EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000009857 (Gene tree)
Gene ID: 303608
Gene Symbol: Ftsj3
Alias: LOC303608
Full Name: FtsJ RNA methyltransferase homolog 3
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 6427 bases
Position: chr10:94439077-94445503
Accession: 1307110
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000013295	FtsJ	PF01728.19	7.3e-56	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000013295	-	2853	-	ENSRNOP00000013295	829 (aa)	-	Q5RJT2

Gene Model

Click here to download ENSRNOG00000009857's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000009857's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000009857	Ftsj3	99	85.252	ENSG00000108592	FTSJ3	100	100.000	Homo_sapiens
ENSRNOG00000009857	Ftsj3	72	69.750	ENSAPOG00000005543	ftsj3	88	67.431	Acanthochromis_polyacanthus
ENSRNOG00000009857	Ftsj3	100	87.351	ENSAMEG00000003148	FTSJ3	100	87.843	Ailuropoda_melanoleuca
ENSRNOG00000009857	Ftsj3	99	60.476	ENSAOCG00000023196	ftsj3	97	62.336	Amphiprion_ocellaris
ENSRNOG00000009857	Ftsj3	99	60.357	ENSAPEG00000004250	ftsj3	98	62.262	Amphiprion_percula
ENSRNOG00000009857	Ftsj3	91	59.897	ENSATEG00000010069	ftsj3	97	60.285	Anabas_testudineus
ENSRNOG00000009857	Ftsj3	92	61.488	ENSAPLG00000010362	-	100	61.776	Anas_platyrhynchos
ENSRNOG00000009857	Ftsj3	88	63.601	ENSACAG00000017930	FTSJ3	100	64.550	Anolis_carolinensis
ENSRNOG00000009857	Ftsj3	99	86.128	ENSANAG00000033774	FTSJ3	100	86.580	Aotus_nancymaae
ENSRNOG00000009857	Ftsj3	85	69.663	ENSACLG00000019137	ftsj3	97	69.663	Astatotilapia_calliptera
ENSRNOG00000009857	Ftsj3	99	61.474	ENSAMXG00000021571	ftsj3	95	61.831	Astyanax_mexicanus
ENSRNOG00000009857	Ftsj3	99	87.394	ENSBTAG00000021060	FTSJ3	100	87.232	Bos_taurus
ENSRNOG00000009857	Ftsj3	99	40.672	WBGene00019168	H06I04.3	100	39.844	Caenorhabditis_elegans
ENSRNOG00000009857	Ftsj3	99	85.145	ENSCJAG00000019631	FTSJ3	100	84.863	Callithrix_jacchus
ENSRNOG00000009857	Ftsj3	100	86.358	ENSCAFG00000012770	FTSJ3	100	86.786	Canis_familiaris
ENSRNOG00000009857	Ftsj3	100	87.143	ENSCAFG00020026630	FTSJ3	100	87.455	Canis_lupus_dingo
ENSRNOG00000009857	Ftsj3	99	88.020	ENSCHIG00000025676	FTSJ3	100	87.244	Capra_hircus
ENSRNOG00000009857	Ftsj3	95	81.328	ENSTSYG00000001393	FTSJ3	99	80.673	Carlito_syrichta
ENSRNOG00000009857	Ftsj3	71	81.818	ENSCAPG00000016654	FTSJ3	84	98.630	Cavia_aperea
ENSRNOG00000009857	Ftsj3	99	87.183	ENSCPOG00000011384	FTSJ3	100	87.381	Cavia_porcellus
ENSRNOG00000009857	Ftsj3	99	85.645	ENSCCAG00000023533	-	97	90.152	Cebus_capucinus
ENSRNOG00000009857	Ftsj3	99	84.809	ENSCATG00000018510	FTSJ3	100	84.515	Cercocebus_atys
ENSRNOG00000009857	Ftsj3	99	88.242	ENSCLAG00000003222	FTSJ3	100	87.947	Chinchilla_lanigera
ENSRNOG00000009857	Ftsj3	100	84.988	ENSCSAG00000003921	FTSJ3	100	84.698	Chlorocebus_sabaeus
ENSRNOG00000009857	Ftsj3	100	69.231	ENSCPBG00000010032	FTSJ3	93	78.873	Chrysemys_picta_bellii
ENSRNOG00000009857	Ftsj3	58	57.980	ENSCSAVG00000003607	-	98	41.827	Ciona_savignyi
ENSRNOG00000009857	Ftsj3	99	85.834	ENSCANG00000042921	FTSJ3	100	85.053	Colobus_angolensis_palliatus
ENSRNOG00000009857	Ftsj3	99	91.636	ENSCGRG00001018068	FTSJ3	100	90.811	Cricetulus_griseus_chok1gshd
ENSRNOG00000009857	Ftsj3	99	91.636	ENSCGRG00000010648	FTSJ3	100	90.811	Cricetulus_griseus_crigri
ENSRNOG00000009857	Ftsj3	99	62.012	ENSCSEG00000013468	ftsj3	96	59.719	Cynoglossus_semilaevis
ENSRNOG00000009857	Ftsj3	99	63.070	ENSCVAG00000007484	ftsj3	98	62.919	Cyprinodon_variegatus
ENSRNOG00000009857	Ftsj3	99	62.201	ENSDARG00000104938	ftsj3	98	62.336	Danio_rerio
ENSRNOG00000009857	Ftsj3	100	82.568	ENSDNOG00000002392	FTSJ3	100	84.179	Dasypus_novemcinctus
ENSRNOG00000009857	Ftsj3	99	90.279	ENSDORG00000004200	Ftsj3	100	89.568	Dipodomys_ordii
ENSRNOG00000009857	Ftsj3	99	40.585	FBgn0030720	CG8939	67	42.218	Drosophila_melanogaster
ENSRNOG00000009857	Ftsj3	100	82.429	ENSETEG00000019228	FTSJ3	100	82.506	Echinops_telfairi
ENSRNOG00000009857	Ftsj3	99	51.870	ENSEBUG00000007828	ftsj3	97	51.570	Eptatretus_burgeri
ENSRNOG00000009857	Ftsj3	100	86.817	ENSEASG00005013565	FTSJ3	100	86.936	Equus_asinus_asinus
ENSRNOG00000009857	Ftsj3	100	86.595	ENSECAG00000011995	FTSJ3	100	87.189	Equus_caballus
ENSRNOG00000009857	Ftsj3	99	60.870	ENSELUG00000013501	ftsj3	96	60.353	Esox_lucius
ENSRNOG00000009857	Ftsj3	100	85.800	ENSFCAG00000013983	FTSJ3	100	86.277	Felis_catus
ENSRNOG00000009857	Ftsj3	99	68.660	ENSFALG00000013635	FTSJ3	100	68.514	Ficedula_albicollis
ENSRNOG00000009857	Ftsj3	99	86.529	ENSFDAG00000010274	FTSJ3	100	87.232	Fukomys_damarensis
ENSRNOG00000009857	Ftsj3	99	63.278	ENSFHEG00000007639	ftsj3	98	63.234	Fundulus_heteroclitus
ENSRNOG00000009857	Ftsj3	51	70.776	ENSGMOG00000017184	ftsj3	100	69.794	Gadus_morhua
ENSRNOG00000009857	Ftsj3	99	68.966	ENSGALG00000032993	FTSJ3	100	70.082	Gallus_gallus
ENSRNOG00000009857	Ftsj3	51	72.600	ENSGACG00000009841	ftsj3	100	71.663	Gasterosteus_aculeatus
ENSRNOG00000009857	Ftsj3	100	70.273	ENSGAGG00000006236	FTSJ3	100	70.083	Gopherus_agassizii
ENSRNOG00000009857	Ftsj3	99	86.024	ENSGGOG00000006794	FTSJ3	100	86.002	Gorilla_gorilla
ENSRNOG00000009857	Ftsj3	99	62.426	ENSHBUG00000022331	ftsj3	97	62.156	Haplochromis_burtoni
ENSRNOG00000009857	Ftsj3	99	88.335	ENSHGLG00000012282	FTSJ3	100	87.933	Heterocephalus_glaber_female
ENSRNOG00000009857	Ftsj3	99	88.335	ENSHGLG00100003578	FTSJ3	100	87.933	Heterocephalus_glaber_male
ENSRNOG00000009857	Ftsj3	99	62.485	ENSHCOG00000018770	ftsj3	97	61.712	Hippocampus_comes
ENSRNOG00000009857	Ftsj3	99	62.007	ENSIPUG00000024942	ftsj3	95	62.738	Ictalurus_punctatus
ENSRNOG00000009857	Ftsj3	99	87.455	ENSSTOG00000021265	FTSJ3	100	87.128	Ictidomys_tridecemlineatus
ENSRNOG00000009857	Ftsj3	99	88.889	ENSJJAG00000012822	Ftsj3	100	87.861	Jaculus_jaculus
ENSRNOG00000009857	Ftsj3	99	62.692	ENSKMAG00000021997	ftsj3	97	63.070	Kryptolebias_marmoratus
ENSRNOG00000009857	Ftsj3	99	62.172	ENSLBEG00000027142	ftsj3	97	61.529	Labrus_bergylta
ENSRNOG00000009857	Ftsj3	82	50.498	ENSLACG00000005523	FTSJ3	99	50.071	Latimeria_chalumnae
ENSRNOG00000009857	Ftsj3	99	62.633	ENSLOCG00000008979	ftsj3	99	63.443	Lepisosteus_oculatus
ENSRNOG00000009857	Ftsj3	100	84.479	ENSLAFG00000003252	FTSJ3	100	86.137	Loxodonta_africana
ENSRNOG00000009857	Ftsj3	99	85.012	ENSMFAG00000003764	FTSJ3	100	84.716	Macaca_fascicularis
ENSRNOG00000009857	Ftsj3	99	81.576	ENSMMUG00000016768	FTSJ3	100	80.907	Macaca_mulatta
ENSRNOG00000009857	Ftsj3	99	84.790	ENSMNEG00000029254	FTSJ3	100	84.615	Macaca_nemestrina
ENSRNOG00000009857	Ftsj3	99	85.252	ENSMLEG00000029091	FTSJ3	100	85.242	Mandrillus_leucophaeus
ENSRNOG00000009857	Ftsj3	99	62.619	ENSMZEG00005001992	ftsj3	97	63.234	Maylandia_zebra
ENSRNOG00000009857	Ftsj3	67	72.134	ENSMGAG00000000953	FTSJ3	100	64.834	Meleagris_gallopavo
ENSRNOG00000009857	Ftsj3	99	91.030	ENSMAUG00000015688	Ftsj3	100	90.573	Mesocricetus_auratus
ENSRNOG00000009857	Ftsj3	99	88.015	ENSMICG00000045996	FTSJ3	100	88.081	Microcebus_murinus
ENSRNOG00000009857	Ftsj3	100	92.178	ENSMOCG00000017809	Ftsj3	100	91.817	Microtus_ochrogaster
ENSRNOG00000009857	Ftsj3	99	59.574	ENSMMOG00000019522	ftsj3	90	59.620	Mola_mola
ENSRNOG00000009857	Ftsj3	100	77.059	ENSMODG00000009901	FTSJ3	100	78.571	Monodelphis_domestica
ENSRNOG00000009857	Ftsj3	100	95.823	MGP_CAROLIEiJ_G0017315	Ftsj3	100	95.823	Mus_caroli
ENSRNOG00000009857	Ftsj3	99	95.642	ENSMUSG00000020706	Ftsj3	100	94.875	Mus_musculus
ENSRNOG00000009857	Ftsj3	100	95.948	MGP_PahariEiJ_G0018445	Ftsj3	100	95.948	Mus_pahari
ENSRNOG00000009857	Ftsj3	99	94.660	MGP_SPRETEiJ_G0018159	Ftsj3	100	94.265	Mus_spretus
ENSRNOG00000009857	Ftsj3	100	86.580	ENSMPUG00000014911	FTSJ3	100	86.293	Mustela_putorius_furo
ENSRNOG00000009857	Ftsj3	100	86.429	ENSMLUG00000011667	FTSJ3	100	86.548	Myotis_lucifugus
ENSRNOG00000009857	Ftsj3	99	90.832	ENSNGAG00000005899	Ftsj3	100	90.107	Nannospalax_galili
ENSRNOG00000009857	Ftsj3	86	70.270	ENSNBRG00000017453	ftsj3	98	70.270	Neolamprologus_brichardi
ENSRNOG00000009857	Ftsj3	99	86.161	ENSNLEG00000004188	FTSJ3	100	85.867	Nomascus_leucogenys
ENSRNOG00000009857	Ftsj3	100	72.995	ENSMEUG00000013252	FTSJ3	99	73.897	Notamacropus_eugenii
ENSRNOG00000009857	Ftsj3	99	86.457	ENSOPRG00000014985	FTSJ3	100	85.748	Ochotona_princeps
ENSRNOG00000009857	Ftsj3	100	87.112	ENSODEG00000008167	FTSJ3	100	85.902	Octodon_degus
ENSRNOG00000009857	Ftsj3	99	62.500	ENSONIG00000001654	ftsj3	97	62.994	Oreochromis_niloticus
ENSRNOG00000009857	Ftsj3	100	86.548	ENSOCUG00000004319	FTSJ3	100	84.863	Oryctolagus_cuniculus
ENSRNOG00000009857	Ftsj3	99	61.796	ENSORLG00000005910	ftsj3	97	61.684	Oryzias_latipes
ENSRNOG00000009857	Ftsj3	99	60.186	ENSORLG00020021255	ftsj3	90	71.978	Oryzias_latipes_hni
ENSRNOG00000009857	Ftsj3	99	60.023	ENSORLG00015018416	ftsj3	97	62.633	Oryzias_latipes_hsok
ENSRNOG00000009857	Ftsj3	99	61.210	ENSOMEG00000014432	ftsj3	97	61.447	Oryzias_melastigma
ENSRNOG00000009857	Ftsj3	100	87.039	ENSOGAG00000032479	FTSJ3	100	87.396	Otolemur_garnettii
ENSRNOG00000009857	Ftsj3	99	87.515	ENSOARG00000013637	FTSJ3	100	87.112	Ovis_aries
ENSRNOG00000009857	Ftsj3	99	86.194	ENSPPAG00000027297	FTSJ3	100	86.407	Pan_paniscus
ENSRNOG00000009857	Ftsj3	100	85.322	ENSPPRG00000003042	FTSJ3	100	86.277	Panthera_pardus
ENSRNOG00000009857	Ftsj3	100	84.899	ENSPTIG00000012576	FTSJ3	100	85.969	Panthera_tigris_altaica
ENSRNOG00000009857	Ftsj3	99	85.492	ENSPTRG00000009524	FTSJ3	100	85.950	Pan_troglodytes
ENSRNOG00000009857	Ftsj3	99	85.012	ENSPANG00000020978	FTSJ3	100	84.716	Papio_anubis
ENSRNOG00000009857	Ftsj3	98	62.936	ENSPKIG00000012838	ftsj3	97	63.101	Paramormyrops_kingsleyae
ENSRNOG00000009857	Ftsj3	60	80.851	ENSPSIG00000004632	FTSJ3	70	81.553	Pelodiscus_sinensis
ENSRNOG00000009857	Ftsj3	88	66.667	ENSPMGG00000012959	ftsj3	99	53.920	Periophthalmus_magnuspinnatus
ENSRNOG00000009857	Ftsj3	99	93.399	ENSPEMG00000000248	Ftsj3	100	92.771	Peromyscus_maniculatus_bairdii
ENSRNOG00000009857	Ftsj3	100	78.214	ENSPCIG00000009088	FTSJ3	99	78.214	Phascolarctos_cinereus
ENSRNOG00000009857	Ftsj3	99	61.684	ENSPFOG00000023101	ftsj3	98	62.159	Poecilia_formosa
ENSRNOG00000009857	Ftsj3	99	61.566	ENSPLAG00000003846	ftsj3	98	62.040	Poecilia_latipinna
ENSRNOG00000009857	Ftsj3	99	61.803	ENSPMEG00000012692	ftsj3	98	62.278	Poecilia_mexicana
ENSRNOG00000009857	Ftsj3	99	60.967	ENSPREG00000014874	ftsj3	98	60.706	Poecilia_reticulata
ENSRNOG00000009857	Ftsj3	99	85.230	ENSPPYG00000008532	FTSJ3	100	84.744	Pongo_abelii
ENSRNOG00000009857	Ftsj3	99	84.940	ENSPCAG00000002560	FTSJ3	99	84.819	Procavia_capensis
ENSRNOG00000009857	Ftsj3	99	87.214	ENSPCOG00000023921	FTSJ3	100	86.770	Propithecus_coquereli
ENSRNOG00000009857	Ftsj3	100	86.223	ENSPVAG00000000162	FTSJ3	100	86.342	Pteropus_vampyrus
ENSRNOG00000009857	Ftsj3	86	69.173	ENSPNYG00000005108	ftsj3	97	70.270	Pundamilia_nyererei
ENSRNOG00000009857	Ftsj3	95	59.902	ENSPNAG00000022474	ftsj3	95	60.510	Pygocentrus_nattereri
ENSRNOG00000009857	Ftsj3	99	85.337	ENSRBIG00000039259	FTSJ3	100	84.798	Rhinopithecus_bieti
ENSRNOG00000009857	Ftsj3	99	85.319	ENSRROG00000045002	FTSJ3	100	84.780	Rhinopithecus_roxellana
ENSRNOG00000009857	Ftsj3	55	42.644	YCL054W	-	64	38.556	Saccharomyces_cerevisiae
ENSRNOG00000009857	Ftsj3	99	85.096	ENSSBOG00000031794	FTSJ3	92	85.645	Saimiri_boliviensis_boliviensis
ENSRNOG00000009857	Ftsj3	100	77.910	ENSSHAG00000013062	FTSJ3	100	78.214	Sarcophilus_harrisii
ENSRNOG00000009857	Ftsj3	66	66.071	ENSSFOG00015018053	ftsj3	97	62.322	Scleropages_formosus
ENSRNOG00000009857	Ftsj3	66	63.441	ENSSMAG00000002863	ftsj3	96	61.171	Scophthalmus_maximus
ENSRNOG00000009857	Ftsj3	99	62.352	ENSSDUG00000003385	ftsj3	96	62.426	Seriola_dumerili
ENSRNOG00000009857	Ftsj3	99	62.963	ENSSLDG00000017970	ftsj3	96	62.888	Seriola_lalandi_dorsalis
ENSRNOG00000009857	Ftsj3	92	69.201	ENSSPUG00000012959	FTSJ3	99	69.181	Sphenodon_punctatus
ENSRNOG00000009857	Ftsj3	99	59.412	ENSSPAG00000002390	ftsj3	97	61.831	Stegastes_partitus
ENSRNOG00000009857	Ftsj3	99	86.699	ENSSSCG00000017288	FTSJ3	100	86.905	Sus_scrofa
ENSRNOG00000009857	Ftsj3	99	61.483	ENSTRUG00000017550	ftsj3	89	69.399	Takifugu_rubripes
ENSRNOG00000009857	Ftsj3	99	61.198	ENSTNIG00000015549	ftsj3	99	61.871	Tetraodon_nigroviridis
ENSRNOG00000009857	Ftsj3	99	80.802	ENSTBEG00000010295	FTSJ3	100	80.981	Tupaia_belangeri
ENSRNOG00000009857	Ftsj3	99	86.972	ENSTTRG00000006973	FTSJ3	100	86.786	Tursiops_truncatus
ENSRNOG00000009857	Ftsj3	82	99.254	ENSUAMG00000007332	FTSJ3	96	99.254	Ursus_americanus
ENSRNOG00000009857	Ftsj3	100	87.112	ENSUMAG00000017450	FTSJ3	100	87.589	Ursus_maritimus
ENSRNOG00000009857	Ftsj3	100	87.262	ENSVVUG00000006106	FTSJ3	100	87.575	Vulpes_vulpes
ENSRNOG00000009857	Ftsj3	96	59.498	ENSXETG00000006939	ftsj3	99	58.604	Xenopus_tropicalis
ENSRNOG00000009857	Ftsj3	85	69.780	ENSXCOG00000002999	ftsj3	90	68.085	Xiphophorus_couchianus
ENSRNOG00000009857	Ftsj3	99	60.808	ENSXMAG00000018139	ftsj3	97	61.502	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000453	enzyme-directed rRNA 2'-O-methylation	-	IEA	Process
GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0000466	maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0008650	rRNA (uridine-2'-O-)-methyltransferase activity	21873635.	IBA	Function
GO:0016435	rRNA (guanine) methyltransferase activity	21873635.	IBA	Function
GO:0030687	preribosome, large subunit precursor	21873635.	IBA	Component
GO:0030688	preribosome, small subunit precursor	-	IEA	Component
GO:0031167	rRNA methylation	21873635.	IBA	Process