EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000010750 (Gene tree)
Gene ID: 362728
Gene Symbol: Twistnb
Alias: LOC362728
Full Name: TWIST neighbor
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 17469 bases
Position: chr6:52751106-52768574
Accession: 1307824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000014373	SHS2_Rpb7-N	PF03876.17	2.1e-09	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000014373	-	3557	-	ENSRNOP00000014373	321 (aa)	-	D4ADH7

Gene Model

Click here to download ENSRNOG00000010750's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000010750's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000010750	Twistnb	99	76.398	ENSG00000105849	TWISTNB	94	76.087	Homo_sapiens
ENSRNOG00000010750	Twistnb	99	68.108	ENSAMEG00000008558	TWISTNB	70	88.614	Ailuropoda_melanoleuca
ENSRNOG00000010750	Twistnb	93	45.312	ENSACIG00000020400	twistnb	50	56.915	Amphilophus_citrinellus
ENSRNOG00000010750	Twistnb	53	64.497	ENSACAG00000011817	TWISTNB	86	64.497	Anolis_carolinensis
ENSRNOG00000010750	Twistnb	99	75.776	ENSANAG00000026418	TWISTNB	95	75.776	Aotus_nancymaae
ENSRNOG00000010750	Twistnb	88	44.326	ENSAMXG00000035868	twistnb	55	58.011	Astyanax_mexicanus
ENSRNOG00000010750	Twistnb	96	76.547	ENSBTAG00000006721	TWISTNB	95	75.938	Bos_taurus
ENSRNOG00000010750	Twistnb	99	76.471	ENSCJAG00000001148	TWISTNB	95	76.471	Callithrix_jacchus
ENSRNOG00000010750	Twistnb	99	72.205	ENSCAFG00000002511	TWISTNB	94	74.622	Canis_familiaris
ENSRNOG00000010750	Twistnb	99	73.394	ENSCAFG00020002140	TWISTNB	88	75.841	Canis_lupus_dingo
ENSRNOG00000010750	Twistnb	96	75.806	ENSCHIG00000024078	TWISTNB	92	76.129	Capra_hircus
ENSRNOG00000010750	Twistnb	99	76.471	ENSTSYG00000001471	TWISTNB	94	76.471	Carlito_syrichta
ENSRNOG00000010750	Twistnb	99	78.882	ENSCPOG00000031651	TWISTNB	95	78.882	Cavia_porcellus
ENSRNOG00000010750	Twistnb	99	76.324	ENSCCAG00000026416	TWISTNB	94	76.324	Cebus_capucinus
ENSRNOG00000010750	Twistnb	99	75.466	ENSCATG00000035621	TWISTNB	94	75.155	Cercocebus_atys
ENSRNOG00000010750	Twistnb	99	78.261	ENSCLAG00000012696	TWISTNB	95	78.261	Chinchilla_lanigera
ENSRNOG00000010750	Twistnb	99	75.776	ENSCSAG00000013544	TWISTNB	94	75.466	Chlorocebus_sabaeus
ENSRNOG00000010750	Twistnb	78	86.364	ENSCHOG00000006034	TWISTNB	74	86.364	Choloepus_hoffmanni
ENSRNOG00000010750	Twistnb	91	62.500	ENSCPBG00000000367	TWISTNB	85	63.830	Chrysemys_picta_bellii
ENSRNOG00000010750	Twistnb	99	75.776	ENSCANG00000038759	TWISTNB	94	75.466	Colobus_angolensis_palliatus
ENSRNOG00000010750	Twistnb	99	84.013	ENSCGRG00001000499	Twistnb	97	84.013	Cricetulus_griseus_chok1gshd
ENSRNOG00000010750	Twistnb	98	75.710	ENSDNOG00000006438	-	95	75.625	Dasypus_novemcinctus
ENSRNOG00000010750	Twistnb	96	75.325	ENSDORG00000007795	Twistnb	99	75.312	Dipodomys_ordii
ENSRNOG00000010750	Twistnb	99	79.439	ENSEASG00005021702	TWISTNB	91	79.128	Equus_asinus_asinus
ENSRNOG00000010750	Twistnb	99	79.439	ENSECAG00000014563	TWISTNB	91	79.128	Equus_caballus
ENSRNOG00000010750	Twistnb	93	45.631	ENSELUG00000000098	TWISTNB	82	47.333	Esox_lucius
ENSRNOG00000010750	Twistnb	99	78.750	ENSFCAG00000025987	TWISTNB	95	78.438	Felis_catus
ENSRNOG00000010750	Twistnb	81	51.986	ENSFALG00000009761	TWISTNB	89	52.347	Ficedula_albicollis
ENSRNOG00000010750	Twistnb	99	78.261	ENSFDAG00000017368	TWISTNB	95	78.505	Fukomys_damarensis
ENSRNOG00000010750	Twistnb	88	57.801	ENSGALG00000010863	TWISTNB	69	58.007	Gallus_gallus
ENSRNOG00000010750	Twistnb	64	52.582	ENSGACG00000006425	twistnb	66	56.897	Gasterosteus_aculeatus
ENSRNOG00000010750	Twistnb	99	76.398	ENSGGOG00000026888	TWISTNB	94	76.087	Gorilla_gorilla
ENSRNOG00000010750	Twistnb	99	77.950	ENSHGLG00000010976	TWISTNB	95	77.640	Heterocephalus_glaber_female
ENSRNOG00000010750	Twistnb	99	77.950	ENSHGLG00100005410	TWISTNB	95	77.640	Heterocephalus_glaber_male
ENSRNOG00000010750	Twistnb	90	41.100	ENSHCOG00000010590	twistnb	76	42.222	Hippocampus_comes
ENSRNOG00000010750	Twistnb	71	46.930	ENSIPUG00000004117	twistnb	51	54.054	Ictalurus_punctatus
ENSRNOG00000010750	Twistnb	99	80.997	ENSSTOG00000022702	TWISTNB	88	80.997	Ictidomys_tridecemlineatus
ENSRNOG00000010750	Twistnb	99	75.000	ENSJJAG00000015887	Twistnb	95	73.750	Jaculus_jaculus
ENSRNOG00000010750	Twistnb	54	59.770	ENSKMAG00000001591	twistnb	52	57.436	Kryptolebias_marmoratus
ENSRNOG00000010750	Twistnb	92	55.034	ENSLACG00000010508	TWISTNB	54	68.783	Latimeria_chalumnae
ENSRNOG00000010750	Twistnb	59	62.963	ENSLOCG00000011399	twistnb	60	61.809	Lepisosteus_oculatus
ENSRNOG00000010750	Twistnb	99	77.329	ENSLAFG00000008755	TWISTNB	96	77.019	Loxodonta_africana
ENSRNOG00000010750	Twistnb	99	75.776	ENSMFAG00000045328	TWISTNB	94	75.466	Macaca_fascicularis
ENSRNOG00000010750	Twistnb	99	75.776	ENSMMUG00000009609	TWISTNB	94	75.466	Macaca_mulatta
ENSRNOG00000010750	Twistnb	99	75.155	ENSMNEG00000041159	TWISTNB	94	74.845	Macaca_nemestrina
ENSRNOG00000010750	Twistnb	99	75.776	ENSMLEG00000042783	TWISTNB	94	75.466	Mandrillus_leucophaeus
ENSRNOG00000010750	Twistnb	99	78.019	ENSMICG00000036489	TWISTNB	97	78.019	Microcebus_murinus
ENSRNOG00000010750	Twistnb	100	84.112	ENSMOCG00000003458	Twistnb	98	84.639	Microtus_ochrogaster
ENSRNOG00000010750	Twistnb	65	51.196	ENSMMOG00000020085	twistnb	51	53.500	Mola_mola
ENSRNOG00000010750	Twistnb	87	57.093	ENSMODG00000001402	-	64	57.860	Monodelphis_domestica
ENSRNOG00000010750	Twistnb	100	90.093	MGP_CAROLIEiJ_G0017692	Twistnb	98	90.402	Mus_caroli
ENSRNOG00000010750	Twistnb	100	87.888	ENSMUSG00000020561	Twistnb	98	90.373	Mus_musculus
ENSRNOG00000010750	Twistnb	100	91.615	MGP_PahariEiJ_G0029450	Twistnb	98	91.304	Mus_pahari
ENSRNOG00000010750	Twistnb	100	90.683	MGP_SPRETEiJ_G0018534	Twistnb	98	90.994	Mus_spretus
ENSRNOG00000010750	Twistnb	99	77.812	ENSMPUG00000013948	TWISTNB	89	77.812	Mustela_putorius_furo
ENSRNOG00000010750	Twistnb	92	71.380	ENSMLUG00000008848	TWISTNB	95	72.727	Myotis_lucifugus
ENSRNOG00000010750	Twistnb	62	90.000	ENSNGAG00000022455	Twistnb	99	90.000	Nannospalax_galili
ENSRNOG00000010750	Twistnb	60	55.959	ENSNBRG00000008652	twistnb	52	55.959	Neolamprologus_brichardi
ENSRNOG00000010750	Twistnb	94	77.303	ENSNLEG00000035755	TWISTNB	89	76.974	Nomascus_leucogenys
ENSRNOG00000010750	Twistnb	99	72.615	ENSOPRG00000016109	TWISTNB	94	72.615	Ochotona_princeps
ENSRNOG00000010750	Twistnb	99	76.398	ENSODEG00000007222	TWISTNB	95	76.708	Octodon_degus
ENSRNOG00000010750	Twistnb	99	76.471	ENSOGAG00000009189	TWISTNB	95	76.471	Otolemur_garnettii
ENSRNOG00000010750	Twistnb	96	76.052	ENSOARG00000009803	TWISTNB	90	76.052	Ovis_aries
ENSRNOG00000010750	Twistnb	99	76.087	ENSPPAG00000034623	TWISTNB	94	76.087	Pan_paniscus
ENSRNOG00000010750	Twistnb	99	78.438	ENSPPRG00000005877	TWISTNB	95	77.500	Panthera_pardus
ENSRNOG00000010750	Twistnb	88	79.225	ENSPTIG00000021539	TWISTNB	94	79.787	Panthera_tigris_altaica
ENSRNOG00000010750	Twistnb	99	76.708	ENSPTRG00000018962	TWISTNB	94	76.398	Pan_troglodytes
ENSRNOG00000010750	Twistnb	99	75.466	ENSPANG00000015736	TWISTNB	94	75.155	Papio_anubis
ENSRNOG00000010750	Twistnb	69	56.522	ENSPKIG00000025635	twistnb	55	59.500	Paramormyrops_kingsleyae
ENSRNOG00000010750	Twistnb	87	56.446	ENSPCIG00000017456	TWISTNB	84	56.294	Phascolarctos_cinereus
ENSRNOG00000010750	Twistnb	99	75.776	ENSPPYG00000017752	TWISTNB	94	75.776	Pongo_abelii
ENSRNOG00000010750	Twistnb	99	74.613	ENSPCOG00000017601	TWISTNB	96	76.161	Propithecus_coquereli
ENSRNOG00000010750	Twistnb	99	72.446	ENSPVAG00000015574	TWISTNB	94	73.684	Pteropus_vampyrus
ENSRNOG00000010750	Twistnb	60	57.216	ENSPNYG00000002674	twistnb	51	57.216	Pundamilia_nyererei
ENSRNOG00000010750	Twistnb	94	44.828	ENSPNAG00000011956	twistnb	52	55.851	Pygocentrus_nattereri
ENSRNOG00000010750	Twistnb	99	75.776	ENSRBIG00000043007	TWISTNB	93	75.466	Rhinopithecus_bieti
ENSRNOG00000010750	Twistnb	99	75.776	ENSRROG00000040155	TWISTNB	94	75.466	Rhinopithecus_roxellana
ENSRNOG00000010750	Twistnb	99	74.845	ENSSBOG00000023188	TWISTNB	95	75.466	Saimiri_boliviensis_boliviensis
ENSRNOG00000010750	Twistnb	55	58.659	ENSSFOG00015012788	twistnb	52	61.212	Scleropages_formosus
ENSRNOG00000010750	Twistnb	93	49.367	ENSSPUG00000007595	TWISTNB	92	51.195	Sphenodon_punctatus
ENSRNOG00000010750	Twistnb	99	76.250	ENSSSCG00000025298	TWISTNB	96	76.250	Sus_scrofa
ENSRNOG00000010750	Twistnb	89	46.179	ENSTNIG00000017778	twistnb	53	58.046	Tetraodon_nigroviridis
ENSRNOG00000010750	Twistnb	99	77.570	ENSTBEG00000003554	TWISTNB	94	76.947	Tupaia_belangeri
ENSRNOG00000010750	Twistnb	99	78.125	ENSUAMG00000017593	TWISTNB	95	78.125	Ursus_americanus
ENSRNOG00000010750	Twistnb	99	77.812	ENSUMAG00000022203	TWISTNB	95	77.812	Ursus_maritimus
ENSRNOG00000010750	Twistnb	99	74.006	ENSVVUG00000008386	TWISTNB	95	76.147	Vulpes_vulpes
ENSRNOG00000010750	Twistnb	73	54.237	ENSXCOG00000020199	twistnb	51	60.106	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001054	RNA polymerase I activity	21873635.	IBA	Function
GO:0003674	molecular_function	-	ND	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	21873635.	IBA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005736	RNA polymerase I complex	21873635.	IBA	Component
GO:0006360	transcription by RNA polymerase I	-	IEA	Process
GO:0008150	biological_process	-	ND	Process
GO:1990830	cellular response to leukemia inhibitory factor	-	IEA	Process
GO:1990830	cellular response to leukemia inhibitory factor	-	ISO	Process