EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000010799 (Gene tree)
Gene ID
310395
Gene Symbol
Noct
Alias
Ccr4|Ccrn4l|Ccrn4lb|LOC310395
Full Name
nocturnin
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Plus strand
Length
20209 bases
Position
chr2:140286661-140306869
Accession
1587344
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000014348Exo_endo_phosPF03372.232.8e-2411
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000014348-2609-ENSRNOP00000014348428 (aa)-Q9ET55
Gene Model
Click here to download ENSRNOG00000010799's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000010799's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000010799Noct9990.233ENSG00000151014NOCT9989.535Homo_sapiens
ENSRNOG00000010799Noct8461.081ENSAPOG00000005454noctb9961.081Acanthochromis_polyacanthus
ENSRNOG00000010799Noct8661.097ENSAPOG00000016421nocta8461.097Acanthochromis_polyacanthus
ENSRNOG00000010799Noct8892.857ENSAMEG00000011061NOCT9693.243Ailuropoda_melanoleuca
ENSRNOG00000010799Noct7663.444ENSACIG00000013054noctb8063.444Amphilophus_citrinellus
ENSRNOG00000010799Noct9956.291ENSAOCG00000014089nocta9955.629Amphiprion_ocellaris
ENSRNOG00000010799Noct8458.656ENSAOCG00000005363noctb9958.656Amphiprion_ocellaris
ENSRNOG00000010799Noct8458.915ENSAPEG00000015529noctb9958.915Amphiprion_percula
ENSRNOG00000010799Noct9956.416ENSAPEG00000018097nocta9955.752Amphiprion_percula
ENSRNOG00000010799Noct8458.290ENSATEG00000022975noctb9957.761Anabas_testudineus
ENSRNOG00000010799Noct8662.435ENSATEG00000015612nocta9462.435Anabas_testudineus
ENSRNOG00000010799Noct8680.488ENSACAG00000001961NOCT9880.488Anolis_carolinensis
ENSRNOG00000010799Noct10090.255ENSANAG00000009701NOCT10089.791Aotus_nancymaae
ENSRNOG00000010799Noct8459.563ENSACLG00000010843noctb9759.563Astatotilapia_calliptera
ENSRNOG00000010799Noct9955.928ENSAMXG00000002383nocta8461.702Astyanax_mexicanus
ENSRNOG00000010799Noct9988.290ENSBTAG00000005998NOCT10088.290Bos_taurus
ENSRNOG00000010799Noct10091.589ENSCJAG00000003158NOCT10091.589Callithrix_jacchus
ENSRNOG00000010799Noct8595.068ENSCAFG00000003725NOCT10095.068Canis_familiaris
ENSRNOG00000010799Noct10090.187ENSCAFG00020020824NOCT10089.486Canis_lupus_dingo
ENSRNOG00000010799Noct9988.525ENSCHIG00000023612NOCT8188.525Capra_hircus
ENSRNOG00000010799Noct6490.580ENSTSYG00000032273NOCT8890.614Carlito_syrichta
ENSRNOG00000010799Noct8693.767ENSCAPG00000005005NOCT9593.767Cavia_aperea
ENSRNOG00000010799Noct10088.657ENSCPOG00000003827NOCT10088.657Cavia_porcellus
ENSRNOG00000010799Noct10090.719ENSCCAG00000022628NOCT10090.255Cebus_capucinus
ENSRNOG00000010799Noct8968.668ENSCATG00000012533-9268.548Cercocebus_atys
ENSRNOG00000010799Noct10089.559ENSCATG00000041737-10088.631Cercocebus_atys
ENSRNOG00000010799Noct9985.012ENSCLAG00000003384NOCT9985.012Chinchilla_lanigera
ENSRNOG00000010799Noct8594.795ENSCSAG00000003545NOCT10094.795Chlorocebus_sabaeus
ENSRNOG00000010799Noct8593.973ENSCHOG00000004354NOCT9993.973Choloepus_hoffmanni
ENSRNOG00000010799Noct10076.053ENSCPBG00000027624NOCT9276.275Chrysemys_picta_bellii
ENSRNOG00000010799Noct8979.790ENSCANG00000039017-9580.270Colobus_angolensis_palliatus
ENSRNOG00000010799Noct10090.023ENSCANG00000031969-10089.095Colobus_angolensis_palliatus
ENSRNOG00000010799Noct10094.860ENSCGRG00001021050Noct10094.860Cricetulus_griseus_chok1gshd
ENSRNOG00000010799Noct8995.778ENSCGRG00000014052Noct9795.957Cricetulus_griseus_crigri
ENSRNOG00000010799Noct8459.409ENSCSEG00000014449noctb9759.409Cynoglossus_semilaevis
ENSRNOG00000010799Noct8761.440ENSCVAG00000001857nocta8166.087Cyprinodon_variegatus
ENSRNOG00000010799Noct8558.421ENSCVAG00000001093noctb9958.421Cyprinodon_variegatus
ENSRNOG00000010799Noct9958.050ENSDARG00000077726nocta8763.421Danio_rerio
ENSRNOG00000010799Noct8463.539ENSDARG00000078525noctb9963.539Danio_rerio
ENSRNOG00000010799Noct10090.509ENSDNOG00000036912NOCT10090.046Dasypus_novemcinctus
ENSRNOG00000010799Noct9185.204ENSDORG00000000869Noct10089.130Dipodomys_ordii
ENSRNOG00000010799Noct6648.675FBgn0261808cu7148.675Drosophila_melanogaster
ENSRNOG00000010799Noct10089.327ENSEASG00005007871NOCT10089.327Equus_asinus_asinus
ENSRNOG00000010799Noct10089.327ENSECAG00000022676NOCT10089.327Equus_caballus
ENSRNOG00000010799Noct5588.462ENSEEUG00000010558-9988.462Erinaceus_europaeus
ENSRNOG00000010799Noct6487.868ENSEEUG00000013650-10087.868Erinaceus_europaeus
ENSRNOG00000010799Noct9456.148ENSELUG00000002538nocta9862.740Esox_lucius
ENSRNOG00000010799Noct8559.788ENSELUG00000011415noctb8759.788Esox_lucius
ENSRNOG00000010799Noct10090.487ENSFCAG00000030026NOCT10089.791Felis_catus
ENSRNOG00000010799Noct8583.014ENSFALG00000004876NOCT10083.014Ficedula_albicollis
ENSRNOG00000010799Noct6595.307ENSFDAG00000018163NOCT10095.307Fukomys_damarensis
ENSRNOG00000010799Noct8961.519ENSFHEG00000005067nocta9460.192Fundulus_heteroclitus
ENSRNOG00000010799Noct8456.736ENSFHEG00000013623noctb9956.995Fundulus_heteroclitus
ENSRNOG00000010799Noct8782.210ENSGALG00000032957NOCT9682.210Gallus_gallus
ENSRNOG00000010799Noct8861.499ENSGAFG00000019587nocta8463.130Gambusia_affinis
ENSRNOG00000010799Noct8459.686ENSGAFG00000015232noctb9959.948Gambusia_affinis
ENSRNOG00000010799Noct8585.753ENSGAGG00000004412NOCT10085.753Gopherus_agassizii
ENSRNOG00000010799Noct9975.058ENSGGOG00000028610-8595.668Gorilla_gorilla
ENSRNOG00000010799Noct7662.952ENSHBUG00000001687noctb9162.952Haplochromis_burtoni
ENSRNOG00000010799Noct10085.280ENSHGLG00000019383NOCT10085.748Heterocephalus_glaber_female
ENSRNOG00000010799Noct8893.899ENSHGLG00100012584NOCT9894.595Heterocephalus_glaber_male
ENSRNOG00000010799Noct8457.838ENSHCOG00000013999noctb9957.838Hippocampus_comes
ENSRNOG00000010799Noct9856.404ENSHCOG00000005299nocta9955.955Hippocampus_comes
ENSRNOG00000010799Noct9954.649ENSIPUG00000017932Ccrn4l8461.247Ictalurus_punctatus
ENSRNOG00000010799Noct8595.616ENSSTOG00000014818NOCT9995.616Ictidomys_tridecemlineatus
ENSRNOG00000010799Noct10088.710ENSJJAG00000019776Noct10088.222Jaculus_jaculus
ENSRNOG00000010799Noct8559.383ENSKMAG00000019996noctb8159.383Kryptolebias_marmoratus
ENSRNOG00000010799Noct8662.857ENSKMAG00000001493nocta8662.857Kryptolebias_marmoratus
ENSRNOG00000010799Noct8553.846ENSLBEG00000021526-9953.846Labrus_bergylta
ENSRNOG00000010799Noct8560.630ENSLBEG00000017977noctb9960.582Labrus_bergylta
ENSRNOG00000010799Noct9061.443ENSLBEG00000024022nocta8860.688Labrus_bergylta
ENSRNOG00000010799Noct10067.634ENSLACG00000015874NOCT10067.411Latimeria_chalumnae
ENSRNOG00000010799Noct10066.517ENSLOCG00000010593nocta10065.843Lepisosteus_oculatus
ENSRNOG00000010799Noct8693.750ENSLAFG00000017184NOCT10093.750Loxodonta_africana
ENSRNOG00000010799Noct9571.921ENSMFAG00000045037-9968.558Macaca_fascicularis
ENSRNOG00000010799Noct10090.023ENSMFAG00000002713-10089.095Macaca_fascicularis
ENSRNOG00000010799Noct9176.515ENSMMUG00000030791-9775.505Macaca_mulatta
ENSRNOG00000010799Noct8595.068ENSMMUG00000004983-10095.068Macaca_mulatta
ENSRNOG00000010799Noct8968.407ENSMNEG00000007123-9268.649Macaca_nemestrina
ENSRNOG00000010799Noct10090.023ENSMNEG00000042407-10089.095Macaca_nemestrina
ENSRNOG00000010799Noct8569.672ENSMLEG00000029801-10069.672Mandrillus_leucophaeus
ENSRNOG00000010799Noct10090.023ENSMLEG00000040699-10089.095Mandrillus_leucophaeus
ENSRNOG00000010799Noct8558.869ENSMAMG00000006732noctb9959.343Mastacembelus_armatus
ENSRNOG00000010799Noct9957.883ENSMAMG00000002501nocta8862.274Mastacembelus_armatus
ENSRNOG00000010799Noct8457.592ENSMZEG00005011616noctb9757.592Maylandia_zebra
ENSRNOG00000010799Noct8782.306ENSMGAG00000002778NOCT9682.480Meleagris_gallopavo
ENSRNOG00000010799Noct8596.438ENSMAUG00000013688Noct10096.438Mesocricetus_auratus
ENSRNOG00000010799Noct8594.247ENSMICG00000046478NOCT10094.247Microcebus_murinus
ENSRNOG00000010799Noct10092.991ENSMOCG00000013676Noct9992.991Microtus_ochrogaster
ENSRNOG00000010799Noct8660.825ENSMMOG00000001406nocta9761.082Mola_mola
ENSRNOG00000010799Noct8456.593ENSMMOG00000006622noctb9956.593Mola_mola
ENSRNOG00000010799Noct9979.821ENSMODG00000000087NOCT9979.821Monodelphis_domestica
ENSRNOG00000010799Noct9756.081ENSMALG00000000329nocta9456.081Monopterus_albus
ENSRNOG00000010799Noct8559.358ENSMALG00000021977noctb9959.358Monopterus_albus
ENSRNOG00000010799Noct10097.436MGP_CAROLIEiJ_G0024971Noct10097.436Mus_caroli
ENSRNOG00000010799Noct10097.436ENSMUSG00000023087Noct10097.808Mus_musculus
ENSRNOG00000010799Noct10097.902MGP_PahariEiJ_G0026412Noct10097.902Mus_pahari
ENSRNOG00000010799Noct10097.436MGP_SPRETEiJ_G0025906Noct10097.436Mus_spretus
ENSRNOG00000010799Noct8595.890ENSMPUG00000016137NOCT10095.890Mustela_putorius_furo
ENSRNOG00000010799Noct8688.859ENSMLUG00000009023NOCT9988.859Myotis_lucifugus
ENSRNOG00000010799Noct8595.890ENSNGAG00000010135Noct10095.890Nannospalax_galili
ENSRNOG00000010799Noct8572.414ENSNBRG00000017964noctb8359.730Neolamprologus_brichardi
ENSRNOG00000010799Noct8595.055ENSNLEG00000014018NOCT9995.055Nomascus_leucogenys
ENSRNOG00000010799Noct8590.959ENSMEUG00000009500NOCT9990.959Notamacropus_eugenii
ENSRNOG00000010799Noct10087.471ENSOPRG00000003306NOCT10087.471Ochotona_princeps
ENSRNOG00000010799Noct10089.327ENSODEG00000003057NOCT10089.327Octodon_degus
ENSRNOG00000010799Noct8559.621ENSONIG00000003358noctb9958.115Oreochromis_niloticus
ENSRNOG00000010799Noct8480.000ENSOANG00000013761NOCT8380.000Ornithorhynchus_anatinus
ENSRNOG00000010799Noct10089.327ENSOCUG00000005465NOCT10088.631Oryctolagus_cuniculus
ENSRNOG00000010799Noct8559.574ENSORLG00000002100noctb8959.574Oryzias_latipes
ENSRNOG00000010799Noct8460.054ENSORLG00020013826noctb9960.054Oryzias_latipes_hni
ENSRNOG00000010799Noct9956.916ENSORLG00015019270nocta9956.720Oryzias_latipes_hsok
ENSRNOG00000010799Noct8558.763ENSORLG00015013405noctb9258.763Oryzias_latipes_hsok
ENSRNOG00000010799Noct8660.322ENSOMEG00000021625noctb9260.322Oryzias_melastigma
ENSRNOG00000010799Noct9956.720ENSOMEG00000010743nocta8662.299Oryzias_melastigma
ENSRNOG00000010799Noct10090.421ENSOGAG00000008532NOCT10090.421Otolemur_garnettii
ENSRNOG00000010799Noct8594.231ENSOARG00000014103NOCT9093.973Ovis_aries
ENSRNOG00000010799Noct8694.309ENSPPAG00000042856NOCT9995.055Pan_paniscus
ENSRNOG00000010799Noct10090.487ENSPPRG00000009488NOCT10089.791Panthera_pardus
ENSRNOG00000010799Noct8595.068ENSPTIG00000008672NOCT10095.068Panthera_tigris_altaica
ENSRNOG00000010799Noct9990.233ENSPTRG00000016448NOCT9995.055Pan_troglodytes
ENSRNOG00000010799Noct10090.023ENSPANG00000029213NOCT10089.095Papio_anubis
ENSRNOG00000010799Noct8560.548ENSPKIG00000013368NOCT10060.548Paramormyrops_kingsleyae
ENSRNOG00000010799Noct10058.916ENSPKIG00000022066nocta10058.916Paramormyrops_kingsleyae
ENSRNOG00000010799Noct10075.166ENSPSIG00000010338NOCT9175.166Pelodiscus_sinensis
ENSRNOG00000010799Noct8661.685ENSPMGG00000004558nocta8961.622Periophthalmus_magnuspinnatus
ENSRNOG00000010799Noct8461.022ENSPMGG00000019525noctb9961.022Periophthalmus_magnuspinnatus
ENSRNOG00000010799Noct8596.438ENSPEMG00000016096Noct10096.438Peromyscus_maniculatus_bairdii
ENSRNOG00000010799Noct8349.589ENSPMAG00000002990nocta9849.589Petromyzon_marinus
ENSRNOG00000010799Noct10079.560ENSPCIG00000027121NOCT10080.000Phascolarctos_cinereus
ENSRNOG00000010799Noct8862.371ENSPFOG00000004800nocta8463.492Poecilia_formosa
ENSRNOG00000010799Noct8559.021ENSPFOG00000015717noctb9959.375Poecilia_formosa
ENSRNOG00000010799Noct8459.115ENSPLAG00000016228noctb9959.375Poecilia_latipinna
ENSRNOG00000010799Noct8563.636ENSPLAG00000004749nocta10063.636Poecilia_latipinna
ENSRNOG00000010799Noct8458.594ENSPMEG00000019690noctb9958.854Poecilia_mexicana
ENSRNOG00000010799Noct8663.564ENSPMEG00000008265nocta9164.362Poecilia_mexicana
ENSRNOG00000010799Noct8662.698ENSPREG00000006876nocta8463.228Poecilia_reticulata
ENSRNOG00000010799Noct8458.333ENSPREG00000001623noctb9958.594Poecilia_reticulata
ENSRNOG00000010799Noct9990.233ENSPPYG00000015067NOCT9989.535Pongo_abelii
ENSRNOG00000010799Noct10077.262ENSPCAG00000016793NOCT10077.262Procavia_capensis
ENSRNOG00000010799Noct10087.414ENSPCOG00000013805NOCT10088.330Propithecus_coquereli
ENSRNOG00000010799Noct10092.056ENSPVAG00000017841NOCT10092.056Pteropus_vampyrus
ENSRNOG00000010799Noct8459.290ENSPNYG00000003447noctb9759.290Pundamilia_nyererei
ENSRNOG00000010799Noct9957.174ENSPNAG00000029426nocta9957.174Pygocentrus_nattereri
ENSRNOG00000010799Noct9571.675ENSRBIG00000040138-8676.486Rhinopithecus_bieti
ENSRNOG00000010799Noct10090.023ENSRBIG00000032388-10089.095Rhinopithecus_bieti
ENSRNOG00000010799Noct10090.023ENSRROG00000032107-10089.095Rhinopithecus_roxellana
ENSRNOG00000010799Noct9382.576ENSRROG00000043125-9485.405Rhinopithecus_roxellana
ENSRNOG00000010799Noct8994.226ENSSBOG00000022743NOCT9795.135Saimiri_boliviensis_boliviensis
ENSRNOG00000010799Noct9088.083ENSSHAG00000004440NOCT9391.507Sarcophilus_harrisii
ENSRNOG00000010799Noct8667.027ENSSFOG00015024047NOCT9367.027Scleropages_formosus
ENSRNOG00000010799Noct9958.315ENSSFOG00015019938noctb9964.770Scleropages_formosus
ENSRNOG00000010799Noct9955.361ENSSMAG00000015100nocta9855.044Scophthalmus_maximus
ENSRNOG00000010799Noct8560.054ENSSMAG00000012233noctb8960.054Scophthalmus_maximus
ENSRNOG00000010799Noct9958.575ENSSDUG00000000870nocta9958.797Seriola_dumerili
ENSRNOG00000010799Noct8461.622ENSSDUG00000019799noctb9962.162Seriola_dumerili
ENSRNOG00000010799Noct9958.352ENSSLDG00000007584nocta9958.575Seriola_lalandi_dorsalis
ENSRNOG00000010799Noct8857.921ENSSLDG00000008012noctb9759.591Seriola_lalandi_dorsalis
ENSRNOG00000010799Noct8567.033ENSSARG00000008892NOCT9967.033Sorex_araneus
ENSRNOG00000010799Noct9081.606ENSSPUG00000008160NOCT9383.514Sphenodon_punctatus
ENSRNOG00000010799Noct8961.042ENSSPAG00000023537nocta8961.954Stegastes_partitus
ENSRNOG00000010799Noct8461.622ENSSPAG00000010999noctb9961.622Stegastes_partitus
ENSRNOG00000010799Noct9989.437ENSSSCG00000024596NOCT9993.611Sus_scrofa
ENSRNOG00000010799Noct8682.880ENSTGUG00000002465-10082.656Taeniopygia_guttata
ENSRNOG00000010799Noct8682.609ENSTGUG00000014883-10082.609Taeniopygia_guttata
ENSRNOG00000010799Noct9159.801ENSTRUG00000004981nocta9162.304Takifugu_rubripes
ENSRNOG00000010799Noct8458.556ENSTRUG00000014977noctb10058.289Takifugu_rubripes
ENSRNOG00000010799Noct7760.909ENSTNIG00000012346noctb9960.909Tetraodon_nigroviridis
ENSRNOG00000010799Noct8760.000ENSTNIG00000014249nocta10060.000Tetraodon_nigroviridis
ENSRNOG00000010799Noct6596.390ENSTBEG00000009092NOCT7596.390Tupaia_belangeri
ENSRNOG00000010799Noct5792.254ENSTTRG00000013558NOCT6192.254Tursiops_truncatus
ENSRNOG00000010799Noct9989.744ENSUAMG00000011467NOCT10088.657Ursus_americanus
ENSRNOG00000010799Noct8593.939ENSUMAG00000014943NOCT9993.939Ursus_maritimus
ENSRNOG00000010799Noct10086.806ENSVPAG00000003667NOCT10086.806Vicugna_pacos
ENSRNOG00000010799Noct8893.333ENSVVUG00000021461NOCT10095.342Vulpes_vulpes
ENSRNOG00000010799Noct8876.658ENSXETG00000016899noct10068.122Xenopus_tropicalis
ENSRNOG00000010799Noct8664.000ENSXCOG00000013730nocta8764.000Xiphophorus_couchianus
ENSRNOG00000010799Noct8460.705ENSXCOG00000012036noctb9961.186Xiphophorus_couchianus
ENSRNOG00000010799Noct8458.594ENSXMAG00000017762noctb9958.854Xiphophorus_maculatus
ENSRNOG00000010799Noct9659.286ENSXMAG00000029143NOCT8963.298Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000290deadenylation-dependent decapping of nuclear-transcribed mRNA-IEAProcess
GO:0000290deadenylation-dependent decapping of nuclear-transcribed mRNA-ISOProcess
GO:0000932P-body-IEAComponent
GO:0000932P-body-ISOComponent
GO:0003729mRNA binding-ISOFunction
GO:0003729mRNA binding-ISSFunction
GO:0004535poly(A)-specific ribonuclease activity-ISOFunction
GO:0004535poly(A)-specific ribonuclease activity-ISSFunction
GO:0005634nucleus-ISOComponent
GO:0005634nucleus-ISSComponent
GO:0005737cytoplasm-ISOComponent
GO:0005737cytoplasm-ISSComponent
GO:0006397mRNA processing-IEAProcess
GO:0007623circadian rhythm-ISOProcess
GO:0009991response to extracellular stimulus-ISOProcess
GO:0009991response to extracellular stimulus-ISSProcess
GO:0010629negative regulation of gene expression-ISOProcess
GO:0010629negative regulation of gene expression-ISSProcess
GO:0032496response to lipopolysaccharide-ISOProcess
GO:0032496response to lipopolysaccharide-ISSProcess
GO:0032922circadian regulation of gene expression-ISOProcess
GO:0032922circadian regulation of gene expression-ISSProcess
GO:0033962cytoplasmic mRNA processing body assembly-IEAProcess
GO:0033962cytoplasmic mRNA processing body assembly-ISOProcess
GO:0042752regulation of circadian rhythm-ISOProcess
GO:0042752regulation of circadian rhythm-ISSProcess
GO:0045600positive regulation of fat cell differentiation-ISOProcess
GO:0045600positive regulation of fat cell differentiation-ISSProcess
GO:0045668negative regulation of osteoblast differentiation-ISOProcess
GO:0045668negative regulation of osteoblast differentiation-ISSProcess
GO:0045995regulation of embryonic development-ISOProcess
GO:0045995regulation of embryonic development-ISSProcess
GO:0046872metal ion binding-IEAFunction
GO:0048255mRNA stabilization-ISOProcess
GO:0048255mRNA stabilization-ISSProcess
GO:0048471perinuclear region of cytoplasm-ISOComponent
GO:0048471perinuclear region of cytoplasm-ISSComponent
GO:0090503RNA phosphodiester bond hydrolysis, exonucleolytic-IEAProcess

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