EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000010008 (Gene tree)
Gene ID: 361102
Gene Symbol: Polr3a
Alias: LOC361102|RGD1305574
Full Name: RNA polymerase III subunit A
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 39308 bases
Position: chr16:716683-755990
Accession: 1305574
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000013501	RNA_pol_Rpb1_5	PF04998.17	1.4e-88	1	1
ENSRNOP00000013501	RNA_pol_Rpb1_4	PF05000.17	4.7e-32	1	1
ENSRNOP00000013501	RNA_pol_Rpb1_2	PF00623.20	9.2e-75	1	1
ENSRNOP00000013501	RNA_pol_Rpb1_3	PF04983.18	5.3e-42	1	1
ENSRNOP00000013501	RNA_pol_Rpb1_1	PF04997.12	8.2e-97	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000013501	-	5841	XM_341388	ENSRNOP00000013501	1390 (aa)	XP_001056048	E9PTB6

Gene Model

Click here to download ENSRNOG00000010008's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03020	RNA polymerase	KEGG
rno04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000010008's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000010008	Polr3a	69	32.911	ENSRNOG00000009545	Polr1a	62	32.911
ENSRNOG00000010008	Polr3a	91	37.829	ENSRNOG00000028834	Polr2a	66	37.969

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000010008	Polr3a	100	97.986	ENSG00000148606	POLR3A	100	97.986	Homo_sapiens
ENSRNOG00000010008	Polr3a	62	86.179	ENSAPOG00000022727	polr3a	99	86.179	Acanthochromis_polyacanthus
ENSRNOG00000010008	Polr3a	100	97.918	ENSAMEG00000017801	POLR3A	100	97.918	Ailuropoda_melanoleuca
ENSRNOG00000010008	Polr3a	93	90.362	ENSACIG00000024504	polr3a	97	90.362	Amphilophus_citrinellus
ENSRNOG00000010008	Polr3a	100	87.050	ENSAOCG00000003949	-	100	87.050	Amphiprion_ocellaris
ENSRNOG00000010008	Polr3a	100	90.288	ENSAOCG00000002071	polr3a	100	90.288	Amphiprion_ocellaris
ENSRNOG00000010008	Polr3a	100	90.288	ENSAPEG00000013351	polr3a	100	90.288	Amphiprion_percula
ENSRNOG00000010008	Polr3a	100	90.144	ENSAPEG00000001966	-	100	90.144	Amphiprion_percula
ENSRNOG00000010008	Polr3a	100	89.712	ENSATEG00000023277	polr3a	100	89.712	Anabas_testudineus
ENSRNOG00000010008	Polr3a	99	95.709	ENSAPLG00000015878	POLR3A	99	95.709	Anas_platyrhynchos
ENSRNOG00000010008	Polr3a	93	93.125	ENSACAG00000007985	POLR3A	99	93.125	Anolis_carolinensis
ENSRNOG00000010008	Polr3a	100	95.190	ENSANAG00000028922	POLR3A	96	99.363	Aotus_nancymaae
ENSRNOG00000010008	Polr3a	100	89.281	ENSACLG00000005914	polr3a	100	89.281	Astatotilapia_calliptera
ENSRNOG00000010008	Polr3a	100	87.482	ENSAMXG00000018852	polr3a	100	87.482	Astyanax_mexicanus
ENSRNOG00000010008	Polr3a	100	97.842	ENSBTAG00000013259	POLR3A	100	97.842	Bos_taurus
ENSRNOG00000010008	Polr3a	99	56.615	WBGene00004411	rpc-1	99	56.615	Caenorhabditis_elegans
ENSRNOG00000010008	Polr3a	100	97.986	ENSCJAG00000001015	POLR3A	100	97.986	Callithrix_jacchus
ENSRNOG00000010008	Polr3a	100	98.201	ENSCAFG00000015546	POLR3A	100	98.201	Canis_familiaris
ENSRNOG00000010008	Polr3a	100	98.201	ENSCAFG00020014711	POLR3A	100	98.201	Canis_lupus_dingo
ENSRNOG00000010008	Polr3a	100	97.410	ENSCHIG00000000352	POLR3A	100	97.410	Capra_hircus
ENSRNOG00000010008	Polr3a	100	97.482	ENSTSYG00000006671	POLR3A	100	97.482	Carlito_syrichta
ENSRNOG00000010008	Polr3a	99	97.164	ENSCAPG00000016031	POLR3A	100	97.164	Cavia_aperea
ENSRNOG00000010008	Polr3a	100	97.194	ENSCPOG00000022387	POLR3A	100	97.194	Cavia_porcellus
ENSRNOG00000010008	Polr3a	100	95.827	ENSCCAG00000032995	POLR3A	100	95.827	Cebus_capucinus
ENSRNOG00000010008	Polr3a	100	97.770	ENSCATG00000035842	POLR3A	100	97.770	Cercocebus_atys
ENSRNOG00000010008	Polr3a	100	96.978	ENSCLAG00000009629	POLR3A	100	96.978	Chinchilla_lanigera
ENSRNOG00000010008	Polr3a	100	97.914	ENSCSAG00000009292	POLR3A	100	97.914	Chlorocebus_sabaeus
ENSRNOG00000010008	Polr3a	81	87.771	ENSCHOG00000008368	POLR3A	95	87.771	Choloepus_hoffmanni
ENSRNOG00000010008	Polr3a	99	94.744	ENSCPBG00000002079	POLR3A	99	94.744	Chrysemys_picta_bellii
ENSRNOG00000010008	Polr3a	99	69.669	ENSCSAVG00000009925	-	99	69.669	Ciona_savignyi
ENSRNOG00000010008	Polr3a	86	96.535	ENSCANG00000041071	POLR3A	100	96.535	Colobus_angolensis_palliatus
ENSRNOG00000010008	Polr3a	78	99.359	ENSCGRG00001015599	-	92	99.359	Cricetulus_griseus_chok1gshd
ENSRNOG00000010008	Polr3a	88	98.925	ENSCGRG00000001019	Polr3a	100	98.925	Cricetulus_griseus_crigri
ENSRNOG00000010008	Polr3a	100	89.856	ENSCSEG00000016653	polr3a	100	89.856	Cynoglossus_semilaevis
ENSRNOG00000010008	Polr3a	100	89.496	ENSCVAG00000023049	polr3a	100	89.496	Cyprinodon_variegatus
ENSRNOG00000010008	Polr3a	99	90.209	ENSDARG00000102569	polr3a	99	90.209	Danio_rerio
ENSRNOG00000010008	Polr3a	100	97.194	ENSDNOG00000010194	POLR3A	100	97.194	Dasypus_novemcinctus
ENSRNOG00000010008	Polr3a	100	98.129	ENSDORG00000000184	Polr3a	100	98.129	Dipodomys_ordii
ENSRNOG00000010008	Polr3a	99	57.453	FBgn0030687	CG17209	99	57.453	Drosophila_melanogaster
ENSRNOG00000010008	Polr3a	88	97.166	ENSETEG00000007477	POLR3A	89	97.166	Echinops_telfairi
ENSRNOG00000010008	Polr3a	59	76.581	ENSEBUG00000013761	polr3a	98	76.581	Eptatretus_burgeri
ENSRNOG00000010008	Polr3a	100	98.273	ENSEASG00005023053	POLR3A	100	98.273	Equus_asinus_asinus
ENSRNOG00000010008	Polr3a	97	98.137	ENSECAG00000019416	POLR3A	100	97.975	Equus_caballus
ENSRNOG00000010008	Polr3a	96	92.916	ENSEEUG00000001774	POLR3A	100	92.916	Erinaceus_europaeus
ENSRNOG00000010008	Polr3a	100	88.011	ENSELUG00000014016	polr3a	100	88.011	Esox_lucius
ENSRNOG00000010008	Polr3a	100	98.417	ENSFCAG00000000843	POLR3A	100	98.417	Felis_catus
ENSRNOG00000010008	Polr3a	100	95.471	ENSFALG00000006913	POLR3A	100	95.471	Ficedula_albicollis
ENSRNOG00000010008	Polr3a	100	97.194	ENSFDAG00000007813	POLR3A	100	97.194	Fukomys_damarensis
ENSRNOG00000010008	Polr3a	95	89.605	ENSFHEG00000011922	polr3a	99	89.605	Fundulus_heteroclitus
ENSRNOG00000010008	Polr3a	100	84.795	ENSGMOG00000000291	polr3a	99	84.795	Gadus_morhua
ENSRNOG00000010008	Polr3a	100	95.827	ENSGALG00000004947	POLR3A	100	95.827	Gallus_gallus
ENSRNOG00000010008	Polr3a	100	89.568	ENSGAFG00000005112	polr3a	100	89.568	Gambusia_affinis
ENSRNOG00000010008	Polr3a	100	89.137	ENSGACG00000002304	polr3a	100	89.137	Gasterosteus_aculeatus
ENSRNOG00000010008	Polr3a	95	94.928	ENSGAGG00000010386	POLR3A	98	94.928	Gopherus_agassizii
ENSRNOG00000010008	Polr3a	99	96.893	ENSGGOG00000027729	POLR3A	100	98.043	Gorilla_gorilla
ENSRNOG00000010008	Polr3a	100	89.281	ENSHBUG00000018098	polr3a	100	89.281	Haplochromis_burtoni
ENSRNOG00000010008	Polr3a	100	97.194	ENSHGLG00000017899	POLR3A	100	97.194	Heterocephalus_glaber_female
ENSRNOG00000010008	Polr3a	100	97.194	ENSHGLG00100008483	POLR3A	100	97.194	Heterocephalus_glaber_male
ENSRNOG00000010008	Polr3a	100	88.921	ENSHCOG00000001075	polr3a	100	88.921	Hippocampus_comes
ENSRNOG00000010008	Polr3a	100	98.201	ENSSTOG00000012983	POLR3A	100	98.201	Ictidomys_tridecemlineatus
ENSRNOG00000010008	Polr3a	100	89.712	ENSKMAG00000015290	polr3a	100	89.712	Kryptolebias_marmoratus
ENSRNOG00000010008	Polr3a	99	88.697	ENSLBEG00000017214	polr3a	99	88.697	Labrus_bergylta
ENSRNOG00000010008	Polr3a	97	89.814	ENSLACG00000018557	POLR3A	99	89.814	Latimeria_chalumnae
ENSRNOG00000010008	Polr3a	100	91.673	ENSLOCG00000004942	polr3a	100	91.673	Lepisosteus_oculatus
ENSRNOG00000010008	Polr3a	100	96.118	ENSLAFG00000016719	POLR3A	100	96.118	Loxodonta_africana
ENSRNOG00000010008	Polr3a	100	97.842	ENSMFAG00000032218	POLR3A	100	97.842	Macaca_fascicularis
ENSRNOG00000010008	Polr3a	100	97.842	ENSMMUG00000005514	POLR3A	100	97.842	Macaca_mulatta
ENSRNOG00000010008	Polr3a	99	90.565	ENSMNEG00000035163	POLR3A	99	97.687	Macaca_nemestrina
ENSRNOG00000010008	Polr3a	100	93.247	ENSMLEG00000030014	POLR3A	98	98.734	Mandrillus_leucophaeus
ENSRNOG00000010008	Polr3a	100	89.568	ENSMAMG00000017497	polr3a	100	89.568	Mastacembelus_armatus
ENSRNOG00000010008	Polr3a	100	89.281	ENSMZEG00005000576	polr3a	100	89.281	Maylandia_zebra
ENSRNOG00000010008	Polr3a	100	77.557	ENSMGAG00000005713	-	100	77.557	Meleagris_gallopavo
ENSRNOG00000010008	Polr3a	100	96.978	ENSMAUG00000016247	Polr3a	100	96.978	Mesocricetus_auratus
ENSRNOG00000010008	Polr3a	100	98.058	ENSMICG00000005937	POLR3A	100	98.089	Microcebus_murinus
ENSRNOG00000010008	Polr3a	100	98.993	ENSMOCG00000012185	Polr3a	100	98.993	Microtus_ochrogaster
ENSRNOG00000010008	Polr3a	100	89.065	ENSMMOG00000013822	polr3a	100	89.065	Mola_mola
ENSRNOG00000010008	Polr3a	100	96.835	ENSMODG00000001036	POLR3A	100	96.835	Monodelphis_domestica
ENSRNOG00000010008	Polr3a	100	89.065	ENSMALG00000001249	polr3a	100	89.065	Monopterus_albus
ENSRNOG00000010008	Polr3a	100	99.496	MGP_CAROLIEiJ_G0019016	Polr3a	100	99.496	Mus_caroli
ENSRNOG00000010008	Polr3a	100	99.353	ENSMUSG00000025280	Polr3a	100	99.353	Mus_musculus
ENSRNOG00000010008	Polr3a	100	99.353	MGP_PahariEiJ_G0030029	Polr3a	100	99.353	Mus_pahari
ENSRNOG00000010008	Polr3a	100	96.906	MGP_SPRETEiJ_G0019894	Polr3a	100	96.906	Mus_spretus
ENSRNOG00000010008	Polr3a	100	97.504	ENSMPUG00000003790	POLR3A	100	97.504	Mustela_putorius_furo
ENSRNOG00000010008	Polr3a	100	97.050	ENSMLUG00000011522	POLR3A	100	97.050	Myotis_lucifugus
ENSRNOG00000010008	Polr3a	100	96.691	ENSNGAG00000015863	Polr3a	100	96.691	Nannospalax_galili
ENSRNOG00000010008	Polr3a	100	87.986	ENSNBRG00000014262	polr3a	100	87.986	Neolamprologus_brichardi
ENSRNOG00000010008	Polr3a	88	92.208	ENSNLEG00000010501	POLR3A	92	92.208	Nomascus_leucogenys
ENSRNOG00000010008	Polr3a	99	83.927	ENSMEUG00000012446	POLR3A	100	83.927	Notamacropus_eugenii
ENSRNOG00000010008	Polr3a	100	92.518	ENSOPRG00000001880	-	100	92.518	Ochotona_princeps
ENSRNOG00000010008	Polr3a	100	95.827	ENSODEG00000015146	POLR3A	100	95.827	Octodon_degus
ENSRNOG00000010008	Polr3a	100	89.712	ENSONIG00000016129	polr3a	100	89.712	Oreochromis_niloticus
ENSRNOG00000010008	Polr3a	98	96.129	ENSOANG00000007013	POLR3A	100	96.129	Ornithorhynchus_anatinus
ENSRNOG00000010008	Polr3a	100	97.482	ENSOCUG00000012450	POLR3A	100	97.482	Oryctolagus_cuniculus
ENSRNOG00000010008	Polr3a	100	89.856	ENSORLG00000008958	polr3a	100	89.856	Oryzias_latipes
ENSRNOG00000010008	Polr3a	100	87.626	ENSORLG00020007525	polr3a	98	90.164	Oryzias_latipes_hni
ENSRNOG00000010008	Polr3a	100	89.712	ENSORLG00015006633	polr3a	100	89.712	Oryzias_latipes_hsok
ENSRNOG00000010008	Polr3a	100	88.849	ENSOMEG00000012865	polr3a	100	88.849	Oryzias_melastigma
ENSRNOG00000010008	Polr3a	100	97.986	ENSOGAG00000010995	POLR3A	100	97.986	Otolemur_garnettii
ENSRNOG00000010008	Polr3a	100	97.414	ENSOARG00000009656	POLR3A	100	97.414	Ovis_aries
ENSRNOG00000010008	Polr3a	100	98.417	ENSPPRG00000002128	POLR3A	100	98.417	Panthera_pardus
ENSRNOG00000010008	Polr3a	100	98.417	ENSPTIG00000020916	POLR3A	100	98.417	Panthera_tigris_altaica
ENSRNOG00000010008	Polr3a	100	97.914	ENSPTRG00000002664	POLR3A	100	97.914	Pan_troglodytes
ENSRNOG00000010008	Polr3a	100	97.770	ENSPANG00000022508	POLR3A	100	97.770	Papio_anubis
ENSRNOG00000010008	Polr3a	100	91.223	ENSPKIG00000008140	polr3a	100	91.223	Paramormyrops_kingsleyae
ENSRNOG00000010008	Polr3a	98	95.033	ENSPSIG00000002092	POLR3A	100	95.033	Pelodiscus_sinensis
ENSRNOG00000010008	Polr3a	100	98.993	ENSPEMG00000006768	Polr3a	100	98.993	Peromyscus_maniculatus_bairdii
ENSRNOG00000010008	Polr3a	100	96.619	ENSPCIG00000015842	POLR3A	100	96.619	Phascolarctos_cinereus
ENSRNOG00000010008	Polr3a	54	90.738	ENSPFOG00000006458	polr3a	100	90.738	Poecilia_formosa
ENSRNOG00000010008	Polr3a	100	89.856	ENSPLAG00000000997	polr3a	100	89.856	Poecilia_latipinna
ENSRNOG00000010008	Polr3a	100	89.784	ENSPMEG00000006821	polr3a	100	89.784	Poecilia_mexicana
ENSRNOG00000010008	Polr3a	100	89.712	ENSPREG00000002385	polr3a	100	89.712	Poecilia_reticulata
ENSRNOG00000010008	Polr3a	93	97.602	ENSPPYG00000002305	POLR3A	99	97.602	Pongo_abelii
ENSRNOG00000010008	Polr3a	84	85.115	ENSPCAG00000005690	POLR3A	87	85.115	Procavia_capensis
ENSRNOG00000010008	Polr3a	100	97.770	ENSPCOG00000028311	POLR3A	100	97.770	Propithecus_coquereli
ENSRNOG00000010008	Polr3a	100	96.835	ENSPVAG00000015553	POLR3A	100	96.835	Pteropus_vampyrus
ENSRNOG00000010008	Polr3a	100	89.281	ENSPNYG00000020987	polr3a	100	89.281	Pundamilia_nyererei
ENSRNOG00000010008	Polr3a	99	86.321	ENSPNAG00000006629	polr3a	99	86.321	Pygocentrus_nattereri
ENSRNOG00000010008	Polr3a	100	93.525	ENSRBIG00000034967	POLR3A	98	98.734	Rhinopithecus_bieti
ENSRNOG00000010008	Polr3a	100	97.698	ENSRROG00000025527	POLR3A	100	97.698	Rhinopithecus_roxellana
ENSRNOG00000010008	Polr3a	99	50.345	YOR116C	RPO31	99	50.345	Saccharomyces_cerevisiae
ENSRNOG00000010008	Polr3a	100	98.058	ENSSBOG00000022199	POLR3A	100	98.058	Saimiri_boliviensis_boliviensis
ENSRNOG00000010008	Polr3a	100	96.475	ENSSHAG00000007588	POLR3A	94	96.475	Sarcophilus_harrisii
ENSRNOG00000010008	Polr3a	100	91.583	ENSSFOG00015014357	polr3a	100	91.583	Scleropages_formosus
ENSRNOG00000010008	Polr3a	100	89.209	ENSSMAG00000001780	polr3a	100	89.209	Scophthalmus_maximus
ENSRNOG00000010008	Polr3a	100	90.000	ENSSDUG00000019840	polr3a	100	90.000	Seriola_dumerili
ENSRNOG00000010008	Polr3a	100	90.000	ENSSLDG00000023908	polr3a	100	90.000	Seriola_lalandi_dorsalis
ENSRNOG00000010008	Polr3a	69	98.119	ENSSARG00000009916	POLR3A	89	98.119	Sorex_araneus
ENSRNOG00000010008	Polr3a	100	93.022	ENSSPUG00000013209	POLR3A	100	93.022	Sphenodon_punctatus
ENSRNOG00000010008	Polr3a	100	90.144	ENSSPAG00000017712	polr3a	100	90.144	Stegastes_partitus
ENSRNOG00000010008	Polr3a	100	97.842	ENSSSCG00000010327	POLR3A	100	97.872	Sus_scrofa
ENSRNOG00000010008	Polr3a	100	95.396	ENSTGUG00000006423	-	100	95.396	Taeniopygia_guttata
ENSRNOG00000010008	Polr3a	100	89.065	ENSTRUG00000013488	polr3a	100	89.065	Takifugu_rubripes
ENSRNOG00000010008	Polr3a	100	89.296	ENSTNIG00000013151	polr3a	100	89.296	Tetraodon_nigroviridis
ENSRNOG00000010008	Polr3a	71	95.745	ENSTBEG00000015288	POLR3A	75	95.745	Tupaia_belangeri
ENSRNOG00000010008	Polr3a	96	98.410	ENSTTRG00000007817	POLR3A	100	98.410	Tursiops_truncatus
ENSRNOG00000010008	Polr3a	100	95.827	ENSUAMG00000011283	POLR3A	100	95.827	Ursus_americanus
ENSRNOG00000010008	Polr3a	100	98.201	ENSUMAG00000013913	POLR3A	100	98.201	Ursus_maritimus
ENSRNOG00000010008	Polr3a	99	89.600	ENSVPAG00000003285	POLR3A	100	89.600	Vicugna_pacos
ENSRNOG00000010008	Polr3a	100	98.129	ENSVVUG00000025523	POLR3A	100	98.129	Vulpes_vulpes
ENSRNOG00000010008	Polr3a	86	92.231	ENSXETG00000018101	polr3a	100	92.231	Xenopus_tropicalis
ENSRNOG00000010008	Polr3a	100	89.568	ENSXMAG00000015213	polr3a	100	89.568	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001056	RNA polymerase III activity	21873635.	IBA	Function
GO:0003674	molecular_function	-	ND	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003682	chromatin binding	-	IEA	Function
GO:0003682	chromatin binding	-	ISO	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	21873635.	IBA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005666	RNA polymerase III complex	21873635.	IBA	Component
GO:0005666	RNA polymerase III complex	-	ISO	Component
GO:0006383	transcription by RNA polymerase III	-	IEA	Process
GO:0008150	biological_process	-	ND	Process
GO:0032728	positive regulation of interferon-beta production	-	IEA	Process
GO:0032728	positive regulation of interferon-beta production	-	ISO	Process
GO:0045087	innate immune response	-	IEA	Process
GO:0045087	innate immune response	-	ISO	Process