EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000009846 (Gene tree)
Gene ID
686103
Gene Symbol
Frg1
Alias
LOC686103
Full Name
FSHD region gene 1
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Plus strand
Length
21008 bases
Position
chr16:53957858-53978865
Accession
1585495
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000013078FRG1PF06229.122.3e-7811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000013078-1113-ENSRNOP00000013078258 (aa)-D3ZZK8
Gene Model
Click here to download ENSRNOG00000009846's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000009846's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000009846Frg110095.736ENSG00000109536FRG110096.552Homo_sapiens
ENSRNOG00000009846Frg110072.093ENSAPOG00000001060frg110072.093Acanthochromis_polyacanthus
ENSRNOG00000009846Frg110096.124ENSAMEG00000013503FRG110096.124Ailuropoda_melanoleuca
ENSRNOG00000009846Frg18675.336ENSACIG00000022283frg110075.336Amphilophus_citrinellus
ENSRNOG00000009846Frg18673.991ENSAOCG00000024240frg18873.451Amphiprion_ocellaris
ENSRNOG00000009846Frg110071.705ENSAPEG00000002486frg110071.318Amphiprion_percula
ENSRNOG00000009846Frg110069.380ENSATEG00000010414frg110069.380Anabas_testudineus
ENSRNOG00000009846Frg110084.884ENSAPLG00000007785-10084.884Anas_platyrhynchos
ENSRNOG00000009846Frg110079.845ENSACAG00000006877-10078.682Anolis_carolinensis
ENSRNOG00000009846Frg110093.411ENSANAG00000020876FRG110094.574Aotus_nancymaae
ENSRNOG00000009846Frg110065.517ENSACLG00000027065frg110064.751Astatotilapia_calliptera
ENSRNOG00000009846Frg110071.705ENSAMXG00000032700frg110072.093Astyanax_mexicanus
ENSRNOG00000009846Frg110096.124ENSBTAG00000007089FRG110096.124Bos_taurus
ENSRNOG00000009846Frg19940.293WBGene00014177frg-19940.293Caenorhabditis_elegans
ENSRNOG00000009846Frg110093.411ENSCJAG00000011272FRG110094.574Callithrix_jacchus
ENSRNOG00000009846Frg110096.124ENSCAFG00000007135FRG110096.124Canis_familiaris
ENSRNOG00000009846Frg18396.244ENSCAFG00020000082-8596.244Canis_lupus_dingo
ENSRNOG00000009846Frg110096.124ENSCHIG00000011585-10096.124Capra_hircus
ENSRNOG00000009846Frg19867.323ENSTSYG00000031599-10067.717Carlito_syrichta
ENSRNOG00000009846Frg18894.737ENSCAPG00000016056-9295.556Cavia_aperea
ENSRNOG00000009846Frg110092.248ENSCPOG00000022277-10093.411Cavia_porcellus
ENSRNOG00000009846Frg110093.411ENSCCAG00000024627FRG110094.574Cebus_capucinus
ENSRNOG00000009846Frg110095.736ENSCATG00000029230FRG110095.736Cercocebus_atys
ENSRNOG00000009846Frg110063.953ENSCLAG00000006068-10063.566Chinchilla_lanigera
ENSRNOG00000009846Frg19964.314ENSCLAG00000009263-10065.098Chinchilla_lanigera
ENSRNOG00000009846Frg110092.248ENSCLAG00000000370-10093.411Chinchilla_lanigera
ENSRNOG00000009846Frg110080.233ENSCLAG00000004960-10080.233Chinchilla_lanigera
ENSRNOG00000009846Frg18488.889ENSCSAG00000017729-10088.889Chlorocebus_sabaeus
ENSRNOG00000009846Frg110095.736ENSCSAG00000002899FRG110095.736Chlorocebus_sabaeus
ENSRNOG00000009846Frg18786.667ENSCPBG00000009211-8886.726Chrysemys_picta_bellii
ENSRNOG00000009846Frg19951.866ENSCING00000005161-9950.746Ciona_intestinalis
ENSRNOG00000009846Frg15153.788ENSCSAVG00000008018-10047.826Ciona_savignyi
ENSRNOG00000009846Frg110095.736ENSCANG00000020991FRG110095.736Colobus_angolensis_palliatus
ENSRNOG00000009846Frg110097.287ENSCGRG00001014998Frg110097.287Cricetulus_griseus_chok1gshd
ENSRNOG00000009846Frg110077.907ENSCGRG00000003902-9677.519Cricetulus_griseus_crigri
ENSRNOG00000009846Frg110097.287ENSCGRG00000011860-10097.287Cricetulus_griseus_crigri
ENSRNOG00000009846Frg19665.587ENSCSEG00000015950frg110065.587Cynoglossus_semilaevis
ENSRNOG00000009846Frg110070.930ENSCVAG00000009985frg110070.930Cyprinodon_variegatus
ENSRNOG00000009846Frg110073.643ENSDARG00000056504frg19381.481Danio_rerio
ENSRNOG00000009846Frg110095.349ENSDNOG00000014886FRG110095.349Dasypus_novemcinctus
ENSRNOG00000009846Frg110084.109ENSDORG00000016190Frg110084.109Dipodomys_ordii
ENSRNOG00000009846Frg110047.744FBgn0036964FRG18150.698Drosophila_melanogaster
ENSRNOG00000009846Frg110094.186ENSETEG00000012349-10094.186Echinops_telfairi
ENSRNOG00000009846Frg15753.378ENSEBUG00000012359FRG18953.378Eptatretus_burgeri
ENSRNOG00000009846Frg110091.473ENSEASG00005017497FRG110093.798Equus_asinus_asinus
ENSRNOG00000009846Frg110091.473ENSECAG00000003122FRG110093.798Equus_caballus
ENSRNOG00000009846Frg16196.178ENSEEUG00000000145-10096.178Erinaceus_europaeus
ENSRNOG00000009846Frg110071.705ENSELUG00000021712frg110071.705Esox_lucius
ENSRNOG00000009846Frg110096.124ENSFCAG00000025737FRG110096.124Felis_catus
ENSRNOG00000009846Frg18685.650ENSFALG00000011231-8885.841Ficedula_albicollis
ENSRNOG00000009846Frg110091.860ENSFDAG00000000962-10093.023Fukomys_damarensis
ENSRNOG00000009846Frg110082.692ENSFDAG00000012697-10082.692Fukomys_damarensis
ENSRNOG00000009846Frg110069.380ENSFHEG00000010540frg110069.380Fundulus_heteroclitus
ENSRNOG00000009846Frg110068.992ENSGMOG00000000867frg110069.380Gadus_morhua
ENSRNOG00000009846Frg110084.884ENSGALG00000013590-10083.721Gallus_gallus
ENSRNOG00000009846Frg18169.524ENSGAFG00000013855frg110065.714Gambusia_affinis
ENSRNOG00000009846Frg110070.543ENSGACG00000016888frg110070.543Gasterosteus_aculeatus
ENSRNOG00000009846Frg110084.109ENSGAGG00000025012-10084.109Gopherus_agassizii
ENSRNOG00000009846Frg16982.022ENSGGOG00000012888-9082.022Gorilla_gorilla
ENSRNOG00000009846Frg110064.729ENSGGOG00000040796-10064.729Gorilla_gorilla
ENSRNOG00000009846Frg110069.767ENSHBUG00000010667frg110070.543Haplochromis_burtoni
ENSRNOG00000009846Frg19986.381ENSHGLG00000020943-9987.549Heterocephalus_glaber_female
ENSRNOG00000009846Frg19987.938ENSHGLG00000020402-9489.105Heterocephalus_glaber_female
ENSRNOG00000009846Frg110076.744ENSHGLG00000001211-10078.682Heterocephalus_glaber_female
ENSRNOG00000009846Frg110091.860ENSHGLG00000005601FRG110093.023Heterocephalus_glaber_female
ENSRNOG00000009846Frg110091.473ENSHGLG00100016261-10092.636Heterocephalus_glaber_male
ENSRNOG00000009846Frg19986.381ENSHGLG00100021211-9987.549Heterocephalus_glaber_male
ENSRNOG00000009846Frg110077.132ENSHGLG00100010674-10079.070Heterocephalus_glaber_male
ENSRNOG00000009846Frg110073.643ENSHGLG00100015285-10073.256Heterocephalus_glaber_male
ENSRNOG00000009846Frg18671.749ENSHCOG00000000224frg19571.749Hippocampus_comes
ENSRNOG00000009846Frg110075.969ENSIPUG00000022716frg110075.969Ictalurus_punctatus
ENSRNOG00000009846Frg110095.736ENSSTOG00000002857-10095.736Ictidomys_tridecemlineatus
ENSRNOG00000009846Frg110095.349ENSJJAG00000020625Frg110095.349Jaculus_jaculus
ENSRNOG00000009846Frg110068.992ENSKMAG00000005841frg110068.992Kryptolebias_marmoratus
ENSRNOG00000009846Frg110068.992ENSLBEG00000001466frg110069.380Labrus_bergylta
ENSRNOG00000009846Frg110070.992ENSLACG00000010243frg110070.992Latimeria_chalumnae
ENSRNOG00000009846Frg110074.419ENSLOCG00000013868frg110075.969Lepisosteus_oculatus
ENSRNOG00000009846Frg110094.574ENSLAFG00000011191FRG110094.574Loxodonta_africana
ENSRNOG00000009846Frg110095.736ENSMFAG00000031178FRG110095.736Macaca_fascicularis
ENSRNOG00000009846Frg18384.651ENSMFAG00000042873-8984.651Macaca_fascicularis
ENSRNOG00000009846Frg17884.314ENSMMUG00000047496-8884.314Macaca_mulatta
ENSRNOG00000009846Frg110095.736ENSMMUG00000001824FRG110095.736Macaca_mulatta
ENSRNOG00000009846Frg19689.069ENSMNEG00000018620FRG110089.069Macaca_nemestrina
ENSRNOG00000009846Frg110095.736ENSMLEG00000028881FRG110095.736Mandrillus_leucophaeus
ENSRNOG00000009846Frg110070.155ENSMAMG00000012406frg110070.930Mastacembelus_armatus
ENSRNOG00000009846Frg110069.380ENSMZEG00005007549frg110070.155Maylandia_zebra
ENSRNOG00000009846Frg110084.884ENSMGAG00000011481-10083.721Meleagris_gallopavo
ENSRNOG00000009846Frg110098.062ENSMAUG00000000847Frg110098.062Mesocricetus_auratus
ENSRNOG00000009846Frg110096.512ENSMICG00000046816FRG110096.512Microcebus_murinus
ENSRNOG00000009846Frg110090.310ENSMOCG00000023000Frg110090.310Microtus_ochrogaster
ENSRNOG00000009846Frg18671.749ENSMMOG00000004008frg19471.749Mola_mola
ENSRNOG00000009846Frg110089.535ENSMODG00000019031-8789.535Monodelphis_domestica
ENSRNOG00000009846Frg110069.767ENSMALG00000018497frg110070.155Monopterus_albus
ENSRNOG00000009846Frg110098.450MGP_CAROLIEiJ_G0031006Frg110098.450Mus_caroli
ENSRNOG00000009846Frg110098.450ENSMUSG00000031590Frg110098.450Mus_musculus
ENSRNOG00000009846Frg110098.062MGP_PahariEiJ_G0021475Frg110098.062Mus_pahari
ENSRNOG00000009846Frg110098.062MGP_SPRETEiJ_G0032120Frg110098.062Mus_spretus
ENSRNOG00000009846Frg110096.124ENSMPUG00000017962FRG110096.124Mustela_putorius_furo
ENSRNOG00000009846Frg110094.961ENSMLUG00000023179FRG110094.186Myotis_lucifugus
ENSRNOG00000009846Frg110096.512ENSNGAG00000016411Frg110096.512Nannospalax_galili
ENSRNOG00000009846Frg18167.619ENSNBRG00000006806frg19565.728Neolamprologus_brichardi
ENSRNOG00000009846Frg17883.168ENSNLEG00000028874-9183.168Nomascus_leucogenys
ENSRNOG00000009846Frg110078.846ENSNLEG00000032333-10078.846Nomascus_leucogenys
ENSRNOG00000009846Frg17885.149ENSNLEG00000036059-8685.149Nomascus_leucogenys
ENSRNOG00000009846Frg110080.534ENSNLEG00000035849-10082.061Nomascus_leucogenys
ENSRNOG00000009846Frg110067.054ENSNLEG00000032846-10087.500Nomascus_leucogenys
ENSRNOG00000009846Frg110091.085ENSNLEG00000000930FRG110094.186Nomascus_leucogenys
ENSRNOG00000009846Frg15990.132ENSMEUG00000007509-5990.132Notamacropus_eugenii
ENSRNOG00000009846Frg110080.233ENSOPRG00000004722-10080.233Ochotona_princeps
ENSRNOG00000009846Frg110092.248ENSODEG00000006458-10093.411Octodon_degus
ENSRNOG00000009846Frg110070.930ENSODEG00000006953-10069.380Octodon_degus
ENSRNOG00000009846Frg110069.498ENSONIG00000010162frg110070.270Oreochromis_niloticus
ENSRNOG00000009846Frg16689.474ENSOANG00000005659-7689.474Ornithorhynchus_anatinus
ENSRNOG00000009846Frg110095.349ENSOCUG00000009038-10095.349Oryctolagus_cuniculus
ENSRNOG00000009846Frg19668.826ENSORLG00000008106frg18968.826Oryzias_latipes
ENSRNOG00000009846Frg110069.380ENSORLG00020014355frg110069.380Oryzias_latipes_hni
ENSRNOG00000009846Frg110069.380ENSORLG00015014159frg110069.380Oryzias_latipes_hsok
ENSRNOG00000009846Frg18468.664ENSOMEG00000002468frg18868.664Oryzias_melastigma
ENSRNOG00000009846Frg110094.961ENSOGAG00000005749-10094.961Otolemur_garnettii
ENSRNOG00000009846Frg110093.487ENSOARG00000008592FRG110093.487Ovis_aries
ENSRNOG00000009846Frg18493.519ENSPPAG00000043170-10093.519Pan_paniscus
ENSRNOG00000009846Frg19667.829ENSPPAG00000043174-10067.829Pan_paniscus
ENSRNOG00000009846Frg110091.473ENSPPRG00000019777-10092.636Panthera_pardus
ENSRNOG00000009846Frg110095.736ENSPPRG00000025003-10095.736Panthera_pardus
ENSRNOG00000009846Frg110091.860ENSPTIG00000006566-10093.023Panthera_tigris_altaica
ENSRNOG00000009846Frg110096.124ENSPTIG00000006588-10096.124Panthera_tigris_altaica
ENSRNOG00000009846Frg110095.736ENSPTRG00000016671-10095.736Pan_troglodytes
ENSRNOG00000009846Frg19673.896ENSPTRG00000044710-10073.494Pan_troglodytes
ENSRNOG00000009846Frg19671.888ENSPTRG00000050204-10071.486Pan_troglodytes
ENSRNOG00000009846Frg19574.694ENSPTRG00000052363-9490.099Pan_troglodytes
ENSRNOG00000009846Frg18978.355ENSPTRG00000043123-9478.541Pan_troglodytes
ENSRNOG00000009846Frg110095.736ENSPTRG00000050205-10095.736Pan_troglodytes
ENSRNOG00000009846Frg17087.222ENSPANG00000031530-8487.222Papio_anubis
ENSRNOG00000009846Frg110072.093ENSPKIG00000024189frg110072.093Paramormyrops_kingsleyae
ENSRNOG00000009846Frg18485.648ENSPSIG00000017971-8285.648Pelodiscus_sinensis
ENSRNOG00000009846Frg19866.667ENSPMGG00000019273frg110066.667Periophthalmus_magnuspinnatus
ENSRNOG00000009846Frg110097.674ENSPEMG00000000650Frg110097.674Peromyscus_maniculatus_bairdii
ENSRNOG00000009846Frg110088.372ENSPCIG00000007530-6988.372Phascolarctos_cinereus
ENSRNOG00000009846Frg110070.270ENSPFOG00000006721frg110070.270Poecilia_formosa
ENSRNOG00000009846Frg110069.380ENSPMEG00000013816frg110067.442Poecilia_mexicana
ENSRNOG00000009846Frg110070.155ENSPREG00000000097frg110067.054Poecilia_reticulata
ENSRNOG00000009846Frg16187.975ENSPPYG00000011275-8787.975Pongo_abelii
ENSRNOG00000009846Frg15691.724ENSPPYG00000029810-10091.724Pongo_abelii
ENSRNOG00000009846Frg19590.244ENSPCAG00000014953-10090.244Procavia_capensis
ENSRNOG00000009846Frg110065.891ENSPCOG00000022726FRG110065.891Propithecus_coquereli
ENSRNOG00000009846Frg110080.620ENSPVAG00000010551FRG110080.620Pteropus_vampyrus
ENSRNOG00000009846Frg16673.099ENSPNYG00000015209frg17473.099Pundamilia_nyererei
ENSRNOG00000009846Frg110070.930ENSPNAG00000013259frg110070.155Pygocentrus_nattereri
ENSRNOG00000009846Frg18794.222ENSRBIG00000042219-9494.222Rhinopithecus_bieti
ENSRNOG00000009846Frg110092.636ENSRROG00000015523FRG110092.636Rhinopithecus_roxellana
ENSRNOG00000009846Frg18387.793ENSRROG00000032084-9484.615Rhinopithecus_roxellana
ENSRNOG00000009846Frg110092.636ENSSBOG00000034175FRG110093.798Saimiri_boliviensis_boliviensis
ENSRNOG00000009846Frg110089.535ENSSHAG00000005886-10089.535Sarcophilus_harrisii
ENSRNOG00000009846Frg19771.600ENSSFOG00015021361frg19972.800Scleropages_formosus
ENSRNOG00000009846Frg110067.829ENSSMAG00000001213frg110068.217Scophthalmus_maximus
ENSRNOG00000009846Frg110069.380ENSSDUG00000018886frg110070.155Seriola_dumerili
ENSRNOG00000009846Frg110069.380ENSSLDG00000024191frg110069.380Seriola_lalandi_dorsalis
ENSRNOG00000009846Frg16692.982ENSSARG00000002471-9493.220Sorex_araneus
ENSRNOG00000009846Frg110078.295ENSSPUG00000017326-9682.857Sphenodon_punctatus
ENSRNOG00000009846Frg110067.442ENSSPAG00000013294frg110067.054Stegastes_partitus
ENSRNOG00000009846Frg110095.349ENSSSCG00000006996FRG110095.349Sus_scrofa
ENSRNOG00000009846Frg110083.333ENSTGUG00000007028-10083.333Taeniopygia_guttata
ENSRNOG00000009846Frg110069.767ENSTRUG00000016208frg110069.767Takifugu_rubripes
ENSRNOG00000009846Frg110069.380ENSTNIG00000007128frg110070.155Tetraodon_nigroviridis
ENSRNOG00000009846Frg18366.197ENSTBEG00000012789-10066.197Tupaia_belangeri
ENSRNOG00000009846Frg110094.574ENSTBEG00000014491-10094.574Tupaia_belangeri
ENSRNOG00000009846Frg17759.296ENSTBEG00000017605-9959.296Tupaia_belangeri
ENSRNOG00000009846Frg110095.736ENSTTRG00000003429FRG110095.736Tursiops_truncatus
ENSRNOG00000009846Frg19687.449ENSUAMG00000012123-10087.045Ursus_americanus
ENSRNOG00000009846Frg110096.124ENSUMAG00000021119FRG110096.124Ursus_maritimus
ENSRNOG00000009846Frg18795.111ENSVPAG00000011977-9595.133Vicugna_pacos
ENSRNOG00000009846Frg110093.023ENSVPAG00000000616FRG110093.023Vicugna_pacos
ENSRNOG00000009846Frg18396.244ENSVVUG00000007181-7796.244Vulpes_vulpes
ENSRNOG00000009846Frg110078.295ENSXETG00000012470frg110077.907Xenopus_tropicalis
ENSRNOG00000009846Frg110064.341ENSXCOG00000005312frg110064.341Xiphophorus_couchianus
ENSRNOG00000009846Frg110068.605ENSXMAG00000007751frg110066.667Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0005730nucleolus21873635.IBAComponent
GO:0051015actin filament binding21873635.IBAFunction
GO:0055120striated muscle dense body21873635.IBAComponent
GO:0071013catalytic step 2 spliceosome21873635.IBAComponent
GO:0071013catalytic step 2 spliceosome-ISOComponent

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us