc2	100	93.174	ENSCAFG00020024047	EXOSC2	100	93.174	Canis_lupus_dingo
ENSRNOG00000009245	Exosc2	100	95.222	ENSCHIG00000021398	EXOSC2	100	95.222	Capra_hircus
ENSRNOG00000009245	Exosc2	100	94.539	ENSTSYG00000001805	EXOSC2	100	94.539	Carlito_syrichta
ENSRNOG00000009245	Exosc2	100	90.444	ENSCPOG00000005902	EXOSC2	100	90.444	Cavia_porcellus
ENSRNOG00000009245	Exosc2	100	94.881	ENSCCAG00000019749	EXOSC2	100	94.881	Cebus_capucinus
ENSRNOG00000009245	Exosc2	100	94.539	ENSCATG00000025389	-	100	94.539	Cercocebus_atys
ENSRNOG00000009245	Exosc2	100	95.222	ENSCLAG00000006195	EXOSC2	100	95.222	Chinchilla_lanigera
ENSRNOG00000009245	Exosc2	100	94.539	ENSCSAG00000014760	EXOSC2	100	94.539	Chlorocebus_sabaeus
ENSRNOG00000009245	Exosc2	100	93.515	ENSCHOG00000000858	EXOSC2	100	93.515	Choloepus_hoffmanni
ENSRNOG00000009245	Exosc2	99	87.329	ENSCPBG00000022626	EXOSC2	99	87.329	Chrysemys_picta_bellii
ENSRNOG00000009245	Exosc2	96	60.976	ENSCING00000014934	-	94	60.976	Ciona_intestinalis
ENSRNOG00000009245	Exosc2	92	61.957	ENSCSAVG00000003684	-	100	61.957	Ciona_savignyi
ENSRNOG00000009245	Exosc2	99	86.986	ENSCANG00000029298	-	99	86.986	Colobus_angolensis_palliatus
ENSRNOG00000009245	Exosc2	100	94.539	ENSCANG00000039828	-	100	94.539	Colobus_angolensis_palliatus
ENSRNOG00000009245	Exosc2	100	97.270	ENSCGRG00001013981	Exosc2	100	97.270	Cricetulus_griseus_chok1gshd
ENSRNOG00000009245	Exosc2	100	97.270	ENSCGRG00000017629	Exosc2	100	97.270	Cricetulus_griseus_crigri
ENSRNOG00000009245	Exosc2	100	76.451	ENSCSEG00000016539	exosc2	100	76.451	Cynoglossus_semilaevis
ENSRNOG00000009245	Exosc2	100	76.109	ENSCVAG00000022260	exosc2	100	76.109	Cyprinodon_variegatus
ENSRNOG00000009245	Exosc2	100	77.627	ENSDARG00000028688	exosc2	100	77.627	Danio_rerio
ENSRNOG00000009245	Exosc2	91	95.131	ENSDNOG00000025767	-	100	95.131	Dasypus_novemcinctus
ENSRNOG00000009245	Exosc2	100	94.881	ENSDORG00000009238	Exosc2	100	94.881	Dipodomys_ordii
ENSRNOG00000009245	Exosc2	91	59.259	FBgn0034879	Rrp4	91	59.630	Drosophila_melanogaster
ENSRNOG00000009245	Exosc2	95	76.534	ENSETEG00000016130	-	100	76.534	Echinops_telfairi
ENSRNOG00000009245	Exosc2	100	95.563	ENSEASG00005008475	EXOSC2	86	95.563	Equus_asinus_asinus
ENSRNOG00000009245	Exosc2	100	95.563	ENSECAG00000007897	EXOSC2	86	95.563	Equus_caballus
ENSRNOG00000009245	Exosc2	100	78.644	ENSELUG00000013641	exosc2	100	78.644	Esox_lucius
ENSRNOG00000009245	Exosc2	100	93.857	ENSFCAG00000025936	EXOSC2	100	93.857	Felis_catus
ENSRNOG00000009245	Exosc2	98	83.972	ENSFALG00000001446	EXOSC2	98	83.972	Ficedula_albicollis
ENSRNOG00000009245	Exosc2	100	93.174	ENSFDAG00000017196	EXOSC2	100	93.174	Fukomys_damarensis
ENSRNOG00000009245	Exosc2	100	76.792	ENSFHEG00000018571	exosc2	100	76.792	Fundulus_heteroclitus
ENSRNOG00000009245	Exosc2	100	73.379	ENSGMOG00000011785	exosc2	99	73.379	Gadus_morhua
ENSRNOG00000009245	Exosc2	99	86.301	ENSGALG00000040373	EXOSC2	99	86.301	Gallus_gallus
ENSRNOG00000009245	Exosc2	99	75.685	ENSGAFG00000010283	exosc2	99	75.685	Gambusia_affinis
ENSRNOG00000009245	Exosc2	100	75.768	ENSGACG00000016805	exosc2	99	77.108	Gasterosteus_aculeatus
ENSRNOG00000009245	Exosc2	87	90.196	ENSGAGG00000021026	EXOSC2	96	90.196	Gopherus_agassizii
ENSRNOG00000009245	Exosc2	100	94.198	ENSGGOG00000010578	EXOSC2	100	94.198	Gorilla_gorilla
ENSRNOG00000009245	Exosc2	100	77.133	ENSHBUG00000022437	exosc2	100	77.133	Haplochromis_burtoni
ENSRNOG00000009245	Exosc2	100	94.881	ENSHGLG00000012834	EXOSC2	100	94.881	Heterocephalus_glaber_female
ENSRNOG00000009245	Exosc2	100	94.881	ENSHGLG00100007092	EXOSC2	100	94.881	Heterocephalus_glaber_male
ENSRNOG00000009245	Exosc2	100	75.768	ENSHCOG00000019130	exosc2	100	75.768	Hippocampus_comes
ENSRNOG00000009245	Exosc2	100	77.551	ENSIPUG00000015397	exosc2	100	77.551	Ictalurus_punctatus
ENSRNOG00000009245	Exosc2	100	95.563	ENSSTOG00000005999	EXOSC2	100	95.563	Ictidomys_tridecemlineatus
ENSRNOG00000009245	Exosc2	100	95.904	ENSJJAG00000003188	Exosc2	100	95.904	Jaculus_jaculus
ENSRNOG00000009245	Exosc2	99	76.712	ENSKMAG00000017397	exosc2	99	76.712	Kryptolebias_marmoratus
ENSRNOG00000009245	Exosc2	100	75.427	ENSLBEG00000019269	exosc2	100	75.427	Labrus_bergylta
ENSRNOG00000009245	Exosc2	100	82.993	ENSLACG00000015530	EXOSC2	100	82.993	Latimeria_chalumnae
ENSRNOG00000009245	Exosc2	100	94.898	ENSLAFG00000006984	EXOSC2	100	94.898	Loxodonta_africana
ENSRNOG00000009245	Exosc2	100	80.546	ENSMFAG00000034160	-	84	80.546	Macaca_fascicularis
ENSRNOG00000009245	Exosc2	100	94.539	ENSMFAG00000000597	-	100	94.539	Macaca_fascicularis
ENSRNOG00000009245	Exosc2	100	91.809	ENSMMUG00000012498	EXOSC2	100	91.809	Macaca_mulatta
ENSRNOG00000009245	Exosc2	100	94.539	ENSMNEG00000031861	-	100	94.539	Macaca_nemestrina
ENSRNOG00000009245	Exosc2	100	81.570	ENSMNEG00000028704	-	91	81.570	Macaca_nemestrina
ENSRNOG00000009245	Exosc2	100	80.546	ENSMLEG00000029891	-	91	80.546	Mandrillus_leucophaeus
ENSRNOG00000009245	Exosc2	100	94.539	ENSMLEG00000042587	-	100	94.539	Mandrillus_leucophaeus
ENSRNOG00000009245	Exosc2	100	77.474	ENSMAMG00000012466	exosc2	100	77.474	Mastacembelus_armatus
ENSRNOG00000009245	Exosc2	100	75.768	ENSMZEG00005018737	exosc2	100	75.768	Maylandia_zebra
ENSRNOG00000009245	Exosc2	99	86.301	ENSMGAG00000005450	EXOSC2	99	86.301	Meleagris_gallopavo
ENSRNOG00000009245	Exosc2	100	96.928	ENSMAUG00000008299	Exosc2	100	96.928	Mesocricetus_auratus
ENSRNOG00000009245	Exosc2	100	95.222	ENSMICG00000015495	EXOSC2	100	95.222	Microcebus_murinus
ENSRNOG00000009245	Exosc2	100	97.611	ENSMOCG00000008262	Exosc2	100	97.611	Microtus_ochrogaster
ENSRNOG00000009245	Exosc2	100	77.816	ENSMMOG00000009616	exosc2	100	77.816	Mola_mola
ENSRNOG00000009245	Exosc2	100	90.785	ENSMODG00000012114	EXOSC2	100	90.785	Monodelphis_domestica
ENSRNOG00000009245	Exosc2	100	77.816	ENSMALG00000022132	exosc2	100	77.816	Monopterus_albus
ENSRNOG00000009245	Exosc2	100	97.270	MGP_CAROLIEiJ_G0023415	Exosc2	100	98.649	Mus_caroli
ENSRNOG00000009245	Exosc2	100	97.270	ENSMUSG00000039356	Exosc2	100	98.649	Mus_musculus
ENSRNOG00000009245	Exosc2	100	96.928	MGP_PahariEiJ_G0024872	Exosc2	100	98.649	Mus_pahari
ENSRNOG00000009245	Exosc2	100	97.270	MGP_SPRETEiJ_G0024332	Exosc2	100	98.649	Mus_spretus
ENSRNOG00000009245	Exosc2	100	93.857	ENSMPUG00000012686	EXOSC2	100	93.857	Mustela_putorius_furo
ENSRNOG00000009245	Exosc2	100	94.237	ENSMLUG00000008776	EXOSC2	100	94.237	Myotis_lucifugus
ENSRNOG00000009245	Exosc2	100	95.222	ENSNGAG00000019383	Exosc2	100	95.222	Nannospalax_galili
ENSRNOG00000009245	Exosc2	100	76.792	ENSNBRG00000005453	exosc2	100	76.792	Neolamprologus_brichardi
ENSRNOG00000009245	Exosc2	100	94.881	ENSNLEG00000012533	EXOSC2	100	94.881	Nomascus_leucogenys
ENSRNOG00000009245	Exosc2	100	70.307	ENSMEUG00000000795	EXOSC2	100	70.307	Notamacropus_eugenii
ENSRNOG00000009245	Exosc2	65	96.970	ENSOPRG00000008688	EXOSC2	65	96.970	Ochotona_princeps
ENSRNOG00000009245	Exosc2	87	93.701	ENSODEG00000019513	-	100	93.701	Octodon_degus
ENSRNOG00000009245	Exosc2	100	92.491	ENSODEG00000016880	-	100	92.491	Octodon_degus
ENSRNOG00000009245	Exosc2	100	76.792	ENSONIG00000014086	exosc2	100	76.792	Oreochromis_niloticus
ENSRNOG00000009245	Exosc2	100	84.983	ENSOANG00000001044	EXOSC2	100	84.983	Ornithorhynchus_anatinus
ENSRNOG00000009245	Exosc2	100	93.174	ENSOCUG00000007138	EXOSC2	100	93.174	Oryctolagus_cuniculus
ENSRNOG00000009245	Exosc2	100	77.474	ENSORLG00000007443	exosc2	100	77.474	Oryzias_latipes
ENSRNOG00000009245	Exosc2	100	77.133	ENSORLG00020018902	exosc2	100	77.133	Oryzias_latipes_hni
ENSRNOG00000009245	Exosc2	100	77.474	ENSORLG00015006767	exosc2	100	77.474	Oryzias_latipes_hsok
ENSRNOG00000009245	Exosc2	100	76.451	ENSOMEG00000003533	exosc2	100	76.451	Oryzias_melastigma
ENSRNOG00000009245	Exosc2	100	94.198	ENSOGAG00000007558	EXOSC2	100	94.198	Otolemur_garnettii
ENSRNOG00000009245	Exosc2	100	94.237	ENSOARG00000007438	EXOSC2	100	94.237	Ovis_aries
ENSRNOG00000009245	Exosc2	100	94.881	ENSPPAG00000034796	EXOSC2	100	94.881	Pan_paniscus
ENSRNOG00000009245	Exosc2	100	94.198	ENSPPRG00000001089	EXOSC2	100	94.198	Panthera_pardus
ENSRNOG00000009245	Exosc2	100	94.198	ENSPTIG00000021163	EXOSC2	100	94.198	Panthera_tigris_altaica
ENSRNOG00000009245	Exosc2	100	94.881	ENSPTRG00000045766	-	100	94.881	Pan_troglodytes
ENSRNOG00000009245	Exosc2	100	94.881	ENSPTRG00000021476	EXOSC2	100	94.881	Pan_troglodytes
ENSRNOG00000009245	Exosc2	100	94.539	ENSPANG00000025966	EXOSC2	100	94.539	Papio_anubis
ENSRNOG00000009245	Exosc2	99	78.893	ENSPKIG00000004271	exosc2	98	78.893	Paramormyrops_kingsleyae
ENSRNOG00000009245	Exosc2	99	88.014	ENSPSIG00000006743	EXOSC2	99	88.014	Pelodiscus_sinensis
ENSRNOG00000009245	Exosc2	86	79.051	ENSPMGG00000010980	exosc2	99	79.051	Periophthalmus_magnuspinnatus
ENSRNOG00000009245	Exosc2	100	97.611	ENSPEMG00000006345	Exosc2	100	97.611	Peromyscus_maniculatus_bairdii
ENSRNOG00000009245	Exosc2	100	75.932	ENSPMAG00000001280	exosc2	100	75.932	Petromyzon_marinus
ENSRNOG00000009245	Exosc2	100	90.785	ENSPCIG00000024122	EXOSC2	97	90.785	Phascolarctos_cinereus
ENSRNOG00000009245	Exosc2	99	76.109	ENSPFOG00000019819	exosc2	99	76.109	Poecilia_formosa
ENSRNOG00000009245	Exosc2	99	76.370	ENSPLAG00000004605	exosc2	99	76.370	Poecilia_latipinna
ENSRNOG00000009245	Exosc2	99	76.370	ENSPMEG00000010976	exosc2	99	76.370	Poecilia_mexicana
ENSRNOG00000009245	Exosc2	99	76.027	ENSPREG00000014306	exosc2	99	76.027	Poecilia_reticulata
ENSRNOG00000009245	Exosc2	100	94.539	ENSPPYG00000019695	EXOSC2	100	94.539	Pongo_abelii
ENSRNOG00000009245	Exosc2	100	95.222	ENSPCAG00000013400	EXOSC2	100	95.222	Procavia_capensis
ENSRNOG00000009245	Exosc2	100	94.539	ENSPCOG00000017639	EXOSC2	100	94.539	Propithecus_coquereli
ENSRNOG00000009245	Exosc2	100	93.174	ENSPVAG00000001513	EXOSC2	100	93.174	Pteropus_vampyrus
ENSRNOG00000009245	Exosc2	100	77.133	ENSPNYG00000007383	exosc2	100	77.133	Pundamilia_nyererei
ENSRNOG00000009245	Exosc2	100	79.252	ENSPNAG00000014281	exosc2	100	79.252	Pygocentrus_nattereri
ENSRNOG00000009245	Exosc2	100	94.198	ENSRBIG00000031203	-	100	94.198	Rhinopithecus_bieti
ENSRNOG00000009245	Exosc2	99	87.671	ENSRBIG00000029791	-	99	87.671	Rhinopithecus_bieti
ENSRNOG00000009245	Exosc2	100	94.198	ENSRROG00000010827	-	100	94.198	Rhinopithecus_roxellana
ENSRNOG00000009245	Exosc2	99	85.959	ENSRROG00000043609	-	99	85.959	Rhinopithecus_roxellana
ENSRNOG00000009245	Exosc2	89	41.554	YHR069C	-	82	41.554	Saccharomyces_cerevisiae
ENSRNOG00000009245	Exosc2	100	94.539	ENSSBOG00000022712	EXOSC2	100	94.539	Saimiri_boliviensis_boliviensis
ENSRNOG00000009245	Exosc2	100	90.444	ENSSHAG00000016050	EXOSC2	100	90.444	Sarcophilus_harrisii
ENSRNOG00000009245	Exosc2	100	78.157	ENSSFOG00015011245	exosc2	100	78.157	Scleropages_formosus
ENSRNOG00000009245	Exosc2	100	76.109	ENSSMAG00000003112	exosc2	100	76.109	Scophthalmus_maximus
ENSRNOG00000009245	Exosc2	100	76.014	ENSSDUG00000004634	exosc2	100	76.014	Seriola_dumerili
ENSRNOG00000009245	Exosc2	100	76.792	ENSSLDG00000010616	exosc2	100	76.792	Seriola_lalandi_dorsalis
ENSRNOG00000009245	Exosc2	99	86.780	ENSSPUG00000013391	EXOSC2	99	86.780	Sphenodon_punctatus
ENSRNOG00000009245	Exosc2	100	77.133	ENSSPAG00000022947	exosc2	100	77.133	Stegastes_partitus
ENSRNOG00000009245	Exosc2	100	95.563	ENSSSCG00000005704	EXOSC2	100	95.563	Sus_scrofa
ENSRNOG00000009245	Exosc2	99	83.219	ENSTGUG00000004697	EXOSC2	99	83.219	Taeniopygia_guttata
ENSRNOG00000009245	Exosc2	100	73.038	ENSTRUG00000022436	exosc2	100	73.038	Takifugu_rubripes
ENSRNOG00000009245	Exosc2	100	87.372	ENSTTRG00000015159	EXOSC2	100	87.372	Tursiops_truncatus
ENSRNOG00000009245	Exosc2	95	92.058	ENSUAMG00000009651	EXOSC2	99	92.058	Ursus_americanus
ENSRNOG00000009245	Exosc2	100	93.857	ENSUMAG00000018726	EXOSC2	100	93.857	Ursus_maritimus
ENSRNOG00000009245	Exosc2	100	93.174	ENSVVUG00000027665	EXOSC2	100	93.174	Vulpes_vulpes
ENSRNOG00000009245	Exosc2	100	79.522	ENSXETG00000001340	exosc2	100	79.522	Xenopus_tropicalis
ENSRNOG00000009245	Exosc2	99	76.370	ENSXMAG00000005265	exosc2	99	76.370	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000176	nuclear exosome (RNase complex)	21873635.	IBA	Component
GO:0000176	nuclear exosome (RNase complex)	-	ISO	Component
GO:0000177	cytoplasmic exosome (RNase complex)	21873635.	IBA	Component
GO:0000178	exosome (RNase complex)	21873635.	IBA	Component
GO:0000178	exosome (RNase complex)	-	ISO	Component
GO:0000467	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0004532	exoribonuclease activity	-	ISO	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0030307	positive regulation of cell growth	-	IEA	Process
GO:0030307	positive regulation of cell growth	-	ISO	Process
GO:0034427	nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	21873635.	IBA	Process
GO:0034475	U4 snRNA 3'-end processing	21873635.	IBA	Process
GO:0043928	exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay	21873635.	IBA	Process
GO:0071034	CUT catabolic process	21873635.	IBA	Process
GO:0071035	nuclear polyadenylation-dependent rRNA catabolic process	21873635.	IBA	Process
GO:0071038	nuclear polyadenylation-dependent tRNA catabolic process	21873635.	IBA	Process
GO:0071049	nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription	21873635.	IBA	Process
GO:0071051	polyadenylation-dependent snoRNA 3'-end processing	21873635.	IBA	Process