EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000011167 (Gene tree)
Gene ID: 305827
Gene Symbol: Wdhd1
Alias: LOC305827
Full Name: WD repeat and HMG-box DNA binding protein 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 34400 bases
Position: chr15:24021674-24056073
Accession: 1310200
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000015100	eIF2A	PF08662.11	7.4e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000015100	-	4215	XM_006251795	ENSRNOP00000015100	1117 (aa)	XP_006251857	D3ZN63

Gene Model

Click here to download ENSRNOG00000011167's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000011167's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000011167	Wdhd1	100	81.416	ENSG00000198554	WDHD1	100	90.476	Homo_sapiens
ENSRNOG00000011167	Wdhd1	99	56.943	ENSAPOG00000001560	wdhd1	99	57.835	Acanthochromis_polyacanthus
ENSRNOG00000011167	Wdhd1	100	80.248	ENSAMEG00000014356	WDHD1	100	80.648	Ailuropoda_melanoleuca
ENSRNOG00000011167	Wdhd1	92	66.098	ENSACIG00000021530	wdhd1	99	57.067	Amphilophus_citrinellus
ENSRNOG00000011167	Wdhd1	99	58.217	ENSAOCG00000018123	wdhd1	99	58.392	Amphiprion_ocellaris
ENSRNOG00000011167	Wdhd1	73	64.951	ENSAPEG00000000157	wdhd1	99	57.434	Amphiprion_percula
ENSRNOG00000011167	Wdhd1	99	56.533	ENSATEG00000021986	wdhd1	99	57.168	Anabas_testudineus
ENSRNOG00000011167	Wdhd1	99	64.547	ENSACAG00000016303	WDHD1	99	65.271	Anolis_carolinensis
ENSRNOG00000011167	Wdhd1	99	56.038	ENSACLG00000009036	wdhd1	99	56.856	Astatotilapia_calliptera
ENSRNOG00000011167	Wdhd1	100	80.602	ENSBTAG00000019120	WDHD1	100	80.779	Bos_taurus
ENSRNOG00000011167	Wdhd1	100	80.213	ENSCJAG00000018208	WDHD1	100	80.035	Callithrix_jacchus
ENSRNOG00000011167	Wdhd1	89	80.119	ENSCAFG00000014989	WDHD1	100	79.920	Canis_familiaris
ENSRNOG00000011167	Wdhd1	100	79.590	ENSCHIG00000017956	WDHD1	100	80.214	Capra_hircus
ENSRNOG00000011167	Wdhd1	100	77.739	ENSTSYG00000000266	WDHD1	100	77.650	Carlito_syrichta
ENSRNOG00000011167	Wdhd1	55	85.397	ENSCCAG00000018389	WDHD1	100	74.816	Cebus_capucinus
ENSRNOG00000011167	Wdhd1	100	81.826	ENSCATG00000035221	WDHD1	100	81.649	Cercocebus_atys
ENSRNOG00000011167	Wdhd1	56	80.096	ENSCLAG00000013863	-	99	80.096	Chinchilla_lanigera
ENSRNOG00000011167	Wdhd1	98	80.814	ENSCSAG00000014757	WDHD1	100	80.633	Chlorocebus_sabaeus
ENSRNOG00000011167	Wdhd1	99	69.496	ENSCPBG00000020071	WDHD1	99	70.328	Chrysemys_picta_bellii
ENSRNOG00000011167	Wdhd1	93	82.759	ENSCANG00000037721	WDHD1	100	82.759	Colobus_angolensis_palliatus
ENSRNOG00000011167	Wdhd1	100	56.525	ENSDARG00000015998	wdhd1	97	66.780	Danio_rerio
ENSRNOG00000011167	Wdhd1	100	73.675	ENSDNOG00000006661	WDHD1	100	73.457	Dasypus_novemcinctus
ENSRNOG00000011167	Wdhd1	100	80.919	ENSECAG00000015412	WDHD1	97	80.477	Equus_caballus
ENSRNOG00000011167	Wdhd1	99	56.564	ENSELUG00000015575	wdhd1	96	65.191	Esox_lucius
ENSRNOG00000011167	Wdhd1	100	82.019	ENSFCAG00000023408	-	100	81.842	Felis_catus
ENSRNOG00000011167	Wdhd1	99	66.784	ENSGALG00000012199	WDHD1	99	67.313	Gallus_gallus
ENSRNOG00000011167	Wdhd1	75	75.089	ENSGAGG00000010665	-	93	76.232	Gopherus_agassizii
ENSRNOG00000011167	Wdhd1	100	80.779	ENSGGOG00000007744	WDHD1	100	80.602	Gorilla_gorilla
ENSRNOG00000011167	Wdhd1	100	78.527	ENSHGLG00000015105	WDHD1	100	78.793	Heterocephalus_glaber_female
ENSRNOG00000011167	Wdhd1	100	77.986	ENSHGLG00100001967	WDHD1	100	78.253	Heterocephalus_glaber_male
ENSRNOG00000011167	Wdhd1	100	55.595	ENSHCOG00000007286	wdhd1	100	55.154	Hippocampus_comes
ENSRNOG00000011167	Wdhd1	99	80.948	ENSSTOG00000020300	WDHD1	100	81.127	Ictidomys_tridecemlineatus
ENSRNOG00000011167	Wdhd1	100	72.663	ENSJJAG00000001164	Wdhd1	100	72.484	Jaculus_jaculus
ENSRNOG00000011167	Wdhd1	73	63.030	ENSLBEG00000024847	wdhd1	99	55.788	Labrus_bergylta
ENSRNOG00000011167	Wdhd1	100	59.792	ENSLACG00000019053	WDHD1	99	59.773	Latimeria_chalumnae
ENSRNOG00000011167	Wdhd1	99	58.019	ENSLOCG00000012086	wdhd1	99	58.648	Lepisosteus_oculatus
ENSRNOG00000011167	Wdhd1	99	80.387	ENSLAFG00000005385	WDHD1	100	80.475	Loxodonta_africana
ENSRNOG00000011167	Wdhd1	100	81.577	ENSMFAG00000032915	WDHD1	100	81.577	Macaca_fascicularis
ENSRNOG00000011167	Wdhd1	100	81.915	ENSMMUG00000000302	WDHD1	100	81.738	Macaca_mulatta
ENSRNOG00000011167	Wdhd1	100	81.577	ENSMNEG00000032489	WDHD1	100	81.577	Macaca_nemestrina
ENSRNOG00000011167	Wdhd1	100	81.577	ENSMLEG00000035661	WDHD1	100	81.577	Mandrillus_leucophaeus
ENSRNOG00000011167	Wdhd1	99	57.467	ENSMAMG00000016742	wdhd1	99	57.267	Mastacembelus_armatus
ENSRNOG00000011167	Wdhd1	99	56.212	ENSMZEG00005015228	wdhd1	99	57.031	Maylandia_zebra
ENSRNOG00000011167	Wdhd1	99	66.111	ENSMGAG00000013676	WDHD1	99	66.989	Meleagris_gallopavo
ENSRNOG00000011167	Wdhd1	100	80.583	ENSMICG00000016239	WDHD1	100	79.788	Microcebus_murinus
ENSRNOG00000011167	Wdhd1	99	53.961	ENSMMOG00000007869	wdhd1	99	53.257	Mola_mola
ENSRNOG00000011167	Wdhd1	100	71.605	ENSMODG00000011703	WDHD1	100	70.988	Monodelphis_domestica
ENSRNOG00000011167	Wdhd1	56	92.369	MGP_CAROLIEiJ_G0019163	Wdhd1	98	92.369	Mus_caroli
ENSRNOG00000011167	Wdhd1	56	92.210	MGP_PahariEiJ_G0030180	Wdhd1	98	92.210	Mus_pahari
ENSRNOG00000011167	Wdhd1	100	76.481	ENSMPUG00000005542	WDHD1	100	76.393	Mustela_putorius_furo
ENSRNOG00000011167	Wdhd1	100	80.248	ENSMLUG00000010353	WDHD1	100	80.354	Myotis_lucifugus
ENSRNOG00000011167	Wdhd1	67	55.792	ENSNBRG00000010071	wdhd1	99	56.764	Neolamprologus_brichardi
ENSRNOG00000011167	Wdhd1	100	78.369	ENSNLEG00000012760	WDHD1	100	78.191	Nomascus_leucogenys
ENSRNOG00000011167	Wdhd1	92	61.057	ENSMEUG00000006706	WDHD1	92	62.035	Notamacropus_eugenii
ENSRNOG00000011167	Wdhd1	99	57.876	ENSONIG00000007084	wdhd1	99	57.867	Oreochromis_niloticus
ENSRNOG00000011167	Wdhd1	100	80.779	ENSOCUG00000004987	WDHD1	100	80.957	Oryctolagus_cuniculus
ENSRNOG00000011167	Wdhd1	94	56.968	ENSORLG00000019721	wdhd1	98	56.567	Oryzias_latipes
ENSRNOG00000011167	Wdhd1	99	55.937	ENSORLG00020007040	wdhd1	99	56.652	Oryzias_latipes_hni
ENSRNOG00000011167	Wdhd1	99	56.085	ENSORLG00015008848	wdhd1	99	56.778	Oryzias_latipes_hsok
ENSRNOG00000011167	Wdhd1	100	76.262	ENSOGAG00000003465	WDHD1	100	76.439	Otolemur_garnettii
ENSRNOG00000011167	Wdhd1	100	80.159	ENSOARG00000021081	WDHD1	100	80.779	Ovis_aries
ENSRNOG00000011167	Wdhd1	100	79.433	ENSPPAG00000035486	WDHD1	100	79.255	Pan_paniscus
ENSRNOG00000011167	Wdhd1	100	81.754	ENSPPRG00000007679	WDHD1	100	81.577	Panthera_pardus
ENSRNOG00000011167	Wdhd1	100	81.842	ENSPTIG00000013608	WDHD1	100	81.665	Panthera_tigris_altaica
ENSRNOG00000011167	Wdhd1	100	81.416	ENSPTRG00000006366	WDHD1	100	81.327	Pan_troglodytes
ENSRNOG00000011167	Wdhd1	100	81.028	ENSPANG00000017506	WDHD1	100	81.399	Papio_anubis
ENSRNOG00000011167	Wdhd1	99	54.948	ENSPKIG00000004863	wdhd1	99	54.917	Paramormyrops_kingsleyae
ENSRNOG00000011167	Wdhd1	99	67.428	ENSPSIG00000011635	WDHD1	99	69.694	Pelodiscus_sinensis
ENSRNOG00000011167	Wdhd1	100	81.488	ENSPPYG00000005834	WDHD1	100	81.311	Pongo_abelii
ENSRNOG00000011167	Wdhd1	100	73.628	ENSPVAG00000016064	WDHD1	100	73.828	Pteropus_vampyrus
ENSRNOG00000011167	Wdhd1	100	57.118	ENSPNAG00000013823	wdhd1	100	57.729	Pygocentrus_nattereri
ENSRNOG00000011167	Wdhd1	100	81.383	ENSRROG00000006993	WDHD1	100	81.206	Rhinopithecus_roxellana
ENSRNOG00000011167	Wdhd1	100	76.309	ENSSBOG00000034847	WDHD1	100	76.131	Saimiri_boliviensis_boliviensis
ENSRNOG00000011167	Wdhd1	98	71.286	ENSSHAG00000013551	WDHD1	100	71.377	Sarcophilus_harrisii
ENSRNOG00000011167	Wdhd1	99	55.240	ENSSFOG00015009950	wdhd1	99	55.270	Scleropages_formosus
ENSRNOG00000011167	Wdhd1	99	55.585	ENSSMAG00000007346	wdhd1	99	56.419	Scophthalmus_maximus
ENSRNOG00000011167	Wdhd1	99	53.565	ENSSDUG00000016996	wdhd1	99	54.298	Seriola_dumerili
ENSRNOG00000011167	Wdhd1	73	64.015	ENSSLDG00000021689	wdhd1	94	66.007	Seriola_lalandi_dorsalis
ENSRNOG00000011167	Wdhd1	100	79.929	ENSSSCG00000005052	WDHD1	100	80.106	Sus_scrofa
ENSRNOG00000011167	Wdhd1	99	55.654	ENSTNIG00000018803	wdhd1	99	55.781	Tetraodon_nigroviridis
ENSRNOG00000011167	Wdhd1	100	76.413	ENSTTRG00000003314	WDHD1	100	76.590	Tursiops_truncatus
ENSRNOG00000011167	Wdhd1	61	83.140	ENSUAMG00000015360	-	96	83.140	Ursus_americanus
ENSRNOG00000011167	Wdhd1	100	81.222	ENSUMAG00000015946	WDHD1	100	81.045	Ursus_maritimus
ENSRNOG00000011167	Wdhd1	100	79.045	ENSVPAG00000008394	WDHD1	100	79.222	Vicugna_pacos
ENSRNOG00000011167	Wdhd1	100	80.230	ENSVVUG00000029613	WDHD1	100	80.053	Vulpes_vulpes
ENSRNOG00000011167	Wdhd1	100	60.789	ENSXETG00000012210	wdhd1	100	61.126	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000278	mitotic cell cycle	21873635.	IBA	Process
GO:0000775	chromosome, centromeric region	-	ISO	Component
GO:0003677	DNA binding	-	IEA	Function
GO:0003682	chromatin binding	21873635.	IBA	Function
GO:0003682	chromatin binding	-	ISO	Function
GO:0003723	RNA binding	-	ISO	Function
GO:0006261	DNA-dependent DNA replication	21873635.	IBA	Process
GO:0006281	DNA repair	21873635.	IBA	Process
GO:0006396	RNA processing	-	ISO	Process
GO:0006974	cellular response to DNA damage stimulus	21873635.	IBA	Process
GO:0031298	replication fork protection complex	21873635.	IBA	Component
GO:0033044	regulation of chromosome organization	-	ISO	Process
GO:0043596	nuclear replication fork	21873635.	IBA	Component
GO:0070063	RNA polymerase binding	-	ISO	Function
GO:0070829	heterochromatin maintenance	-	ISO	Process