EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000009310 (Gene tree)
Gene ID: 310512
Gene Symbol: Nmd3
Alias: LOC310512|RGD1308468
Full Name: NMD3 ribosome export adaptor
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 25494 bases
Position: chr2:166402838-166428331
Accession: 1308468
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000012417	NMD3	PF04981.13	2.3e-80	1	1
ENSRNOP00000063236	NMD3	PF04981.13	2.3e-80	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000064244	-	1848	XM_008761090	ENSRNOP00000063236	503 (aa)	XP_008759312	F6PUQ7
ENSRNOT00000012417	-	1512	-	ENSRNOP00000012417	503 (aa)	-	F7ERL4

Gene Model

Click here to download ENSRNOG00000009310's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03008	Ribosome biogenesis in eukaryotes	KEGG
rno03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000009310's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000009310	Nmd3	100	94.632	ENSG00000169251	NMD3	100	96.789	Homo_sapiens
ENSRNOG00000009310	Nmd3	100	75.992	ENSAPOG00000022912	nmd3	99	75.992	Acanthochromis_polyacanthus
ENSRNOG00000009310	Nmd3	100	93.651	ENSAMEG00000001584	NMD3	99	93.651	Ailuropoda_melanoleuca
ENSRNOG00000009310	Nmd3	100	72.619	ENSACIG00000015196	nmd3	99	72.619	Amphilophus_citrinellus
ENSRNOG00000009310	Nmd3	100	76.190	ENSAOCG00000009086	nmd3	99	76.190	Amphiprion_ocellaris
ENSRNOG00000009310	Nmd3	100	76.190	ENSAPEG00000000329	nmd3	99	76.190	Amphiprion_percula
ENSRNOG00000009310	Nmd3	100	76.786	ENSATEG00000014351	nmd3	99	76.786	Anabas_testudineus
ENSRNOG00000009310	Nmd3	100	77.336	ENSAPLG00000014786	NMD3	99	77.336	Anas_platyrhynchos
ENSRNOG00000009310	Nmd3	100	81.909	ENSACAG00000007349	NMD3	99	81.909	Anolis_carolinensis
ENSRNOG00000009310	Nmd3	99	93.976	ENSANAG00000026434	NMD3	99	93.976	Aotus_nancymaae
ENSRNOG00000009310	Nmd3	100	76.587	ENSACLG00000015520	nmd3	99	76.587	Astatotilapia_calliptera
ENSRNOG00000009310	Nmd3	100	75.992	ENSAMXG00000014415	nmd3	99	75.992	Astyanax_mexicanus
ENSRNOG00000009310	Nmd3	100	93.042	ENSBTAG00000016228	NMD3	100	93.042	Bos_taurus
ENSRNOG00000009310	Nmd3	98	50.395	WBGene00012030	T25G3.3	98	50.395	Caenorhabditis_elegans
ENSRNOG00000009310	Nmd3	99	93.763	ENSCJAG00000002900	NMD3	97	93.763	Callithrix_jacchus
ENSRNOG00000009310	Nmd3	99	93.159	ENSCAFG00000014352	NMD3	97	93.159	Canis_familiaris
ENSRNOG00000009310	Nmd3	100	93.042	ENSCAFG00020021145	NMD3	99	93.042	Canis_lupus_dingo
ENSRNOG00000009310	Nmd3	100	93.241	ENSCHIG00000016015	NMD3	100	93.241	Capra_hircus
ENSRNOG00000009310	Nmd3	100	92.247	ENSTSYG00000002155	NMD3	99	92.247	Carlito_syrichta
ENSRNOG00000009310	Nmd3	80	93.500	ENSCAPG00000017861	NMD3	93	93.500	Cavia_aperea
ENSRNOG00000009310	Nmd3	87	94.050	ENSCPOG00000005953	NMD3	94	94.050	Cavia_porcellus
ENSRNOG00000009310	Nmd3	100	94.036	ENSCCAG00000037460	NMD3	100	94.036	Cebus_capucinus
ENSRNOG00000009310	Nmd3	100	94.831	ENSCATG00000030022	NMD3	100	94.831	Cercocebus_atys
ENSRNOG00000009310	Nmd3	100	92.843	ENSCLAG00000003155	NMD3	100	92.843	Chinchilla_lanigera
ENSRNOG00000009310	Nmd3	100	94.831	ENSCSAG00000012333	NMD3	100	94.831	Chlorocebus_sabaeus
ENSRNOG00000009310	Nmd3	80	93.662	ENSCHOG00000001240	NMD3	80	93.662	Choloepus_hoffmanni
ENSRNOG00000009310	Nmd3	100	82.704	ENSCPBG00000018318	NMD3	99	83.298	Chrysemys_picta_bellii
ENSRNOG00000009310	Nmd3	96	54.397	ENSCING00000002129	-	96	54.397	Ciona_intestinalis
ENSRNOG00000009310	Nmd3	87	54.875	ENSCSAVG00000001120	-	97	54.875	Ciona_savignyi
ENSRNOG00000009310	Nmd3	99	89.442	ENSCANG00000042939	NMD3	95	89.442	Colobus_angolensis_palliatus
ENSRNOG00000009310	Nmd3	100	82.704	ENSCGRG00001001792	Nmd3	100	82.704	Cricetulus_griseus_chok1gshd
ENSRNOG00000009310	Nmd3	97	97.546	ENSCGRG00000007947	Nmd3	98	97.546	Cricetulus_griseus_crigri
ENSRNOG00000009310	Nmd3	100	76.190	ENSCSEG00000017954	nmd3	99	76.190	Cynoglossus_semilaevis
ENSRNOG00000009310	Nmd3	100	69.643	ENSCVAG00000004672	nmd3	99	69.643	Cyprinodon_variegatus
ENSRNOG00000009310	Nmd3	100	75.446	ENSDARG00000015676	nmd3	99	75.446	Danio_rerio
ENSRNOG00000009310	Nmd3	100	92.445	ENSDNOG00000045222	NMD3	100	92.445	Dasypus_novemcinctus
ENSRNOG00000009310	Nmd3	97	83.402	ENSDORG00000005716	Nmd3	100	85.526	Dipodomys_ordii
ENSRNOG00000009310	Nmd3	97	52.535	FBgn0023542	Nmd3	94	52.535	Drosophila_melanogaster
ENSRNOG00000009310	Nmd3	100	81.710	ENSETEG00000003168	NMD3	99	81.710	Echinops_telfairi
ENSRNOG00000009310	Nmd3	89	58.575	ENSEBUG00000014316	nmd3	97	58.575	Eptatretus_burgeri
ENSRNOG00000009310	Nmd3	100	92.843	ENSEASG00005018672	NMD3	100	92.843	Equus_asinus_asinus
ENSRNOG00000009310	Nmd3	99	93.360	ENSECAG00000000188	NMD3	97	93.360	Equus_caballus
ENSRNOG00000009310	Nmd3	94	69.214	ENSEEUG00000010642	-	100	69.214	Erinaceus_europaeus
ENSRNOG00000009310	Nmd3	100	75.000	ENSELUG00000024123	nmd3	99	75.000	Esox_lucius
ENSRNOG00000009310	Nmd3	100	93.241	ENSFCAG00000022867	NMD3	99	93.241	Felis_catus
ENSRNOG00000009310	Nmd3	94	80.761	ENSFALG00000008711	NMD3	99	80.761	Ficedula_albicollis
ENSRNOG00000009310	Nmd3	98	76.364	ENSFDAG00000012197	-	99	76.364	Fukomys_damarensis
ENSRNOG00000009310	Nmd3	99	92.032	ENSFDAG00000013724	-	99	92.032	Fukomys_damarensis
ENSRNOG00000009310	Nmd3	100	74.802	ENSFHEG00000000415	nmd3	99	74.802	Fundulus_heteroclitus
ENSRNOG00000009310	Nmd3	97	74.233	ENSGMOG00000009675	nmd3	99	74.233	Gadus_morhua
ENSRNOG00000009310	Nmd3	100	78.728	ENSGALG00000009533	NMD3	99	78.728	Gallus_gallus
ENSRNOG00000009310	Nmd3	99	74.850	ENSGAFG00000012798	nmd3	95	74.850	Gambusia_affinis
ENSRNOG00000009310	Nmd3	100	75.198	ENSGACG00000010028	nmd3	99	75.198	Gasterosteus_aculeatus
ENSRNOG00000009310	Nmd3	100	82.107	ENSGAGG00000006556	NMD3	99	82.107	Gopherus_agassizii
ENSRNOG00000009310	Nmd3	99	75.697	ENSGGOG00000028590	-	99	75.697	Gorilla_gorilla
ENSRNOG00000009310	Nmd3	100	95.030	ENSGGOG00000007157	NMD3	100	95.030	Gorilla_gorilla
ENSRNOG00000009310	Nmd3	100	76.587	ENSHBUG00000001781	nmd3	99	76.587	Haplochromis_burtoni
ENSRNOG00000009310	Nmd3	100	74.950	ENSHGLG00000010477	-	100	74.950	Heterocephalus_glaber_female
ENSRNOG00000009310	Nmd3	100	93.638	ENSHGLG00000014451	-	100	93.638	Heterocephalus_glaber_female
ENSRNOG00000009310	Nmd3	100	75.149	ENSHGLG00100001042	-	100	75.149	Heterocephalus_glaber_male
ENSRNOG00000009310	Nmd3	100	93.638	ENSHGLG00100006613	-	100	93.638	Heterocephalus_glaber_male
ENSRNOG00000009310	Nmd3	99	75.149	ENSHCOG00000004292	nmd3	92	75.149	Hippocampus_comes
ENSRNOG00000009310	Nmd3	100	77.579	ENSIPUG00000005073	nmd3	99	77.579	Ictalurus_punctatus
ENSRNOG00000009310	Nmd3	100	95.626	ENSSTOG00000001899	NMD3	100	95.626	Ictidomys_tridecemlineatus
ENSRNOG00000009310	Nmd3	97	93.852	ENSJJAG00000019759	Nmd3	99	93.852	Jaculus_jaculus
ENSRNOG00000009310	Nmd3	100	76.786	ENSKMAG00000020427	nmd3	99	76.786	Kryptolebias_marmoratus
ENSRNOG00000009310	Nmd3	100	75.494	ENSLBEG00000022216	nmd3	99	75.494	Labrus_bergylta
ENSRNOG00000009310	Nmd3	99	73.695	ENSLACG00000005731	NMD3	99	76.430	Latimeria_chalumnae
ENSRNOG00000009310	Nmd3	100	76.984	ENSLOCG00000003561	nmd3	99	76.984	Lepisosteus_oculatus
ENSRNOG00000009310	Nmd3	100	91.270	ENSLAFG00000007231	NMD3	100	91.270	Loxodonta_africana
ENSRNOG00000009310	Nmd3	100	94.632	ENSMFAG00000040934	NMD3	100	94.632	Macaca_fascicularis
ENSRNOG00000009310	Nmd3	99	94.024	ENSMMUG00000009564	NMD3	99	93.248	Macaca_mulatta
ENSRNOG00000009310	Nmd3	100	94.632	ENSMNEG00000034626	NMD3	100	94.632	Macaca_nemestrina
ENSRNOG00000009310	Nmd3	88	93.228	ENSMLEG00000002741	NMD3	100	93.228	Mandrillus_leucophaeus
ENSRNOG00000009310	Nmd3	100	75.595	ENSMAMG00000012427	nmd3	99	75.595	Mastacembelus_armatus
ENSRNOG00000009310	Nmd3	100	76.587	ENSMZEG00005016888	nmd3	99	76.587	Maylandia_zebra
ENSRNOG00000009310	Nmd3	100	78.529	ENSMGAG00000010498	NMD3	99	78.529	Meleagris_gallopavo
ENSRNOG00000009310	Nmd3	100	97.217	ENSMAUG00000000633	Nmd3	100	97.217	Mesocricetus_auratus
ENSRNOG00000009310	Nmd3	100	93.439	ENSMICG00000049196	NMD3	100	93.439	Microcebus_murinus
ENSRNOG00000009310	Nmd3	99	96.414	ENSMOCG00000005180	Nmd3	100	96.414	Microtus_ochrogaster
ENSRNOG00000009310	Nmd3	100	76.040	ENSMMOG00000012765	nmd3	99	76.040	Mola_mola
ENSRNOG00000009310	Nmd3	100	63.707	ENSMODG00000016296	NMD3	100	64.547	Monodelphis_domestica
ENSRNOG00000009310	Nmd3	100	76.389	ENSMALG00000009256	nmd3	99	76.389	Monopterus_albus
ENSRNOG00000009310	Nmd3	100	96.024	MGP_CAROLIEiJ_G0025069	Nmd3	100	96.024	Mus_caroli
ENSRNOG00000009310	Nmd3	100	96.223	ENSMUSG00000027787	Nmd3	100	96.223	Mus_musculus
ENSRNOG00000009310	Nmd3	100	96.620	MGP_PahariEiJ_G0026512	Nmd3	100	96.620	Mus_pahari
ENSRNOG00000009310	Nmd3	100	96.024	MGP_SPRETEiJ_G0026011	Nmd3	100	96.024	Mus_spretus
ENSRNOG00000009310	Nmd3	100	94.036	ENSMPUG00000002955	NMD3	99	94.036	Mustela_putorius_furo
ENSRNOG00000009310	Nmd3	97	89.409	ENSMLUG00000000701	NMD3	97	89.409	Myotis_lucifugus
ENSRNOG00000009310	Nmd3	99	95.618	ENSNGAG00000012307	Nmd3	99	95.618	Nannospalax_galili
ENSRNOG00000009310	Nmd3	100	75.992	ENSNBRG00000003324	nmd3	99	75.992	Neolamprologus_brichardi
ENSRNOG00000009310	Nmd3	100	95.030	ENSNLEG00000004655	NMD3	100	95.030	Nomascus_leucogenys
ENSRNOG00000009310	Nmd3	85	64.286	ENSOPRG00000007690	-	85	64.286	Ochotona_princeps
ENSRNOG00000009310	Nmd3	100	93.837	ENSODEG00000006270	NMD3	100	93.837	Octodon_degus
ENSRNOG00000009310	Nmd3	100	76.984	ENSONIG00000003643	nmd3	99	76.984	Oreochromis_niloticus
ENSRNOG00000009310	Nmd3	99	95.372	ENSOCUG00000017454	NMD3	99	95.372	Oryctolagus_cuniculus
ENSRNOG00000009310	Nmd3	100	75.595	ENSORLG00000006279	nmd3	99	75.595	Oryzias_latipes
ENSRNOG00000009310	Nmd3	100	75.397	ENSORLG00020003843	nmd3	99	75.397	Oryzias_latipes_hni
ENSRNOG00000009310	Nmd3	100	75.149	ENSORLG00015006379	nmd3	99	75.149	Oryzias_latipes_hsok
ENSRNOG00000009310	Nmd3	100	76.786	ENSOMEG00000012144	nmd3	99	76.786	Oryzias_melastigma
ENSRNOG00000009310	Nmd3	100	93.439	ENSOGAG00000014910	NMD3	100	93.439	Otolemur_garnettii
ENSRNOG00000009310	Nmd3	99	93.387	ENSOARG00000001883	NMD3	97	93.387	Ovis_aries
ENSRNOG00000009310	Nmd3	100	94.632	ENSPPAG00000043829	NMD3	100	94.632	Pan_paniscus
ENSRNOG00000009310	Nmd3	99	93.227	ENSPPRG00000000724	NMD3	98	93.227	Panthera_pardus
ENSRNOG00000009310	Nmd3	100	93.042	ENSPTIG00000016761	NMD3	99	93.042	Panthera_tigris_altaica
ENSRNOG00000009310	Nmd3	100	94.632	ENSPTRG00000015586	NMD3	100	94.632	Pan_troglodytes
ENSRNOG00000009310	Nmd3	99	94.223	ENSPANG00000006665	NMD3	95	94.223	Papio_anubis
ENSRNOG00000009310	Nmd3	100	75.000	ENSPKIG00000009928	nmd3	99	75.000	Paramormyrops_kingsleyae
ENSRNOG00000009310	Nmd3	100	82.505	ENSPSIG00000007591	NMD3	99	82.505	Pelodiscus_sinensis
ENSRNOG00000009310	Nmd3	100	72.619	ENSPMGG00000014015	nmd3	99	72.619	Periophthalmus_magnuspinnatus
ENSRNOG00000009310	Nmd3	100	97.217	ENSPEMG00000021880	Nmd3	100	97.217	Peromyscus_maniculatus_bairdii
ENSRNOG00000009310	Nmd3	100	82.903	ENSPCIG00000020869	NMD3	100	82.903	Phascolarctos_cinereus
ENSRNOG00000009310	Nmd3	100	75.794	ENSPFOG00000012103	nmd3	99	75.794	Poecilia_formosa
ENSRNOG00000009310	Nmd3	100	75.992	ENSPLAG00000008087	nmd3	99	75.992	Poecilia_latipinna
ENSRNOG00000009310	Nmd3	100	75.794	ENSPMEG00000008506	nmd3	99	75.794	Poecilia_mexicana
ENSRNOG00000009310	Nmd3	100	75.992	ENSPREG00000001848	nmd3	99	75.992	Poecilia_reticulata
ENSRNOG00000009310	Nmd3	100	95.030	ENSPPYG00000014263	NMD3	100	95.030	Pongo_abelii
ENSRNOG00000009310	Nmd3	91	74.783	ENSPCAG00000009851	NMD3	100	74.783	Procavia_capensis
ENSRNOG00000009310	Nmd3	85	94.958	ENSPVAG00000003301	NMD3	85	94.958	Pteropus_vampyrus
ENSRNOG00000009310	Nmd3	100	76.587	ENSPNYG00000006778	nmd3	99	76.587	Pundamilia_nyererei
ENSRNOG00000009310	Nmd3	100	75.992	ENSPNAG00000009442	nmd3	99	75.992	Pygocentrus_nattereri
ENSRNOG00000009310	Nmd3	100	90.855	ENSRBIG00000040379	NMD3	100	90.855	Rhinopithecus_bieti
ENSRNOG00000009310	Nmd3	100	95.427	ENSRROG00000036181	NMD3	100	95.427	Rhinopithecus_roxellana
ENSRNOG00000009310	Nmd3	97	42.270	YHR170W	NMD3	96	42.466	Saccharomyces_cerevisiae
ENSRNOG00000009310	Nmd3	98	94.297	ENSSBOG00000024021	NMD3	99	93.186	Saimiri_boliviensis_boliviensis
ENSRNOG00000009310	Nmd3	100	78.728	ENSSHAG00000016044	NMD3	100	78.728	Sarcophilus_harrisii
ENSRNOG00000009310	Nmd3	100	75.595	ENSSFOG00015003609	nmd3	99	75.595	Scleropages_formosus
ENSRNOG00000009310	Nmd3	100	74.603	ENSSMAG00000012887	nmd3	99	74.603	Scophthalmus_maximus
ENSRNOG00000009310	Nmd3	100	76.786	ENSSDUG00000023721	nmd3	99	76.786	Seriola_dumerili
ENSRNOG00000009310	Nmd3	100	76.587	ENSSLDG00000006565	nmd3	99	76.587	Seriola_lalandi_dorsalis
ENSRNOG00000009310	Nmd3	97	92.623	ENSSARG00000010402	NMD3	99	92.623	Sorex_araneus
ENSRNOG00000009310	Nmd3	99	82.164	ENSSPUG00000018791	NMD3	100	82.164	Sphenodon_punctatus
ENSRNOG00000009310	Nmd3	100	75.992	ENSSPAG00000014328	nmd3	99	75.992	Stegastes_partitus
ENSRNOG00000009310	Nmd3	100	93.241	ENSSSCG00000022952	NMD3	100	93.241	Sus_scrofa
ENSRNOG00000009310	Nmd3	100	79.523	ENSTGUG00000011140	-	100	79.523	Taeniopygia_guttata
ENSRNOG00000009310	Nmd3	91	79.610	ENSTGUG00000015141	-	100	79.610	Taeniopygia_guttata
ENSRNOG00000009310	Nmd3	100	75.000	ENSTRUG00000005958	nmd3	99	75.000	Takifugu_rubripes
ENSRNOG00000009310	Nmd3	100	67.594	ENSTBEG00000011783	-	100	67.594	Tupaia_belangeri
ENSRNOG00000009310	Nmd3	100	88.270	ENSTTRG00000012938	NMD3	100	88.270	Tursiops_truncatus
ENSRNOG00000009310	Nmd3	80	94.279	ENSUAMG00000009305	-	99	94.279	Ursus_americanus
ENSRNOG00000009310	Nmd3	99	93.775	ENSUMAG00000011070	NMD3	99	93.763	Ursus_maritimus
ENSRNOG00000009310	Nmd3	100	93.042	ENSVPAG00000008779	NMD3	100	93.042	Vicugna_pacos
ENSRNOG00000009310	Nmd3	100	93.837	ENSVVUG00000023055	NMD3	99	94.165	Vulpes_vulpes
ENSRNOG00000009310	Nmd3	100	80.716	ENSXETG00000027727	nmd3	99	80.716	Xenopus_tropicalis
ENSRNOG00000009310	Nmd3	69	69.159	ENSXCOG00000012490	nmd3	87	70.561	Xiphophorus_couchianus
ENSRNOG00000009310	Nmd3	100	75.595	ENSXMAG00000018406	nmd3	99	75.595	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000055	ribosomal large subunit export from nucleus	21873635.	IBA	Process
GO:0000055	ribosomal large subunit export from nucleus	-	ISO	Process
GO:0003674	molecular_function	-	ND	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0008150	biological_process	-	ND	Process
GO:0030674	protein binding, bridging	-	ISO	Function
GO:0032092	positive regulation of protein binding	-	ISO	Process
GO:0043023	ribosomal large subunit binding	21873635.	IBA	Function
GO:0043023	ribosomal large subunit binding	-	ISO	Function
GO:1902680	positive regulation of RNA biosynthetic process	-	ISO	Process
GO:1904751	positive regulation of protein localization to nucleolus	-	ISO	Process