EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000010007 (Gene tree)
Gene ID: 362612
Gene Symbol: Srsf4
Alias: LOC362612|RGD1561347|Sfrs4
Full Name: serine and arginine rich splicing factor 4
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 27767 bases
Position: chr5:150032999-150060765
Accession: 1561347
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000013301	RRM_1	PF00076.22	2.3e-31	1	2
ENSRNOP00000013301	RRM_1	PF00076.22	2.3e-31	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000013301	-	2205	-	ENSRNOP00000013301	488 (aa)	-	G3V798

Gene Model

Click here to download ENSRNOG00000010007's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03040	Spliceosome	KEGG
rno05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000010007's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000010007	Srsf4	92	85.120	ENSG00000116350	SRSF4	76	91.176	Homo_sapiens
ENSRNOG00000010007	Srsf4	92	82.035	ENSAMEG00000000594	SRSF4	60	95.349	Ailuropoda_melanoleuca
ENSRNOG00000010007	Srsf4	80	69.697	ENSAPLG00000006595	-	59	82.264	Anas_platyrhynchos
ENSRNOG00000010007	Srsf4	87	82.710	ENSANAG00000037134	SRSF4	73	96.346	Aotus_nancymaae
ENSRNOG00000010007	Srsf4	92	83.114	ENSBTAG00000013309	SRSF4	61	95.681	Bos_taurus
ENSRNOG00000010007	Srsf4	92	83.801	ENSCJAG00000047192	SRSF4	65	94.769	Callithrix_jacchus
ENSRNOG00000010007	Srsf4	85	80.562	ENSCAFG00000011669	SRSF4	57	93.358	Canis_familiaris
ENSRNOG00000010007	Srsf4	85	81.882	ENSCAFG00020023963	SRSF4	55	95.094	Canis_lupus_dingo
ENSRNOG00000010007	Srsf4	92	80.041	ENSCHIG00000022096	SRSF4	58	95.017	Capra_hircus
ENSRNOG00000010007	Srsf4	92	85.590	ENSTSYG00000007903	SRSF4	65	93.846	Carlito_syrichta
ENSRNOG00000010007	Srsf4	92	73.581	ENSCAPG00000014747	SRSF4	59	78.859	Cavia_aperea
ENSRNOG00000010007	Srsf4	92	78.065	ENSCPOG00000036234	SRSF4	60	88.372	Cavia_porcellus
ENSRNOG00000010007	Srsf4	67	78.235	ENSCCAG00000033585	SRSF4	53	91.584	Cebus_capucinus
ENSRNOG00000010007	Srsf4	92	85.558	ENSCATG00000031440	SRSF4	66	94.154	Cercocebus_atys
ENSRNOG00000010007	Srsf4	67	86.544	ENSCLAG00000009008	SRSF4	60	88.372	Chinchilla_lanigera
ENSRNOG00000010007	Srsf4	92	85.558	ENSCSAG00000001022	SRSF4	66	94.462	Chlorocebus_sabaeus
ENSRNOG00000010007	Srsf4	85	78.251	ENSCHOG00000013858	SRSF4	59	93.208	Choloepus_hoffmanni
ENSRNOG00000010007	Srsf4	69	86.647	ENSCPBG00000009020	SRSF4	60	92.359	Chrysemys_picta_bellii
ENSRNOG00000010007	Srsf4	92	85.558	ENSCANG00000028667	SRSF4	66	94.462	Colobus_angolensis_palliatus
ENSRNOG00000010007	Srsf4	92	92.544	ENSCGRG00001021115	Srsf4	92	90.265	Cricetulus_griseus_chok1gshd
ENSRNOG00000010007	Srsf4	85	91.905	ENSCGRG00000014137	Srsf4	92	87.648	Cricetulus_griseus_crigri
ENSRNOG00000010007	Srsf4	67	92.661	ENSDNOG00000047961	SRSF4	59	96.013	Dasypus_novemcinctus
ENSRNOG00000010007	Srsf4	92	63.895	ENSDORG00000002459	Srsf4	92	63.297	Dipodomys_ordii
ENSRNOG00000010007	Srsf4	79	100.000	ENSETEG00000009774	SRSF4	61	77.409	Echinops_telfairi
ENSRNOG00000010007	Srsf4	67	92.355	ENSEASG00005010168	SRSF4	60	95.681	Equus_asinus_asinus
ENSRNOG00000010007	Srsf4	67	92.355	ENSECAG00000021350	SRSF4	60	95.681	Equus_caballus
ENSRNOG00000010007	Srsf4	92	81.718	ENSEEUG00000008479	SRSF4	61	93.023	Erinaceus_europaeus
ENSRNOG00000010007	Srsf4	53	56.146	ENSELUG00000017551	srsf4	93	72.308	Esox_lucius
ENSRNOG00000010007	Srsf4	92	84.361	ENSFCAG00000027821	SRSF4	61	95.681	Felis_catus
ENSRNOG00000010007	Srsf4	87	70.794	ENSFALG00000001346	SRSF4	62	83.278	Ficedula_albicollis
ENSRNOG00000010007	Srsf4	61	80.872	ENSFDAG00000007332	SRSF4	57	85.660	Fukomys_damarensis
ENSRNOG00000010007	Srsf4	52	68.110	ENSFHEG00000007472	srsf4	90	86.905	Fundulus_heteroclitus
ENSRNOG00000010007	Srsf4	87	72.535	ENSGALG00000050314	SRSF4	63	83.721	Gallus_gallus
ENSRNOG00000010007	Srsf4	52	61.328	ENSGAFG00000018496	srsf4	65	76.796	Gambusia_affinis
ENSRNOG00000010007	Srsf4	58	94.014	ENSGAGG00000014836	SRSF4	60	92.359	Gopherus_agassizii
ENSRNOG00000010007	Srsf4	92	85.339	ENSGGOG00000002444	SRSF4	66	93.846	Gorilla_gorilla
ENSRNOG00000010007	Srsf4	95	82.051	ENSHGLG00000011842	SRSF4	91	81.818	Heterocephalus_glaber_female
ENSRNOG00000010007	Srsf4	95	82.051	ENSHGLG00100017279	SRSF4	91	81.818	Heterocephalus_glaber_male
ENSRNOG00000010007	Srsf4	92	83.736	ENSSTOG00000015908	SRSF4	65	92.879	Ictidomys_tridecemlineatus
ENSRNOG00000010007	Srsf4	92	70.961	ENSJJAG00000022153	Srsf4	65	76.161	Jaculus_jaculus
ENSRNOG00000010007	Srsf4	84	78.873	ENSLAFG00000002575	SRSF4	68	95.254	Loxodonta_africana
ENSRNOG00000010007	Srsf4	92	85.558	ENSMFAG00000041784	SRSF4	66	94.462	Macaca_fascicularis
ENSRNOG00000010007	Srsf4	85	84.323	ENSMMUG00000007110	SRSF4	60	93.772	Macaca_mulatta
ENSRNOG00000010007	Srsf4	92	85.558	ENSMNEG00000034931	SRSF4	66	94.462	Macaca_nemestrina
ENSRNOG00000010007	Srsf4	92	85.777	ENSMLEG00000031619	SRSF4	66	94.462	Mandrillus_leucophaeus
ENSRNOG00000010007	Srsf4	87	72.535	ENSMGAG00000002400	SRSF4	63	84.053	Meleagris_gallopavo
ENSRNOG00000010007	Srsf4	92	93.202	ENSMAUG00000021940	Srsf4	61	98.339	Mesocricetus_auratus
ENSRNOG00000010007	Srsf4	92	85.033	ENSMICG00000043567	SRSF4	60	97.010	Microcebus_murinus
ENSRNOG00000010007	Srsf4	92	93.654	ENSMOCG00000013319	Srsf4	92	89.716	Microtus_ochrogaster
ENSRNOG00000010007	Srsf4	54	65.530	ENSMMOG00000013653	srsf4	65	80.337	Mola_mola
ENSRNOG00000010007	Srsf4	62	93.355	ENSMODG00000011052	SRSF4	93	93.355	Monodelphis_domestica
ENSRNOG00000010007	Srsf4	92	95.186	MGP_CAROLIEiJ_G0026555	Srsf4	92	93.407	Mus_caroli
ENSRNOG00000010007	Srsf4	92	95.624	ENSMUSG00000028911	Srsf4	92	93.846	Mus_musculus
ENSRNOG00000010007	Srsf4	92	91.832	MGP_PahariEiJ_G0028887	Srsf4	92	94.702	Mus_pahari
ENSRNOG00000010007	Srsf4	92	93.450	MGP_SPRETEiJ_G0027535	Srsf4	92	92.982	Mus_spretus
ENSRNOG00000010007	Srsf4	67	92.049	ENSMPUG00000015470	SRSF4	60	96.013	Mustela_putorius_furo
ENSRNOG00000010007	Srsf4	59	96.154	ENSMLUG00000014770	SRSF4	59	95.302	Myotis_lucifugus
ENSRNOG00000010007	Srsf4	92	86.123	ENSNGAG00000012225	Srsf4	63	96.026	Nannospalax_galili
ENSRNOG00000010007	Srsf4	92	84.649	ENSNLEG00000009916	SRSF4	66	94.769	Nomascus_leucogenys
ENSRNOG00000010007	Srsf4	61	100.000	ENSMEUG00000003045	-	69	100.000	Notamacropus_eugenii
ENSRNOG00000010007	Srsf4	92	79.470	ENSOPRG00000010098	SRSF4	62	93.355	Ochotona_princeps
ENSRNOG00000010007	Srsf4	92	78.326	ENSODEG00000003230	SRSF4	60	88.040	Octodon_degus
ENSRNOG00000010007	Srsf4	65	92.523	ENSOCUG00000001837	SRSF4	61	95.380	Oryctolagus_cuniculus
ENSRNOG00000010007	Srsf4	92	84.396	ENSOGAG00000015515	SRSF4	61	95.681	Otolemur_garnettii
ENSRNOG00000010007	Srsf4	92	85.339	ENSPPAG00000028357	SRSF4	66	93.846	Pan_paniscus
ENSRNOG00000010007	Srsf4	92	84.361	ENSPPRG00000016248	SRSF4	61	95.681	Panthera_pardus
ENSRNOG00000010007	Srsf4	92	85.339	ENSPTRG00000000445	SRSF4	66	93.846	Pan_troglodytes
ENSRNOG00000010007	Srsf4	92	85.777	ENSPANG00000021937	SRSF4	66	94.462	Papio_anubis
ENSRNOG00000010007	Srsf4	88	91.686	ENSPEMG00000003365	Srsf4	92	90.238	Peromyscus_maniculatus_bairdii
ENSRNOG00000010007	Srsf4	54	54.895	ENSPLAG00000008812	srsf4	64	75.956	Poecilia_latipinna
ENSRNOG00000010007	Srsf4	92	85.339	ENSPPYG00000001629	SRSF4	66	94.154	Pongo_abelii
ENSRNOG00000010007	Srsf4	92	79.075	ENSPCAG00000009879	SRSF4	61	94.352	Procavia_capensis
ENSRNOG00000010007	Srsf4	92	85.495	ENSPCOG00000027341	SRSF4	92	87.061	Propithecus_coquereli
ENSRNOG00000010007	Srsf4	92	85.558	ENSRBIG00000035789	SRSF4	66	94.462	Rhinopithecus_bieti
ENSRNOG00000010007	Srsf4	92	85.558	ENSRROG00000029463	SRSF4	66	94.462	Rhinopithecus_roxellana
ENSRNOG00000010007	Srsf4	92	84.017	ENSSBOG00000027098	SRSF4	65	94.769	Saimiri_boliviensis_boliviensis
ENSRNOG00000010007	Srsf4	57	90.357	ENSSHAG00000012407	SRSF4	93	91.481	Sarcophilus_harrisii
ENSRNOG00000010007	Srsf4	65	83.801	ENSSPUG00000015318	-	63	86.601	Sphenodon_punctatus
ENSRNOG00000010007	Srsf4	54	70.342	ENSSPAG00000014538	srsf4	83	85.950	Stegastes_partitus
ENSRNOG00000010007	Srsf4	67	86.196	ENSSSCG00000003589	SRSF4	61	93.023	Sus_scrofa
ENSRNOG00000010007	Srsf4	80	71.173	ENSTGUG00000000765	SRSF4	59	80.989	Taeniopygia_guttata
ENSRNOG00000010007	Srsf4	55	66.783	ENSTRUG00000011891	srsf4	62	80.829	Takifugu_rubripes
ENSRNOG00000010007	Srsf4	92	83.297	ENSTTRG00000002572	SRSF4	61	94.684	Tursiops_truncatus
ENSRNOG00000010007	Srsf4	92	83.297	ENSUAMG00000006106	SRSF4	60	96.013	Ursus_americanus
ENSRNOG00000010007	Srsf4	85	82.118	ENSVVUG00000012690	SRSF4	56	94.052	Vulpes_vulpes
ENSRNOG00000010007	Srsf4	72	56.704	ENSXCOG00000018826	srsf4	89	81.513	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0002244	hematopoietic progenitor cell differentiation	-	ISO	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	23233666.	IDA	Component
GO:0016607	nuclear speck	21873635.	IBA	Component
GO:0016607	nuclear speck	-	ISO	Component
GO:0032868	response to insulin	11283022.	IEP	Process
GO:0045292	mRNA cis splicing, via spliceosome	21873635.	IBA	Process
GO:0048025	negative regulation of mRNA splicing, via spliceosome	-	IEA	Process
GO:0048025	negative regulation of mRNA splicing, via spliceosome	-	ISO	Process
GO:1990825	sequence-specific mRNA binding	23233666.	IDA	Function