EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000010528 (Gene tree)
Gene ID: 100911166
Gene Symbol: LOC100911166
Alias: LOC311326|RGD1306147
Full Name: RNA pseudouridylate synthase domain-containing protein 2-like
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 5768 bases
Position: chr3:112519808-112525575
Accession: 6494740
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000014129	PseudoU_synth_2	PF00849.22	9.1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000014129	-	3687	XM_003749554	ENSRNOP00000014129	553 (aa)	XP_003749602	D4ACD4

Gene Model

Click here to download ENSRNOG00000010528's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000010528's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000010528	LOC100911166	100	100.000	ENSRNOG00000046797	Rpusd2	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000010528	LOC100911166	100	75.806	ENSG00000166133	RPUSD2	100	75.806	Homo_sapiens
ENSRNOG00000010528	LOC100911166	78	57.952	ENSAPOG00000000817	rpusd2	84	56.846	Acanthochromis_polyacanthus
ENSRNOG00000010528	LOC100911166	100	77.143	ENSAMEG00000016996	RPUSD2	100	77.143	Ailuropoda_melanoleuca
ENSRNOG00000010528	LOC100911166	78	59.955	ENSACIG00000024029	rpusd2	91	59.259	Amphilophus_citrinellus
ENSRNOG00000010528	LOC100911166	78	57.205	ENSAOCG00000015237	rpusd2	84	56.133	Amphiprion_ocellaris
ENSRNOG00000010528	LOC100911166	78	57.205	ENSAPEG00000021763	rpusd2	84	56.133	Amphiprion_percula
ENSRNOG00000010528	LOC100911166	78	56.303	ENSATEG00000015242	rpusd2	82	55.624	Anabas_testudineus
ENSRNOG00000010528	LOC100911166	76	65.083	ENSAPLG00000004723	RPUSD2	100	64.941	Anas_platyrhynchos
ENSRNOG00000010528	LOC100911166	78	66.966	ENSACAG00000013893	RPUSD2	91	66.966	Anolis_carolinensis
ENSRNOG00000010528	LOC100911166	100	78.075	ENSANAG00000009691	RPUSD2	100	78.075	Aotus_nancymaae
ENSRNOG00000010528	LOC100911166	78	58.351	ENSACLG00000019531	rpusd2	83	57.741	Astatotilapia_calliptera
ENSRNOG00000010528	LOC100911166	78	58.058	ENSAMXG00000013376	rpusd2	99	50.656	Astyanax_mexicanus
ENSRNOG00000010528	LOC100911166	96	78.131	ENSBTAG00000003193	RPUSD2	96	78.505	Bos_taurus
ENSRNOG00000010528	LOC100911166	72	35.606	WBGene00019498	K07E8.7	97	35.606	Caenorhabditis_elegans
ENSRNOG00000010528	LOC100911166	100	77.599	ENSCJAG00000020841	RPUSD2	100	77.599	Callithrix_jacchus
ENSRNOG00000010528	LOC100911166	100	76.523	ENSCAFG00000009165	RPUSD2	100	76.523	Canis_familiaris
ENSRNOG00000010528	LOC100911166	100	76.523	ENSCAFG00020005849	RPUSD2	100	76.523	Canis_lupus_dingo
ENSRNOG00000010528	LOC100911166	96	77.757	ENSCHIG00000006152	RPUSD2	96	78.131	Capra_hircus
ENSRNOG00000010528	LOC100911166	100	75.986	ENSTSYG00000012844	RPUSD2	100	75.986	Carlito_syrichta
ENSRNOG00000010528	LOC100911166	51	85.017	ENSCAPG00000006895	-	100	85.017	Cavia_aperea
ENSRNOG00000010528	LOC100911166	99	76.951	ENSCPOG00000013201	RPUSD2	99	76.951	Cavia_porcellus
ENSRNOG00000010528	LOC100911166	100	77.957	ENSCCAG00000024378	RPUSD2	100	77.957	Cebus_capucinus
ENSRNOG00000010528	LOC100911166	100	76.165	ENSCATG00000043734	RPUSD2	100	76.165	Cercocebus_atys
ENSRNOG00000010528	LOC100911166	99	78.755	ENSCLAG00000011862	RPUSD2	99	78.755	Chinchilla_lanigera
ENSRNOG00000010528	LOC100911166	94	78.154	ENSCSAG00000007538	RPUSD2	100	79.198	Chlorocebus_sabaeus
ENSRNOG00000010528	LOC100911166	61	83.382	ENSCHOG00000004834	RPUSD2	63	84.257	Choloepus_hoffmanni
ENSRNOG00000010528	LOC100911166	83	62.600	ENSCPBG00000013419	RPUSD2	93	62.600	Chrysemys_picta_bellii
ENSRNOG00000010528	LOC100911166	63	33.807	ENSCSAVG00000007812	-	99	33.807	Ciona_savignyi
ENSRNOG00000010528	LOC100911166	100	76.344	ENSCANG00000003659	RPUSD2	100	76.344	Colobus_angolensis_palliatus
ENSRNOG00000010528	LOC100911166	100	86.282	ENSCGRG00001009839	Rpusd2	97	86.282	Cricetulus_griseus_chok1gshd
ENSRNOG00000010528	LOC100911166	100	86.282	ENSCGRG00000012348	Rpusd2	100	86.282	Cricetulus_griseus_crigri
ENSRNOG00000010528	LOC100911166	83	56.033	ENSCSEG00000001953	rpusd2	84	56.033	Cynoglossus_semilaevis
ENSRNOG00000010528	LOC100911166	82	56.667	ENSCVAG00000010848	rpusd2	88	56.674	Cyprinodon_variegatus
ENSRNOG00000010528	LOC100911166	78	59.389	ENSDARG00000060992	rpusd2	80	58.861	Danio_rerio
ENSRNOG00000010528	LOC100911166	100	75.045	ENSDNOG00000047745	RPUSD2	100	75.045	Dasypus_novemcinctus
ENSRNOG00000010528	LOC100911166	78	86.311	ENSDORG00000009092	Rpusd2	100	86.311	Dipodomys_ordii
ENSRNOG00000010528	LOC100911166	76	48.506	FBgn0032256	RluA-2	78	48.506	Drosophila_melanogaster
ENSRNOG00000010528	LOC100911166	76	47.323	FBgn0051719	RluA-1	63	47.323	Drosophila_melanogaster
ENSRNOG00000010528	LOC100911166	100	72.222	ENSETEG00000008581	RPUSD2	100	72.222	Echinops_telfairi
ENSRNOG00000010528	LOC100911166	75	35.927	ENSEBUG00000012149	rpusd2	89	34.924	Eptatretus_burgeri
ENSRNOG00000010528	LOC100911166	100	76.344	ENSEASG00005016463	RPUSD2	99	76.344	Equus_asinus_asinus
ENSRNOG00000010528	LOC100911166	100	76.523	ENSECAG00000024178	RPUSD2	99	76.523	Equus_caballus
ENSRNOG00000010528	LOC100911166	96	66.168	ENSEEUG00000005132	RPUSD2	96	66.168	Erinaceus_europaeus
ENSRNOG00000010528	LOC100911166	80	57.717	ENSELUG00000016786	rpusd2	85	57.717	Esox_lucius
ENSRNOG00000010528	LOC100911166	100	77.718	ENSFCAG00000040796	RPUSD2	100	77.718	Felis_catus
ENSRNOG00000010528	LOC100911166	77	68.254	ENSFALG00000001122	RPUSD2	96	68.374	Ficedula_albicollis
ENSRNOG00000010528	LOC100911166	94	77.863	ENSFDAG00000003070	RPUSD2	100	77.863	Fukomys_damarensis
ENSRNOG00000010528	LOC100911166	87	55.800	ENSFHEG00000007518	rpusd2	91	55.800	Fundulus_heteroclitus
ENSRNOG00000010528	LOC100911166	78	58.515	ENSGMOG00000011014	rpusd2	97	57.113	Gadus_morhua
ENSRNOG00000010528	LOC100911166	83	63.525	ENSGALG00000041216	RPUSD2	99	63.525	Gallus_gallus
ENSRNOG00000010528	LOC100911166	85	57.563	ENSGAFG00000003390	rpusd2	85	57.563	Gambusia_affinis
ENSRNOG00000010528	LOC100911166	89	52.462	ENSGACG00000008656	rpusd2	98	52.462	Gasterosteus_aculeatus
ENSRNOG00000010528	LOC100911166	88	63.286	ENSGAGG00000013098	RPUSD2	95	63.286	Gopherus_agassizii
ENSRNOG00000010528	LOC100911166	100	75.627	ENSGGOG00000006684	RPUSD2	100	75.627	Gorilla_gorilla
ENSRNOG00000010528	LOC100911166	78	58.134	ENSHBUG00000023777	rpusd2	83	57.531	Haplochromis_burtoni
ENSRNOG00000010528	LOC100911166	99	77.555	ENSHGLG00000012765	RPUSD2	99	77.555	Heterocephalus_glaber_female
ENSRNOG00000010528	LOC100911166	99	77.555	ENSHGLG00100006653	RPUSD2	99	77.555	Heterocephalus_glaber_male
ENSRNOG00000010528	LOC100911166	88	54.264	ENSHCOG00000015587	rpusd2	88	54.264	Hippocampus_comes
ENSRNOG00000010528	LOC100911166	87	56.436	ENSIPUG00000021006	rpusd2	86	56.436	Ictalurus_punctatus
ENSRNOG00000010528	LOC100911166	100	78.354	ENSSTOG00000025619	RPUSD2	100	78.354	Ictidomys_tridecemlineatus
ENSRNOG00000010528	LOC100911166	100	77.297	ENSJJAG00000023160	Rpusd2	100	78.198	Jaculus_jaculus
ENSRNOG00000010528	LOC100911166	78	57.883	ENSKMAG00000006618	rpusd2	85	55.336	Kryptolebias_marmoratus
ENSRNOG00000010528	LOC100911166	78	55.991	ENSLBEG00000021571	rpusd2	88	53.571	Labrus_bergylta
ENSRNOG00000010528	LOC100911166	78	63.816	ENSLACG00000017338	RPUSD2	100	63.816	Latimeria_chalumnae
ENSRNOG00000010528	LOC100911166	78	63.098	ENSLOCG00000014755	rpusd2	93	62.256	Lepisosteus_oculatus
ENSRNOG00000010528	LOC100911166	98	77.049	ENSLAFG00000015588	RPUSD2	99	77.049	Loxodonta_africana
ENSRNOG00000010528	LOC100911166	100	76.165	ENSMFAG00000045062	RPUSD2	100	76.165	Macaca_fascicularis
ENSRNOG00000010528	LOC100911166	100	76.344	ENSMMUG00000001483	RPUSD2	100	76.344	Macaca_mulatta
ENSRNOG00000010528	LOC100911166	100	67.082	ENSMNEG00000041429	RPUSD2	100	67.082	Macaca_nemestrina
ENSRNOG00000010528	LOC100911166	73	84.548	ENSMLEG00000036551	RPUSD2	97	84.548	Mandrillus_leucophaeus
ENSRNOG00000010528	LOC100911166	78	56.159	ENSMAMG00000001077	rpusd2	82	55.179	Mastacembelus_armatus
ENSRNOG00000010528	LOC100911166	78	58.351	ENSMZEG00005006947	rpusd2	91	57.741	Maylandia_zebra
ENSRNOG00000010528	LOC100911166	80	68.315	ENSMGAG00000003058	RPUSD2	98	68.315	Meleagris_gallopavo
ENSRNOG00000010528	LOC100911166	100	87.726	ENSMAUG00000020467	Rpusd2	100	87.726	Mesocricetus_auratus
ENSRNOG00000010528	LOC100911166	99	77.636	ENSMICG00000028637	RPUSD2	99	77.636	Microcebus_murinus
ENSRNOG00000010528	LOC100911166	100	85.072	ENSMOCG00000020061	Rpusd2	100	85.072	Microtus_ochrogaster
ENSRNOG00000010528	LOC100911166	78	58.482	ENSMMOG00000012020	rpusd2	95	51.159	Mola_mola
ENSRNOG00000010528	LOC100911166	84	75.264	ENSMODG00000000300	RPUSD2	87	75.264	Monodelphis_domestica
ENSRNOG00000010528	LOC100911166	78	55.485	ENSMALG00000010024	rpusd2	88	52.762	Monopterus_albus
ENSRNOG00000010528	LOC100911166	100	93.490	MGP_CAROLIEiJ_G0024130	Rpusd2	100	93.490	Mus_caroli
ENSRNOG00000010528	LOC100911166	100	93.490	ENSMUSG00000027324	Rpusd2	100	93.490	Mus_musculus
ENSRNOG00000010528	LOC100911166	100	92.948	MGP_PahariEiJ_G0025573	Rpusd2	100	92.948	Mus_pahari
ENSRNOG00000010528	LOC100911166	100	92.767	MGP_SPRETEiJ_G0025046	Rpusd2	100	92.767	Mus_spretus
ENSRNOG00000010528	LOC100911166	100	76.827	ENSMPUG00000008517	RPUSD2	100	76.827	Mustela_putorius_furo
ENSRNOG00000010528	LOC100911166	94	79.198	ENSMLUG00000007971	RPUSD2	99	79.198	Myotis_lucifugus
ENSRNOG00000010528	LOC100911166	100	79.856	ENSNGAG00000014126	Rpusd2	100	79.856	Nannospalax_galili
ENSRNOG00000010528	LOC100911166	78	59.142	ENSNBRG00000010070	rpusd2	82	58.478	Neolamprologus_brichardi
ENSRNOG00000010528	LOC100911166	100	76.165	ENSNLEG00000035735	RPUSD2	100	76.165	Nomascus_leucogenys
ENSRNOG00000010528	LOC100911166	86	74.174	ENSMEUG00000008500	RPUSD2	93	74.174	Notamacropus_eugenii
ENSRNOG00000010528	LOC100911166	100	74.199	ENSOPRG00000014177	-	100	74.199	Ochotona_princeps
ENSRNOG00000010528	LOC100911166	96	81.015	ENSODEG00000017193	RPUSD2	97	81.015	Octodon_degus
ENSRNOG00000010528	LOC100911166	78	59.862	ENSONIG00000020102	rpusd2	91	59.161	Oreochromis_niloticus
ENSRNOG00000010528	LOC100911166	100	77.419	ENSOCUG00000015745	RPUSD2	97	77.419	Oryctolagus_cuniculus
ENSRNOG00000010528	LOC100911166	80	59.202	ENSORLG00000015516	rpusd2	83	59.202	Oryzias_latipes
ENSRNOG00000010528	LOC100911166	80	58.590	ENSORLG00020010533	rpusd2	83	58.590	Oryzias_latipes_hni
ENSRNOG00000010528	LOC100911166	80	58.811	ENSORLG00015009206	rpusd2	82	58.811	Oryzias_latipes_hsok
ENSRNOG00000010528	LOC100911166	78	59.080	ENSOMEG00000007355	rpusd2	75	58.482	Oryzias_melastigma
ENSRNOG00000010528	LOC100911166	96	78.318	ENSOGAG00000004867	RPUSD2	100	78.318	Otolemur_garnettii
ENSRNOG00000010528	LOC100911166	96	76.449	ENSOARG00000020235	RPUSD2	96	77.757	Ovis_aries
ENSRNOG00000010528	LOC100911166	100	76.165	ENSPPAG00000032874	RPUSD2	100	76.165	Pan_paniscus
ENSRNOG00000010528	LOC100911166	100	78.495	ENSPPRG00000010446	RPUSD2	100	78.495	Panthera_pardus
ENSRNOG00000010528	LOC100911166	100	78.495	ENSPTIG00000013316	RPUSD2	100	78.495	Panthera_tigris_altaica
ENSRNOG00000010528	LOC100911166	100	76.165	ENSPTRG00000006924	RPUSD2	100	76.165	Pan_troglodytes
ENSRNOG00000010528	LOC100911166	100	75.806	ENSPANG00000019339	RPUSD2	100	75.806	Papio_anubis
ENSRNOG00000010528	LOC100911166	76	67.582	ENSPKIG00000023017	rpusd2	62	67.391	Paramormyrops_kingsleyae
ENSRNOG00000010528	LOC100911166	61	64.368	ENSPSIG00000012680	RPUSD2	99	64.368	Pelodiscus_sinensis
ENSRNOG00000010528	LOC100911166	78	58.199	ENSPMGG00000018165	rpusd2	80	57.461	Periophthalmus_magnuspinnatus
ENSRNOG00000010528	LOC100911166	99	84.448	ENSPEMG00000012878	Rpusd2	99	84.448	Peromyscus_maniculatus_bairdii
ENSRNOG00000010528	LOC100911166	84	75.161	ENSPCIG00000023199	RPUSD2	86	75.161	Phascolarctos_cinereus
ENSRNOG00000010528	LOC100911166	87	56.452	ENSPFOG00000006829	rpusd2	88	56.452	Poecilia_formosa
ENSRNOG00000010528	LOC100911166	81	59.211	ENSPLAG00000022914	rpusd2	94	59.211	Poecilia_latipinna
ENSRNOG00000010528	LOC100911166	87	56.452	ENSPMEG00000009835	rpusd2	99	56.452	Poecilia_mexicana
ENSRNOG00000010528	LOC100911166	87	56.531	ENSPREG00000016441	rpusd2	85	56.531	Poecilia_reticulata
ENSRNOG00000010528	LOC100911166	100	76.882	ENSPPYG00000006355	RPUSD2	100	76.882	Pongo_abelii
ENSRNOG00000010528	LOC100911166	99	76.630	ENSPCOG00000028019	RPUSD2	99	76.630	Propithecus_coquereli
ENSRNOG00000010528	LOC100911166	100	75.986	ENSPVAG00000001837	RPUSD2	100	75.986	Pteropus_vampyrus
ENSRNOG00000010528	LOC100911166	78	60.460	ENSPNYG00000021507	rpusd2	90	59.735	Pundamilia_nyererei
ENSRNOG00000010528	LOC100911166	100	76.523	ENSRBIG00000030813	RPUSD2	100	76.523	Rhinopithecus_bieti
ENSRNOG00000010528	LOC100911166	100	76.344	ENSRROG00000026664	RPUSD2	100	76.344	Rhinopithecus_roxellana
ENSRNOG00000010528	LOC100911166	50	46.853	YDL036C	-	61	46.853	Saccharomyces_cerevisiae
ENSRNOG00000010528	LOC100911166	52	47.635	YOL066C	RIB2	50	47.635	Saccharomyces_cerevisiae
ENSRNOG00000010528	LOC100911166	100	77.061	ENSSBOG00000035031	RPUSD2	100	77.778	Saimiri_boliviensis_boliviensis
ENSRNOG00000010528	LOC100911166	61	75.291	ENSSHAG00000015108	RPUSD2	91	75.291	Sarcophilus_harrisii
ENSRNOG00000010528	LOC100911166	77	70.517	ENSSFOG00015019057	rpusd2	70	65.147	Scleropages_formosus
ENSRNOG00000010528	LOC100911166	80	56.965	ENSSMAG00000000903	rpusd2	91	56.965	Scophthalmus_maximus
ENSRNOG00000010528	LOC100911166	78	56.250	ENSSDUG00000019139	rpusd2	91	52.641	Seriola_dumerili
ENSRNOG00000010528	LOC100911166	78	56.042	ENSSLDG00000005938	rpusd2	91	52.459	Seriola_lalandi_dorsalis
ENSRNOG00000010528	LOC100911166	86	81.913	ENSSARG00000002792	RPUSD2	88	81.913	Sorex_araneus
ENSRNOG00000010528	LOC100911166	83	61.538	ENSSPUG00000001206	RPUSD2	94	61.538	Sphenodon_punctatus
ENSRNOG00000010528	LOC100911166	78	56.987	ENSSPAG00000003578	rpusd2	83	56.421	Stegastes_partitus
ENSRNOG00000010528	LOC100911166	96	80.038	ENSSSCG00000036700	RPUSD2	96	80.038	Sus_scrofa
ENSRNOG00000010528	LOC100911166	78	55.150	ENSTRUG00000025880	rpusd2	96	53.033	Takifugu_rubripes
ENSRNOG00000010528	LOC100911166	78	58.652	ENSTNIG00000017329	rpusd2	91	58.079	Tetraodon_nigroviridis
ENSRNOG00000010528	LOC100911166	100	69.176	ENSTBEG00000007933	RPUSD2	100	69.176	Tupaia_belangeri
ENSRNOG00000010528	LOC100911166	96	79.664	ENSTTRG00000010585	RPUSD2	96	79.664	Tursiops_truncatus
ENSRNOG00000010528	LOC100911166	94	79.962	ENSUAMG00000001470	RPUSD2	100	79.962	Ursus_americanus
ENSRNOG00000010528	LOC100911166	100	77.061	ENSUMAG00000012487	RPUSD2	88	77.061	Ursus_maritimus
ENSRNOG00000010528	LOC100911166	96	78.172	ENSVPAG00000003844	RPUSD2	96	78.172	Vicugna_pacos
ENSRNOG00000010528	LOC100911166	100	76.523	ENSVVUG00000026590	RPUSD2	100	76.523	Vulpes_vulpes
ENSRNOG00000010528	LOC100911166	82	65.885	ENSXETG00000015973	rpusd2	100	65.885	Xenopus_tropicalis
ENSRNOG00000010528	LOC100911166	87	56.148	ENSXMAG00000021821	rpusd2	99	56.148	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001522	pseudouridine synthesis	-	IEA	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0009982	pseudouridine synthase activity	-	IEA	Function