EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000010719 (Gene tree)
Gene ID
313707
Gene Symbol
Exosc10
Alias
LOC313707|PM/Scl100
Full Name
exosome component 10
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Plus strand
Length
23267 bases
Position
chr5:165374951-165398217
Accession
1593248
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000014629HRDCPF00570.234.3e-1411
ENSRNOP00000014629PMC2NTPF08066.127.6e-2311
ENSRNOP00000014629DNA_pol_A_exo1PF01612.208.2e-4911
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000014629-2825XM_003750088ENSRNOP00000014629885 (aa)XP_003750136D4A1X2
Gene Model
Click here to download ENSRNOG00000010719's gene model file
Pathways
Pathway IDPathway NameSource
rno03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000010719's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000010719Exosc1010087.133ENSG00000171824EXOSC1010090.323Homo_sapiens
ENSRNOG00000010719Exosc109762.329ENSAPOG00000013304exosc109762.045Acanthochromis_polyacanthus
ENSRNOG00000010719Exosc1010086.486ENSAMEG00000009546EXOSC1010086.486Ailuropoda_melanoleuca
ENSRNOG00000010719Exosc109359.518ENSACIG00000020455exosc109559.639Amphilophus_citrinellus
ENSRNOG00000010719Exosc109760.301ENSAOCG00000018823exosc109760.441Amphiprion_ocellaris
ENSRNOG00000010719Exosc109761.872ENSAPEG00000017786exosc109661.872Amphiprion_percula
ENSRNOG00000010719Exosc109861.204ENSATEG00000017271exosc109861.798Anabas_testudineus
ENSRNOG00000010719Exosc109871.068ENSAPLG00000006652EXOSC1010071.068Anas_platyrhynchos
ENSRNOG00000010719Exosc1010081.828ENSANAG00000031112EXOSC1010081.828Aotus_nancymaae
ENSRNOG00000010719Exosc109860.544ENSACLG00000025226exosc109761.048Astatotilapia_calliptera
ENSRNOG00000010719Exosc1010058.170ENSAMXG00000014510exosc1010058.170Astyanax_mexicanus
ENSRNOG00000010719Exosc107889.065ENSBTAG00000002590EXOSC109989.065Bos_taurus
ENSRNOG00000010719Exosc106136.266WBGene00000796crn-36136.266Caenorhabditis_elegans
ENSRNOG00000010719Exosc1010086.456ENSCJAG00000002327EXOSC1010086.456Callithrix_jacchus
ENSRNOG00000010719Exosc1010087.500ENSCAFG00000016721EXOSC109887.162Canis_familiaris
ENSRNOG00000010719Exosc1010087.500ENSCAFG00020002481EXOSC109887.162Canis_lupus_dingo
ENSRNOG00000010719Exosc1010082.638ENSCHIG00000020022EXOSC1010082.413Capra_hircus
ENSRNOG00000010719Exosc1010082.638ENSTSYG00000006937EXOSC1010082.187Carlito_syrichta
ENSRNOG00000010719Exosc109687.427ENSCAPG00000006494EXOSC109987.573Cavia_aperea
ENSRNOG00000010719Exosc1010086.922ENSCPOG00000011628EXOSC109887.148Cavia_porcellus
ENSRNOG00000010719Exosc1010080.246ENSCCAG00000023223EXOSC1010086.800Cebus_capucinus
ENSRNOG00000010719Exosc1010087.133ENSCATG00000039000EXOSC1010087.133Cercocebus_atys
ENSRNOG00000010719Exosc1010087.486ENSCLAG00000005283EXOSC1010087.711Chinchilla_lanigera
ENSRNOG00000010719Exosc1010086.795ENSCSAG00000000788EXOSC1010086.795Chlorocebus_sabaeus
ENSRNOG00000010719Exosc109780.626ENSCHOG00000012713EXOSC1010081.279Choloepus_hoffmanni
ENSRNOG00000010719Exosc109873.708ENSCPBG00000022004EXOSC109673.708Chrysemys_picta_bellii
ENSRNOG00000010719Exosc106647.395ENSCSAVG00000009049-10047.395Ciona_savignyi
ENSRNOG00000010719Exosc1010086.343ENSCANG00000042813EXOSC1010086.343Colobus_angolensis_palliatus
ENSRNOG00000010719Exosc1010094.011ENSCGRG00001018469Exosc1010094.011Cricetulus_griseus_chok1gshd
ENSRNOG00000010719Exosc1010093.785ENSCGRG00000002278Exosc1010093.785Cricetulus_griseus_crigri
ENSRNOG00000010719Exosc109959.663ENSCSEG00000005346exosc109760.339Cynoglossus_semilaevis
ENSRNOG00000010719Exosc109761.661ENSCVAG00000016429exosc109960.845Cyprinodon_variegatus
ENSRNOG00000010719Exosc109758.963ENSDARG00000037708exosc109858.869Danio_rerio
ENSRNOG00000010719Exosc1010086.374ENSDNOG00000011301EXOSC1010086.374Dasypus_novemcinctus
ENSRNOG00000010719Exosc1010082.074ENSDORG00000003769Exosc1010082.074Dipodomys_ordii
ENSRNOG00000010719Exosc106641.294FBgn0038269Rrp66940.030Drosophila_melanogaster
ENSRNOG00000010719Exosc109682.339ENSETEG00000000830EXOSC1010082.084Echinops_telfairi
ENSRNOG00000010719Exosc107235.420ENSEBUG00000004395exosc109935.267Eptatretus_burgeri
ENSRNOG00000010719Exosc109987.031ENSEASG00005018716EXOSC109692.110Equus_asinus_asinus
ENSRNOG00000010719Exosc1010087.838ENSECAG00000011639EXOSC1010087.838Equus_caballus
ENSRNOG00000010719Exosc108381.760ENSEEUG00000001166EXOSC108681.760Erinaceus_europaeus
ENSRNOG00000010719Exosc109761.379ENSELUG00000012870exosc109561.724Esox_lucius
ENSRNOG00000010719Exosc1010086.584ENSFCAG00000000052EXOSC1010086.133Felis_catus
ENSRNOG00000010719Exosc109768.922ENSFALG00000010287EXOSC109768.922Ficedula_albicollis
ENSRNOG00000010719Exosc1010088.739ENSFDAG00000002942EXOSC1010088.739Fukomys_damarensis
ENSRNOG00000010719Exosc109859.122ENSFHEG00000010678exosc109860.292Fundulus_heteroclitus
ENSRNOG00000010719Exosc108264.880ENSGMOG00000006131exosc108964.880Gadus_morhua
ENSRNOG00000010719Exosc109870.857ENSGALG00000003086EXOSC109670.857Gallus_gallus
ENSRNOG00000010719Exosc109760.455ENSGAFG00000019222exosc109860.637Gambusia_affinis
ENSRNOG00000010719Exosc109960.223ENSGACG00000007037exosc109960.157Gasterosteus_aculeatus
ENSRNOG00000010719Exosc109873.479ENSGAGG00000000251EXOSC1010073.177Gopherus_agassizii
ENSRNOG00000010719Exosc1010086.907ENSGGOG00000010572EXOSC1010086.907Gorilla_gorilla
ENSRNOG00000010719Exosc109858.295ENSHBUG00000020328exosc109758.523Haplochromis_burtoni
ENSRNOG00000010719Exosc1010088.839ENSHGLG00000011944EXOSC1010088.839Heterocephalus_glaber_female
ENSRNOG00000010719Exosc1010088.839ENSHGLG00100014444EXOSC1010088.839Heterocephalus_glaber_male
ENSRNOG00000010719Exosc109860.316ENSHCOG00000016164exosc109860.835Hippocampus_comes
ENSRNOG00000010719Exosc109759.276ENSIPUG00000021971exosc109659.276Ictalurus_punctatus
ENSRNOG00000010719Exosc1010089.402ENSSTOG00000005459EXOSC1010089.064Ictidomys_tridecemlineatus
ENSRNOG00000010719Exosc1010088.501ENSJJAG00000013716Exosc1010088.501Jaculus_jaculus
ENSRNOG00000010719Exosc109761.003ENSKMAG00000015540exosc109760.939Kryptolebias_marmoratus
ENSRNOG00000010719Exosc109760.633ENSLBEG00000022229exosc109760.978Labrus_bergylta
ENSRNOG00000010719Exosc1010066.149ENSLACG00000016691EXOSC1010066.260Latimeria_chalumnae
ENSRNOG00000010719Exosc109766.171ENSLOCG00000006443exosc109765.714Lepisosteus_oculatus
ENSRNOG00000010719Exosc1010086.952ENSLAFG00000016894EXOSC1010086.839Loxodonta_africana
ENSRNOG00000010719Exosc1010087.020ENSMFAG00000038874EXOSC1010084.876Macaca_fascicularis
ENSRNOG00000010719Exosc1010086.907ENSMMUG00000019322EXOSC1010086.907Macaca_mulatta
ENSRNOG00000010719Exosc1010087.020ENSMNEG00000035812EXOSC1010087.020Macaca_nemestrina
ENSRNOG00000010719Exosc1010087.133ENSMLEG00000025160EXOSC1010087.133Mandrillus_leucophaeus
ENSRNOG00000010719Exosc109660.875ENSMAMG00000019375exosc109760.990Mastacembelus_armatus
ENSRNOG00000010719Exosc109860.544ENSMZEG00005013730exosc109761.048Maylandia_zebra
ENSRNOG00000010719Exosc109670.465ENSMGAG00000004665EXOSC109970.465Meleagris_gallopavo
ENSRNOG00000010719Exosc106897.333ENSMAUG00000019261Exosc109797.333Mesocricetus_auratus
ENSRNOG00000010719Exosc1010087.260ENSMICG00000003858EXOSC1010087.260Microcebus_murinus
ENSRNOG00000010719Exosc106896.667ENSMOCG00000016509Exosc109796.667Microtus_ochrogaster
ENSRNOG00000010719Exosc109958.931ENSMMOG00000009265exosc109858.703Mola_mola
ENSRNOG00000010719Exosc109778.035ENSMODG00000011194EXOSC1010076.431Monodelphis_domestica
ENSRNOG00000010719Exosc109860.473ENSMALG00000021322exosc109860.090Monopterus_albus
ENSRNOG00000010719Exosc1010095.152MGP_CAROLIEiJ_G0026802Exosc1010094.814Mus_caroli
ENSRNOG00000010719Exosc1010095.265ENSMUSG00000017264Exosc1010094.927Mus_musculus
ENSRNOG00000010719Exosc1010095.378MGP_PahariEiJ_G0029150Exosc1010095.039Mus_pahari
ENSRNOG00000010719Exosc1010095.152MGP_SPRETEiJ_G0027795Exosc1010094.814Mus_spretus
ENSRNOG00000010719Exosc1010087.486ENSMPUG00000016434EXOSC109787.260Mustela_putorius_furo
ENSRNOG00000010719Exosc1010086.824ENSMLUG00000004276EXOSC1010086.824Myotis_lucifugus
ENSRNOG00000010719Exosc1010090.530ENSNGAG00000023829Exosc1010090.417Nannospalax_galili
ENSRNOG00000010719Exosc109859.013ENSNBRG00000006256exosc109758.641Neolamprologus_brichardi
ENSRNOG00000010719Exosc109986.379ENSNLEG00000009539EXOSC109986.621Nomascus_leucogenys
ENSRNOG00000010719Exosc1073100.000ENSMEUG00000007020-73100.000Notamacropus_eugenii
ENSRNOG00000010719Exosc1010084.027ENSOPRG00000012091EXOSC1010083.915Ochotona_princeps
ENSRNOG00000010719Exosc1010088.050ENSODEG00000013285EXOSC1010088.050Octodon_degus
ENSRNOG00000010719Exosc108563.494ENSONIG00000002322exosc109663.178Oreochromis_niloticus
ENSRNOG00000010719Exosc109973.732ENSOANG00000013322EXOSC109973.274Ornithorhynchus_anatinus
ENSRNOG00000010719Exosc1010086.052ENSOCUG00000013039EXOSC1010086.517Oryctolagus_cuniculus
ENSRNOG00000010719Exosc109861.023ENSORLG00000005117exosc1010061.077Oryzias_latipes
ENSRNOG00000010719Exosc109861.023ENSORLG00020013529exosc109663.150Oryzias_latipes_hni
ENSRNOG00000010719Exosc109861.477ENSORLG00015005525exosc109761.206Oryzias_latipes_hsok
ENSRNOG00000010719Exosc109860.181ENSOMEG00000003337exosc109860.181Oryzias_melastigma
ENSRNOG00000010719Exosc1010078.876ENSOGAG00000013662EXOSC1010078.876Otolemur_garnettii
ENSRNOG00000010719Exosc1010086.420ENSOARG00000003668EXOSC1010086.195Ovis_aries
ENSRNOG00000010719Exosc1010086.404ENSPPAG00000038356EXOSC1010086.644Pan_paniscus
ENSRNOG00000010719Exosc1010086.697ENSPPRG00000022976EXOSC1010086.246Panthera_pardus
ENSRNOG00000010719Exosc109685.229ENSPTIG00000012735EXOSC109984.291Panthera_tigris_altaica
ENSRNOG00000010719Exosc1010083.296ENSPTRG00000000140EXOSC1010083.296Pan_troglodytes
ENSRNOG00000010719Exosc1010085.779ENSPANG00000026088EXOSC1010085.779Papio_anubis
ENSRNOG00000010719Exosc109859.226ENSPKIG00000013098exosc109659.681Paramormyrops_kingsleyae
ENSRNOG00000010719Exosc109873.218ENSPSIG00000005078EXOSC109673.333Pelodiscus_sinensis
ENSRNOG00000010719Exosc106569.217ENSPMGG00000022241exosc109669.217Periophthalmus_magnuspinnatus
ENSRNOG00000010719Exosc107996.423ENSPEMG00000007753Exosc109896.423Peromyscus_maniculatus_bairdii
ENSRNOG00000010719Exosc105653.333ENSPMAG00000006909exosc1010053.333Petromyzon_marinus
ENSRNOG00000010719Exosc109672.009ENSPCIG00000004840EXOSC109482.542Phascolarctos_cinereus
ENSRNOG00000010719Exosc109861.149ENSPFOG00000004744exosc109861.218Poecilia_formosa
ENSRNOG00000010719Exosc109860.923ENSPLAG00000010253exosc109860.992Poecilia_latipinna
ENSRNOG00000010719Exosc109861.149ENSPMEG00000005740exosc109861.218Poecilia_mexicana
ENSRNOG00000010719Exosc109861.149ENSPREG00000016285exosc109861.261Poecilia_reticulata
ENSRNOG00000010719Exosc1010086.569ENSPPYG00000001891EXOSC109786.569Pongo_abelii
ENSRNOG00000010719Exosc108975.723ENSPCAG00000001583EXOSC1010074.969Procavia_capensis
ENSRNOG00000010719Exosc1010087.486ENSPCOG00000013742EXOSC1010087.486Propithecus_coquereli
ENSRNOG00000010719Exosc1010087.064ENSPVAG00000014780EXOSC1010087.064Pteropus_vampyrus
ENSRNOG00000010719Exosc109860.658ENSPNYG00000007387exosc109761.162Pundamilia_nyererei
ENSRNOG00000010719Exosc109859.156ENSPNAG00000028864exosc109859.378Pygocentrus_nattereri
ENSRNOG00000010719Exosc1010076.185ENSRBIG00000039772EXOSC1010076.185Rhinopithecus_bieti
ENSRNOG00000010719Exosc1010086.795ENSRROG00000036700EXOSC1010086.795Rhinopithecus_roxellana
ENSRNOG00000010719Exosc106332.696YOR001W-7132.696Saccharomyces_cerevisiae
ENSRNOG00000010719Exosc109879.884ENSSBOG00000020768EXOSC1010080.116Saimiri_boliviensis_boliviensis
ENSRNOG00000010719Exosc109676.643ENSSHAG00000013572EXOSC1010076.851Sarcophilus_harrisii
ENSRNOG00000010719Exosc109561.340ENSSFOG00015004512exosc109761.222Scleropages_formosus
ENSRNOG00000010719Exosc109762.500ENSSMAG00000017318exosc109762.785Scophthalmus_maximus
ENSRNOG00000010719Exosc109760.538ENSSDUG00000006646exosc109760.874Seriola_dumerili
ENSRNOG00000010719Exosc109760.494ENSSLDG00000025554exosc109760.943Seriola_lalandi_dorsalis
ENSRNOG00000010719Exosc108364.276ENSSARG00000013171EXOSC1010064.141Sorex_araneus
ENSRNOG00000010719Exosc109476.535ENSSPUG00000006844EXOSC109980.369Sphenodon_punctatus
ENSRNOG00000010719Exosc109961.290ENSSPAG00000007053exosc109961.883Stegastes_partitus
ENSRNOG00000010719Exosc109186.567ENSSSCG00000003412EXOSC1010086.070Sus_scrofa
ENSRNOG00000010719Exosc109669.006ENSTGUG00000002231EXOSC1010068.735Taeniopygia_guttata
ENSRNOG00000010719Exosc109858.379ENSTRUG00000012484exosc109857.563Takifugu_rubripes
ENSRNOG00000010719Exosc109860.068ENSTNIG00000015181exosc1010059.887Tetraodon_nigroviridis
ENSRNOG00000010719Exosc107295.489ENSTBEG00000017471-7295.489Tupaia_belangeri
ENSRNOG00000010719Exosc1010086.261ENSTTRG00000001320EXOSC1010086.036Tursiops_truncatus
ENSRNOG00000010719Exosc109687.339ENSUAMG00000014404EXOSC109886.987Ursus_americanus
ENSRNOG00000010719Exosc1010083.690ENSUMAG00000023413EXOSC109986.591Ursus_maritimus
ENSRNOG00000010719Exosc106295.421ENSVPAG00000004629EXOSC106295.421Vicugna_pacos
ENSRNOG00000010719Exosc109187.702ENSVVUG00000027116EXOSC1010087.329Vulpes_vulpes
ENSRNOG00000010719Exosc109759.794ENSXETG00000006318exosc1010059.794Xenopus_tropicalis
ENSRNOG00000010719Exosc109761.910ENSXCOG00000004665exosc109762.025Xiphophorus_couchianus
ENSRNOG00000010719Exosc109761.486ENSXMAG00000011246exosc109761.600Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000166nucleotide binding-IEAFunction
GO:00001753'-5'-exoribonuclease activity-IEAFunction
GO:00001753'-5'-exoribonuclease activity-ISOFunction
GO:0000176nuclear exosome (RNase complex)-IEAComponent
GO:0000176nuclear exosome (RNase complex)-ISOComponent
GO:0000178exosome (RNase complex)-ISOComponent
GO:0000460maturation of 5.8S rRNA-IEAProcess
GO:0000460maturation of 5.8S rRNA-ISOProcess
GO:0000956nuclear-transcribed mRNA catabolic process-ISOProcess
GO:0003676nucleic acid binding-IEAFunction
GO:0004532exoribonuclease activity-ISOFunction
GO:0005634nucleus-ISOComponent
GO:0005730nucleolus-IEAComponent
GO:0005730nucleolus-ISOComponent
GO:0005737cytoplasm-ISOComponent
GO:0005829cytosol-IEAComponent
GO:0005829cytosol-ISOComponent
GO:0009048dosage compensation by inactivation of X chromosome-IEAProcess
GO:0009048dosage compensation by inactivation of X chromosome-ISOProcess
GO:0032211negative regulation of telomere maintenance via telomerase-IEAProcess
GO:0032211negative regulation of telomere maintenance via telomerase-ISOProcess
GO:0035327transcriptionally active chromatin-IEAComponent
GO:0035327transcriptionally active chromatin-ISOComponent
GO:0071028nuclear mRNA surveillance-ISOProcess
GO:0071034CUT catabolic process-IEAProcess
GO:0071034CUT catabolic process-ISOProcess
GO:0071035nuclear polyadenylation-dependent rRNA catabolic process-IEAProcess
GO:0071035nuclear polyadenylation-dependent rRNA catabolic process-ISOProcess
GO:0071044histone mRNA catabolic process-IEAProcess
GO:0071044histone mRNA catabolic process-ISOProcess
GO:0071048nuclear retention of unspliced pre-mRNA at the site of transcription-IEAProcess
GO:0071048nuclear retention of unspliced pre-mRNA at the site of transcription-ISOProcess
GO:0090503RNA phosphodiester bond hydrolysis, exonucleolytic-IEAProcess
GO:1904872regulation of telomerase RNA localization to Cajal body-IEAProcess
GO:1904872regulation of telomerase RNA localization to Cajal body-ISOProcess

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