EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRNOG00000011065 (Gene tree)
Gene ID: -
Gene Symbol: AC126899.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 363 bases
Position: chr19:44396248-44396610
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000072528	LSM	PF01423.22	2.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000014753	AC126899.1-201	210	-	ENSRNOP00000072528	70 (aa)	-	A0A0G2K375

Gene Model

Click here to download ENSRNOG00000011065's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000011065's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000011065	AC126899.1	76	92.453	ENSRNOG00000048725	Lsm2	56	92.453

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000011065	AC126899.1	76	92.453	ENSG00000204392	LSM2	56	92.453	Homo_sapiens
ENSRNOG00000011065	AC126899.1	76	92.453	ENSAPOG00000017967	si:ch73-14h10.2	56	92.453	Acanthochromis_polyacanthus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSAMEG00000006483	LSM2	56	92.453	Ailuropoda_melanoleuca
ENSRNOG00000011065	AC126899.1	76	92.453	ENSATEG00000011376	si:ch73-14h10.2	56	92.453	Anabas_testudineus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSACAG00000017281	LSM2	51	92.453	Anolis_carolinensis
ENSRNOG00000011065	AC126899.1	76	92.453	ENSANAG00000028372	LSM2	56	92.453	Aotus_nancymaae
ENSRNOG00000011065	AC126899.1	76	92.453	ENSACLG00000024717	smx5	56	92.453	Astatotilapia_calliptera
ENSRNOG00000011065	AC126899.1	76	92.453	ENSAMXG00000036868	si:ch73-14h10.2	56	92.453	Astyanax_mexicanus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSBTAG00000005634	LSM2	56	92.453	Bos_taurus
ENSRNOG00000011065	AC126899.1	76	81.132	WBGene00001808	gut-2	55	81.132	Caenorhabditis_elegans
ENSRNOG00000011065	AC126899.1	76	92.453	ENSCJAG00000040899	LSM2	56	92.453	Callithrix_jacchus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSCHIG00000016153	LSM2	56	92.453	Capra_hircus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSTSYG00000034844	LSM2	56	92.453	Carlito_syrichta
ENSRNOG00000011065	AC126899.1	76	92.453	ENSTSYG00000030015	-	56	92.453	Carlito_syrichta
ENSRNOG00000011065	AC126899.1	76	92.453	ENSCPOG00000021053	LSM2	56	92.453	Cavia_porcellus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSCCAG00000024276	LSM2	56	92.453	Cebus_capucinus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSCATG00000013737	LSM2	56	92.453	Cercocebus_atys
ENSRNOG00000011065	AC126899.1	76	92.453	ENSCLAG00000008081	LSM2	56	92.453	Chinchilla_lanigera
ENSRNOG00000011065	AC126899.1	76	92.453	ENSCSAG00000008800	LSM2	56	92.453	Chlorocebus_sabaeus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSCHOG00000007702	LSM2	56	92.453	Choloepus_hoffmanni
ENSRNOG00000011065	AC126899.1	76	92.453	ENSCING00000022677	-	56	92.453	Ciona_intestinalis
ENSRNOG00000011065	AC126899.1	76	92.453	ENSCANG00000039576	LSM2	56	92.453	Colobus_angolensis_palliatus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSCGRG00001013932	Lsm2	56	92.453	Cricetulus_griseus_chok1gshd
ENSRNOG00000011065	AC126899.1	76	92.453	ENSCSEG00000002911	si:ch73-14h10.2	56	92.453	Cynoglossus_semilaevis
ENSRNOG00000011065	AC126899.1	76	92.453	ENSCVAG00000015394	si:ch73-14h10.2	50	92.453	Cyprinodon_variegatus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSDARG00000070867	smx5	56	92.453	Danio_rerio
ENSRNOG00000011065	AC126899.1	76	92.453	ENSDNOG00000002633	LSM2	56	92.453	Dasypus_novemcinctus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSDORG00000026571	Lsm2	56	92.453	Dipodomys_ordii
ENSRNOG00000011065	AC126899.1	76	88.679	FBgn0036277	CG10418	56	88.679	Drosophila_melanogaster
ENSRNOG00000011065	AC126899.1	76	92.453	ENSELUG00000008241	smx5	56	92.453	Esox_lucius
ENSRNOG00000011065	AC126899.1	76	92.453	ENSFCAG00000045887	LSM2	56	92.453	Felis_catus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSFDAG00000000390	LSM2	56	92.453	Fukomys_damarensis
ENSRNOG00000011065	AC126899.1	76	90.566	ENSFHEG00000009619	si:ch73-14h10.2	55	90.566	Fundulus_heteroclitus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSGMOG00000019208	si:ch73-14h10.2	56	92.453	Gadus_morhua
ENSRNOG00000011065	AC126899.1	76	92.453	ENSGAFG00000017286	si:ch73-14h10.2	56	92.453	Gambusia_affinis
ENSRNOG00000011065	AC126899.1	76	92.453	ENSGACG00000003827	si:ch73-14h10.2	56	92.453	Gasterosteus_aculeatus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSGAGG00000012458	LSM2	56	92.453	Gopherus_agassizii
ENSRNOG00000011065	AC126899.1	76	92.453	ENSGGOG00000011383	LSM2	56	92.453	Gorilla_gorilla
ENSRNOG00000011065	AC126899.1	76	92.453	ENSHGLG00000011299	LSM2	56	92.453	Heterocephalus_glaber_female
ENSRNOG00000011065	AC126899.1	76	92.453	ENSHGLG00100017194	LSM2	56	92.453	Heterocephalus_glaber_male
ENSRNOG00000011065	AC126899.1	76	92.453	ENSHCOG00000014057	si:ch73-14h10.2	56	92.453	Hippocampus_comes
ENSRNOG00000011065	AC126899.1	76	92.453	ENSIPUG00000010539	lsm2	56	92.453	Ictalurus_punctatus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSSTOG00000013144	LSM2	56	92.453	Ictidomys_tridecemlineatus
ENSRNOG00000011065	AC126899.1	83	60.345	ENSJJAG00000019477	-	80	60.345	Jaculus_jaculus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSKMAG00000014909	si:ch73-14h10.2	56	92.453	Kryptolebias_marmoratus
ENSRNOG00000011065	AC126899.1	76	90.566	ENSLBEG00000025781	si:ch73-14h10.2	55	90.566	Labrus_bergylta
ENSRNOG00000011065	AC126899.1	76	92.453	ENSLACG00000015064	LSM2	56	92.453	Latimeria_chalumnae
ENSRNOG00000011065	AC126899.1	76	92.453	ENSLOCG00000005228	si:ch73-14h10.2	56	92.453	Lepisosteus_oculatus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSLAFG00000016139	LSM2	56	92.453	Loxodonta_africana
ENSRNOG00000011065	AC126899.1	76	92.453	ENSMFAG00000001016	LSM2	56	92.453	Macaca_fascicularis
ENSRNOG00000011065	AC126899.1	76	77.358	ENSMMUG00000045473	-	52	77.358	Macaca_mulatta
ENSRNOG00000011065	AC126899.1	76	92.453	ENSMMUG00000006832	LSM2	56	92.453	Macaca_mulatta
ENSRNOG00000011065	AC126899.1	76	92.453	ENSMNEG00000045355	LSM2	56	92.453	Macaca_nemestrina
ENSRNOG00000011065	AC126899.1	76	75.472	ENSMLEG00000031181	-	52	75.472	Mandrillus_leucophaeus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSMLEG00000037369	-	56	92.453	Mandrillus_leucophaeus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSMZEG00005008688	si:ch73-14h10.2	55	92.453	Maylandia_zebra
ENSRNOG00000011065	AC126899.1	76	92.453	ENSMAUG00000021966	Lsm2	56	92.453	Mesocricetus_auratus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSMOCG00000015306	Lsm2	56	92.453	Microtus_ochrogaster
ENSRNOG00000011065	AC126899.1	76	90.566	ENSMMOG00000005603	si:ch73-14h10.2	56	90.566	Mola_mola
ENSRNOG00000011065	AC126899.1	76	92.453	ENSMODG00000015177	LSM2	56	92.453	Monodelphis_domestica
ENSRNOG00000011065	AC126899.1	76	92.453	ENSMALG00000016490	si:ch73-14h10.2	56	92.453	Monopterus_albus
ENSRNOG00000011065	AC126899.1	76	92.453	MGP_CAROLIEiJ_G0021490	Lsm2	56	92.453	Mus_caroli
ENSRNOG00000011065	AC126899.1	76	92.453	ENSMUSG00000007050	Lsm2	56	92.453	Mus_musculus
ENSRNOG00000011065	AC126899.1	76	92.453	MGP_PahariEiJ_G0020485	Lsm2	56	92.453	Mus_pahari
ENSRNOG00000011065	AC126899.1	76	92.453	MGP_SPRETEiJ_G0022395	Lsm2	56	92.453	Mus_spretus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSNGAG00000003997	Lsm2	56	92.453	Nannospalax_galili
ENSRNOG00000011065	AC126899.1	76	92.453	ENSNBRG00000012904	si:ch73-14h10.2	55	92.453	Neolamprologus_brichardi
ENSRNOG00000011065	AC126899.1	76	92.453	ENSNLEG00000035542	LSM2	56	92.453	Nomascus_leucogenys
ENSRNOG00000011065	AC126899.1	76	92.453	ENSOPRG00000003668	LSM2	56	92.453	Ochotona_princeps
ENSRNOG00000011065	AC126899.1	76	92.453	ENSODEG00000017583	LSM2	56	92.453	Octodon_degus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSONIG00000019321	si:ch73-14h10.2	56	92.453	Oreochromis_niloticus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSOANG00000005398	LSM2	56	92.453	Ornithorhynchus_anatinus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSOCUG00000002583	LSM2	56	92.453	Oryctolagus_cuniculus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSORLG00000029858	si:ch73-14h10.2	56	92.453	Oryzias_latipes
ENSRNOG00000011065	AC126899.1	96	72.000	ENSORLG00020020223	smx5	64	72.000	Oryzias_latipes_hni
ENSRNOG00000011065	AC126899.1	96	73.333	ENSORLG00015000465	si:ch73-14h10.2	60	73.333	Oryzias_latipes_hsok
ENSRNOG00000011065	AC126899.1	76	92.453	ENSOMEG00000002892	si:ch73-14h10.2	56	92.453	Oryzias_melastigma
ENSRNOG00000011065	AC126899.1	76	92.453	ENSOARG00000004575	LSM2	56	92.453	Ovis_aries
ENSRNOG00000011065	AC126899.1	76	92.453	ENSPPAG00000032431	LSM2	56	92.453	Pan_paniscus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSPPRG00000015353	LSM2	56	92.453	Panthera_pardus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSPTIG00000010303	LSM2	56	92.453	Panthera_tigris_altaica
ENSRNOG00000011065	AC126899.1	76	92.453	ENSPTRG00000017986	LSM2	56	92.453	Pan_troglodytes
ENSRNOG00000011065	AC126899.1	76	92.453	ENSPANG00000024577	LSM2	56	92.453	Papio_anubis
ENSRNOG00000011065	AC126899.1	76	92.453	ENSPKIG00000007028	si:ch73-14h10.2	56	92.453	Paramormyrops_kingsleyae
ENSRNOG00000011065	AC126899.1	76	88.679	ENSPMGG00000018511	si:ch73-14h10.2	56	88.679	Periophthalmus_magnuspinnatus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSPCIG00000018560	-	54	92.453	Phascolarctos_cinereus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSPFOG00000001621	si:ch73-14h10.2	56	92.453	Poecilia_formosa
ENSRNOG00000011065	AC126899.1	76	92.453	ENSPLAG00000017165	si:ch73-14h10.2	56	92.453	Poecilia_latipinna
ENSRNOG00000011065	AC126899.1	76	92.453	ENSPMEG00000019574	si:ch73-14h10.2	56	92.453	Poecilia_mexicana
ENSRNOG00000011065	AC126899.1	76	90.566	ENSPREG00000016534	si:ch73-14h10.2	56	90.566	Poecilia_reticulata
ENSRNOG00000011065	AC126899.1	76	92.453	ENSPCAG00000013737	LSM2	56	92.453	Procavia_capensis
ENSRNOG00000011065	AC126899.1	76	92.453	ENSPCOG00000020134	LSM2	56	92.453	Propithecus_coquereli
ENSRNOG00000011065	AC126899.1	76	92.453	ENSPVAG00000012405	LSM2	56	92.453	Pteropus_vampyrus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSPNYG00000019298	smx5	56	92.453	Pundamilia_nyererei
ENSRNOG00000011065	AC126899.1	76	92.453	ENSPNAG00000027769	si:ch73-14h10.2	56	92.453	Pygocentrus_nattereri
ENSRNOG00000011065	AC126899.1	76	92.453	ENSRBIG00000010172	LSM2	56	92.453	Rhinopithecus_bieti
ENSRNOG00000011065	AC126899.1	76	92.453	ENSRROG00000030345	LSM2	56	92.453	Rhinopithecus_roxellana
ENSRNOG00000011065	AC126899.1	76	62.264	YBL026W	LSM2	56	62.264	Saccharomyces_cerevisiae
ENSRNOG00000011065	AC126899.1	76	92.453	ENSSBOG00000018943	LSM2	56	92.453	Saimiri_boliviensis_boliviensis
ENSRNOG00000011065	AC126899.1	76	92.453	ENSSFOG00015006734	lsm2	56	92.453	Scleropages_formosus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSSMAG00000001122	si:ch73-14h10.2	56	92.453	Scophthalmus_maximus
ENSRNOG00000011065	AC126899.1	87	83.607	ENSSDUG00000021605	smx5	56	92.453	Seriola_dumerili
ENSRNOG00000011065	AC126899.1	76	92.453	ENSSLDG00000002765	si:ch73-14h10.2	56	92.453	Seriola_lalandi_dorsalis
ENSRNOG00000011065	AC126899.1	76	92.453	ENSSPUG00000009631	LSM2	56	92.453	Sphenodon_punctatus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSSPAG00000016904	si:ch73-14h10.2	56	92.453	Stegastes_partitus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSSSCG00000039021	LSM2	56	92.453	Sus_scrofa
ENSRNOG00000011065	AC126899.1	76	90.566	ENSTRUG00000002093	si:ch73-14h10.2	56	90.566	Takifugu_rubripes
ENSRNOG00000011065	AC126899.1	76	92.453	ENSTNIG00000013770	si:ch73-14h10.2	79	92.453	Tetraodon_nigroviridis
ENSRNOG00000011065	AC126899.1	76	92.453	ENSTTRG00000014131	LSM2	56	92.453	Tursiops_truncatus
ENSRNOG00000011065	AC126899.1	76	92.453	ENSVPAG00000001761	LSM2	56	92.453	Vicugna_pacos
ENSRNOG00000011065	AC126899.1	76	92.453	ENSXETG00000024077	lsm2	56	92.453	Xenopus_tropicalis
ENSRNOG00000011065	AC126899.1	76	90.566	ENSXCOG00000006078	si:ch73-14h10.2	56	90.566	Xiphophorus_couchianus
ENSRNOG00000011065	AC126899.1	76	90.566	ENSXMAG00000028018	si:ch73-14h10.2	56	90.566	Xiphophorus_maculatus