EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000010436 (Gene tree)
Gene ID: 313666
Gene Symbol: Zbtb17
Alias: LOC313666|Zfp100
Full Name: zinc finger and BTB domain containing 17
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 21097 bases
Position: chr5:159993799-160014895
Accession: 1307143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000014399	zf-C2H2	PF00096.26	1.8e-60	1	10
ENSRNOP00000014399	zf-C2H2	PF00096.26	1.8e-60	2	10
ENSRNOP00000014399	zf-C2H2	PF00096.26	1.8e-60	3	10
ENSRNOP00000014399	zf-C2H2	PF00096.26	1.8e-60	4	10
ENSRNOP00000014399	zf-C2H2	PF00096.26	1.8e-60	5	10
ENSRNOP00000014399	zf-C2H2	PF00096.26	1.8e-60	6	10
ENSRNOP00000014399	zf-C2H2	PF00096.26	1.8e-60	7	10
ENSRNOP00000014399	zf-C2H2	PF00096.26	1.8e-60	8	10
ENSRNOP00000014399	zf-C2H2	PF00096.26	1.8e-60	9	10
ENSRNOP00000014399	zf-C2H2	PF00096.26	1.8e-60	10	10
ENSRNOP00000071596	zf-C2H2	PF00096.26	1.8e-60	1	10
ENSRNOP00000071596	zf-C2H2	PF00096.26	1.8e-60	2	10
ENSRNOP00000071596	zf-C2H2	PF00096.26	1.8e-60	3	10
ENSRNOP00000071596	zf-C2H2	PF00096.26	1.8e-60	4	10
ENSRNOP00000071596	zf-C2H2	PF00096.26	1.8e-60	5	10
ENSRNOP00000071596	zf-C2H2	PF00096.26	1.8e-60	6	10
ENSRNOP00000071596	zf-C2H2	PF00096.26	1.8e-60	7	10
ENSRNOP00000071596	zf-C2H2	PF00096.26	1.8e-60	8	10
ENSRNOP00000071596	zf-C2H2	PF00096.26	1.8e-60	9	10
ENSRNOP00000071596	zf-C2H2	PF00096.26	1.8e-60	10	10
ENSRNOP00000014399	zf-met	PF12874.7	1.6e-11	1	1
ENSRNOP00000071596	zf-met	PF12874.7	1.6e-11	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000014399	-	2769	XM_006239303	ENSRNOP00000014399	801 (aa)	XP_006239365	Q5XIU3
ENSRNOT00000088644	-	2406	XM_008764253	ENSRNOP00000071596	801 (aa)	XP_008762475	Q5XIU3

Gene Model

Click here to download ENSRNOG00000010436's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno04110	Cell cycle	KEGG
rno05200	Pathways in cancer	KEGG
rno05202	Transcriptional misregulation in cancer	KEGG
rno05222	Small cell lung cancer	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000010436's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000010436	Zbtb17	61	38.770	ENSRNOG00000061533	AABR07001926.3	90	39.820
ENSRNOG00000010436	Zbtb17	56	44.444	ENSRNOG00000059956	Bcl6b	75	42.857
ENSRNOG00000010436	Zbtb17	57	42.857	ENSRNOG00000029490	Znf768	52	42.231
ENSRNOG00000010436	Zbtb17	62	43.831	ENSRNOG00000049259	LOC102549842	93	43.831
ENSRNOG00000010436	Zbtb17	62	35.097	ENSRNOG00000013460	Zfp319	90	37.805
ENSRNOG00000010436	Zbtb17	61	41.765	ENSRNOG00000052406	LOC102552527	82	42.274
ENSRNOG00000010436	Zbtb17	55	40.952	ENSRNOG00000014331	Zfp810	85	41.472
ENSRNOG00000010436	Zbtb17	56	43.254	ENSRNOG00000019416	Zfp61	69	43.254
ENSRNOG00000010436	Zbtb17	57	39.564	ENSRNOG00000024056	Zfp17	74	39.050
ENSRNOG00000010436	Zbtb17	67	32.456	ENSRNOG00000016874	Zfp521	70	32.456
ENSRNOG00000010436	Zbtb17	61	40.365	ENSRNOG00000025937	Zfp26	83	43.114
ENSRNOG00000010436	Zbtb17	58	38.070	ENSRNOG00000006684	Zfp317	85	39.710
ENSRNOG00000010436	Zbtb17	80	44.978	ENSRNOG00000027923	Mynn	86	41.176
ENSRNOG00000010436	Zbtb17	88	42.718	ENSRNOG00000009346	Zbtb26	50	42.718
ENSRNOG00000010436	Zbtb17	61	42.598	ENSRNOG00000048394	Zfp560	76	42.598
ENSRNOG00000010436	Zbtb17	58	40.000	ENSRNOG00000014712	Zfp39	61	40.000
ENSRNOG00000010436	Zbtb17	56	40.390	ENSRNOG00000016417	Zfp136	86	38.547
ENSRNOG00000010436	Zbtb17	61	45.070	ENSRNOG00000032625	AC118165.1	100	44.762
ENSRNOG00000010436	Zbtb17	62	42.941	ENSRNOG00000042777	Zfp28	66	42.941
ENSRNOG00000010436	Zbtb17	58	38.849	ENSRNOG00000002713	Zfp672	89	37.003
ENSRNOG00000010436	Zbtb17	55	30.698	ENSRNOG00000055761	Zfp574	74	34.293
ENSRNOG00000010436	Zbtb17	79	32.955	ENSRNOG00000015925	Zfp131	51	42.202
ENSRNOG00000010436	Zbtb17	81	40.385	ENSRNOG00000009340	Zbtb6	57	40.385
ENSRNOG00000010436	Zbtb17	61	41.860	ENSRNOG00000043341	Zfp51	85	41.860
ENSRNOG00000010436	Zbtb17	55	40.385	ENSRNOG00000028628	LOC100911196	78	35.743
ENSRNOG00000010436	Zbtb17	57	38.305	ENSRNOG00000023679	Prdm5	71	38.305
ENSRNOG00000010436	Zbtb17	54	38.710	ENSRNOG00000029980	Zbtb16	60	38.132
ENSRNOG00000010436	Zbtb17	57	39.109	ENSRNOG00000008239	Repin1	83	39.109

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000010436	Zbtb17	97	46.201	ENSACLG00000016405	zbtb17	99	54.440	Astatotilapia_calliptera
ENSRNOG00000010436	Zbtb17	98	93.916	ENSCGRG00001019408	Zbtb17	100	93.516	Cricetulus_griseus_chok1gshd
ENSRNOG00000010436	Zbtb17	57	75.180	ENSEBUG00000014704	ZBTB17	88	75.180	Eptatretus_burgeri
ENSRNOG00000010436	Zbtb17	60	78.020	ENSKMAG00000004080	zbtb17	82	76.527	Kryptolebias_marmoratus
ENSRNOG00000010436	Zbtb17	98	94.924	ENSMAUG00000001376	Zbtb17	100	94.881	Mesocricetus_auratus
ENSRNOG00000010436	Zbtb17	98	85.125	ENSMOCG00000005017	Zbtb17	100	89.545	Microtus_ochrogaster
ENSRNOG00000010436	Zbtb17	80	68.639	ENSMALG00000008493	zbtb17	77	68.639	Monopterus_albus
ENSRNOG00000010436	Zbtb17	100	96.504	MGP_CAROLIEiJ_G0026744	Zbtb17	100	96.504	Mus_caroli
ENSRNOG00000010436	Zbtb17	100	96.754	ENSMUSG00000006215	Zbtb17	100	96.754	Mus_musculus
ENSRNOG00000010436	Zbtb17	100	96.504	MGP_PahariEiJ_G0029075	Zbtb17	100	96.504	Mus_pahari
ENSRNOG00000010436	Zbtb17	100	96.754	MGP_SPRETEiJ_G0027723	Zbtb17	100	96.754	Mus_spretus
ENSRNOG00000010436	Zbtb17	100	89.152	ENSMLUG00000025202	ZBTB17	100	89.027	Myotis_lucifugus
ENSRNOG00000010436	Zbtb17	66	61.977	ENSNBRG00000021960	zbtb17	90	66.412	Neolamprologus_brichardi
ENSRNOG00000010436	Zbtb17	76	79.579	ENSORLG00015022210	zbtb17	83	79.079	Oryzias_latipes_hsok
ENSRNOG00000010436	Zbtb17	72	77.874	ENSOMEG00000011926	zbtb17	77	77.874	Oryzias_melastigma
ENSRNOG00000010436	Zbtb17	100	95.131	ENSPEMG00000021923	Zbtb17	100	95.131	Peromyscus_maniculatus_bairdii
ENSRNOG00000010436	Zbtb17	59	67.257	ENSPREG00000010261	zbtb17	86	77.605	Poecilia_reticulata
ENSRNOG00000010436	Zbtb17	98	89.698	ENSPVAG00000013802	ZBTB17	100	89.493	Pteropus_vampyrus
ENSRNOG00000010436	Zbtb17	68	71.038	ENSPNYG00000012572	zbtb17	78	62.857	Pundamilia_nyererei
ENSRNOG00000010436	Zbtb17	61	78.020	ENSSLDG00000013170	zbtb17	81	78.330	Seriola_lalandi_dorsalis
ENSRNOG00000010436	Zbtb17	77	77.386	ENSTRUG00000003277	zbtb17	98	86.992	Takifugu_rubripes
ENSRNOG00000010436	Zbtb17	97	62.731	ENSTNIG00000010902	zbtb17	64	73.938	Tetraodon_nigroviridis
ENSRNOG00000010436	Zbtb17	76	68.893	ENSTBEG00000005023	-	87	79.878	Tupaia_belangeri

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	-	IEA	Function
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	-	ISO	Function
GO:0001047	core promoter binding	-	IEA	Function
GO:0001047	core promoter binding	-	ISO	Function
GO:0001223	transcription coactivator binding	-	IEA	Function
GO:0001223	transcription coactivator binding	-	ISO	Function
GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	-	IEA	Function
GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	-	ISO	Function
GO:0001702	gastrulation with mouth forming second	-	IEA	Process
GO:0001702	gastrulation with mouth forming second	-	ISO	Process
GO:0003677	DNA binding	-	ISO	Function
GO:0003700	DNA-binding transcription factor activity	-	ISO	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0007398	ectoderm development	-	IEA	Process
GO:0007398	ectoderm development	-	ISO	Process
GO:0008134	transcription factor binding	-	ISO	Function
GO:0008285	negative regulation of cell proliferation	-	IEA	Process
GO:0008285	negative regulation of cell proliferation	-	ISO	Process
GO:0032991	protein-containing complex	-	ISO	Component
GO:0032993	protein-DNA complex	-	IEA	Component
GO:0032993	protein-DNA complex	-	ISO	Component
GO:0045893	positive regulation of transcription, DNA-templated	-	ISO	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0071158	positive regulation of cell cycle arrest	-	IEA	Process
GO:0071158	positive regulation of cell cycle arrest	-	ISO	Process