EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000009539 (Gene tree)
Gene ID: 64015
Gene Symbol: Khdrbs3
Alias: Etle|SLM-2|Slm2|rSLM-2
Full Name: KH RNA binding domain containing%2C signal transduction associated 3
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 147773 bases
Position: chr7:110031696-110179468
Accession: 620921
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000012753	KH_1	PF00013.29	1.5e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000012753	-	1679	-	ENSRNOP00000012753	346 (aa)	-	F1LMN8

Gene Model

Click here to download ENSRNOG00000009539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000009539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000009539	Khdrbs3	99	55.618	ENSRNOG00000046794	Khdrbs1	77	57.143
ENSRNOG00000009539	Khdrbs3	77	35.789	ENSRNOG00000048297	LOC108348175	72	36.820
ENSRNOG00000009539	Khdrbs3	99	64.470	ENSRNOG00000012284	Khdrbs2	99	66.573

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000009539	Khdrbs3	100	95.665	ENSG00000131773	KHDRBS3	99	99.367	Homo_sapiens
ENSRNOG00000009539	Khdrbs3	92	95.268	ENSAMEG00000016744	KHDRBS3	100	93.231	Ailuropoda_melanoleuca
ENSRNOG00000009539	Khdrbs3	100	68.678	ENSACIG00000002529	KHDRBS3	100	73.285	Amphilophus_citrinellus
ENSRNOG00000009539	Khdrbs3	99	76.301	ENSAOCG00000006836	KHDRBS3	99	75.652	Amphiprion_ocellaris
ENSRNOG00000009539	Khdrbs3	99	76.301	ENSAPEG00000005415	KHDRBS3	99	75.652	Amphiprion_percula
ENSRNOG00000009539	Khdrbs3	99	76.012	ENSATEG00000010658	KHDRBS3	99	75.362	Anabas_testudineus
ENSRNOG00000009539	Khdrbs3	92	87.421	ENSAPLG00000014746	KHDRBS3	99	87.107	Anas_platyrhynchos
ENSRNOG00000009539	Khdrbs3	85	84.694	ENSACAG00000012042	KHDRBS3	100	84.014	Anolis_carolinensis
ENSRNOG00000009539	Khdrbs3	100	86.744	ENSANAG00000019406	KHDRBS3	100	87.032	Aotus_nancymaae
ENSRNOG00000009539	Khdrbs3	99	76.012	ENSACLG00000010826	KHDRBS3	99	75.072	Astatotilapia_calliptera
ENSRNOG00000009539	Khdrbs3	100	94.509	ENSBTAG00000002181	KHDRBS3	100	94.509	Bos_taurus
ENSRNOG00000009539	Khdrbs3	100	95.376	ENSCJAG00000004331	KHDRBS3	100	95.376	Callithrix_jacchus
ENSRNOG00000009539	Khdrbs3	100	95.087	ENSCAFG00000001166	KHDRBS3	100	95.087	Canis_familiaris
ENSRNOG00000009539	Khdrbs3	92	95.584	ENSCAFG00020013570	KHDRBS3	99	95.584	Canis_lupus_dingo
ENSRNOG00000009539	Khdrbs3	100	94.509	ENSCHIG00000016533	KHDRBS3	100	94.509	Capra_hircus
ENSRNOG00000009539	Khdrbs3	91	95.886	ENSTSYG00000004106	KHDRBS3	100	95.886	Carlito_syrichta
ENSRNOG00000009539	Khdrbs3	100	92.000	ENSCPOG00000000342	KHDRBS3	100	92.000	Cavia_porcellus
ENSRNOG00000009539	Khdrbs3	100	95.665	ENSCCAG00000031191	KHDRBS3	100	95.665	Cebus_capucinus
ENSRNOG00000009539	Khdrbs3	100	95.087	ENSCATG00000034823	KHDRBS3	100	95.087	Cercocebus_atys
ENSRNOG00000009539	Khdrbs3	99	94.737	ENSCLAG00000002164	KHDRBS3	100	94.737	Chinchilla_lanigera
ENSRNOG00000009539	Khdrbs3	94	93.846	ENSCSAG00000009815	KHDRBS3	100	93.846	Chlorocebus_sabaeus
ENSRNOG00000009539	Khdrbs3	100	88.184	ENSCPBG00000019654	KHDRBS3	100	87.608	Chrysemys_picta_bellii
ENSRNOG00000009539	Khdrbs3	99	95.058	ENSCANG00000031881	KHDRBS3	100	95.882	Colobus_angolensis_palliatus
ENSRNOG00000009539	Khdrbs3	91	98.101	ENSCGRG00001000113	Khdrbs3	100	98.101	Cricetulus_griseus_chok1gshd
ENSRNOG00000009539	Khdrbs3	99	73.699	ENSCSEG00000013385	KHDRBS3	99	73.043	Cynoglossus_semilaevis
ENSRNOG00000009539	Khdrbs3	99	74.783	ENSCVAG00000007211	KHDRBS3	99	74.783	Cyprinodon_variegatus
ENSRNOG00000009539	Khdrbs3	85	69.048	ENSDARG00000101020	KHDRBS3	97	66.887	Danio_rerio
ENSRNOG00000009539	Khdrbs3	85	90.785	ENSDNOG00000010878	KHDRBS3	100	90.785	Dasypus_novemcinctus
ENSRNOG00000009539	Khdrbs3	94	92.308	ENSDORG00000014595	-	94	92.308	Dipodomys_ordii
ENSRNOG00000009539	Khdrbs3	91	77.603	ENSETEG00000004701	KHDRBS3	100	77.603	Echinops_telfairi
ENSRNOG00000009539	Khdrbs3	92	95.899	ENSEASG00005022023	KHDRBS3	99	95.899	Equus_asinus_asinus
ENSRNOG00000009539	Khdrbs3	100	95.376	ENSECAG00000010194	KHDRBS3	100	95.376	Equus_caballus
ENSRNOG00000009539	Khdrbs3	91	76.582	ENSEEUG00000007062	KHDRBS3	100	76.582	Erinaceus_europaeus
ENSRNOG00000009539	Khdrbs3	99	74.286	ENSELUG00000011955	KHDRBS3	99	74.286	Esox_lucius
ENSRNOG00000009539	Khdrbs3	100	95.087	ENSFCAG00000000229	KHDRBS3	100	95.087	Felis_catus
ENSRNOG00000009539	Khdrbs3	100	86.167	ENSFALG00000002752	KHDRBS3	100	85.879	Ficedula_albicollis
ENSRNOG00000009539	Khdrbs3	92	95.268	ENSFDAG00000020910	KHDRBS3	93	95.268	Fukomys_damarensis
ENSRNOG00000009539	Khdrbs3	99	74.203	ENSFHEG00000017679	KHDRBS3	99	74.203	Fundulus_heteroclitus
ENSRNOG00000009539	Khdrbs3	92	71.787	ENSGMOG00000009156	KHDRBS3	100	71.069	Gadus_morhua
ENSRNOG00000009539	Khdrbs3	100	86.744	ENSGALG00000031519	KHDRBS3	100	86.455	Gallus_gallus
ENSRNOG00000009539	Khdrbs3	99	75.723	ENSGAFG00000018918	KHDRBS3	99	75.072	Gambusia_affinis
ENSRNOG00000009539	Khdrbs3	87	72.876	ENSGACG00000008847	KHDRBS3	100	72.100	Gasterosteus_aculeatus
ENSRNOG00000009539	Khdrbs3	100	87.320	ENSGAGG00000022819	KHDRBS3	100	86.455	Gopherus_agassizii
ENSRNOG00000009539	Khdrbs3	100	95.665	ENSGGOG00000000940	KHDRBS3	100	95.665	Gorilla_gorilla
ENSRNOG00000009539	Khdrbs3	99	75.723	ENSHBUG00000009781	KHDRBS3	99	74.783	Haplochromis_burtoni
ENSRNOG00000009539	Khdrbs3	100	94.798	ENSHGLG00000006718	KHDRBS3	100	94.798	Heterocephalus_glaber_female
ENSRNOG00000009539	Khdrbs3	100	77.457	ENSHGLG00000008364	-	100	77.457	Heterocephalus_glaber_female
ENSRNOG00000009539	Khdrbs3	91	95.253	ENSHGLG00100004576	-	100	95.253	Heterocephalus_glaber_male
ENSRNOG00000009539	Khdrbs3	97	78.869	ENSHGLG00100010562	-	96	78.869	Heterocephalus_glaber_male
ENSRNOG00000009539	Khdrbs3	96	73.494	ENSHCOG00000009110	KHDRBS3	99	72.810	Hippocampus_comes
ENSRNOG00000009539	Khdrbs3	99	76.522	ENSIPUG00000004984	khdrbs3	99	76.522	Ictalurus_punctatus
ENSRNOG00000009539	Khdrbs3	100	94.220	ENSSTOG00000008710	KHDRBS3	100	94.220	Ictidomys_tridecemlineatus
ENSRNOG00000009539	Khdrbs3	100	92.775	ENSJJAG00000011049	Khdrbs3	100	92.775	Jaculus_jaculus
ENSRNOG00000009539	Khdrbs3	93	66.667	ENSKMAG00000000152	-	80	76.493	Kryptolebias_marmoratus
ENSRNOG00000009539	Khdrbs3	99	75.714	ENSLBEG00000003951	KHDRBS3	86	75.072	Labrus_bergylta
ENSRNOG00000009539	Khdrbs3	85	79.322	ENSLOCG00000003734	KHDRBS3	99	79.322	Lepisosteus_oculatus
ENSRNOG00000009539	Khdrbs3	94	92.308	ENSLAFG00000004849	KHDRBS3	98	92.308	Loxodonta_africana
ENSRNOG00000009539	Khdrbs3	97	90.801	ENSMFAG00000041845	KHDRBS3	100	95.904	Macaca_fascicularis
ENSRNOG00000009539	Khdrbs3	99	93.314	ENSMMUG00000022248	KHDRBS3	99	95.899	Macaca_mulatta
ENSRNOG00000009539	Khdrbs3	100	95.376	ENSMNEG00000038285	KHDRBS3	100	95.376	Macaca_nemestrina
ENSRNOG00000009539	Khdrbs3	91	95.886	ENSMLEG00000032520	KHDRBS3	100	95.886	Mandrillus_leucophaeus
ENSRNOG00000009539	Khdrbs3	99	75.434	ENSMAMG00000003695	KHDRBS3	99	74.783	Mastacembelus_armatus
ENSRNOG00000009539	Khdrbs3	99	75.723	ENSMZEG00005001896	KHDRBS3	99	74.783	Maylandia_zebra
ENSRNOG00000009539	Khdrbs3	97	85.380	ENSMGAG00000012888	KHDRBS3	100	85.465	Meleagris_gallopavo
ENSRNOG00000009539	Khdrbs3	100	81.268	ENSMAUG00000008539	Khdrbs3	100	81.268	Mesocricetus_auratus
ENSRNOG00000009539	Khdrbs3	100	95.665	ENSMICG00000027467	KHDRBS3	100	95.665	Microcebus_murinus
ENSRNOG00000009539	Khdrbs3	100	97.399	ENSMOCG00000020954	Khdrbs3	100	97.399	Microtus_ochrogaster
ENSRNOG00000009539	Khdrbs3	79	76.812	ENSMMOG00000021238	KHDRBS3	69	77.239	Mola_mola
ENSRNOG00000009539	Khdrbs3	100	90.173	ENSMODG00000000975	KHDRBS3	99	90.173	Monodelphis_domestica
ENSRNOG00000009539	Khdrbs3	99	76.301	ENSMALG00000016210	KHDRBS3	99	75.652	Monopterus_albus
ENSRNOG00000009539	Khdrbs3	100	97.399	MGP_CAROLIEiJ_G0019855	Khdrbs3	100	97.399	Mus_caroli
ENSRNOG00000009539	Khdrbs3	100	96.821	ENSMUSG00000022332	Khdrbs3	100	100.000	Mus_musculus
ENSRNOG00000009539	Khdrbs3	100	97.399	MGP_PahariEiJ_G0019860	Khdrbs3	100	97.399	Mus_pahari
ENSRNOG00000009539	Khdrbs3	100	96.821	MGP_SPRETEiJ_G0020753	Khdrbs3	100	96.821	Mus_spretus
ENSRNOG00000009539	Khdrbs3	94	93.538	ENSMPUG00000001869	KHDRBS3	100	93.538	Mustela_putorius_furo
ENSRNOG00000009539	Khdrbs3	95	83.686	ENSMLUG00000004054	KHDRBS3	100	83.686	Myotis_lucifugus
ENSRNOG00000009539	Khdrbs3	100	75.504	ENSNBRG00000000697	KHDRBS3	100	74.566	Neolamprologus_brichardi
ENSRNOG00000009539	Khdrbs3	100	94.798	ENSNLEG00000010766	KHDRBS3	100	94.798	Nomascus_leucogenys
ENSRNOG00000009539	Khdrbs3	91	93.987	ENSOPRG00000000404	KHDRBS3	100	93.987	Ochotona_princeps
ENSRNOG00000009539	Khdrbs3	100	95.087	ENSODEG00000000682	KHDRBS3	100	95.087	Octodon_degus
ENSRNOG00000009539	Khdrbs3	92	75.786	ENSONIG00000007652	KHDRBS3	100	74.763	Oreochromis_niloticus
ENSRNOG00000009539	Khdrbs3	97	80.655	ENSOANG00000014074	KHDRBS3	100	82.143	Ornithorhynchus_anatinus
ENSRNOG00000009539	Khdrbs3	95	93.293	ENSOCUG00000000743	KHDRBS3	100	93.293	Oryctolagus_cuniculus
ENSRNOG00000009539	Khdrbs3	99	73.988	ENSORLG00000013441	KHDRBS3	99	73.333	Oryzias_latipes
ENSRNOG00000009539	Khdrbs3	99	73.988	ENSORLG00020021838	KHDRBS3	99	73.333	Oryzias_latipes_hni
ENSRNOG00000009539	Khdrbs3	99	71.387	ENSORLG00015010093	KHDRBS3	99	70.435	Oryzias_latipes_hsok
ENSRNOG00000009539	Khdrbs3	100	94.798	ENSOGAG00000005150	KHDRBS3	100	94.798	Otolemur_garnettii
ENSRNOG00000009539	Khdrbs3	99	89.535	ENSOARG00000005036	KHDRBS3	100	89.535	Ovis_aries
ENSRNOG00000009539	Khdrbs3	100	95.376	ENSPPAG00000043998	KHDRBS3	100	95.376	Pan_paniscus
ENSRNOG00000009539	Khdrbs3	100	95.087	ENSPPRG00000001453	KHDRBS3	100	95.087	Panthera_pardus
ENSRNOG00000009539	Khdrbs3	91	95.570	ENSPTIG00000005373	KHDRBS3	91	95.570	Panthera_tigris_altaica
ENSRNOG00000009539	Khdrbs3	100	86.127	ENSPTRG00000020608	KHDRBS3	100	86.127	Pan_troglodytes
ENSRNOG00000009539	Khdrbs3	100	95.376	ENSPANG00000006134	KHDRBS3	100	95.376	Papio_anubis
ENSRNOG00000009539	Khdrbs3	99	75.723	ENSPKIG00000002433	KHDRBS3	99	75.072	Paramormyrops_kingsleyae
ENSRNOG00000009539	Khdrbs3	100	85.920	ENSPSIG00000004366	KHDRBS3	100	85.920	Pelodiscus_sinensis
ENSRNOG00000009539	Khdrbs3	99	72.779	ENSPMGG00000018866	KHDRBS3	99	72.414	Periophthalmus_magnuspinnatus
ENSRNOG00000009539	Khdrbs3	99	76.301	ENSPREG00000015667	KHDRBS3	99	75.652	Poecilia_reticulata
ENSRNOG00000009539	Khdrbs3	97	94.362	ENSPPYG00000018899	KHDRBS3	100	94.362	Pongo_abelii
ENSRNOG00000009539	Khdrbs3	91	92.722	ENSPVAG00000017021	KHDRBS3	100	92.722	Pteropus_vampyrus
ENSRNOG00000009539	Khdrbs3	99	65.805	ENSPNYG00000007200	KHDRBS3	99	64.841	Pundamilia_nyererei
ENSRNOG00000009539	Khdrbs3	99	76.522	ENSPNAG00000013500	KHDRBS3	99	76.522	Pygocentrus_nattereri
ENSRNOG00000009539	Khdrbs3	100	95.665	ENSRBIG00000036854	KHDRBS3	100	95.665	Rhinopithecus_bieti
ENSRNOG00000009539	Khdrbs3	100	95.665	ENSRROG00000044792	KHDRBS3	100	95.665	Rhinopithecus_roxellana
ENSRNOG00000009539	Khdrbs3	100	95.087	ENSSBOG00000020642	KHDRBS3	100	96.246	Saimiri_boliviensis_boliviensis
ENSRNOG00000009539	Khdrbs3	99	75.942	ENSSFOG00015013177	khdrbs3	99	75.942	Scleropages_formosus
ENSRNOG00000009539	Khdrbs3	99	75.434	ENSSMAG00000020535	KHDRBS3	99	74.783	Scophthalmus_maximus
ENSRNOG00000009539	Khdrbs3	99	76.301	ENSSDUG00000000996	KHDRBS3	99	75.652	Seriola_dumerili
ENSRNOG00000009539	Khdrbs3	86	65.436	ENSSLDG00000006072	KHDRBS3	86	64.646	Seriola_lalandi_dorsalis
ENSRNOG00000009539	Khdrbs3	71	76.923	ENSSARG00000011751	KHDRBS3	100	76.923	Sorex_araneus
ENSRNOG00000009539	Khdrbs3	100	87.608	ENSSPUG00000005628	KHDRBS3	100	87.032	Sphenodon_punctatus
ENSRNOG00000009539	Khdrbs3	99	76.301	ENSSPAG00000018331	KHDRBS3	99	75.652	Stegastes_partitus
ENSRNOG00000009539	Khdrbs3	95	93.921	ENSSSCG00000005941	KHDRBS3	93	93.921	Sus_scrofa
ENSRNOG00000009539	Khdrbs3	100	86.455	ENSTGUG00000012611	KHDRBS3	100	86.167	Taeniopygia_guttata
ENSRNOG00000009539	Khdrbs3	99	69.075	ENSTRUG00000013451	KHDRBS3	99	68.406	Takifugu_rubripes
ENSRNOG00000009539	Khdrbs3	92	73.030	ENSTNIG00000014021	KHDRBS3	99	71.733	Tetraodon_nigroviridis
ENSRNOG00000009539	Khdrbs3	100	95.087	ENSTBEG00000004773	KHDRBS3	100	95.087	Tupaia_belangeri
ENSRNOG00000009539	Khdrbs3	100	93.931	ENSTTRG00000001270	KHDRBS3	100	93.931	Tursiops_truncatus
ENSRNOG00000009539	Khdrbs3	94	93.846	ENSUMAG00000002010	KHDRBS3	100	95.904	Ursus_maritimus
ENSRNOG00000009539	Khdrbs3	92	95.584	ENSVVUG00000019368	KHDRBS3	99	95.584	Vulpes_vulpes
ENSRNOG00000009539	Khdrbs3	93	77.640	ENSXETG00000009227	khdrbs3	100	77.640	Xenopus_tropicalis
ENSRNOG00000009539	Khdrbs3	72	76.000	ENSXCOG00000010479	KHDRBS3	81	75.100	Xiphophorus_couchianus
ENSRNOG00000009539	Khdrbs3	99	75.434	ENSXMAG00000005362	KHDRBS3	99	74.783	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0003723	RNA binding	-	ISO	Function
GO:0003723	RNA binding	-	ISS	Function
GO:0003727	single-stranded RNA binding	11118435.	IDA	Function
GO:0005515	protein binding	11118435.15345239.19282290.	IPI	Function
GO:0005634	nucleus	10332027.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0006397	mRNA processing	11118435.	IDA	Process
GO:0007283	spermatogenesis	10332027.	IEP	Process
GO:0017124	SH3 domain binding	-	IEA	Function
GO:0019904	protein domain specific binding	-	IEA	Function
GO:0019904	protein domain specific binding	-	ISO	Function
GO:0033120	positive regulation of RNA splicing	11118435.	IMP	Process
GO:0042802	identical protein binding	-	IEA	Function
GO:0042802	identical protein binding	-	ISO	Function
GO:0048024	regulation of mRNA splicing, via spliceosome	-	IEA	Process
GO:0048024	regulation of mRNA splicing, via spliceosome	-	ISO	Process
GO:0051259	protein complex oligomerization	-	IEA	Process
GO:0051259	protein complex oligomerization	-	ISO	Process