EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000010795 (Gene tree)
Gene ID: 312227
Gene Symbol: Cnot4
Alias: LOC312227|MGC114505
Full Name: CCR4-NOT transcription complex%2C subunit 4
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 101757 bases
Position: chr4:62561444-62663200
Accession: 1310318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000046140	RRM_1	PF00076.22	1.2e-05	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000040969	-	3473	XM_006236271	ENSRNOP00000046140	710 (aa)	XP_006236333	Q498M7

Gene Model

Click here to download ENSRNOG00000010795's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000010795's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000010795	Cnot4	100	97.887	ENSG00000080802	CNOT4	100	97.887	Homo_sapiens
ENSRNOG00000010795	Cnot4	93	90.566	ENSAPOG00000016272	cnot4a	82	90.566	Acanthochromis_polyacanthus
ENSRNOG00000010795	Cnot4	97	96.812	ENSAMEG00000012081	CNOT4	91	99.535	Ailuropoda_melanoleuca
ENSRNOG00000010795	Cnot4	100	59.727	ENSACIG00000003011	cnot4a	100	59.356	Amphilophus_citrinellus
ENSRNOG00000010795	Cnot4	99	90.566	ENSAOCG00000010792	cnot4a	91	90.566	Amphiprion_ocellaris
ENSRNOG00000010795	Cnot4	99	90.566	ENSAPEG00000004680	cnot4a	91	90.566	Amphiprion_percula
ENSRNOG00000010795	Cnot4	99	90.189	ENSATEG00000017580	cnot4a	91	90.189	Anabas_testudineus
ENSRNOG00000010795	Cnot4	100	87.664	ENSAPLG00000016441	CNOT4	100	87.664	Anas_platyrhynchos
ENSRNOG00000010795	Cnot4	100	87.664	ENSACAG00000011154	CNOT4	100	87.664	Anolis_carolinensis
ENSRNOG00000010795	Cnot4	100	97.887	ENSANAG00000032156	CNOT4	100	97.887	Aotus_nancymaae
ENSRNOG00000010795	Cnot4	99	90.566	ENSACLG00000002514	cnot4a	91	90.566	Astatotilapia_calliptera
ENSRNOG00000010795	Cnot4	100	71.875	ENSAMXG00000001373	cnot4a	100	71.282	Astyanax_mexicanus
ENSRNOG00000010795	Cnot4	100	92.620	ENSAMXG00000011473	cnot4b	100	64.626	Astyanax_mexicanus
ENSRNOG00000010795	Cnot4	100	96.914	ENSBTAG00000017919	CNOT4	100	96.914	Bos_taurus
ENSRNOG00000010795	Cnot4	100	97.887	ENSCJAG00000012532	CNOT4	100	97.887	Callithrix_jacchus
ENSRNOG00000010795	Cnot4	100	97.887	ENSCAFG00000003223	CNOT4	100	97.887	Canis_familiaris
ENSRNOG00000010795	Cnot4	100	87.324	ENSCAFG00020000093	CNOT4	94	99.072	Canis_lupus_dingo
ENSRNOG00000010795	Cnot4	100	96.774	ENSCHIG00000010955	CNOT4	100	96.774	Capra_hircus
ENSRNOG00000010795	Cnot4	100	97.465	ENSTSYG00000000893	CNOT4	100	97.465	Carlito_syrichta
ENSRNOG00000010795	Cnot4	100	94.789	ENSCAPG00000006213	CNOT4	100	94.789	Cavia_aperea
ENSRNOG00000010795	Cnot4	100	97.183	ENSCPOG00000011526	CNOT4	100	97.183	Cavia_porcellus
ENSRNOG00000010795	Cnot4	100	97.335	ENSCCAG00000024414	CNOT4	100	97.335	Cebus_capucinus
ENSRNOG00000010795	Cnot4	100	97.335	ENSCATG00000022607	CNOT4	100	97.335	Cercocebus_atys
ENSRNOG00000010795	Cnot4	100	97.324	ENSCLAG00000001857	CNOT4	100	97.324	Chinchilla_lanigera
ENSRNOG00000010795	Cnot4	100	97.887	ENSCSAG00000009096	CNOT4	100	97.887	Chlorocebus_sabaeus
ENSRNOG00000010795	Cnot4	68	99.465	ENSCHOG00000010412	CNOT4	63	99.465	Choloepus_hoffmanni
ENSRNOG00000010795	Cnot4	100	94.250	ENSCPBG00000004959	CNOT4	100	94.250	Chrysemys_picta_bellii
ENSRNOG00000010795	Cnot4	66	69.323	ENSCING00000004364	-	93	41.467	Ciona_intestinalis
ENSRNOG00000010795	Cnot4	100	97.195	ENSCANG00000029319	CNOT4	100	97.195	Colobus_angolensis_palliatus
ENSRNOG00000010795	Cnot4	100	98.732	ENSCGRG00001014651	Cnot4	100	98.732	Cricetulus_griseus_chok1gshd
ENSRNOG00000010795	Cnot4	100	98.732	ENSCGRG00000005727	Cnot4	100	98.732	Cricetulus_griseus_crigri
ENSRNOG00000010795	Cnot4	94	90.566	ENSCSEG00000015080	cnot4a	84	90.566	Cynoglossus_semilaevis
ENSRNOG00000010795	Cnot4	99	90.566	ENSCVAG00000009399	cnot4a	91	90.566	Cyprinodon_variegatus
ENSRNOG00000010795	Cnot4	100	70.789	ENSDARG00000007045	cnot4a	100	70.284	Danio_rerio
ENSRNOG00000010795	Cnot4	100	66.380	ENSDARG00000007639	cnot4b	100	65.802	Danio_rerio
ENSRNOG00000010795	Cnot4	100	96.353	ENSDNOG00000009409	CNOT4	100	96.353	Dasypus_novemcinctus
ENSRNOG00000010795	Cnot4	100	97.042	ENSDORG00000012268	Cnot4	100	97.042	Dipodomys_ordii
ENSRNOG00000010795	Cnot4	100	91.445	ENSETEG00000013407	CNOT4	89	93.899	Echinops_telfairi
ENSRNOG00000010795	Cnot4	100	92.523	ENSEASG00005014430	CNOT4	100	92.523	Equus_asinus_asinus
ENSRNOG00000010795	Cnot4	100	97.055	ENSECAG00000020262	CNOT4	100	97.055	Equus_caballus
ENSRNOG00000010795	Cnot4	99	90.637	ENSELUG00000008742	cnot4a	90	90.637	Esox_lucius
ENSRNOG00000010795	Cnot4	100	73.887	ENSELUG00000011540	cnot4b	98	71.625	Esox_lucius
ENSRNOG00000010795	Cnot4	100	97.746	ENSFCAG00000011904	CNOT4	100	97.746	Felis_catus
ENSRNOG00000010795	Cnot4	100	87.795	ENSFALG00000011194	CNOT4	100	87.795	Ficedula_albicollis
ENSRNOG00000010795	Cnot4	100	98.169	ENSFDAG00000013525	CNOT4	100	98.169	Fukomys_damarensis
ENSRNOG00000010795	Cnot4	100	89.259	ENSFHEG00000006608	cnot4a	100	63.401	Fundulus_heteroclitus
ENSRNOG00000010795	Cnot4	95	59.016	ENSGMOG00000001329	cnot4a	97	59.588	Gadus_morhua
ENSRNOG00000010795	Cnot4	100	93.689	ENSGALG00000011682	CNOT4	100	93.689	Gallus_gallus
ENSRNOG00000010795	Cnot4	99	90.189	ENSGACG00000004276	cnot4a	91	90.189	Gasterosteus_aculeatus
ENSRNOG00000010795	Cnot4	100	93.689	ENSGAGG00000017331	CNOT4	100	93.689	Gopherus_agassizii
ENSRNOG00000010795	Cnot4	92	97.409	ENSGGOG00000000142	CNOT4	99	97.409	Gorilla_gorilla
ENSRNOG00000010795	Cnot4	99	90.566	ENSHBUG00000000027	cnot4a	91	90.566	Haplochromis_burtoni
ENSRNOG00000010795	Cnot4	100	98.169	ENSHGLG00000011533	CNOT4	100	98.169	Heterocephalus_glaber_female
ENSRNOG00000010795	Cnot4	76	98.155	ENSHGLG00100013058	CNOT4	94	98.155	Heterocephalus_glaber_male
ENSRNOG00000010795	Cnot4	98	89.434	ENSHCOG00000015815	cnot4a	91	89.434	Hippocampus_comes
ENSRNOG00000010795	Cnot4	100	91.481	ENSIPUG00000006393	cnot4	91	91.481	Ictalurus_punctatus
ENSRNOG00000010795	Cnot4	100	64.399	ENSIPUG00000016994	cnot4b	100	64.118	Ictalurus_punctatus
ENSRNOG00000010795	Cnot4	100	97.887	ENSSTOG00000007717	CNOT4	100	97.887	Ictidomys_tridecemlineatus
ENSRNOG00000010795	Cnot4	76	81.413	ENSJJAG00000019991	-	93	81.413	Jaculus_jaculus
ENSRNOG00000010795	Cnot4	100	97.606	ENSJJAG00000016618	Cnot4	100	97.606	Jaculus_jaculus
ENSRNOG00000010795	Cnot4	94	90.566	ENSKMAG00000004581	cnot4a	79	90.566	Kryptolebias_marmoratus
ENSRNOG00000010795	Cnot4	99	90.943	ENSLBEG00000009999	cnot4a	91	90.943	Labrus_bergylta
ENSRNOG00000010795	Cnot4	100	82.092	ENSLACG00000002647	CNOT4	99	82.092	Latimeria_chalumnae
ENSRNOG00000010795	Cnot4	100	93.382	ENSLOCG00000016126	cnot4a	92	93.382	Lepisosteus_oculatus
ENSRNOG00000010795	Cnot4	100	96.353	ENSLAFG00000000709	CNOT4	100	96.353	Loxodonta_africana
ENSRNOG00000010795	Cnot4	100	97.887	ENSMFAG00000046349	CNOT4	100	97.887	Macaca_fascicularis
ENSRNOG00000010795	Cnot4	100	97.335	ENSMMUG00000016181	CNOT4	100	97.335	Macaca_mulatta
ENSRNOG00000010795	Cnot4	100	97.335	ENSMNEG00000042164	CNOT4	100	97.335	Macaca_nemestrina
ENSRNOG00000010795	Cnot4	100	97.335	ENSMLEG00000032709	CNOT4	100	97.335	Mandrillus_leucophaeus
ENSRNOG00000010795	Cnot4	99	90.566	ENSMAMG00000023194	cnot4a	91	90.566	Mastacembelus_armatus
ENSRNOG00000010795	Cnot4	99	90.566	ENSMZEG00005007312	cnot4a	91	90.566	Maylandia_zebra
ENSRNOG00000010795	Cnot4	100	87.533	ENSMGAG00000011788	CNOT4	100	87.533	Meleagris_gallopavo
ENSRNOG00000010795	Cnot4	100	97.606	ENSMAUG00000020415	Cnot4	100	97.606	Mesocricetus_auratus
ENSRNOG00000010795	Cnot4	100	97.616	ENSMICG00000001667	CNOT4	100	98.122	Microcebus_murinus
ENSRNOG00000010795	Cnot4	100	98.451	ENSMOCG00000020955	Cnot4	100	98.451	Microtus_ochrogaster
ENSRNOG00000010795	Cnot4	79	73.438	ENSMMOG00000014565	cnot4a	93	73.438	Mola_mola
ENSRNOG00000010795	Cnot4	100	95.915	ENSMODG00000014068	CNOT4	100	95.915	Monodelphis_domestica
ENSRNOG00000010795	Cnot4	93	90.566	ENSMALG00000011662	cnot4a	80	90.566	Monopterus_albus
ENSRNOG00000010795	Cnot4	100	98.876	MGP_CAROLIEiJ_G0028217	Cnot4	100	98.876	Mus_caroli
ENSRNOG00000010795	Cnot4	100	99.014	ENSMUSG00000038784	Cnot4	100	99.014	Mus_musculus
ENSRNOG00000010795	Cnot4	100	99.014	MGP_PahariEiJ_G0021974	Cnot4	100	99.014	Mus_pahari
ENSRNOG00000010795	Cnot4	100	98.873	MGP_SPRETEiJ_G0029216	Cnot4	100	98.873	Mus_spretus
ENSRNOG00000010795	Cnot4	100	97.887	ENSMPUG00000004089	CNOT4	100	97.887	Mustela_putorius_furo
ENSRNOG00000010795	Cnot4	100	86.816	ENSMLUG00000008260	CNOT4	100	86.255	Myotis_lucifugus
ENSRNOG00000010795	Cnot4	100	97.324	ENSNGAG00000015030	Cnot4	100	97.324	Nannospalax_galili
ENSRNOG00000010795	Cnot4	100	63.438	ENSNBRG00000021144	cnot4a	100	61.737	Neolamprologus_brichardi
ENSRNOG00000010795	Cnot4	100	97.055	ENSNLEG00000013352	CNOT4	100	97.055	Nomascus_leucogenys
ENSRNOG00000010795	Cnot4	86	95.778	ENSOPRG00000001023	CNOT4	80	95.778	Ochotona_princeps
ENSRNOG00000010795	Cnot4	100	97.183	ENSODEG00000012975	CNOT4	100	97.183	Octodon_degus
ENSRNOG00000010795	Cnot4	99	90.566	ENSONIG00000008656	cnot4a	91	90.566	Oreochromis_niloticus
ENSRNOG00000010795	Cnot4	100	94.242	ENSOANG00000005006	CNOT4	100	94.242	Ornithorhynchus_anatinus
ENSRNOG00000010795	Cnot4	100	97.746	ENSOCUG00000013448	CNOT4	100	97.746	Oryctolagus_cuniculus
ENSRNOG00000010795	Cnot4	100	64.454	ENSORLG00000003727	cnot4a	91	90.943	Oryzias_latipes
ENSRNOG00000010795	Cnot4	100	64.159	ENSORLG00020015684	cnot4a	91	91.321	Oryzias_latipes_hni
ENSRNOG00000010795	Cnot4	100	64.592	ENSORLG00015008470	cnot4a	91	91.321	Oryzias_latipes_hsok
ENSRNOG00000010795	Cnot4	100	63.624	ENSOMEG00000011084	cnot4a	91	90.943	Oryzias_melastigma
ENSRNOG00000010795	Cnot4	100	97.475	ENSOGAG00000015499	CNOT4	100	97.475	Otolemur_garnettii
ENSRNOG00000010795	Cnot4	100	96.914	ENSOARG00000008803	CNOT4	100	96.914	Ovis_aries
ENSRNOG00000010795	Cnot4	100	97.335	ENSPPAG00000041937	CNOT4	100	97.335	Pan_paniscus
ENSRNOG00000010795	Cnot4	100	97.195	ENSPPRG00000023940	CNOT4	100	97.195	Panthera_pardus
ENSRNOG00000010795	Cnot4	100	97.606	ENSPTIG00000016601	CNOT4	100	97.606	Panthera_tigris_altaica
ENSRNOG00000010795	Cnot4	100	97.195	ENSPTRG00000019727	CNOT4	100	97.195	Pan_troglodytes
ENSRNOG00000010795	Cnot4	100	97.195	ENSPANG00000017724	CNOT4	100	97.195	Papio_anubis
ENSRNOG00000010795	Cnot4	98	68.552	ENSPKIG00000018137	cnot4a	100	68.220	Paramormyrops_kingsleyae
ENSRNOG00000010795	Cnot4	100	85.976	ENSPSIG00000011256	CNOT4	100	85.976	Pelodiscus_sinensis
ENSRNOG00000010795	Cnot4	100	65.164	ENSPMGG00000005671	cnot4a	100	64.481	Periophthalmus_magnuspinnatus
ENSRNOG00000010795	Cnot4	100	98.592	ENSPEMG00000021566	Cnot4	100	98.592	Peromyscus_maniculatus_bairdii
ENSRNOG00000010795	Cnot4	100	95.493	ENSPCIG00000029622	CNOT4	96	95.493	Phascolarctos_cinereus
ENSRNOG00000010795	Cnot4	99	90.566	ENSPFOG00000002228	cnot4a	91	90.566	Poecilia_formosa
ENSRNOG00000010795	Cnot4	100	65.247	ENSPLAG00000001780	cnot4a	100	63.874	Poecilia_latipinna
ENSRNOG00000010795	Cnot4	99	90.566	ENSPMEG00000006852	cnot4a	91	90.566	Poecilia_mexicana
ENSRNOG00000010795	Cnot4	100	70.013	ENSPREG00000008171	cnot4a	100	69.344	Poecilia_reticulata
ENSRNOG00000010795	Cnot4	100	97.606	ENSPPYG00000018026	CNOT4	100	97.606	Pongo_abelii
ENSRNOG00000010795	Cnot4	100	97.335	ENSPCOG00000019907	CNOT4	100	98.122	Propithecus_coquereli
ENSRNOG00000010795	Cnot4	94	95.387	ENSPVAG00000004905	CNOT4	88	95.387	Pteropus_vampyrus
ENSRNOG00000010795	Cnot4	99	90.566	ENSPNYG00000004276	cnot4a	91	90.566	Pundamilia_nyererei
ENSRNOG00000010795	Cnot4	100	93.727	ENSPNAG00000008679	cnot4b	100	65.929	Pygocentrus_nattereri
ENSRNOG00000010795	Cnot4	100	72.404	ENSPNAG00000020433	cnot4a	100	71.721	Pygocentrus_nattereri
ENSRNOG00000010795	Cnot4	100	97.335	ENSRBIG00000043977	CNOT4	100	97.335	Rhinopithecus_bieti
ENSRNOG00000010795	Cnot4	100	97.887	ENSSBOG00000020808	CNOT4	100	97.887	Saimiri_boliviensis_boliviensis
ENSRNOG00000010795	Cnot4	100	95.775	ENSSHAG00000013639	CNOT4	100	95.775	Sarcophilus_harrisii
ENSRNOG00000010795	Cnot4	100	91.912	ENSSFOG00015017285	CNOT4	92	91.912	Scleropages_formosus
ENSRNOG00000010795	Cnot4	100	90.074	ENSSFOG00015002019	cnot4a	91	90.074	Scleropages_formosus
ENSRNOG00000010795	Cnot4	99	90.566	ENSSMAG00000008614	cnot4a	91	90.566	Scophthalmus_maximus
ENSRNOG00000010795	Cnot4	100	62.990	ENSSDUG00000018585	cnot4b	100	63.022	Seriola_dumerili
ENSRNOG00000010795	Cnot4	99	90.566	ENSSDUG00000022635	cnot4a	91	90.566	Seriola_dumerili
ENSRNOG00000010795	Cnot4	100	51.128	ENSSLDG00000014347	cnot4b	100	51.005	Seriola_lalandi_dorsalis
ENSRNOG00000010795	Cnot4	99	90.566	ENSSLDG00000015770	cnot4a	91	90.566	Seriola_lalandi_dorsalis
ENSRNOG00000010795	Cnot4	100	83.310	ENSSPUG00000004677	CNOT4	100	83.590	Sphenodon_punctatus
ENSRNOG00000010795	Cnot4	99	90.566	ENSSPAG00000012329	cnot4a	91	90.566	Stegastes_partitus
ENSRNOG00000010795	Cnot4	100	97.195	ENSSSCG00000021354	CNOT4	100	97.195	Sus_scrofa
ENSRNOG00000010795	Cnot4	100	87.927	ENSTGUG00000009161	CNOT4	100	87.927	Taeniopygia_guttata
ENSRNOG00000010795	Cnot4	100	89.259	ENSTRUG00000016861	cnot4a	92	89.259	Takifugu_rubripes
ENSRNOG00000010795	Cnot4	100	69.106	ENSTNIG00000016000	cnot4a	100	68.691	Tetraodon_nigroviridis
ENSRNOG00000010795	Cnot4	94	91.369	ENSTBEG00000002202	CNOT4	86	92.262	Tupaia_belangeri
ENSRNOG00000010795	Cnot4	97	96.816	ENSTTRG00000005122	CNOT4	90	96.816	Tursiops_truncatus
ENSRNOG00000010795	Cnot4	100	86.816	ENSUAMG00000026759	CNOT4	94	98.339	Ursus_americanus
ENSRNOG00000010795	Cnot4	99	97.320	ENSUMAG00000015351	CNOT4	94	98.339	Ursus_maritimus
ENSRNOG00000010795	Cnot4	100	97.335	ENSVVUG00000006200	CNOT4	100	97.335	Vulpes_vulpes
ENSRNOG00000010795	Cnot4	97	98.519	ENSXETG00000010594	cnot4	89	98.519	Xenopus_tropicalis
ENSRNOG00000010795	Cnot4	86	70.750	ENSXCOG00000020824	cnot4a	98	70.579	Xiphophorus_couchianus
ENSRNOG00000010795	Cnot4	99	90.566	ENSXMAG00000016984	cnot4a	91	90.566	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0004842	ubiquitin-protein transferase activity	21873635.	IBA	Function
GO:0004842	ubiquitin-protein transferase activity	-	ISO	Function
GO:0006511	ubiquitin-dependent protein catabolic process	-	IEA	Process
GO:0006511	ubiquitin-dependent protein catabolic process	-	ISO	Process
GO:0016567	protein ubiquitination	21873635.	IBA	Process
GO:0030014	CCR4-NOT complex	21873635.	IBA	Component
GO:0030014	CCR4-NOT complex	-	ISO	Component
GO:0045652	regulation of megakaryocyte differentiation	-	IEA	Process
GO:0045652	regulation of megakaryocyte differentiation	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0051865	protein autoubiquitination	-	IEA	Process
GO:0051865	protein autoubiquitination	-	ISO	Process