EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000010409 (Gene tree)
Gene ID: 313167
Gene Symbol: Nol6
Alias: LOC313167
Full Name: nucleolar protein 6
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 9675 bases
Position: chr5:57445344-57455018
Accession: 1308033
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000014211	Nrap	PF03813.14	6.8e-40	1	1
ENSRNOP00000068503	Nrap	PF03813.14	7.3e-40	1	1
ENSRNOP00000060015	Nrap	PF03813.14	1.2e-34	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000076185	-	819	-	-	- (aa)	-	-
ENSRNOT00000066683	-	1673	-	ENSRNOP00000060015	299 (aa)	-	B0BNB6
ENSRNOT00000076220	-	821	-	-	- (aa)	-	-
ENSRNOT00000014211	-	4605	XM_006238112	ENSRNOP00000014211	1146 (aa)	XP_006225303	A0A0G2QC27
ENSRNOT00000075842	-	3832	-	ENSRNOP00000068503	1143 (aa)	-	A0A096MKG2

Gene Model

Click here to download ENSRNOG00000010409's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000010409's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000010409	Nol6	100	87.021	ENSG00000165271	NOL6	100	91.000	Homo_sapiens
ENSRNOG00000010409	Nol6	97	52.561	ENSAPOG00000002135	nol6	97	52.561	Acanthochromis_polyacanthus
ENSRNOG00000010409	Nol6	100	84.495	ENSAMEG00000007364	NOL6	99	84.843	Ailuropoda_melanoleuca
ENSRNOG00000010409	Nol6	97	54.061	ENSACIG00000018888	nol6	98	54.061	Amphilophus_citrinellus
ENSRNOG00000010409	Nol6	99	51.401	ENSAOCG00000006894	nol6	99	51.401	Amphiprion_ocellaris
ENSRNOG00000010409	Nol6	97	45.763	ENSAOCG00000002591	NOL6	99	52.386	Amphiprion_ocellaris
ENSRNOG00000010409	Nol6	95	53.431	ENSAPEG00000017733	nol6	99	53.431	Amphiprion_percula
ENSRNOG00000010409	Nol6	93	53.371	ENSATEG00000003713	nol6	97	53.371	Anabas_testudineus
ENSRNOG00000010409	Nol6	93	59.628	ENSAPLG00000003837	NOL6	100	60.279	Anas_platyrhynchos
ENSRNOG00000010409	Nol6	98	61.106	ENSACAG00000012749	-	99	60.862	Anolis_carolinensis
ENSRNOG00000010409	Nol6	98	86.335	ENSANAG00000019320	NOL6	100	86.335	Aotus_nancymaae
ENSRNOG00000010409	Nol6	97	54.088	ENSACLG00000006141	nol6	97	54.088	Astatotilapia_calliptera
ENSRNOG00000010409	Nol6	96	51.906	ENSAMXG00000007881	nol6	97	51.906	Astyanax_mexicanus
ENSRNOG00000010409	Nol6	100	84.146	ENSBTAG00000003323	NOL6	100	84.146	Bos_taurus
ENSRNOG00000010409	Nol6	100	85.366	ENSCJAG00000008222	NOL6	100	87.227	Callithrix_jacchus
ENSRNOG00000010409	Nol6	100	84.408	ENSCAFG00000001869	NOL6	100	84.756	Canis_familiaris
ENSRNOG00000010409	Nol6	100	83.679	ENSCAFG00020015767	NOL6	99	84.281	Canis_lupus_dingo
ENSRNOG00000010409	Nol6	100	84.321	ENSCHIG00000011813	NOL6	100	84.321	Capra_hircus
ENSRNOG00000010409	Nol6	100	85.017	ENSTSYG00000008125	NOL6	100	88.889	Carlito_syrichta
ENSRNOG00000010409	Nol6	98	80.444	ENSCAPG00000011587	NOL6	100	80.444	Cavia_aperea
ENSRNOG00000010409	Nol6	100	84.321	ENSCPOG00000012282	NOL6	100	84.321	Cavia_porcellus
ENSRNOG00000010409	Nol6	100	85.976	ENSCCAG00000022349	NOL6	100	85.976	Cebus_capucinus
ENSRNOG00000010409	Nol6	100	86.987	ENSCATG00000031690	NOL6	100	88.000	Cercocebus_atys
ENSRNOG00000010409	Nol6	100	81.063	ENSCLAG00000002096	NOL6	99	88.235	Chinchilla_lanigera
ENSRNOG00000010409	Nol6	100	86.585	ENSCSAG00000009990	NOL6	100	86.585	Chlorocebus_sabaeus
ENSRNOG00000010409	Nol6	99	63.264	ENSCPBG00000005864	NOL6	99	63.264	Chrysemys_picta_bellii
ENSRNOG00000010409	Nol6	77	43.043	ENSCING00000015753	-	97	43.043	Ciona_intestinalis
ENSRNOG00000010409	Nol6	95	37.375	ENSCSAVG00000003332	-	100	37.192	Ciona_savignyi
ENSRNOG00000010409	Nol6	100	86.760	ENSCANG00000017993	NOL6	100	88.000	Colobus_angolensis_palliatus
ENSRNOG00000010409	Nol6	100	90.489	ENSCGRG00001020245	Nol6	100	90.489	Cricetulus_griseus_chok1gshd
ENSRNOG00000010409	Nol6	100	86.288	ENSCGRG00000014588	Nol6	99	93.729	Cricetulus_griseus_crigri
ENSRNOG00000010409	Nol6	97	54.144	ENSCVAG00000019497	nol6	97	54.144	Cyprinodon_variegatus
ENSRNOG00000010409	Nol6	97	51.709	ENSDARG00000059711	nol6	96	51.709	Danio_rerio
ENSRNOG00000010409	Nol6	100	77.391	ENSDNOG00000003382	NOL6	99	77.391	Dasypus_novemcinctus
ENSRNOG00000010409	Nol6	100	86.387	ENSDORG00000006018	Nol6	100	86.387	Dipodomys_ordii
ENSRNOG00000010409	Nol6	95	33.304	FBgn0261286	Mat89Ba	91	33.304	Drosophila_melanogaster
ENSRNOG00000010409	Nol6	90	83.049	ENSETEG00000003875	NOL6	90	83.049	Echinops_telfairi
ENSRNOG00000010409	Nol6	89	38.228	ENSEBUG00000005711	nol6	93	38.559	Eptatretus_burgeri
ENSRNOG00000010409	Nol6	100	85.105	ENSEASG00005004206	NOL6	100	85.279	Equus_asinus_asinus
ENSRNOG00000010409	Nol6	100	85.192	ENSECAG00000007914	NOL6	100	85.366	Equus_caballus
ENSRNOG00000010409	Nol6	98	53.222	ENSELUG00000017818	nol6	99	53.222	Esox_lucius
ENSRNOG00000010409	Nol6	100	84.756	ENSFCAG00000006677	NOL6	100	84.756	Felis_catus
ENSRNOG00000010409	Nol6	84	61.515	ENSFALG00000009997	NOL6	100	61.515	Ficedula_albicollis
ENSRNOG00000010409	Nol6	100	84.756	ENSFDAG00000009930	NOL6	100	84.756	Fukomys_damarensis
ENSRNOG00000010409	Nol6	96	54.239	ENSFHEG00000007788	nol6	97	53.812	Fundulus_heteroclitus
ENSRNOG00000010409	Nol6	98	52.585	ENSGMOG00000000637	nol6	99	52.585	Gadus_morhua
ENSRNOG00000010409	Nol6	96	62.170	ENSGALG00000030730	NOL6	99	61.430	Gallus_gallus
ENSRNOG00000010409	Nol6	98	53.750	ENSGAFG00000009378	nol6	98	53.750	Gambusia_affinis
ENSRNOG00000010409	Nol6	97	53.514	ENSGACG00000010296	nol6	98	53.514	Gasterosteus_aculeatus
ENSRNOG00000010409	Nol6	98	63.186	ENSGAGG00000019996	NOL6	99	63.186	Gopherus_agassizii
ENSRNOG00000010409	Nol6	100	86.847	ENSGGOG00000003997	NOL6	100	88.000	Gorilla_gorilla
ENSRNOG00000010409	Nol6	97	54.178	ENSHBUG00000010058	nol6	97	54.178	Haplochromis_burtoni
ENSRNOG00000010409	Nol6	100	84.803	ENSHGLG00000009478	NOL6	99	84.803	Heterocephalus_glaber_female
ENSRNOG00000010409	Nol6	100	84.803	ENSHGLG00100014962	NOL6	99	84.803	Heterocephalus_glaber_male
ENSRNOG00000010409	Nol6	96	51.584	ENSHCOG00000020017	nol6	99	51.403	Hippocampus_comes
ENSRNOG00000010409	Nol6	99	51.399	ENSIPUG00000018266	nol6	99	51.399	Ictalurus_punctatus
ENSRNOG00000010409	Nol6	100	84.891	ENSSTOG00000015854	NOL6	99	84.891	Ictidomys_tridecemlineatus
ENSRNOG00000010409	Nol6	100	84.943	ENSJJAG00000024225	Nol6	99	84.904	Jaculus_jaculus
ENSRNOG00000010409	Nol6	96	54.057	ENSKMAG00000004749	nol6	98	54.057	Kryptolebias_marmoratus
ENSRNOG00000010409	Nol6	97	52.068	ENSLBEG00000006902	nol6	97	52.068	Labrus_bergylta
ENSRNOG00000010409	Nol6	72	51.143	ENSLACG00000006368	NOL6	99	51.143	Latimeria_chalumnae
ENSRNOG00000010409	Nol6	97	50.493	ENSLOCG00000004991	nol6	99	50.493	Lepisosteus_oculatus
ENSRNOG00000010409	Nol6	100	83.930	ENSLAFG00000004990	NOL6	99	83.930	Loxodonta_africana
ENSRNOG00000010409	Nol6	100	86.847	ENSMFAG00000040117	NOL6	100	88.000	Macaca_fascicularis
ENSRNOG00000010409	Nol6	100	86.934	ENSMMUG00000000389	NOL6	100	88.000	Macaca_mulatta
ENSRNOG00000010409	Nol6	100	86.847	ENSMNEG00000040252	NOL6	100	88.000	Macaca_nemestrina
ENSRNOG00000010409	Nol6	100	87.021	ENSMLEG00000043468	NOL6	100	88.000	Mandrillus_leucophaeus
ENSRNOG00000010409	Nol6	99	52.678	ENSMAMG00000011484	nol6	99	52.678	Mastacembelus_armatus
ENSRNOG00000010409	Nol6	97	54.088	ENSMZEG00005014058	nol6	97	54.088	Maylandia_zebra
ENSRNOG00000010409	Nol6	89	52.770	ENSMGAG00000016978	NOL6	100	52.770	Meleagris_gallopavo
ENSRNOG00000010409	Nol6	62	89.341	ENSMAUG00000010790	Nol6	100	89.341	Mesocricetus_auratus
ENSRNOG00000010409	Nol6	100	86.237	ENSMICG00000012157	NOL6	100	86.237	Microcebus_murinus
ENSRNOG00000010409	Nol6	100	89.064	ENSMOCG00000010981	Nol6	99	89.064	Microtus_ochrogaster
ENSRNOG00000010409	Nol6	99	53.122	ENSMMOG00000005625	nol6	99	53.122	Mola_mola
ENSRNOG00000010409	Nol6	100	69.974	ENSMODG00000003802	NOL6	98	69.974	Monodelphis_domestica
ENSRNOG00000010409	Nol6	98	53.333	ENSMALG00000009130	nol6	98	53.333	Monopterus_albus
ENSRNOG00000010409	Nol6	100	93.263	MGP_CAROLIEiJ_G0025907	Nol6	100	93.263	Mus_caroli
ENSRNOG00000010409	Nol6	100	93.351	ENSMUSG00000028430	Nol6	99	93.351	Mus_musculus
ENSRNOG00000010409	Nol6	100	92.826	MGP_PahariEiJ_G0024030	Nol6	99	93.416	Mus_pahari
ENSRNOG00000010409	Nol6	100	93.176	MGP_SPRETEiJ_G0026855	Nol6	99	93.176	Mus_spretus
ENSRNOG00000010409	Nol6	100	80.017	ENSMPUG00000003922	NOL6	99	80.662	Mustela_putorius_furo
ENSRNOG00000010409	Nol6	100	83.795	ENSMLUG00000003230	NOL6	99	83.882	Myotis_lucifugus
ENSRNOG00000010409	Nol6	100	88.276	ENSNGAG00000017803	Nol6	99	88.276	Nannospalax_galili
ENSRNOG00000010409	Nol6	98	53.210	ENSNBRG00000001435	nol6	99	53.210	Neolamprologus_brichardi
ENSRNOG00000010409	Nol6	100	83.492	ENSNLEG00000005056	NOL6	100	83.693	Nomascus_leucogenys
ENSRNOG00000010409	Nol6	99	68.202	ENSMEUG00000004232	NOL6	99	68.202	Notamacropus_eugenii
ENSRNOG00000010409	Nol6	98	81.915	ENSOPRG00000016817	NOL6	100	81.915	Ochotona_princeps
ENSRNOG00000010409	Nol6	100	83.913	ENSODEG00000015856	NOL6	99	83.913	Octodon_degus
ENSRNOG00000010409	Nol6	97	54.095	ENSONIG00000015951	nol6	97	54.095	Oreochromis_niloticus
ENSRNOG00000010409	Nol6	100	52.769	ENSOANG00000010217	-	100	50.847	Ornithorhynchus_anatinus
ENSRNOG00000010409	Nol6	100	84.495	ENSOCUG00000026918	NOL6	99	84.495	Oryctolagus_cuniculus
ENSRNOG00000010409	Nol6	97	53.555	ENSORLG00000010159	nol6	98	53.555	Oryzias_latipes
ENSRNOG00000010409	Nol6	97	53.375	ENSORLG00015023273	nol6	98	53.375	Oryzias_latipes_hsok
ENSRNOG00000010409	Nol6	97	53.363	ENSOMEG00000006877	nol6	98	53.363	Oryzias_melastigma
ENSRNOG00000010409	Nol6	100	84.930	ENSOGAG00000014354	NOL6	100	84.930	Otolemur_garnettii
ENSRNOG00000010409	Nol6	100	84.229	ENSOARG00000009424	NOL6	99	84.229	Ovis_aries
ENSRNOG00000010409	Nol6	100	86.934	ENSPPAG00000040840	NOL6	100	86.934	Pan_paniscus
ENSRNOG00000010409	Nol6	100	84.582	ENSPPRG00000003583	NOL6	100	84.582	Panthera_pardus
ENSRNOG00000010409	Nol6	100	84.233	ENSPTIG00000002752	NOL6	100	84.233	Panthera_tigris_altaica
ENSRNOG00000010409	Nol6	100	86.847	ENSPTRG00000020861	NOL6	100	88.000	Pan_troglodytes
ENSRNOG00000010409	Nol6	100	86.847	ENSPANG00000025310	NOL6	100	88.000	Papio_anubis
ENSRNOG00000010409	Nol6	97	52.453	ENSPKIG00000011418	nol6	98	52.453	Paramormyrops_kingsleyae
ENSRNOG00000010409	Nol6	97	62.254	ENSPSIG00000014763	NOL6	97	62.254	Pelodiscus_sinensis
ENSRNOG00000010409	Nol6	96	51.825	ENSPMGG00000015119	nol6	99	51.825	Periophthalmus_magnuspinnatus
ENSRNOG00000010409	Nol6	100	90.114	ENSPEMG00000011998	Nol6	99	90.114	Peromyscus_maniculatus_bairdii
ENSRNOG00000010409	Nol6	97	70.994	ENSPCIG00000029061	NOL6	99	70.994	Phascolarctos_cinereus
ENSRNOG00000010409	Nol6	99	53.368	ENSPFOG00000003825	nol6	99	53.368	Poecilia_formosa
ENSRNOG00000010409	Nol6	98	54.196	ENSPLAG00000001410	nol6	98	54.196	Poecilia_latipinna
ENSRNOG00000010409	Nol6	99	53.281	ENSPMEG00000021561	nol6	99	53.281	Poecilia_mexicana
ENSRNOG00000010409	Nol6	99	53.152	ENSPREG00000004807	nol6	99	53.152	Poecilia_reticulata
ENSRNOG00000010409	Nol6	100	86.099	ENSPPYG00000019133	NOL6	100	86.099	Pongo_abelii
ENSRNOG00000010409	Nol6	100	86.324	ENSPCOG00000019262	NOL6	100	88.000	Propithecus_coquereli
ENSRNOG00000010409	Nol6	100	81.969	ENSPVAG00000011487	NOL6	100	81.969	Pteropus_vampyrus
ENSRNOG00000010409	Nol6	98	53.527	ENSPNYG00000020726	nol6	99	53.527	Pundamilia_nyererei
ENSRNOG00000010409	Nol6	98	50.573	ENSPNAG00000028102	nol6	99	50.573	Pygocentrus_nattereri
ENSRNOG00000010409	Nol6	100	83.003	ENSRBIG00000016646	NOL6	100	84.000	Rhinopithecus_bieti
ENSRNOG00000010409	Nol6	100	86.585	ENSRROG00000039046	NOL6	100	86.585	Rhinopithecus_roxellana
ENSRNOG00000010409	Nol6	100	86.348	ENSSBOG00000029525	NOL6	100	86.625	Saimiri_boliviensis_boliviensis
ENSRNOG00000010409	Nol6	100	69.471	ENSSHAG00000004050	NOL6	100	69.471	Sarcophilus_harrisii
ENSRNOG00000010409	Nol6	97	52.783	ENSSFOG00015016052	nol6	97	52.783	Scleropages_formosus
ENSRNOG00000010409	Nol6	99	53.070	ENSSMAG00000008757	nol6	99	53.070	Scophthalmus_maximus
ENSRNOG00000010409	Nol6	97	53.957	ENSSDUG00000016772	nol6	97	54.047	Seriola_dumerili
ENSRNOG00000010409	Nol6	97	53.867	ENSSLDG00000017046	nol6	97	53.957	Seriola_lalandi_dorsalis
ENSRNOG00000010409	Nol6	100	78.738	ENSSARG00000010381	NOL6	88	82.633	Sorex_araneus
ENSRNOG00000010409	Nol6	97	61.948	ENSSPUG00000008506	NOL6	97	61.948	Sphenodon_punctatus
ENSRNOG00000010409	Nol6	99	52.900	ENSSPAG00000005542	nol6	99	52.900	Stegastes_partitus
ENSRNOG00000010409	Nol6	100	84.843	ENSSSCG00000010990	NOL6	100	84.843	Sus_scrofa
ENSRNOG00000010409	Nol6	95	61.883	ENSTGUG00000001674	NOL6	100	61.831	Taeniopygia_guttata
ENSRNOG00000010409	Nol6	97	54.245	ENSTRUG00000005694	nol6	98	54.245	Takifugu_rubripes
ENSRNOG00000010409	Nol6	97	53.441	ENSTNIG00000003826	nol6	99	53.441	Tetraodon_nigroviridis
ENSRNOG00000010409	Nol6	84	82.500	ENSTBEG00000003239	NOL6	85	82.500	Tupaia_belangeri
ENSRNOG00000010409	Nol6	92	86.637	ENSTTRG00000010584	NOL6	92	86.637	Tursiops_truncatus
ENSRNOG00000010409	Nol6	100	84.408	ENSUAMG00000025594	NOL6	100	84.756	Ursus_americanus
ENSRNOG00000010409	Nol6	100	84.233	ENSUMAG00000006051	NOL6	100	84.582	Ursus_maritimus
ENSRNOG00000010409	Nol6	98	84.309	ENSVVUG00000021087	NOL6	99	83.516	Vulpes_vulpes
ENSRNOG00000010409	Nol6	97	56.949	ENSXETG00000002153	nol6	99	54.148	Xenopus_tropicalis
ENSRNOG00000010409	Nol6	98	53.839	ENSXMAG00000019408	nol6	98	53.839	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000794	condensed nuclear chromosome	-	ISO	Component
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0006364	rRNA processing	21873635.	IBA	Process
GO:0006409	tRNA export from nucleus	21873635.	IBA	Process
GO:0032040	small-subunit processome	21873635.	IBA	Component
GO:0032545	CURI complex	21873635.	IBA	Component
GO:0034456	UTP-C complex	21873635.	IBA	Component