EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000011253 (Gene tree)
Gene ID: 306504
Gene Symbol: Trmt9b
Alias: LOC306504|RGD1304810
Full Name: tRNA methyltransferase 9B (putative)
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 49126 bases
Position: chr16:59317699-59366824
Accession: 1304810
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000015062	Methyltransf_31	PF13847.6	1.6e-10	1	1
ENSRNOP00000015062	Methyltransf_8	PF05148.15	6.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000015062	-	2491	XM_006253222	ENSRNOP00000015062	446 (aa)	XP_006253284	D3ZQW3

Gene Model

Click here to download ENSRNOG00000011253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000011253's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000011253	Trmt9b	100	74.229	ENSG00000250305	TRMT9B	100	90.741	Homo_sapiens
ENSRNOG00000011253	Trmt9b	99	71.744	ENSAMEG00000007166	TRMT9B	99	71.744	Ailuropoda_melanoleuca
ENSRNOG00000011253	Trmt9b	99	55.870	ENSAPLG00000009756	TRMT9B	99	55.870	Anas_platyrhynchos
ENSRNOG00000011253	Trmt9b	100	73.568	ENSANAG00000021322	TRMT9B	100	73.568	Aotus_nancymaae
ENSRNOG00000011253	Trmt9b	100	69.383	ENSBTAG00000008950	TRMT9B	100	69.383	Bos_taurus
ENSRNOG00000011253	Trmt9b	100	73.789	ENSCJAG00000012066	TRMT9B	100	73.789	Callithrix_jacchus
ENSRNOG00000011253	Trmt9b	100	71.366	ENSCAFG00000006759	TRMT9B	100	71.366	Canis_familiaris
ENSRNOG00000011253	Trmt9b	100	69.316	ENSCHIG00000025183	TRMT9B	100	69.316	Capra_hircus
ENSRNOG00000011253	Trmt9b	100	73.904	ENSTSYG00000029308	TRMT9B	100	73.904	Carlito_syrichta
ENSRNOG00000011253	Trmt9b	99	68.584	ENSCPOG00000032099	TRMT9B	99	68.584	Cavia_porcellus
ENSRNOG00000011253	Trmt9b	100	73.568	ENSCCAG00000032783	TRMT9B	100	73.568	Cebus_capucinus
ENSRNOG00000011253	Trmt9b	100	73.523	ENSCATG00000037514	TRMT9B	100	73.523	Cercocebus_atys
ENSRNOG00000011253	Trmt9b	99	70.337	ENSCLAG00000000634	TRMT9B	99	70.337	Chinchilla_lanigera
ENSRNOG00000011253	Trmt9b	100	73.085	ENSCSAG00000016833	TRMT9B	100	73.085	Chlorocebus_sabaeus
ENSRNOG00000011253	Trmt9b	99	59.778	ENSCPBG00000025129	TRMT9B	97	59.778	Chrysemys_picta_bellii
ENSRNOG00000011253	Trmt9b	88	71.358	ENSCANG00000025271	TRMT9B	100	71.358	Colobus_angolensis_palliatus
ENSRNOG00000011253	Trmt9b	100	86.577	ENSCGRG00001019764	Trmt9b	100	86.577	Cricetulus_griseus_chok1gshd
ENSRNOG00000011253	Trmt9b	100	86.577	ENSCGRG00000012855	Trmt9b	100	86.577	Cricetulus_griseus_crigri
ENSRNOG00000011253	Trmt9b	100	65.859	ENSDNOG00000000297	TRMT9B	100	65.859	Dasypus_novemcinctus
ENSRNOG00000011253	Trmt9b	100	72.747	ENSEASG00005017014	TRMT9B	100	72.747	Equus_asinus_asinus
ENSRNOG00000011253	Trmt9b	100	71.744	ENSECAG00000013811	TRMT9B	100	71.744	Equus_caballus
ENSRNOG00000011253	Trmt9b	100	71.145	ENSFCAG00000041381	TRMT9B	100	71.145	Felis_catus
ENSRNOG00000011253	Trmt9b	99	56.494	ENSFALG00000003704	TRMT9B	98	56.494	Ficedula_albicollis
ENSRNOG00000011253	Trmt9b	99	69.556	ENSFDAG00000020217	TRMT9B	99	69.556	Fukomys_damarensis
ENSRNOG00000011253	Trmt9b	99	56.236	ENSGALG00000042726	TRMT9B	99	56.236	Gallus_gallus
ENSRNOG00000011253	Trmt9b	99	58.628	ENSGAGG00000006042	TRMT9B	99	58.628	Gopherus_agassizii
ENSRNOG00000011253	Trmt9b	100	74.449	ENSGGOG00000037983	TRMT9B	100	74.449	Gorilla_gorilla
ENSRNOG00000011253	Trmt9b	99	72.606	ENSHGLG00000004927	TRMT9B	99	72.606	Heterocephalus_glaber_female
ENSRNOG00000011253	Trmt9b	99	72.829	ENSHGLG00100001579	TRMT9B	99	72.829	Heterocephalus_glaber_male
ENSRNOG00000011253	Trmt9b	99	54.565	ENSLACG00000009737	TRMT9B	99	54.565	Latimeria_chalumnae
ENSRNOG00000011253	Trmt9b	100	73.085	ENSMFAG00000043419	TRMT9B	100	73.085	Macaca_fascicularis
ENSRNOG00000011253	Trmt9b	100	73.085	ENSMMUG00000043856	TRMT9B	100	73.085	Macaca_mulatta
ENSRNOG00000011253	Trmt9b	100	73.085	ENSMNEG00000037430	TRMT9B	100	73.085	Macaca_nemestrina
ENSRNOG00000011253	Trmt9b	100	73.348	ENSMLEG00000037379	TRMT9B	100	73.348	Mandrillus_leucophaeus
ENSRNOG00000011253	Trmt9b	99	56.893	ENSMGAG00000011654	TRMT9B	99	56.893	Meleagris_gallopavo
ENSRNOG00000011253	Trmt9b	100	83.669	ENSMAUG00000017514	Trmt9b	100	83.669	Mesocricetus_auratus
ENSRNOG00000011253	Trmt9b	99	70.796	ENSMICG00000012942	TRMT9B	99	70.796	Microcebus_murinus
ENSRNOG00000011253	Trmt9b	99	83.371	ENSMOCG00000013997	Trmt9b	100	83.371	Microtus_ochrogaster
ENSRNOG00000011253	Trmt9b	100	89.933	MGP_CAROLIEiJ_G0030985	Trmt9b	100	89.933	Mus_caroli
ENSRNOG00000011253	Trmt9b	100	89.262	ENSMUSG00000039620	Trmt9b	100	89.262	Mus_musculus
ENSRNOG00000011253	Trmt9b	100	89.262	MGP_PahariEiJ_G0021453	Trmt9b	100	89.262	Mus_pahari
ENSRNOG00000011253	Trmt9b	100	89.485	MGP_SPRETEiJ_G0032101	Trmt9b	100	89.485	Mus_spretus
ENSRNOG00000011253	Trmt9b	100	71.965	ENSMPUG00000011528	TRMT9B	100	71.965	Mustela_putorius_furo
ENSRNOG00000011253	Trmt9b	100	72.467	ENSMLUG00000013029	TRMT9B	100	72.467	Myotis_lucifugus
ENSRNOG00000011253	Trmt9b	100	74.229	ENSNLEG00000031644	TRMT9B	100	74.229	Nomascus_leucogenys
ENSRNOG00000011253	Trmt9b	99	70.379	ENSODEG00000004422	TRMT9B	99	70.379	Octodon_degus
ENSRNOG00000011253	Trmt9b	69	52.548	ENSOANG00000002169	-	96	51.724	Ornithorhynchus_anatinus
ENSRNOG00000011253	Trmt9b	100	69.451	ENSOCUG00000024898	TRMT9B	100	69.451	Oryctolagus_cuniculus
ENSRNOG00000011253	Trmt9b	99	68.805	ENSOGAG00000012709	TRMT9B	99	68.805	Otolemur_garnettii
ENSRNOG00000011253	Trmt9b	99	70.288	ENSOARG00000009832	TRMT9B	99	70.288	Ovis_aries
ENSRNOG00000011253	Trmt9b	100	74.009	ENSPPAG00000030027	TRMT9B	100	74.009	Pan_paniscus
ENSRNOG00000011253	Trmt9b	100	71.366	ENSPPRG00000012143	TRMT9B	100	71.366	Panthera_pardus
ENSRNOG00000011253	Trmt9b	100	71.586	ENSPTIG00000001444	TRMT9B	100	71.586	Panthera_tigris_altaica
ENSRNOG00000011253	Trmt9b	100	74.449	ENSPTRG00000041473	TRMT9B	100	74.449	Pan_troglodytes
ENSRNOG00000011253	Trmt9b	100	73.085	ENSPANG00000008717	TRMT9B	100	73.085	Papio_anubis
ENSRNOG00000011253	Trmt9b	99	85.169	ENSPEMG00000021287	Trmt9b	100	85.169	Peromyscus_maniculatus_bairdii
ENSRNOG00000011253	Trmt9b	100	71.209	ENSPCOG00000020130	TRMT9B	100	71.209	Propithecus_coquereli
ENSRNOG00000011253	Trmt9b	100	73.304	ENSRBIG00000040588	TRMT9B	100	73.304	Rhinopithecus_bieti
ENSRNOG00000011253	Trmt9b	100	72.907	ENSRROG00000005726	TRMT9B	100	72.907	Rhinopithecus_roxellana
ENSRNOG00000011253	Trmt9b	100	73.128	ENSSBOG00000029215	TRMT9B	100	73.128	Saimiri_boliviensis_boliviensis
ENSRNOG00000011253	Trmt9b	98	51.225	ENSSHAG00000001652	TRMT9B	98	51.225	Sarcophilus_harrisii
ENSRNOG00000011253	Trmt9b	100	69.163	ENSSSCG00000006969	TRMT9B	100	69.163	Sus_scrofa
ENSRNOG00000011253	Trmt9b	99	55.459	ENSTGUG00000007372	TRMT9B	99	55.459	Taeniopygia_guttata
ENSRNOG00000011253	Trmt9b	100	71.806	ENSUMAG00000020549	TRMT9B	100	71.806	Ursus_maritimus
ENSRNOG00000011253	Trmt9b	100	70.485	ENSVVUG00000019651	TRMT9B	100	70.485	Vulpes_vulpes
ENSRNOG00000011253	Trmt9b	99	51.293	ENSXETG00000005622	kiaa1456l	99	51.293	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	21873635.	IBA	Function
GO:0002098	tRNA wobble uridine modification	21873635.	IBA	Process
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0008175	tRNA methyltransferase activity	-	ISO	Function
GO:0016300	tRNA (uracil) methyltransferase activity	21873635.	IBA	Function
GO:0016706	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	21873635.	IBA	Function
GO:0030488	tRNA methylation	-	IEA	Process
GO:0055114	oxidation-reduction process	-	IEA	Process