EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000009290 (Gene tree)
Gene ID: 295692
Gene Symbol: Nup35
Alias: MGC93680
Full Name: nucleoporin 35
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 26043 bases
Position: chr3:67870111-67896153
Accession: 1303069
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000012628	Nup35_RRM	PF05172.13	1.1e-26	1	1
ENSRNOP00000012628	Nup35_RRM_2	PF14605.6	1.5e-10	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000012628	-	1661	XM_006234430	ENSRNOP00000012628	325 (aa)	XP_006234492	Q68FY1

Gene Model

Click here to download ENSRNOG00000009290's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000009290's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000009290	Nup35	100	94.479	ENSG00000163002	NUP35	100	98.684	Homo_sapiens
ENSRNOG00000009290	Nup35	96	59.306	ENSAPOG00000003630	nup35	99	59.248	Acanthochromis_polyacanthus
ENSRNOG00000009290	Nup35	100	93.921	ENSAMEG00000001191	NUP35	100	93.921	Ailuropoda_melanoleuca
ENSRNOG00000009290	Nup35	79	59.073	ENSACIG00000023984	nup35	98	59.073	Amphilophus_citrinellus
ENSRNOG00000009290	Nup35	96	59.937	ENSAOCG00000007484	nup35	99	59.937	Amphiprion_ocellaris
ENSRNOG00000009290	Nup35	96	59.875	ENSAPEG00000020027	nup35	99	60.883	Amphiprion_percula
ENSRNOG00000009290	Nup35	96	59.683	ENSATEG00000019305	nup35	99	59.683	Anabas_testudineus
ENSRNOG00000009290	Nup35	99	83.025	ENSAPLG00000009161	NUP35	99	83.025	Anas_platyrhynchos
ENSRNOG00000009290	Nup35	100	79.635	ENSACAG00000008692	NUP35	100	79.635	Anolis_carolinensis
ENSRNOG00000009290	Nup35	100	93.252	ENSANAG00000021090	NUP35	100	93.252	Aotus_nancymaae
ENSRNOG00000009290	Nup35	96	58.537	ENSACLG00000013918	nup35	99	58.537	Astatotilapia_calliptera
ENSRNOG00000009290	Nup35	97	75.556	ENSAMXG00000003371	nup35	100	75.728	Astyanax_mexicanus
ENSRNOG00000009290	Nup35	100	94.801	ENSBTAG00000009777	NUP35	100	94.801	Bos_taurus
ENSRNOG00000009290	Nup35	100	94.172	ENSCJAG00000011104	NUP35	100	94.172	Callithrix_jacchus
ENSRNOG00000009290	Nup35	95	94.231	ENSCAFG00000031849	NUP35	100	94.231	Canis_familiaris
ENSRNOG00000009290	Nup35	100	93.313	ENSCAFG00020008408	NUP35	100	93.313	Canis_lupus_dingo
ENSRNOG00000009290	Nup35	95	95.484	ENSCHIG00000023148	NUP35	100	95.484	Capra_hircus
ENSRNOG00000009290	Nup35	100	93.231	ENSTSYG00000002117	NUP35	100	93.231	Carlito_syrichta
ENSRNOG00000009290	Nup35	100	76.292	ENSCAPG00000005703	NUP35	100	76.900	Cavia_aperea
ENSRNOG00000009290	Nup35	100	92.966	ENSCPOG00000011906	NUP35	100	93.578	Cavia_porcellus
ENSRNOG00000009290	Nup35	100	94.172	ENSCCAG00000025009	NUP35	100	94.172	Cebus_capucinus
ENSRNOG00000009290	Nup35	100	80.061	ENSCATG00000033109	NUP35	100	80.061	Cercocebus_atys
ENSRNOG00000009290	Nup35	100	92.966	ENSCLAG00000012559	NUP35	100	92.966	Chinchilla_lanigera
ENSRNOG00000009290	Nup35	100	94.172	ENSCSAG00000012620	NUP35	100	94.172	Chlorocebus_sabaeus
ENSRNOG00000009290	Nup35	100	84.709	ENSCPBG00000001303	NUP35	100	84.709	Chrysemys_picta_bellii
ENSRNOG00000009290	Nup35	95	42.284	ENSCING00000009659	-	97	42.284	Ciona_intestinalis
ENSRNOG00000009290	Nup35	95	44.767	ENSCSAVG00000007467	-	99	44.767	Ciona_savignyi
ENSRNOG00000009290	Nup35	100	94.172	ENSCANG00000030785	NUP35	100	94.822	Colobus_angolensis_palliatus
ENSRNOG00000009290	Nup35	100	96.923	ENSCGRG00001018638	-	100	96.923	Cricetulus_griseus_chok1gshd
ENSRNOG00000009290	Nup35	100	96.923	ENSCGRG00000011313	-	100	96.923	Cricetulus_griseus_crigri
ENSRNOG00000009290	Nup35	96	58.805	ENSCSEG00000000938	nup35	99	58.805	Cynoglossus_semilaevis
ENSRNOG00000009290	Nup35	96	60.568	ENSCVAG00000001792	nup35	99	60.568	Cyprinodon_variegatus
ENSRNOG00000009290	Nup35	95	72.990	ENSDARG00000012222	nup35	100	72.816	Danio_rerio
ENSRNOG00000009290	Nup35	100	92.661	ENSDNOG00000009513	-	88	92.661	Dasypus_novemcinctus
ENSRNOG00000009290	Nup35	100	92.049	ENSDNOG00000038754	-	100	92.049	Dasypus_novemcinctus
ENSRNOG00000009290	Nup35	100	93.252	ENSDORG00000010458	-	100	93.252	Dipodomys_ordii
ENSRNOG00000009290	Nup35	96	92.971	ENSETEG00000005896	NUP35	100	92.971	Echinops_telfairi
ENSRNOG00000009290	Nup35	96	55.556	ENSEBUG00000013034	nup35	99	55.280	Eptatretus_burgeri
ENSRNOG00000009290	Nup35	100	94.190	ENSEASG00005022100	NUP35	100	94.190	Equus_asinus_asinus
ENSRNOG00000009290	Nup35	99	93.865	ENSECAG00000003968	NUP35	100	94.194	Equus_caballus
ENSRNOG00000009290	Nup35	100	84.404	ENSEEUG00000008469	NUP35	100	84.404	Erinaceus_europaeus
ENSRNOG00000009290	Nup35	96	75.159	ENSELUG00000013693	nup35	100	75.161	Esox_lucius
ENSRNOG00000009290	Nup35	100	92.401	ENSFCAG00000025636	NUP35	100	92.949	Felis_catus
ENSRNOG00000009290	Nup35	100	81.098	ENSFALG00000013175	NUP35	100	81.098	Ficedula_albicollis
ENSRNOG00000009290	Nup35	100	92.945	ENSFDAG00000017998	NUP35	100	92.945	Fukomys_damarensis
ENSRNOG00000009290	Nup35	96	59.937	ENSFHEG00000010229	nup35	99	60.883	Fundulus_heteroclitus
ENSRNOG00000009290	Nup35	78	55.686	ENSGMOG00000003337	nup35	100	55.686	Gadus_morhua
ENSRNOG00000009290	Nup35	100	81.651	ENSGALG00000002689	NUP35	100	81.651	Gallus_gallus
ENSRNOG00000009290	Nup35	96	59.306	ENSGAFG00000022048	nup35	99	60.252	Gambusia_affinis
ENSRNOG00000009290	Nup35	96	59.365	ENSGACG00000008203	nup35	99	59.365	Gasterosteus_aculeatus
ENSRNOG00000009290	Nup35	95	86.495	ENSGAGG00000001967	NUP35	100	86.495	Gopherus_agassizii
ENSRNOG00000009290	Nup35	100	94.479	ENSGGOG00000009919	NUP35	100	94.479	Gorilla_gorilla
ENSRNOG00000009290	Nup35	96	73.885	ENSHGLG00000000414	-	97	73.885	Heterocephalus_glaber_female
ENSRNOG00000009290	Nup35	96	78.730	ENSHGLG00000008616	-	96	78.730	Heterocephalus_glaber_female
ENSRNOG00000009290	Nup35	100	92.966	ENSHGLG00000013230	NUP35	100	92.966	Heterocephalus_glaber_female
ENSRNOG00000009290	Nup35	96	73.885	ENSHGLG00100010869	-	97	73.885	Heterocephalus_glaber_male
ENSRNOG00000009290	Nup35	100	92.966	ENSHGLG00100012840	NUP35	100	92.966	Heterocephalus_glaber_male
ENSRNOG00000009290	Nup35	96	78.730	ENSHGLG00100000091	-	96	78.730	Heterocephalus_glaber_male
ENSRNOG00000009290	Nup35	96	58.413	ENSHCOG00000003882	nup35	99	58.413	Hippocampus_comes
ENSRNOG00000009290	Nup35	100	66.258	ENSIPUG00000002798	nup35	100	66.258	Ictalurus_punctatus
ENSRNOG00000009290	Nup35	100	94.154	ENSSTOG00000000711	NUP35	100	94.154	Ictidomys_tridecemlineatus
ENSRNOG00000009290	Nup35	85	87.004	ENSJJAG00000006387	-	93	87.004	Jaculus_jaculus
ENSRNOG00000009290	Nup35	100	79.141	ENSJJAG00000007003	-	98	79.141	Jaculus_jaculus
ENSRNOG00000009290	Nup35	99	86.293	ENSJJAG00000017434	-	99	86.293	Jaculus_jaculus
ENSRNOG00000009290	Nup35	100	93.865	ENSJJAG00000016432	-	100	93.865	Jaculus_jaculus
ENSRNOG00000009290	Nup35	96	57.500	ENSKMAG00000011162	nup35	98	59.062	Kryptolebias_marmoratus
ENSRNOG00000009290	Nup35	96	47.799	ENSLBEG00000012416	nup35	99	47.799	Labrus_bergylta
ENSRNOG00000009290	Nup35	95	80.386	ENSLACG00000008247	NUP35	100	80.386	Latimeria_chalumnae
ENSRNOG00000009290	Nup35	96	71.338	ENSLOCG00000006726	nup35	99	71.338	Lepisosteus_oculatus
ENSRNOG00000009290	Nup35	100	92.771	ENSLAFG00000008155	NUP35	100	92.771	Loxodonta_africana
ENSRNOG00000009290	Nup35	100	93.865	ENSMFAG00000000834	NUP35	100	94.498	Macaca_fascicularis
ENSRNOG00000009290	Nup35	100	94.172	ENSMMUG00000004140	NUP35	100	94.172	Macaca_mulatta
ENSRNOG00000009290	Nup35	100	94.172	ENSMNEG00000029014	NUP35	100	94.172	Macaca_nemestrina
ENSRNOG00000009290	Nup35	100	94.172	ENSMLEG00000035422	NUP35	100	94.822	Mandrillus_leucophaeus
ENSRNOG00000009290	Nup35	96	58.861	ENSMAMG00000013232	nup35	99	57.944	Mastacembelus_armatus
ENSRNOG00000009290	Nup35	97	59.443	ENSMZEG00005020619	nup35	95	59.443	Maylandia_zebra
ENSRNOG00000009290	Nup35	100	78.593	ENSMGAG00000004412	NUP35	100	78.593	Meleagris_gallopavo
ENSRNOG00000009290	Nup35	100	96.923	ENSMAUG00000013776	-	100	96.923	Mesocricetus_auratus
ENSRNOG00000009290	Nup35	100	94.190	ENSMICG00000006790	NUP35	100	95.484	Microcebus_murinus
ENSRNOG00000009290	Nup35	100	95.077	ENSMOCG00000014754	-	100	95.077	Microtus_ochrogaster
ENSRNOG00000009290	Nup35	97	57.547	ENSMMOG00000005026	nup35	99	57.643	Mola_mola
ENSRNOG00000009290	Nup35	100	88.000	ENSMODG00000010578	NUP35	100	88.000	Monodelphis_domestica
ENSRNOG00000009290	Nup35	96	59.561	ENSMALG00000020187	nup35	99	59.561	Monopterus_albus
ENSRNOG00000009290	Nup35	100	97.538	MGP_CAROLIEiJ_G0023709	-	100	97.538	Mus_caroli
ENSRNOG00000009290	Nup35	100	97.846	ENSMUSG00000026999	Nup35	100	97.846	Mus_musculus
ENSRNOG00000009290	Nup35	100	98.154	MGP_PahariEiJ_G0025160	-	100	98.154	Mus_pahari
ENSRNOG00000009290	Nup35	81	84.950	MGP_SPRETEiJ_G0033063	-	100	84.950	Mus_spretus
ENSRNOG00000009290	Nup35	100	94.225	ENSMPUG00000002063	NUP35	100	94.225	Mustela_putorius_furo
ENSRNOG00000009290	Nup35	100	93.884	ENSMLUG00000013154	NUP35	100	93.884	Myotis_lucifugus
ENSRNOG00000009290	Nup35	100	94.154	ENSNGAG00000012107	-	100	94.154	Nannospalax_galili
ENSRNOG00000009290	Nup35	96	57.729	ENSNBRG00000020466	nup35	97	58.934	Neolamprologus_brichardi
ENSRNOG00000009290	Nup35	100	94.479	ENSNLEG00000035026	NUP35	100	95.146	Nomascus_leucogenys
ENSRNOG00000009290	Nup35	65	66.667	ENSMEUG00000003001	-	65	66.667	Notamacropus_eugenii
ENSRNOG00000009290	Nup35	78	92.578	ENSOPRG00000016609	NUP35	78	92.578	Ochotona_princeps
ENSRNOG00000009290	Nup35	100	93.884	ENSODEG00000011202	-	100	93.884	Octodon_degus
ENSRNOG00000009290	Nup35	99	68.000	ENSODEG00000000280	-	99	68.000	Octodon_degus
ENSRNOG00000009290	Nup35	96	58.438	ENSONIG00000016251	nup35	99	57.317	Oreochromis_niloticus
ENSRNOG00000009290	Nup35	71	86.017	ENSOANG00000006793	-	97	86.017	Ornithorhynchus_anatinus
ENSRNOG00000009290	Nup35	100	94.801	ENSOCUG00000014407	NUP35	100	94.801	Oryctolagus_cuniculus
ENSRNOG00000009290	Nup35	96	60.000	ENSORLG00000013588	nup35	100	60.000	Oryzias_latipes
ENSRNOG00000009290	Nup35	96	60.000	ENSORLG00020008201	nup35	99	60.000	Oryzias_latipes_hni
ENSRNOG00000009290	Nup35	96	60.312	ENSORLG00015011096	nup35	100	60.317	Oryzias_latipes_hsok
ENSRNOG00000009290	Nup35	96	58.991	ENSOMEG00000007628	nup35	99	58.991	Oryzias_melastigma
ENSRNOG00000009290	Nup35	100	93.884	ENSOGAG00000011920	NUP35	100	94.495	Otolemur_garnettii
ENSRNOG00000009290	Nup35	100	95.413	ENSOARG00000016728	NUP35	100	95.413	Ovis_aries
ENSRNOG00000009290	Nup35	100	94.479	ENSPPAG00000036316	NUP35	100	95.146	Pan_paniscus
ENSRNOG00000009290	Nup35	100	92.401	ENSPPRG00000024726	NUP35	100	93.269	Panthera_pardus
ENSRNOG00000009290	Nup35	100	92.705	ENSPTIG00000017299	NUP35	100	92.705	Panthera_tigris_altaica
ENSRNOG00000009290	Nup35	100	94.479	ENSPTRG00000012711	NUP35	100	95.146	Pan_troglodytes
ENSRNOG00000009290	Nup35	100	94.172	ENSPANG00000013686	NUP35	100	94.172	Papio_anubis
ENSRNOG00000009290	Nup35	95	73.718	ENSPKIG00000022051	nup35	99	73.718	Paramormyrops_kingsleyae
ENSRNOG00000009290	Nup35	95	85.484	ENSPSIG00000002146	NUP35	100	85.484	Pelodiscus_sinensis
ENSRNOG00000009290	Nup35	95	58.147	ENSPMGG00000022915	nup35	97	58.466	Periophthalmus_magnuspinnatus
ENSRNOG00000009290	Nup35	100	97.538	ENSPEMG00000014718	-	100	97.538	Peromyscus_maniculatus_bairdii
ENSRNOG00000009290	Nup35	96	56.024	ENSPMAG00000006604	nup35	97	56.024	Petromyzon_marinus
ENSRNOG00000009290	Nup35	100	89.602	ENSPCIG00000015482	NUP35	100	89.602	Phascolarctos_cinereus
ENSRNOG00000009290	Nup35	96	58.991	ENSPFOG00000010020	nup35	99	59.937	Poecilia_formosa
ENSRNOG00000009290	Nup35	96	58.675	ENSPLAG00000005867	nup35	99	59.621	Poecilia_latipinna
ENSRNOG00000009290	Nup35	96	60.000	ENSPMEG00000010552	nup35	99	60.952	Poecilia_mexicana
ENSRNOG00000009290	Nup35	96	59.744	ENSPREG00000021005	nup35	99	60.703	Poecilia_reticulata
ENSRNOG00000009290	Nup35	100	94.172	ENSPPYG00000012998	-	80	94.172	Pongo_abelii
ENSRNOG00000009290	Nup35	96	66.134	ENSPCAG00000000605	NUP35	96	66.134	Procavia_capensis
ENSRNOG00000009290	Nup35	100	93.884	ENSPCOG00000024097	NUP35	100	94.495	Propithecus_coquereli
ENSRNOG00000009290	Nup35	100	93.578	ENSPVAG00000015908	NUP35	100	93.578	Pteropus_vampyrus
ENSRNOG00000009290	Nup35	97	59.752	ENSPNYG00000012486	nup35	95	59.752	Pundamilia_nyererei
ENSRNOG00000009290	Nup35	96	75.796	ENSPNAG00000005181	nup35	98	75.796	Pygocentrus_nattereri
ENSRNOG00000009290	Nup35	100	94.172	ENSRBIG00000039427	NUP35	100	94.822	Rhinopithecus_bieti
ENSRNOG00000009290	Nup35	100	93.865	ENSRROG00000026525	NUP35	100	93.865	Rhinopithecus_roxellana
ENSRNOG00000009290	Nup35	100	93.865	ENSSBOG00000018676	NUP35	100	93.865	Saimiri_boliviensis_boliviensis
ENSRNOG00000009290	Nup35	100	88.379	ENSSHAG00000009746	NUP35	100	88.379	Sarcophilus_harrisii
ENSRNOG00000009290	Nup35	96	74.204	ENSSFOG00015002390	nup35	99	74.204	Scleropages_formosus
ENSRNOG00000009290	Nup35	96	58.147	ENSSMAG00000015651	nup35	99	58.147	Scophthalmus_maximus
ENSRNOG00000009290	Nup35	99	57.276	ENSSDUG00000013118	nup35	99	57.944	Seriola_dumerili
ENSRNOG00000009290	Nup35	96	59.048	ENSSLDG00000018249	nup35	98	59.048	Seriola_lalandi_dorsalis
ENSRNOG00000009290	Nup35	96	69.872	ENSSARG00000001535	-	100	69.872	Sorex_araneus
ENSRNOG00000009290	Nup35	100	81.346	ENSSPUG00000018651	NUP35	100	81.346	Sphenodon_punctatus
ENSRNOG00000009290	Nup35	96	59.621	ENSSPAG00000018264	nup35	99	59.621	Stegastes_partitus
ENSRNOG00000009290	Nup35	100	94.495	ENSSSCG00000028949	NUP35	100	94.495	Sus_scrofa
ENSRNOG00000009290	Nup35	100	79.939	ENSTGUG00000011278	NUP35	100	79.939	Taeniopygia_guttata
ENSRNOG00000009290	Nup35	90	54.949	ENSTRUG00000014111	nup35	99	54.949	Takifugu_rubripes
ENSRNOG00000009290	Nup35	98	51.572	ENSTNIG00000011568	nup35	97	51.572	Tetraodon_nigroviridis
ENSRNOG00000009290	Nup35	100	90.826	ENSTBEG00000003328	NUP35	100	90.826	Tupaia_belangeri
ENSRNOG00000009290	Nup35	100	80.308	ENSTTRG00000002512	NUP35	100	80.308	Tursiops_truncatus
ENSRNOG00000009290	Nup35	61	94.924	ENSUAMG00000018696	-	96	94.924	Ursus_americanus
ENSRNOG00000009290	Nup35	93	93.791	ENSUMAG00000017104	NUP35	100	93.791	Ursus_maritimus
ENSRNOG00000009290	Nup35	100	95.107	ENSVPAG00000011898	NUP35	100	95.107	Vicugna_pacos
ENSRNOG00000009290	Nup35	95	94.551	ENSVVUG00000016832	NUP35	100	94.551	Vulpes_vulpes
ENSRNOG00000009290	Nup35	100	65.455	ENSXETG00000001335	nup35	100	65.455	Xenopus_tropicalis
ENSRNOG00000009290	Nup35	96	58.991	ENSXMAG00000000409	nup35	99	59.937	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003697	single-stranded DNA binding	21873635.	IBA	Function
GO:0005543	phospholipid binding	21873635.	IBA	Function
GO:0005652	nuclear lamina	15703211.	IDA	Component
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005886	plasma membrane	-	IEA	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0006607	NLS-bearing protein import into nucleus	21873635.	IBA	Process
GO:0006999	nuclear pore organization	21873635.	IBA	Process
GO:0017056	structural constituent of nuclear pore	21873635.	IBA	Function
GO:0031965	nuclear membrane	-	IEA	Component
GO:0031965	nuclear membrane	-	ISO	Component
GO:0042803	protein homodimerization activity	-	ISO	Function
GO:0044613	nuclear pore central transport channel	21873635.	IBA	Component
GO:0044615	nuclear pore nuclear basket	21873635.	IBA	Component
GO:0051028	mRNA transport	-	IEA	Process
GO:1990830	cellular response to leukemia inhibitory factor	-	ISO	Process