EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000010743 (Gene tree)
Gene ID: 315646
Gene Symbol: Fdxacb1
Alias: LOC315646|RGD1562252
Full Name: ferredoxin-fold anticodon binding domain containing 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 4442 bases
Position: chr8:55196758-55201199
Accession: 1562252
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000062770	FDX-ACB	PF03147.14	3.1e-16	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000065879	-	1754	XM_006243031	ENSRNOP00000062770	551 (aa)	XP_006243093	D3ZEA2

Gene Model

Click here to download ENSRNOG00000010743's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000010743's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000010743	Fdxacb1	97	70.796	ENSG00000255561	FDXACB1	90	70.796	Homo_sapiens
ENSRNOG00000010743	Fdxacb1	97	49.057	ENSAPOG00000009726	fdxacb1	88	49.057	Acanthochromis_polyacanthus
ENSRNOG00000010743	Fdxacb1	97	49.057	ENSAPOG00000009041	FDXACB1	88	49.057	Acanthochromis_polyacanthus
ENSRNOG00000010743	Fdxacb1	97	46.957	ENSACIG00000004208	fdxacb1	88	46.847	Amphilophus_citrinellus
ENSRNOG00000010743	Fdxacb1	97	49.057	ENSAOCG00000007455	fdxacb1	88	49.057	Amphiprion_ocellaris
ENSRNOG00000010743	Fdxacb1	97	49.057	ENSAPEG00000023857	fdxacb1	88	49.057	Amphiprion_percula
ENSRNOG00000010743	Fdxacb1	64	48.113	ENSATEG00000020757	fdxacb1	89	48.113	Anabas_testudineus
ENSRNOG00000010743	Fdxacb1	97	37.480	ENSAPLG00000004681	FDXACB1	99	37.480	Anas_platyrhynchos
ENSRNOG00000010743	Fdxacb1	97	70.796	ENSANAG00000022744	FDXACB1	90	70.796	Aotus_nancymaae
ENSRNOG00000010743	Fdxacb1	97	47.273	ENSACLG00000027415	-	89	47.273	Astatotilapia_calliptera
ENSRNOG00000010743	Fdxacb1	97	47.273	ENSACLG00000020497	fdxacb1	89	47.273	Astatotilapia_calliptera
ENSRNOG00000010743	Fdxacb1	94	30.328	ENSAMXG00000038372	fdxacb1	99	30.288	Astyanax_mexicanus
ENSRNOG00000010743	Fdxacb1	97	73.451	ENSBTAG00000004949	FDXACB1	88	78.571	Bos_taurus
ENSRNOG00000010743	Fdxacb1	97	70.796	ENSCJAG00000040413	FDXACB1	90	70.796	Callithrix_jacchus
ENSRNOG00000010743	Fdxacb1	97	72.566	ENSCAFG00020006314	FDXACB1	90	72.566	Canis_lupus_dingo
ENSRNOG00000010743	Fdxacb1	97	72.566	ENSCHIG00000017261	FDXACB1	90	72.566	Capra_hircus
ENSRNOG00000010743	Fdxacb1	97	70.796	ENSTSYG00000029218	FDXACB1	90	70.796	Carlito_syrichta
ENSRNOG00000010743	Fdxacb1	62	66.374	ENSCAPG00000010478	-	92	66.374	Cavia_aperea
ENSRNOG00000010743	Fdxacb1	97	74.336	ENSCPOG00000032584	FDXACB1	90	74.336	Cavia_porcellus
ENSRNOG00000010743	Fdxacb1	97	68.142	ENSCCAG00000024232	FDXACB1	90	68.142	Cebus_capucinus
ENSRNOG00000010743	Fdxacb1	97	70.796	ENSCATG00000035600	FDXACB1	90	70.796	Cercocebus_atys
ENSRNOG00000010743	Fdxacb1	97	57.556	ENSCLAG00000015613	FDXACB1	99	57.556	Chinchilla_lanigera
ENSRNOG00000010743	Fdxacb1	97	71.681	ENSCSAG00000002878	FDXACB1	90	71.681	Chlorocebus_sabaeus
ENSRNOG00000010743	Fdxacb1	97	56.688	ENSCHOG00000003037	FDXACB1	99	56.688	Choloepus_hoffmanni
ENSRNOG00000010743	Fdxacb1	97	56.364	ENSCPBG00000009087	FDXACB1	89	56.364	Chrysemys_picta_bellii
ENSRNOG00000010743	Fdxacb1	97	71.681	ENSCANG00000043844	FDXACB1	90	71.681	Colobus_angolensis_palliatus
ENSRNOG00000010743	Fdxacb1	100	64.623	ENSCGRG00001023825	Fdxacb1	100	64.623	Cricetulus_griseus_chok1gshd
ENSRNOG00000010743	Fdxacb1	100	64.623	ENSCGRG00000001752	Fdxacb1	100	64.623	Cricetulus_griseus_crigri
ENSRNOG00000010743	Fdxacb1	97	54.206	ENSCSEG00000006964	fdxacb1	88	54.206	Cynoglossus_semilaevis
ENSRNOG00000010743	Fdxacb1	97	49.550	ENSCVAG00000013005	fdxacb1	89	49.550	Cyprinodon_variegatus
ENSRNOG00000010743	Fdxacb1	97	53.333	ENSDARG00000095750	fdxacb1	87	53.333	Danio_rerio
ENSRNOG00000010743	Fdxacb1	97	72.566	ENSDNOG00000037748	FDXACB1	90	72.566	Dasypus_novemcinctus
ENSRNOG00000010743	Fdxacb1	97	68.142	ENSDORG00000028060	Fdxacb1	90	68.142	Dipodomys_ordii
ENSRNOG00000010743	Fdxacb1	98	72.973	ENSETEG00000004898	FDXACB1	89	72.973	Echinops_telfairi
ENSRNOG00000010743	Fdxacb1	97	74.336	ENSEASG00005007198	FDXACB1	90	74.336	Equus_asinus_asinus
ENSRNOG00000010743	Fdxacb1	97	74.336	ENSECAG00000009561	FDXACB1	90	74.336	Equus_caballus
ENSRNOG00000010743	Fdxacb1	91	68.182	ENSEEUG00000009839	FDXACB1	84	68.182	Erinaceus_europaeus
ENSRNOG00000010743	Fdxacb1	96	35.507	ENSELUG00000011250	fdxacb1	88	35.507	Esox_lucius
ENSRNOG00000010743	Fdxacb1	97	77.876	ENSFCAG00000024559	FDXACB1	90	77.876	Felis_catus
ENSRNOG00000010743	Fdxacb1	97	38.474	ENSFALG00000006177	FDXACB1	99	38.474	Ficedula_albicollis
ENSRNOG00000010743	Fdxacb1	97	56.822	ENSFDAG00000016115	FDXACB1	100	56.982	Fukomys_damarensis
ENSRNOG00000010743	Fdxacb1	96	51.402	ENSFHEG00000016602	fdxacb1	88	51.402	Fundulus_heteroclitus
ENSRNOG00000010743	Fdxacb1	97	37.520	ENSGALG00000007967	FDXACB1	100	37.520	Gallus_gallus
ENSRNOG00000010743	Fdxacb1	97	47.664	ENSGAFG00000001162	fdxacb1	84	47.664	Gambusia_affinis
ENSRNOG00000010743	Fdxacb1	97	50.909	ENSGACG00000020639	fdxacb1	89	50.909	Gasterosteus_aculeatus
ENSRNOG00000010743	Fdxacb1	87	66.071	ENSGAGG00000020645	FDXACB1	87	66.071	Gopherus_agassizii
ENSRNOG00000010743	Fdxacb1	97	72.566	ENSGGOG00000037643	FDXACB1	90	72.566	Gorilla_gorilla
ENSRNOG00000010743	Fdxacb1	97	47.273	ENSHBUG00000003489	fdxacb1	89	47.273	Haplochromis_burtoni
ENSRNOG00000010743	Fdxacb1	97	58.106	ENSHGLG00000004171	FDXACB1	100	58.106	Heterocephalus_glaber_female
ENSRNOG00000010743	Fdxacb1	97	58.106	ENSHGLG00100017458	FDXACB1	100	58.106	Heterocephalus_glaber_male
ENSRNOG00000010743	Fdxacb1	96	43.860	ENSHCOG00000018986	fdxacb1	88	43.860	Hippocampus_comes
ENSRNOG00000010743	Fdxacb1	96	50.000	ENSIPUG00000022559	FDXACB1	87	50.000	Ictalurus_punctatus
ENSRNOG00000010743	Fdxacb1	97	74.336	ENSJJAG00000010367	Fdxacb1	89	74.336	Jaculus_jaculus
ENSRNOG00000010743	Fdxacb1	97	48.571	ENSLBEG00000016100	fdxacb1	89	48.571	Labrus_bergylta
ENSRNOG00000010743	Fdxacb1	97	41.398	ENSLACG00000018780	FDXACB1	100	41.398	Latimeria_chalumnae
ENSRNOG00000010743	Fdxacb1	97	72.807	ENSLAFG00000014650	FDXACB1	90	72.807	Loxodonta_africana
ENSRNOG00000010743	Fdxacb1	97	70.796	ENSMFAG00000002448	FDXACB1	90	70.796	Macaca_fascicularis
ENSRNOG00000010743	Fdxacb1	97	70.796	ENSMNEG00000041539	FDXACB1	90	70.796	Macaca_nemestrina
ENSRNOG00000010743	Fdxacb1	97	48.113	ENSMAMG00000018674	fdxacb1	88	48.113	Mastacembelus_armatus
ENSRNOG00000010743	Fdxacb1	97	47.273	ENSMZEG00005018799	fdxacb1	89	47.273	Maylandia_zebra
ENSRNOG00000010743	Fdxacb1	97	66.399	ENSMAUG00000019310	Fdxacb1	90	77.368	Mesocricetus_auratus
ENSRNOG00000010743	Fdxacb1	97	72.566	ENSMICG00000045510	FDXACB1	90	72.566	Microcebus_murinus
ENSRNOG00000010743	Fdxacb1	97	77.876	ENSMOCG00000011835	Fdxacb1	90	77.876	Microtus_ochrogaster
ENSRNOG00000010743	Fdxacb1	96	51.456	ENSMMOG00000018749	fdxacb1	87	51.456	Mola_mola
ENSRNOG00000010743	Fdxacb1	97	87.611	MGP_CAROLIEiJ_G0032197	Fdxacb1	90	87.611	Mus_caroli
ENSRNOG00000010743	Fdxacb1	97	87.611	ENSMUSG00000037845	Fdxacb1	90	87.611	Mus_musculus
ENSRNOG00000010743	Fdxacb1	97	87.611	MGP_PahariEiJ_G0015065	Fdxacb1	90	87.611	Mus_pahari
ENSRNOG00000010743	Fdxacb1	97	86.726	MGP_SPRETEiJ_G0033336	Fdxacb1	90	86.726	Mus_spretus
ENSRNOG00000010743	Fdxacb1	97	75.221	ENSMPUG00000003585	FDXACB1	90	75.221	Mustela_putorius_furo
ENSRNOG00000010743	Fdxacb1	97	72.477	ENSMLUG00000014872	FDXACB1	89	72.477	Myotis_lucifugus
ENSRNOG00000010743	Fdxacb1	97	75.221	ENSNGAG00000014606	Fdxacb1	89	75.221	Nannospalax_galili
ENSRNOG00000010743	Fdxacb1	97	47.321	ENSNBRG00000006939	fdxacb1	87	47.222	Neolamprologus_brichardi
ENSRNOG00000010743	Fdxacb1	97	70.796	ENSNLEG00000030387	FDXACB1	90	70.796	Nomascus_leucogenys
ENSRNOG00000010743	Fdxacb1	97	68.142	ENSMEUG00000003077	FDXACB1	90	68.142	Notamacropus_eugenii
ENSRNOG00000010743	Fdxacb1	98	71.053	ENSOPRG00000012593	FDXACB1	89	71.053	Ochotona_princeps
ENSRNOG00000010743	Fdxacb1	97	53.514	ENSODEG00000010360	FDXACB1	90	65.092	Octodon_degus
ENSRNOG00000010743	Fdxacb1	97	49.107	ENSONIG00000004939	fdxacb1	89	49.107	Oreochromis_niloticus
ENSRNOG00000010743	Fdxacb1	97	64.035	ENSOANG00000003844	-	89	64.035	Ornithorhynchus_anatinus
ENSRNOG00000010743	Fdxacb1	97	39.161	ENSORLG00020008420	fdxacb1	89	39.161	Oryzias_latipes_hni
ENSRNOG00000010743	Fdxacb1	65	49.524	ENSOMEG00000019353	fdxacb1	54	49.524	Oryzias_melastigma
ENSRNOG00000010743	Fdxacb1	98	72.566	ENSOARG00000015064	FDXACB1	90	72.566	Ovis_aries
ENSRNOG00000010743	Fdxacb1	97	71.681	ENSPPAG00000030196	FDXACB1	91	71.681	Pan_paniscus
ENSRNOG00000010743	Fdxacb1	97	76.991	ENSPPRG00000005967	FDXACB1	90	76.991	Panthera_pardus
ENSRNOG00000010743	Fdxacb1	97	76.991	ENSPTIG00000016420	FDXACB1	90	76.991	Panthera_tigris_altaica
ENSRNOG00000010743	Fdxacb1	97	71.681	ENSPTRG00000004272	FDXACB1	91	71.681	Pan_troglodytes
ENSRNOG00000010743	Fdxacb1	97	69.912	ENSPANG00000019268	FDXACB1	90	69.912	Papio_anubis
ENSRNOG00000010743	Fdxacb1	94	31.545	ENSPKIG00000009407	fdxacb1	99	31.537	Paramormyrops_kingsleyae
ENSRNOG00000010743	Fdxacb1	65	47.273	ENSPMGG00000004912	fdxacb1	91	44.000	Periophthalmus_magnuspinnatus
ENSRNOG00000010743	Fdxacb1	97	76.991	ENSPEMG00000020188	Fdxacb1	90	76.393	Peromyscus_maniculatus_bairdii
ENSRNOG00000010743	Fdxacb1	97	48.598	ENSPFOG00000022156	fdxacb1	88	48.598	Poecilia_formosa
ENSRNOG00000010743	Fdxacb1	97	48.598	ENSPLAG00000019966	fdxacb1	88	48.598	Poecilia_latipinna
ENSRNOG00000010743	Fdxacb1	97	48.598	ENSPMEG00000002110	fdxacb1	88	48.598	Poecilia_mexicana
ENSRNOG00000010743	Fdxacb1	97	47.664	ENSPREG00000017453	fdxacb1	88	47.664	Poecilia_reticulata
ENSRNOG00000010743	Fdxacb1	98	71.930	ENSPPYG00000003866	FDXACB1	90	71.930	Pongo_abelii
ENSRNOG00000010743	Fdxacb1	97	75.000	ENSPCAG00000000333	FDXACB1	89	75.000	Procavia_capensis
ENSRNOG00000010743	Fdxacb1	97	72.566	ENSPCOG00000027443	FDXACB1	90	72.566	Propithecus_coquereli
ENSRNOG00000010743	Fdxacb1	98	69.298	ENSPVAG00000009610	FDXACB1	90	69.298	Pteropus_vampyrus
ENSRNOG00000010743	Fdxacb1	97	47.273	ENSPNYG00000012981	fdxacb1	89	47.273	Pundamilia_nyererei
ENSRNOG00000010743	Fdxacb1	95	31.209	ENSPNAG00000003284	fdxacb1	99	31.150	Pygocentrus_nattereri
ENSRNOG00000010743	Fdxacb1	97	71.681	ENSRBIG00000014195	FDXACB1	90	71.681	Rhinopithecus_bieti
ENSRNOG00000010743	Fdxacb1	97	70.796	ENSRROG00000045453	FDXACB1	90	70.796	Rhinopithecus_roxellana
ENSRNOG00000010743	Fdxacb1	97	71.681	ENSSBOG00000027732	FDXACB1	90	71.681	Saimiri_boliviensis_boliviensis
ENSRNOG00000010743	Fdxacb1	97	54.717	ENSSFOG00015009862	fdxacb1	87	54.717	Scleropages_formosus
ENSRNOG00000010743	Fdxacb1	97	49.533	ENSSMAG00000010250	fdxacb1	88	49.533	Scophthalmus_maximus
ENSRNOG00000010743	Fdxacb1	96	50.000	ENSSDUG00000004461	fdxacb1	87	50.000	Seriola_dumerili
ENSRNOG00000010743	Fdxacb1	96	49.057	ENSSLDG00000017388	fdxacb1	87	49.057	Seriola_lalandi_dorsalis
ENSRNOG00000010743	Fdxacb1	97	71.681	ENSSARG00000002541	FDXACB1	89	71.681	Sorex_araneus
ENSRNOG00000010743	Fdxacb1	96	56.604	ENSSPUG00000010598	FDXACB1	87	56.604	Sphenodon_punctatus
ENSRNOG00000010743	Fdxacb1	97	50.000	ENSSPAG00000007903	fdxacb1	52	50.000	Stegastes_partitus
ENSRNOG00000010743	Fdxacb1	97	74.336	ENSSSCG00000021871	FDXACB1	90	74.336	Sus_scrofa
ENSRNOG00000010743	Fdxacb1	97	38.969	ENSTGUG00000000326	FDXACB1	99	38.969	Taeniopygia_guttata
ENSRNOG00000010743	Fdxacb1	97	47.222	ENSTRUG00000017134	fdxacb1	88	47.222	Takifugu_rubripes
ENSRNOG00000010743	Fdxacb1	96	48.571	ENSTNIG00000009977	fdxacb1	87	48.571	Tetraodon_nigroviridis
ENSRNOG00000010743	Fdxacb1	98	74.561	ENSTBEG00000010204	FDXACB1	90	74.561	Tupaia_belangeri
ENSRNOG00000010743	Fdxacb1	98	75.439	ENSTTRG00000010496	FDXACB1	90	75.439	Tursiops_truncatus
ENSRNOG00000010743	Fdxacb1	97	74.336	ENSUAMG00000018595	FDXACB1	90	74.336	Ursus_americanus
ENSRNOG00000010743	Fdxacb1	97	74.336	ENSUMAG00000006940	FDXACB1	90	74.336	Ursus_maritimus
ENSRNOG00000010743	Fdxacb1	86	74.766	ENSVPAG00000000044	FDXACB1	89	74.766	Vicugna_pacos
ENSRNOG00000010743	Fdxacb1	97	72.566	ENSVVUG00000015845	FDXACB1	90	72.566	Vulpes_vulpes
ENSRNOG00000010743	Fdxacb1	97	49.038	ENSXETG00000010172	fdxacb1	88	49.038	Xenopus_tropicalis
ENSRNOG00000010743	Fdxacb1	97	47.664	ENSXCOG00000007930	fdxacb1	87	47.664	Xiphophorus_couchianus
ENSRNOG00000010743	Fdxacb1	97	48.598	ENSXMAG00000010929	fdxacb1	88	48.598	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0070042	rRNA (uridine-N3-)-methyltransferase activity	21873635.	IBA	Function
GO:0070475	rRNA base methylation	21873635.	IBA	Process