EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000010224 (Gene tree)
Gene ID: 308821
Gene Symbol: Rab30
Alias: LOC308821|MGC108822|Rsb30
Full Name: RAB30%2C member RAS oncogene family
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 86685 bases
Position: chr1:157573324-157660008
Accession: 1309507
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000068836	MMR_HSR1	PF01926.23	1.3e-05	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000092066	-	1040	XM_006229692	ENSRNOP00000068836	203 (aa)	XP_006229754	A0A0G2JTT4
ENSRNOT00000013851	-	1295	-	ENSRNOP00000013851	175 (aa)	-	Q5BK72

Gene Model

Click here to download ENSRNOG00000010224's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000010224's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000010224	Rab30	82	30.539	ENSRNOG00000050578	Rheb	88	30.539
ENSRNOG00000010224	Rab30	88	38.043	ENSRNOG00000012247	Rab7a	93	39.205
ENSRNOG00000010224	Rab30	95	38.889	ENSRNOG00000030443	Rab9a	97	38.889
ENSRNOG00000010224	Rab30	97	37.981	ENSRNOG00000011302	Rab11a	96	37.981
ENSRNOG00000010224	Rab30	78	38.272	ENSRNOG00000001311	Rab36	61	38.272
ENSRNOG00000010224	Rab30	80	50.000	ENSRNOG00000016733	Rab13	80	50.000
ENSRNOG00000010224	Rab30	97	40.670	ENSRNOG00000023640	Rab25	96	40.670
ENSRNOG00000010224	Rab30	97	39.524	ENSRNOG00000007648	Rab11b	96	39.524
ENSRNOG00000010224	Rab30	83	47.929	ENSRNOG00000018972	Rab18	82	47.929
ENSRNOG00000010224	Rab30	80	42.945	ENSRNOG00000005762	Rab22a	84	42.945
ENSRNOG00000010224	Rab30	81	33.133	ENSRNOG00000014060	Mras	79	33.133
ENSRNOG00000010224	Rab30	87	37.500	ENSRNOG00000012629	Rab23	74	37.500
ENSRNOG00000010224	Rab30	89	34.426	ENSRNOG00000016611	Hras	94	34.426
ENSRNOG00000010224	Rab30	88	47.283	ENSRNOG00000019295	Rab12	76	47.059
ENSRNOG00000010224	Rab30	79	41.615	ENSRNOG00000009198	Rab6b	77	41.615
ENSRNOG00000010224	Rab30	79	42.857	ENSRNOG00000018176	Rab6a	77	42.857
ENSRNOG00000010224	Rab30	84	34.503	ENSRNOG00000023079	Nras	89	34.503
ENSRNOG00000010224	Rab30	91	39.459	ENSRNOG00000018568	Rab5c	83	39.459
ENSRNOG00000010224	Rab30	81	51.176	ENSRNOG00000006698	Rab33a	72	51.176
ENSRNOG00000010224	Rab30	81	47.059	ENSRNOG00000013035	Rab33b	74	47.059
ENSRNOG00000010224	Rab30	87	33.146	ENSRNOG00000009338	Kras	93	33.146
ENSRNOG00000010224	Rab30	79	34.756	ENSRNOG00000013947	Rabl2	62	34.756
ENSRNOG00000010224	Rab30	96	43.147	ENSRNOG00000012488	Rab2b	92	43.147
ENSRNOG00000010224	Rab30	83	42.857	ENSRNOG00000006130	Rab5b	78	42.857
ENSRNOG00000010224	Rab30	86	50.286	ENSRNOG00000022014	Rab35	86	50.286
ENSRNOG00000010224	Rab30	88	42.222	ENSRNOG00000005963	Rab2a	87	42.222
ENSRNOG00000010224	Rab30	76	42.857	ENSRNOG00000042189	Rab31	79	42.857
ENSRNOG00000010224	Rab30	79	39.759	ENSRNOG00000047960	Rab9b	82	39.759
ENSRNOG00000010224	Rab30	77	35.625	ENSRNOG00000023375	Rab34	63	35.625
ENSRNOG00000010224	Rab30	82	50.000	ENSRNOG00000050510	LOC102555167	83	50.000
ENSRNOG00000010224	Rab30	89	40.556	ENSRNOG00000018901	Rab14	84	40.556
ENSRNOG00000010224	Rab30	86	42.529	ENSRNOG00000007364	Rab15	82	42.529
ENSRNOG00000010224	Rab30	82	50.602	ENSRNOG00000004992	Rab1a	81	50.602

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000010224	Rab30	100	100.000	ENSG00000137502	RAB30	100	100.000	Homo_sapiens
ENSRNOG00000010224	Rab30	100	86.207	ENSAPOG00000022625	rab30	100	86.207	Acanthochromis_polyacanthus
ENSRNOG00000010224	Rab30	100	100.000	ENSAMEG00000005231	RAB30	100	100.000	Ailuropoda_melanoleuca
ENSRNOG00000010224	Rab30	95	86.010	ENSAOCG00000012556	rab30	69	86.010	Amphiprion_ocellaris
ENSRNOG00000010224	Rab30	100	86.207	ENSAPEG00000012044	rab30	100	86.207	Amphiprion_percula
ENSRNOG00000010224	Rab30	100	86.207	ENSATEG00000010475	rab30	100	86.207	Anabas_testudineus
ENSRNOG00000010224	Rab30	100	98.030	ENSACAG00000001098	RAB30	100	98.030	Anolis_carolinensis
ENSRNOG00000010224	Rab30	100	100.000	ENSANAG00000029292	RAB30	100	100.000	Aotus_nancymaae
ENSRNOG00000010224	Rab30	100	86.700	ENSACLG00000023526	rab30	100	86.700	Astatotilapia_calliptera
ENSRNOG00000010224	Rab30	100	85.222	ENSAMXG00000009935	rab30	82	85.222	Astyanax_mexicanus
ENSRNOG00000010224	Rab30	100	100.000	ENSBTAG00000002417	RAB30	100	100.000	Bos_taurus
ENSRNOG00000010224	Rab30	85	63.218	WBGene00004282	rab-30	81	63.218	Caenorhabditis_elegans
ENSRNOG00000010224	Rab30	100	100.000	ENSCJAG00000041773	RAB30	100	100.000	Callithrix_jacchus
ENSRNOG00000010224	Rab30	100	100.000	ENSCAFG00000004616	RAB30	100	100.000	Canis_familiaris
ENSRNOG00000010224	Rab30	100	100.000	ENSCAFG00020017865	RAB30	100	100.000	Canis_lupus_dingo
ENSRNOG00000010224	Rab30	100	100.000	ENSCHIG00000020601	RAB30	100	100.000	Capra_hircus
ENSRNOG00000010224	Rab30	100	100.000	ENSTSYG00000009392	RAB30	100	100.000	Carlito_syrichta
ENSRNOG00000010224	Rab30	100	100.000	ENSCAPG00000009331	RAB30	100	100.000	Cavia_aperea
ENSRNOG00000010224	Rab30	100	100.000	ENSCPOG00000005047	RAB30	100	100.000	Cavia_porcellus
ENSRNOG00000010224	Rab30	100	100.000	ENSCCAG00000026824	RAB30	100	100.000	Cebus_capucinus
ENSRNOG00000010224	Rab30	100	100.000	ENSCATG00000040441	RAB30	100	100.000	Cercocebus_atys
ENSRNOG00000010224	Rab30	100	100.000	ENSCLAG00000014030	RAB30	100	100.000	Chinchilla_lanigera
ENSRNOG00000010224	Rab30	100	100.000	ENSCSAG00000003704	RAB30	100	100.000	Chlorocebus_sabaeus
ENSRNOG00000010224	Rab30	100	97.537	ENSCPBG00000006855	RAB30	100	97.537	Chrysemys_picta_bellii
ENSRNOG00000010224	Rab30	100	99.507	ENSCANG00000022240	RAB30	100	99.507	Colobus_angolensis_palliatus
ENSRNOG00000010224	Rab30	100	100.000	ENSCGRG00001021787	Rab30	100	100.000	Cricetulus_griseus_chok1gshd
ENSRNOG00000010224	Rab30	100	100.000	ENSCGRG00000014842	Rab30	100	100.000	Cricetulus_griseus_crigri
ENSRNOG00000010224	Rab30	100	85.714	ENSCSEG00000007292	rab30	100	85.714	Cynoglossus_semilaevis
ENSRNOG00000010224	Rab30	100	85.222	ENSCVAG00000018085	rab30	100	85.222	Cyprinodon_variegatus
ENSRNOG00000010224	Rab30	99	85.572	ENSDARG00000037884	rab30	100	85.572	Danio_rerio
ENSRNOG00000010224	Rab30	100	100.000	ENSDNOG00000039115	RAB30	100	100.000	Dasypus_novemcinctus
ENSRNOG00000010224	Rab30	100	99.015	ENSDORG00000010504	-	100	99.015	Dipodomys_ordii
ENSRNOG00000010224	Rab30	100	97.044	ENSDORG00000015066	-	100	97.044	Dipodomys_ordii
ENSRNOG00000010224	Rab30	85	73.988	FBgn0031882	Rab30	87	67.692	Drosophila_melanogaster
ENSRNOG00000010224	Rab30	100	100.000	ENSEASG00005012754	RAB30	100	100.000	Equus_asinus_asinus
ENSRNOG00000010224	Rab30	100	100.000	ENSECAG00000022769	RAB30	100	100.000	Equus_caballus
ENSRNOG00000010224	Rab30	100	84.314	ENSELUG00000022997	rab30	100	85.149	Esox_lucius
ENSRNOG00000010224	Rab30	100	100.000	ENSFCAG00000014416	RAB30	100	100.000	Felis_catus
ENSRNOG00000010224	Rab30	100	98.522	ENSFALG00000007765	RAB30	100	98.522	Ficedula_albicollis
ENSRNOG00000010224	Rab30	100	100.000	ENSFDAG00000014521	RAB30	100	100.000	Fukomys_damarensis
ENSRNOG00000010224	Rab30	100	85.714	ENSFHEG00000013918	rab30	100	85.714	Fundulus_heteroclitus
ENSRNOG00000010224	Rab30	100	81.773	ENSGMOG00000002552	rab30	100	81.773	Gadus_morhua
ENSRNOG00000010224	Rab30	100	98.522	ENSGALG00000017248	RAB30	100	98.522	Gallus_gallus
ENSRNOG00000010224	Rab30	100	85.222	ENSGAFG00000020309	rab30	100	85.222	Gambusia_affinis
ENSRNOG00000010224	Rab30	100	87.192	ENSGACG00000012006	rab30	100	87.192	Gasterosteus_aculeatus
ENSRNOG00000010224	Rab30	100	97.537	ENSGAGG00000004474	RAB30	100	97.537	Gopherus_agassizii
ENSRNOG00000010224	Rab30	100	100.000	ENSGGOG00000017157	RAB30	100	100.000	Gorilla_gorilla
ENSRNOG00000010224	Rab30	100	86.700	ENSHBUG00000000993	rab30	93	86.700	Haplochromis_burtoni
ENSRNOG00000010224	Rab30	100	100.000	ENSHGLG00000002759	RAB30	100	100.000	Heterocephalus_glaber_female
ENSRNOG00000010224	Rab30	100	100.000	ENSHGLG00100001213	RAB30	100	100.000	Heterocephalus_glaber_male
ENSRNOG00000010224	Rab30	66	89.474	ENSHCOG00000010707	rab30	71	89.474	Hippocampus_comes
ENSRNOG00000010224	Rab30	99	87.562	ENSIPUG00000021010	Rab30	100	87.562	Ictalurus_punctatus
ENSRNOG00000010224	Rab30	100	100.000	ENSSTOG00000020966	RAB30	100	100.000	Ictidomys_tridecemlineatus
ENSRNOG00000010224	Rab30	100	100.000	ENSJJAG00000020064	Rab30	100	100.000	Jaculus_jaculus
ENSRNOG00000010224	Rab30	100	85.714	ENSKMAG00000004439	rab30	100	85.714	Kryptolebias_marmoratus
ENSRNOG00000010224	Rab30	100	86.207	ENSLBEG00000001146	rab30	100	86.207	Labrus_bergylta
ENSRNOG00000010224	Rab30	100	91.626	ENSLACG00000006407	RAB30	100	91.626	Latimeria_chalumnae
ENSRNOG00000010224	Rab30	100	89.163	ENSLOCG00000005884	rab30	100	89.163	Lepisosteus_oculatus
ENSRNOG00000010224	Rab30	100	99.507	ENSLAFG00000010711	RAB30	100	99.507	Loxodonta_africana
ENSRNOG00000010224	Rab30	100	100.000	ENSMFAG00000033119	RAB30	100	100.000	Macaca_fascicularis
ENSRNOG00000010224	Rab30	100	100.000	ENSMMUG00000007842	RAB30	100	100.000	Macaca_mulatta
ENSRNOG00000010224	Rab30	100	100.000	ENSMNEG00000037406	RAB30	100	100.000	Macaca_nemestrina
ENSRNOG00000010224	Rab30	100	100.000	ENSMLEG00000039496	RAB30	100	100.000	Mandrillus_leucophaeus
ENSRNOG00000010224	Rab30	100	86.207	ENSMAMG00000011973	rab30	100	86.207	Mastacembelus_armatus
ENSRNOG00000010224	Rab30	100	86.700	ENSMZEG00005024032	rab30	93	86.700	Maylandia_zebra
ENSRNOG00000010224	Rab30	100	97.549	ENSMGAG00000015230	RAB30	100	97.549	Meleagris_gallopavo
ENSRNOG00000010224	Rab30	100	100.000	ENSMAUG00000008179	Rab30	100	100.000	Mesocricetus_auratus
ENSRNOG00000010224	Rab30	100	100.000	ENSMICG00000012002	RAB30	100	100.000	Microcebus_murinus
ENSRNOG00000010224	Rab30	100	100.000	ENSMOCG00000009821	-	100	100.000	Microtus_ochrogaster
ENSRNOG00000010224	Rab30	100	85.714	ENSMMOG00000000304	rab30	100	85.714	Mola_mola
ENSRNOG00000010224	Rab30	100	99.507	ENSMODG00000004506	RAB30	100	99.507	Monodelphis_domestica
ENSRNOG00000010224	Rab30	100	86.700	ENSMALG00000010438	rab30	100	86.700	Monopterus_albus
ENSRNOG00000010224	Rab30	100	99.507	MGP_CAROLIEiJ_G0029992	Rab30	100	99.507	Mus_caroli
ENSRNOG00000010224	Rab30	100	100.000	ENSMUSG00000030643	Rab30	100	100.000	Mus_musculus
ENSRNOG00000010224	Rab30	100	100.000	MGP_PahariEiJ_G0013212	Rab30	100	100.000	Mus_pahari
ENSRNOG00000010224	Rab30	100	100.000	MGP_SPRETEiJ_G0031102	Rab30	100	100.000	Mus_spretus
ENSRNOG00000010224	Rab30	100	100.000	ENSMPUG00000008088	RAB30	100	100.000	Mustela_putorius_furo
ENSRNOG00000010224	Rab30	100	98.522	ENSMLUG00000006552	RAB30	100	98.522	Myotis_lucifugus
ENSRNOG00000010224	Rab30	100	100.000	ENSNGAG00000018930	Rab30	100	100.000	Nannospalax_galili
ENSRNOG00000010224	Rab30	100	86.700	ENSNBRG00000002082	rab30	93	86.700	Neolamprologus_brichardi
ENSRNOG00000010224	Rab30	100	100.000	ENSNLEG00000029364	RAB30	100	100.000	Nomascus_leucogenys
ENSRNOG00000010224	Rab30	100	97.537	ENSMEUG00000012886	RAB30	100	97.537	Notamacropus_eugenii
ENSRNOG00000010224	Rab30	59	100.000	ENSOPRG00000007511	RAB30	100	100.000	Ochotona_princeps
ENSRNOG00000010224	Rab30	100	100.000	ENSODEG00000003833	RAB30	100	100.000	Octodon_degus
ENSRNOG00000010224	Rab30	100	86.700	ENSONIG00000005708	rab30	100	86.700	Oreochromis_niloticus
ENSRNOG00000010224	Rab30	100	100.000	ENSOCUG00000007580	RAB30	100	100.000	Oryctolagus_cuniculus
ENSRNOG00000010224	Rab30	100	85.714	ENSORLG00000029812	rab30	100	85.714	Oryzias_latipes
ENSRNOG00000010224	Rab30	100	85.714	ENSORLG00020015288	rab30	100	85.714	Oryzias_latipes_hni
ENSRNOG00000010224	Rab30	100	85.714	ENSORLG00015020972	rab30	100	85.714	Oryzias_latipes_hsok
ENSRNOG00000010224	Rab30	100	85.222	ENSOMEG00000001613	rab30	100	85.222	Oryzias_melastigma
ENSRNOG00000010224	Rab30	100	100.000	ENSOGAG00000033189	RAB30	100	100.000	Otolemur_garnettii
ENSRNOG00000010224	Rab30	100	100.000	ENSOARG00000005688	RAB30	100	100.000	Ovis_aries
ENSRNOG00000010224	Rab30	100	100.000	ENSPPAG00000031604	RAB30	100	100.000	Pan_paniscus
ENSRNOG00000010224	Rab30	100	100.000	ENSPPRG00000023881	RAB30	100	100.000	Panthera_pardus
ENSRNOG00000010224	Rab30	100	100.000	ENSPTIG00000009836	RAB30	100	100.000	Panthera_tigris_altaica
ENSRNOG00000010224	Rab30	100	100.000	ENSPTRG00000004125	RAB30	100	100.000	Pan_troglodytes
ENSRNOG00000010224	Rab30	100	100.000	ENSPANG00000003974	RAB30	100	100.000	Papio_anubis
ENSRNOG00000010224	Rab30	99	88.614	ENSPKIG00000015202	rab30	99	88.614	Paramormyrops_kingsleyae
ENSRNOG00000010224	Rab30	100	96.552	ENSPSIG00000003078	RAB30	100	96.552	Pelodiscus_sinensis
ENSRNOG00000010224	Rab30	100	76.293	ENSPMGG00000016093	rab30	100	76.293	Periophthalmus_magnuspinnatus
ENSRNOG00000010224	Rab30	100	100.000	ENSPEMG00000023854	Rab30	100	100.000	Peromyscus_maniculatus_bairdii
ENSRNOG00000010224	Rab30	99	67.619	ENSPMAG00000006105	rab30	99	67.619	Petromyzon_marinus
ENSRNOG00000010224	Rab30	100	99.507	ENSPCIG00000027547	RAB30	94	99.507	Phascolarctos_cinereus
ENSRNOG00000010224	Rab30	100	85.714	ENSPFOG00000005479	rab30	100	85.714	Poecilia_formosa
ENSRNOG00000010224	Rab30	100	85.714	ENSPLAG00000015383	rab30	100	85.714	Poecilia_latipinna
ENSRNOG00000010224	Rab30	100	85.714	ENSPMEG00000009701	rab30	100	85.714	Poecilia_mexicana
ENSRNOG00000010224	Rab30	100	85.714	ENSPREG00000014634	rab30	100	85.714	Poecilia_reticulata
ENSRNOG00000010224	Rab30	100	100.000	ENSPPYG00000003733	RAB30	100	100.000	Pongo_abelii
ENSRNOG00000010224	Rab30	100	99.507	ENSPCAG00000000574	RAB30	100	99.507	Procavia_capensis
ENSRNOG00000010224	Rab30	100	100.000	ENSPCOG00000017316	RAB30	100	100.000	Propithecus_coquereli
ENSRNOG00000010224	Rab30	100	100.000	ENSPVAG00000005455	RAB30	100	100.000	Pteropus_vampyrus
ENSRNOG00000010224	Rab30	100	86.207	ENSPNYG00000009728	rab30	93	86.207	Pundamilia_nyererei
ENSRNOG00000010224	Rab30	99	87.065	ENSPNAG00000010760	rab30	100	87.065	Pygocentrus_nattereri
ENSRNOG00000010224	Rab30	100	100.000	ENSRBIG00000039227	RAB30	100	100.000	Rhinopithecus_bieti
ENSRNOG00000010224	Rab30	100	100.000	ENSRROG00000031260	RAB30	100	100.000	Rhinopithecus_roxellana
ENSRNOG00000010224	Rab30	100	100.000	ENSSBOG00000026403	RAB30	100	100.000	Saimiri_boliviensis_boliviensis
ENSRNOG00000010224	Rab30	100	98.058	ENSSHAG00000018081	RAB30	100	98.058	Sarcophilus_harrisii
ENSRNOG00000010224	Rab30	100	85.714	ENSSMAG00000002500	rab30	100	85.714	Scophthalmus_maximus
ENSRNOG00000010224	Rab30	100	86.700	ENSSDUG00000013325	rab30	100	86.700	Seriola_dumerili
ENSRNOG00000010224	Rab30	100	86.700	ENSSLDG00000022533	rab30	100	86.700	Seriola_lalandi_dorsalis
ENSRNOG00000010224	Rab30	100	97.044	ENSSPUG00000006349	RAB30	100	97.044	Sphenodon_punctatus
ENSRNOG00000010224	Rab30	100	86.700	ENSSPAG00000013422	rab30	100	86.700	Stegastes_partitus
ENSRNOG00000010224	Rab30	100	100.000	ENSSSCG00000014900	RAB30	100	100.000	Sus_scrofa
ENSRNOG00000010224	Rab30	100	98.522	ENSTGUG00000012941	RAB30	100	98.522	Taeniopygia_guttata
ENSRNOG00000010224	Rab30	99	86.070	ENSTRUG00000022559	rab30	99	86.070	Takifugu_rubripes
ENSRNOG00000010224	Rab30	100	100.000	ENSTBEG00000009832	RAB30	100	100.000	Tupaia_belangeri
ENSRNOG00000010224	Rab30	100	100.000	ENSTTRG00000006100	RAB30	100	100.000	Tursiops_truncatus
ENSRNOG00000010224	Rab30	100	100.000	ENSUAMG00000009326	RAB30	100	100.000	Ursus_americanus
ENSRNOG00000010224	Rab30	100	100.000	ENSUMAG00000023572	RAB30	100	100.000	Ursus_maritimus
ENSRNOG00000010224	Rab30	100	100.000	ENSVVUG00000017471	RAB30	100	100.000	Vulpes_vulpes
ENSRNOG00000010224	Rab30	100	93.103	ENSXETG00000013633	rab30	100	93.103	Xenopus_tropicalis
ENSRNOG00000010224	Rab30	100	85.714	ENSXMAG00000025848	rab30	100	85.714	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000139	Golgi membrane	21873635.	IBA	Component
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005789	endoplasmic reticulum membrane	21873635.	IBA	Component
GO:0005801	cis-Golgi network	-	IEA	Component
GO:0005801	cis-Golgi network	-	ISO	Component
GO:0005802	trans-Golgi network	21873635.	IBA	Component
GO:0005802	trans-Golgi network	-	ISO	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0006888	ER to Golgi vesicle-mediated transport	21873635.	IBA	Process
GO:0007030	Golgi organization	-	IEA	Process
GO:0007030	Golgi organization	-	ISO	Process
GO:0031985	Golgi cisterna	-	IEA	Component
GO:0031985	Golgi cisterna	-	ISO	Component
GO:0032482	Rab protein signal transduction	21873635.	IBA	Process
GO:0043231	intracellular membrane-bounded organelle	-	ISO	Component