EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000009977 (Gene tree)
Gene ID: 313591
Gene Symbol: Thrap3
Alias: LOC313591|MGC94882
Full Name: thyroid hormone receptor associated protein 3
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 42241 bases
Position: chr5:144179023-144221263
Accession: 1306129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000013570	THRAP3_BCLAF1	PF15440.6	4.6e-203	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000013570	-	3561	XM_006238866	ENSRNOP00000013570	951 (aa)	XP_006238928	Q5M7V8

Gene Model

Click here to download ENSRNOG00000009977's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000009977's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000009977	Thrap3	94	92.810	ENSG00000054118	THRAP3	94	92.810	Homo_sapiens
ENSRNOG00000009977	Thrap3	52	56.977	ENSAPOG00000001848	thrap3b	54	60.714	Acanthochromis_polyacanthus
ENSRNOG00000009977	Thrap3	94	91.796	ENSAMEG00000000379	THRAP3	94	91.796	Ailuropoda_melanoleuca
ENSRNOG00000009977	Thrap3	54	48.966	ENSAOCG00000015572	thrap3b	51	61.176	Amphiprion_ocellaris
ENSRNOG00000009977	Thrap3	54	48.966	ENSAPEG00000021862	thrap3b	51	61.176	Amphiprion_percula
ENSRNOG00000009977	Thrap3	94	80.175	ENSAPLG00000009009	THRAP3	94	80.328	Anas_platyrhynchos
ENSRNOG00000009977	Thrap3	94	92.257	ENSANAG00000024479	-	94	92.257	Aotus_nancymaae
ENSRNOG00000009977	Thrap3	94	87.196	ENSANAG00000023367	-	94	86.865	Aotus_nancymaae
ENSRNOG00000009977	Thrap3	94	93.134	ENSBTAG00000024095	THRAP3	94	93.134	Bos_taurus
ENSRNOG00000009977	Thrap3	94	92.367	ENSCJAG00000001754	THRAP3	94	92.367	Callithrix_jacchus
ENSRNOG00000009977	Thrap3	94	92.248	ENSCAFG00000003389	THRAP3	94	92.470	Canis_familiaris
ENSRNOG00000009977	Thrap3	94	92.248	ENSCAFG00020008982	THRAP3	94	92.470	Canis_lupus_dingo
ENSRNOG00000009977	Thrap3	94	92.913	ENSCHIG00000022784	THRAP3	94	92.913	Capra_hircus
ENSRNOG00000009977	Thrap3	96	76.035	ENSTSYG00000011370	-	83	75.228	Carlito_syrichta
ENSRNOG00000009977	Thrap3	94	92.920	ENSTSYG00000012214	-	96	92.920	Carlito_syrichta
ENSRNOG00000009977	Thrap3	94	92.770	ENSCPOG00000015742	THRAP3	94	92.102	Cavia_porcellus
ENSRNOG00000009977	Thrap3	94	92.588	ENSCCAG00000028401	THRAP3	94	92.588	Cebus_capucinus
ENSRNOG00000009977	Thrap3	97	64.179	ENSCATG00000035101	-	99	65.000	Cercocebus_atys
ENSRNOG00000009977	Thrap3	94	92.588	ENSCATG00000038343	-	94	92.588	Cercocebus_atys
ENSRNOG00000009977	Thrap3	94	94.216	ENSCLAG00000013043	THRAP3	94	94.216	Chinchilla_lanigera
ENSRNOG00000009977	Thrap3	94	92.257	ENSCSAG00000001098	THRAP3	94	92.257	Chlorocebus_sabaeus
ENSRNOG00000009977	Thrap3	74	100.000	ENSCHOG00000008973	THRAP3	80	100.000	Choloepus_hoffmanni
ENSRNOG00000009977	Thrap3	94	81.051	ENSCPBG00000018530	THRAP3	94	80.546	Chrysemys_picta_bellii
ENSRNOG00000009977	Thrap3	94	92.367	ENSCANG00000043028	THRAP3	94	92.367	Colobus_angolensis_palliatus
ENSRNOG00000009977	Thrap3	100	97.584	ENSCGRG00001003105	Thrap3	100	97.584	Cricetulus_griseus_chok1gshd
ENSRNOG00000009977	Thrap3	100	97.584	ENSCGRG00000017028	Thrap3	100	97.584	Cricetulus_griseus_crigri
ENSRNOG00000009977	Thrap3	94	90.044	ENSDNOG00000031470	THRAP3	94	89.602	Dasypus_novemcinctus
ENSRNOG00000009977	Thrap3	94	94.772	ENSDORG00000013216	Thrap3	94	94.772	Dipodomys_ordii
ENSRNOG00000009977	Thrap3	75	84.637	ENSETEG00000003542	THRAP3	93	84.637	Echinops_telfairi
ENSRNOG00000009977	Thrap3	94	91.916	ENSEASG00005012182	THRAP3	94	92.137	Equus_asinus_asinus
ENSRNOG00000009977	Thrap3	94	91.916	ENSECAG00000021207	THRAP3	94	92.137	Equus_caballus
ENSRNOG00000009977	Thrap3	65	93.166	ENSEEUG00000004939	THRAP3	76	93.166	Erinaceus_europaeus
ENSRNOG00000009977	Thrap3	91	36.931	ENSELUG00000007499	thrap3b	67	37.846	Esox_lucius
ENSRNOG00000009977	Thrap3	93	40.373	ENSELUG00000017733	thrap3a	68	41.931	Esox_lucius
ENSRNOG00000009977	Thrap3	94	92.691	ENSFCAG00000014127	THRAP3	94	92.691	Felis_catus
ENSRNOG00000009977	Thrap3	94	74.017	ENSFALG00000000840	THRAP3	95	75.207	Ficedula_albicollis
ENSRNOG00000009977	Thrap3	94	94.098	ENSFDAG00000009011	THRAP3	94	94.432	Fukomys_damarensis
ENSRNOG00000009977	Thrap3	94	78.266	ENSGALG00000002144	THRAP3	94	79.628	Gallus_gallus
ENSRNOG00000009977	Thrap3	94	81.161	ENSGAGG00000024863	THRAP3	94	80.656	Gopherus_agassizii
ENSRNOG00000009977	Thrap3	94	92.699	ENSGGOG00000006917	THRAP3	94	92.699	Gorilla_gorilla
ENSRNOG00000009977	Thrap3	51	45.618	ENSHBUG00000009602	thrap3a	50	53.100	Haplochromis_burtoni
ENSRNOG00000009977	Thrap3	55	86.476	ENSHGLG00000015805	-	90	84.659	Heterocephalus_glaber_female
ENSRNOG00000009977	Thrap3	94	92.539	ENSHGLG00000019374	THRAP3	94	92.205	Heterocephalus_glaber_female
ENSRNOG00000009977	Thrap3	94	92.539	ENSHGLG00100007382	THRAP3	94	92.205	Heterocephalus_glaber_male
ENSRNOG00000009977	Thrap3	55	86.095	ENSHGLG00100015946	-	90	84.280	Heterocephalus_glaber_male
ENSRNOG00000009977	Thrap3	51	52.809	ENSHCOG00000004098	thrap3b	56	53.659	Hippocampus_comes
ENSRNOG00000009977	Thrap3	70	38.174	ENSIPUG00000005707	thrap3b	68	39.216	Ictalurus_punctatus
ENSRNOG00000009977	Thrap3	94	94.111	ENSSTOG00000000602	THRAP3	94	94.111	Ictidomys_tridecemlineatus
ENSRNOG00000009977	Thrap3	53	51.079	ENSKMAG00000012105	thrap3b	52	61.458	Kryptolebias_marmoratus
ENSRNOG00000009977	Thrap3	92	32.941	ENSKMAG00000005707	thrap3a	75	35.778	Kryptolebias_marmoratus
ENSRNOG00000009977	Thrap3	94	92.257	ENSLAFG00000009587	THRAP3	94	92.257	Loxodonta_africana
ENSRNOG00000009977	Thrap3	97	63.883	ENSMFAG00000045419	-	83	63.007	Macaca_fascicularis
ENSRNOG00000009977	Thrap3	94	92.588	ENSMFAG00000040144	-	94	92.588	Macaca_fascicularis
ENSRNOG00000009977	Thrap3	94	92.588	ENSMMUG00000014622	THRAP3	94	92.588	Macaca_mulatta
ENSRNOG00000009977	Thrap3	97	64.139	ENSMNEG00000042630	-	99	66.853	Macaca_nemestrina
ENSRNOG00000009977	Thrap3	94	87.733	ENSMNEG00000018987	-	94	87.733	Macaca_nemestrina
ENSRNOG00000009977	Thrap3	94	92.588	ENSMLEG00000028924	THRAP3	94	92.588	Mandrillus_leucophaeus
ENSRNOG00000009977	Thrap3	81	79.412	ENSMGAG00000003640	THRAP3	93	79.337	Meleagris_gallopavo
ENSRNOG00000009977	Thrap3	100	97.479	ENSMAUG00000019723	Thrap3	100	97.479	Mesocricetus_auratus
ENSRNOG00000009977	Thrap3	94	92.588	ENSMICG00000007920	-	94	92.588	Microcebus_murinus
ENSRNOG00000009977	Thrap3	91	89.384	ENSMICG00000042555	-	89	89.384	Microcebus_murinus
ENSRNOG00000009977	Thrap3	94	88.085	ENSMOCG00000004435	-	94	87.751	Microtus_ochrogaster
ENSRNOG00000009977	Thrap3	94	79.088	ENSMOCG00000006712	-	83	79.740	Microtus_ochrogaster
ENSRNOG00000009977	Thrap3	100	96.744	ENSMOCG00000005500	-	100	96.744	Microtus_ochrogaster
ENSRNOG00000009977	Thrap3	94	75.246	ENSMODG00000017834	-	99	74.151	Monodelphis_domestica
ENSRNOG00000009977	Thrap3	65	38.401	MGP_CAROLIEiJ_G0015157	Bclaf1	79	34.943	Mus_caroli
ENSRNOG00000009977	Thrap3	100	98.212	ENSMUSG00000043962	Thrap3	100	98.212	Mus_musculus
ENSRNOG00000009977	Thrap3	100	98.528	MGP_PahariEiJ_G0028802	-	100	98.528	Mus_pahari
ENSRNOG00000009977	Thrap3	94	92.070	MGP_SPRETEiJ_G0027450	Thrap3	100	96.078	Mus_spretus
ENSRNOG00000009977	Thrap3	94	91.251	ENSMPUG00000014809	THRAP3	94	91.473	Mustela_putorius_furo
ENSRNOG00000009977	Thrap3	94	91.898	ENSMLUG00000006447	THRAP3	94	92.120	Myotis_lucifugus
ENSRNOG00000009977	Thrap3	94	95.106	ENSNGAG00000010876	Thrap3	94	95.106	Nannospalax_galili
ENSRNOG00000009977	Thrap3	94	92.367	ENSNLEG00000011359	THRAP3	94	92.367	Nomascus_leucogenys
ENSRNOG00000009977	Thrap3	87	89.531	ENSOPRG00000001637	THRAP3	94	89.049	Ochotona_princeps
ENSRNOG00000009977	Thrap3	71	78.550	ENSODEG00000010768	-	92	79.438	Octodon_degus
ENSRNOG00000009977	Thrap3	65	100.000	ENSODEG00000006090	-	77	100.000	Octodon_degus
ENSRNOG00000009977	Thrap3	94	85.414	ENSOANG00000002070	THRAP3	94	85.414	Ornithorhynchus_anatinus
ENSRNOG00000009977	Thrap3	94	92.257	ENSOCUG00000005323	THRAP3	94	92.257	Oryctolagus_cuniculus
ENSRNOG00000009977	Thrap3	94	87.706	ENSOGAG00000002648	THRAP3	94	88.398	Otolemur_garnettii
ENSRNOG00000009977	Thrap3	94	92.913	ENSOARG00000019668	THRAP3	94	92.913	Ovis_aries
ENSRNOG00000009977	Thrap3	94	92.810	ENSPPAG00000028961	THRAP3	94	92.810	Pan_paniscus
ENSRNOG00000009977	Thrap3	50	44.167	ENSPPAG00000031645	BCLAF1	53	47.179	Pan_paniscus
ENSRNOG00000009977	Thrap3	94	92.802	ENSPPRG00000001735	THRAP3	94	92.802	Panthera_pardus
ENSRNOG00000009977	Thrap3	94	92.802	ENSPTIG00000016888	THRAP3	94	92.802	Panthera_tigris_altaica
ENSRNOG00000009977	Thrap3	94	92.810	ENSPTRG00000000535	THRAP3	94	92.810	Pan_troglodytes
ENSRNOG00000009977	Thrap3	94	92.699	ENSPANG00000010532	THRAP3	94	92.699	Papio_anubis
ENSRNOG00000009977	Thrap3	75	44.709	ENSPKIG00000005150	thrap3a	77	45.695	Paramormyrops_kingsleyae
ENSRNOG00000009977	Thrap3	81	80.989	ENSPSIG00000010296	THRAP3	81	80.910	Pelodiscus_sinensis
ENSRNOG00000009977	Thrap3	100	96.954	ENSPEMG00000023512	-	100	96.954	Peromyscus_maniculatus_bairdii
ENSRNOG00000009977	Thrap3	92	87.159	ENSPEMG00000019304	-	97	86.667	Peromyscus_maniculatus_bairdii
ENSRNOG00000009977	Thrap3	94	84.279	ENSPCIG00000024805	THRAP3	94	83.624	Phascolarctos_cinereus
ENSRNOG00000009977	Thrap3	67	40.118	ENSPFOG00000000525	thrap3b	68	38.532	Poecilia_formosa
ENSRNOG00000009977	Thrap3	67	40.265	ENSPLAG00000016521	thrap3b	68	38.685	Poecilia_latipinna
ENSRNOG00000009977	Thrap3	92	32.378	ENSPREG00000005816	thrap3a	59	63.636	Poecilia_reticulata
ENSRNOG00000009977	Thrap3	59	87.566	ENSPPYG00000001544	-	99	87.391	Pongo_abelii
ENSRNOG00000009977	Thrap3	94	86.475	ENSPCAG00000008951	THRAP3	94	86.173	Procavia_capensis
ENSRNOG00000009977	Thrap3	94	92.588	ENSPCOG00000027521	THRAP3	94	92.588	Propithecus_coquereli
ENSRNOG00000009977	Thrap3	82	90.909	ENSPVAG00000008632	THRAP3	82	90.909	Pteropus_vampyrus
ENSRNOG00000009977	Thrap3	50	54.167	ENSPNYG00000003062	thrap3b	53	60.714	Pundamilia_nyererei
ENSRNOG00000009977	Thrap3	94	88.877	ENSRBIG00000031284	THRAP3	94	88.877	Rhinopithecus_bieti
ENSRNOG00000009977	Thrap3	94	92.367	ENSRROG00000028592	THRAP3	94	92.367	Rhinopithecus_roxellana
ENSRNOG00000009977	Thrap3	94	92.257	ENSSBOG00000029130	THRAP3	94	92.257	Saimiri_boliviensis_boliviensis
ENSRNOG00000009977	Thrap3	94	83.867	ENSSHAG00000017932	THRAP3	94	82.431	Sarcophilus_harrisii
ENSRNOG00000009977	Thrap3	67	47.025	ENSSFOG00015020057	thrap3	74	45.026	Scleropages_formosus
ENSRNOG00000009977	Thrap3	94	91.030	ENSSARG00000006424	THRAP3	94	91.030	Sorex_araneus
ENSRNOG00000009977	Thrap3	94	76.711	ENSSPUG00000001120	THRAP3	94	76.322	Sphenodon_punctatus
ENSRNOG00000009977	Thrap3	94	92.248	ENSSSCG00000029954	THRAP3	94	92.248	Sus_scrofa
ENSRNOG00000009977	Thrap3	94	79.670	ENSTGUG00000001606	THRAP3	94	80.154	Taeniopygia_guttata
ENSRNOG00000009977	Thrap3	95	34.836	ENSTRUG00000010702	thrap3a	51	59.155	Takifugu_rubripes
ENSRNOG00000009977	Thrap3	71	45.556	ENSTNIG00000012194	thrap3a	70	57.143	Tetraodon_nigroviridis
ENSRNOG00000009977	Thrap3	57	100.000	ENSTBEG00000016264	THRAP3	66	100.000	Tupaia_belangeri
ENSRNOG00000009977	Thrap3	94	92.248	ENSTTRG00000015101	THRAP3	94	92.470	Tursiops_truncatus
ENSRNOG00000009977	Thrap3	94	92.248	ENSUAMG00000015685	THRAP3	94	92.248	Ursus_americanus
ENSRNOG00000009977	Thrap3	94	92.248	ENSUMAG00000001744	THRAP3	94	92.248	Ursus_maritimus
ENSRNOG00000009977	Thrap3	87	85.783	ENSVPAG00000004656	THRAP3	94	86.024	Vicugna_pacos
ENSRNOG00000009977	Thrap3	94	92.137	ENSVVUG00000000118	THRAP3	94	92.359	Vulpes_vulpes
ENSRNOG00000009977	Thrap3	94	60.570	ENSXETG00000003925	thrap3	94	57.705	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	-	ISO	Process
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	-	ISS	Process
GO:0000956	nuclear-transcribed mRNA catabolic process	-	ISO	Process
GO:0000956	nuclear-transcribed mRNA catabolic process	-	ISS	Process
GO:0000980	RNA polymerase II distal enhancer sequence-specific DNA binding	-	ISO	Function
GO:0000980	RNA polymerase II distal enhancer sequence-specific DNA binding	-	ISS	Function
GO:0003712	transcription coregulator activity	-	ISO	Function
GO:0003713	transcription coactivator activity	-	ISO	Function
GO:0003713	transcription coactivator activity	-	ISS	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005634	nucleus	-	ISS	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005654	nucleoplasm	-	ISS	Component
GO:0006367	transcription initiation from RNA polymerase II promoter	-	IEA	Process
GO:0006367	transcription initiation from RNA polymerase II promoter	-	ISO	Process
GO:0006397	mRNA processing	-	IEA	Process
GO:0007623	circadian rhythm	-	IEA	Process
GO:0007623	circadian rhythm	-	ISO	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0016592	mediator complex	-	IEA	Component
GO:0016592	mediator complex	-	ISO	Component
GO:0016607	nuclear speck	-	ISO	Component
GO:0016607	nuclear speck	-	ISS	Component
GO:0030374	nuclear receptor transcription coactivator activity	-	IEA	Function
GO:0030374	nuclear receptor transcription coactivator activity	-	ISO	Function
GO:0035145	exon-exon junction complex	-	ISO	Component
GO:0035145	exon-exon junction complex	-	ISS	Component
GO:0042753	positive regulation of circadian rhythm	-	ISO	Process
GO:0042753	positive regulation of circadian rhythm	-	ISS	Process
GO:0045893	positive regulation of transcription, DNA-templated	-	ISO	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0046966	thyroid hormone receptor binding	-	IEA	Function
GO:0046966	thyroid hormone receptor binding	-	ISO	Function
GO:0048026	positive regulation of mRNA splicing, via spliceosome	-	ISO	Process
GO:0048026	positive regulation of mRNA splicing, via spliceosome	-	ISS	Process
GO:0048255	mRNA stabilization	-	ISO	Process
GO:0048255	mRNA stabilization	-	ISS	Process
GO:0051219	phosphoprotein binding	-	ISO	Function
GO:0051219	phosphoprotein binding	-	ISS	Function