EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000011489 (Gene tree)
Gene ID: 362840
Gene Symbol: R3hdm4
Alias: RGD1307067
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 7119 bases
Position: chr7:12611468-12618586
Accession: 1307067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000015869	R3H	PF01424.22	3.8e-07	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000093610	-	406	-	-	- (aa)	-	-
ENSRNOT00000015869	-	1785	-	ENSRNOP00000015869	263 (aa)	-	B1WC19

Gene Model

Click here to download ENSRNOG00000011489's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000011489's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000011489	R3hdm4	100	84.644	ENSG00000198858	R3HDM4	99	84.270	Homo_sapiens
ENSRNOG00000011489	R3hdm4	92	85.124	ENSAMEG00000003001	R3HDM4	99	84.711	Ailuropoda_melanoleuca
ENSRNOG00000011489	R3hdm4	89	55.319	ENSACIG00000004672	r3hdm4	91	54.468	Amphilophus_citrinellus
ENSRNOG00000011489	R3hdm4	88	54.043	ENSATEG00000015913	r3hdm4	91	53.617	Anabas_testudineus
ENSRNOG00000011489	R3hdm4	92	87.603	ENSANAG00000029748	R3HDM4	99	87.190	Aotus_nancymaae
ENSRNOG00000011489	R3hdm4	97	82.812	ENSBTAG00000046406	R3HDM4	99	80.812	Bos_taurus
ENSRNOG00000011489	R3hdm4	94	86.290	ENSCJAG00000020114	R3HDM4	93	85.887	Callithrix_jacchus
ENSRNOG00000011489	R3hdm4	100	81.550	ENSCAFG00000019665	R3HDM4	99	81.181	Canis_familiaris
ENSRNOG00000011489	R3hdm4	100	81.181	ENSCAFG00020016880	R3HDM4	99	80.812	Canis_lupus_dingo
ENSRNOG00000011489	R3hdm4	100	82.657	ENSCHIG00000020110	R3HDM4	99	82.288	Capra_hircus
ENSRNOG00000011489	R3hdm4	95	84.462	ENSCCAG00000019955	R3HDM4	91	84.064	Cebus_capucinus
ENSRNOG00000011489	R3hdm4	100	83.643	ENSCATG00000037269	R3HDM4	99	84.015	Cercocebus_atys
ENSRNOG00000011489	R3hdm4	92	87.603	ENSCLAG00000007094	R3HDM4	99	87.190	Chinchilla_lanigera
ENSRNOG00000011489	R3hdm4	100	85.019	ENSCSAG00000012574	R3HDM4	99	84.644	Chlorocebus_sabaeus
ENSRNOG00000011489	R3hdm4	99	65.399	ENSCPBG00000009805	R3HDM4	99	65.019	Chrysemys_picta_bellii
ENSRNOG00000011489	R3hdm4	96	84.646	ENSCANG00000040439	R3HDM4	89	84.252	Colobus_angolensis_palliatus
ENSRNOG00000011489	R3hdm4	100	92.453	ENSCGRG00001021650	R3hdm4	100	93.208	Cricetulus_griseus_chok1gshd
ENSRNOG00000011489	R3hdm4	100	92.453	ENSCGRG00000013169	R3hdm4	100	93.208	Cricetulus_griseus_crigri
ENSRNOG00000011489	R3hdm4	89	52.542	ENSCSEG00000018211	r3hdm4	91	51.489	Cynoglossus_semilaevis
ENSRNOG00000011489	R3hdm4	89	54.622	ENSCVAG00000017127	r3hdm4	91	54.852	Cyprinodon_variegatus
ENSRNOG00000011489	R3hdm4	92	88.525	ENSDORG00000006605	R3hdm4	99	88.525	Dipodomys_ordii
ENSRNOG00000011489	R3hdm4	95	86.166	ENSEASG00005021556	R3HDM4	88	88.017	Equus_asinus_asinus
ENSRNOG00000011489	R3hdm4	92	88.115	ENSECAG00000000003	R3HDM4	99	84.444	Equus_caballus
ENSRNOG00000011489	R3hdm4	100	82.528	ENSFCAG00000042437	R3HDM4	99	82.156	Felis_catus
ENSRNOG00000011489	R3hdm4	91	67.220	ENSFALG00000013938	R3HDM4	98	67.647	Ficedula_albicollis
ENSRNOG00000011489	R3hdm4	92	86.008	ENSFDAG00000017040	R3HDM4	99	85.597	Fukomys_damarensis
ENSRNOG00000011489	R3hdm4	89	55.508	ENSFHEG00000017636	r3hdm4	91	54.043	Fundulus_heteroclitus
ENSRNOG00000011489	R3hdm4	89	52.790	ENSGMOG00000001231	r3hdm4	95	53.419	Gadus_morhua
ENSRNOG00000011489	R3hdm4	90	65.833	ENSGALG00000001998	R3HDM4	90	65.417	Gallus_gallus
ENSRNOG00000011489	R3hdm4	99	53.030	ENSGAFG00000004173	r3hdm4	99	52.830	Gambusia_affinis
ENSRNOG00000011489	R3hdm4	92	67.490	ENSGAGG00000019698	R3HDM4	92	67.078	Gopherus_agassizii
ENSRNOG00000011489	R3hdm4	99	83.969	ENSGGOG00000008040	R3HDM4	99	87.190	Gorilla_gorilla
ENSRNOG00000011489	R3hdm4	89	54.894	ENSHBUG00000014810	r3hdm4	91	55.319	Haplochromis_burtoni
ENSRNOG00000011489	R3hdm4	100	82.463	ENSHGLG00000016194	R3HDM4	99	82.090	Heterocephalus_glaber_female
ENSRNOG00000011489	R3hdm4	89	54.701	ENSHCOG00000008422	r3hdm4	91	54.468	Hippocampus_comes
ENSRNOG00000011489	R3hdm4	89	54.274	ENSIPUG00000006716	r3hdm4	91	53.191	Ictalurus_punctatus
ENSRNOG00000011489	R3hdm4	92	84.298	ENSSTOG00000023015	R3HDM4	99	85.124	Ictidomys_tridecemlineatus
ENSRNOG00000011489	R3hdm4	100	85.821	ENSJJAG00000012475	R3hdm4	100	85.075	Jaculus_jaculus
ENSRNOG00000011489	R3hdm4	89	55.319	ENSKMAG00000005853	r3hdm4	91	54.468	Kryptolebias_marmoratus
ENSRNOG00000011489	R3hdm4	89	53.846	ENSLBEG00000000730	r3hdm4	91	53.586	Labrus_bergylta
ENSRNOG00000011489	R3hdm4	95	58.103	ENSLACG00000016445	R3HDM4	93	59.336	Latimeria_chalumnae
ENSRNOG00000011489	R3hdm4	89	58.403	ENSLOCG00000002423	r3hdm4	99	55.056	Lepisosteus_oculatus
ENSRNOG00000011489	R3hdm4	97	82.101	ENSLAFG00000017796	R3HDM4	99	81.712	Loxodonta_africana
ENSRNOG00000011489	R3hdm4	100	85.019	ENSMFAG00000044131	R3HDM4	99	84.644	Macaca_fascicularis
ENSRNOG00000011489	R3hdm4	100	80.000	ENSMMUG00000009682	R3HDM4	99	79.623	Macaca_mulatta
ENSRNOG00000011489	R3hdm4	92	87.603	ENSMNEG00000044115	R3HDM4	98	87.190	Macaca_nemestrina
ENSRNOG00000011489	R3hdm4	96	82.812	ENSMLEG00000035693	R3HDM4	94	83.203	Mandrillus_leucophaeus
ENSRNOG00000011489	R3hdm4	77	56.373	ENSMAMG00000005652	r3hdm4	82	56.373	Mastacembelus_armatus
ENSRNOG00000011489	R3hdm4	100	90.943	ENSMAUG00000010611	R3hdm4	100	91.698	Mesocricetus_auratus
ENSRNOG00000011489	R3hdm4	100	84.015	ENSMICG00000010124	R3HDM4	99	83.643	Microcebus_murinus
ENSRNOG00000011489	R3hdm4	100	92.776	ENSMOCG00000002646	R3hdm4	100	92.776	Microtus_ochrogaster
ENSRNOG00000011489	R3hdm4	89	54.008	ENSMMOG00000008253	r3hdm4	91	53.586	Mola_mola
ENSRNOG00000011489	R3hdm4	87	65.801	ENSMODG00000005698	R3HDM4	99	65.368	Monodelphis_domestica
ENSRNOG00000011489	R3hdm4	89	54.894	ENSMALG00000018856	r3hdm4	90	54.043	Monopterus_albus
ENSRNOG00000011489	R3hdm4	100	95.437	MGP_CAROLIEiJ_G0015551	R3hdm4	100	95.437	Mus_caroli
ENSRNOG00000011489	R3hdm4	100	95.817	ENSMUSG00000035781	R3hdm4	100	95.817	Mus_musculus
ENSRNOG00000011489	R3hdm4	100	95.437	MGP_PahariEiJ_G0030964	R3hdm4	100	95.437	Mus_pahari
ENSRNOG00000011489	R3hdm4	100	95.437	MGP_SPRETEiJ_G0016369	-	84	95.437	Mus_spretus
ENSRNOG00000011489	R3hdm4	97	83.333	ENSMPUG00000009394	R3HDM4	96	82.946	Mustela_putorius_furo
ENSRNOG00000011489	R3hdm4	89	54.468	ENSNBRG00000004438	r3hdm4	91	54.894	Neolamprologus_brichardi
ENSRNOG00000011489	R3hdm4	86	86.147	ENSNLEG00000001022	R3HDM4	100	83.983	Nomascus_leucogenys
ENSRNOG00000011489	R3hdm4	89	64.831	ENSMEUG00000011020	R3HDM4	98	63.559	Notamacropus_eugenii
ENSRNOG00000011489	R3hdm4	100	83.582	ENSODEG00000011745	R3HDM4	99	83.209	Octodon_degus
ENSRNOG00000011489	R3hdm4	89	54.894	ENSONIG00000012675	r3hdm4	84	55.319	Oreochromis_niloticus
ENSRNOG00000011489	R3hdm4	89	55.508	ENSOMEG00000003005	r3hdm4	91	54.043	Oryzias_melastigma
ENSRNOG00000011489	R3hdm4	99	82.510	ENSOGAG00000025656	R3HDM4	99	82.510	Otolemur_garnettii
ENSRNOG00000011489	R3hdm4	92	86.777	ENSOARG00000009945	R3HDM4	99	86.364	Ovis_aries
ENSRNOG00000011489	R3hdm4	99	84.351	ENSPPAG00000042371	R3HDM4	99	87.603	Pan_paniscus
ENSRNOG00000011489	R3hdm4	100	85.019	ENSPANG00000015203	R3HDM4	99	84.644	Papio_anubis
ENSRNOG00000011489	R3hdm4	86	55.895	ENSPKIG00000007421	r3hdm4	88	53.680	Paramormyrops_kingsleyae
ENSRNOG00000011489	R3hdm4	89	52.564	ENSPMGG00000020467	r3hdm4	90	52.340	Periophthalmus_magnuspinnatus
ENSRNOG00000011489	R3hdm4	92	95.021	ENSPEMG00000008365	Tmem259	99	95.021	Peromyscus_maniculatus_bairdii
ENSRNOG00000011489	R3hdm4	89	55.508	ENSPFOG00000003199	r3hdm4	91	54.430	Poecilia_formosa
ENSRNOG00000011489	R3hdm4	89	55.508	ENSPMEG00000014183	r3hdm4	91	54.468	Poecilia_mexicana
ENSRNOG00000011489	R3hdm4	99	53.030	ENSPREG00000010709	r3hdm4	99	52.075	Poecilia_reticulata
ENSRNOG00000011489	R3hdm4	100	82.772	ENSPPYG00000009297	R3HDM4	99	82.397	Pongo_abelii
ENSRNOG00000011489	R3hdm4	57	84.768	ENSPCAG00000010997	R3HDM4	55	81.457	Procavia_capensis
ENSRNOG00000011489	R3hdm4	100	82.900	ENSPCOG00000016785	R3HDM4	99	82.528	Propithecus_coquereli
ENSRNOG00000011489	R3hdm4	89	54.894	ENSPNYG00000017489	r3hdm4	91	55.319	Pundamilia_nyererei
ENSRNOG00000011489	R3hdm4	92	88.430	ENSRROG00000028842	R3HDM4	90	88.017	Rhinopithecus_roxellana
ENSRNOG00000011489	R3hdm4	95	82.745	ENSSBOG00000019298	R3HDM4	74	83.333	Saimiri_boliviensis_boliviensis
ENSRNOG00000011489	R3hdm4	55	69.655	ENSSHAG00000003036	-	99	68.966	Sarcophilus_harrisii
ENSRNOG00000011489	R3hdm4	89	53.191	ENSSFOG00015020574	r3hdm4	86	51.915	Scleropages_formosus
ENSRNOG00000011489	R3hdm4	89	54.894	ENSSMAG00000021090	r3hdm4	67	54.894	Scophthalmus_maximus
ENSRNOG00000011489	R3hdm4	89	56.170	ENSSDUG00000008488	r3hdm4	91	55.745	Seriola_dumerili
ENSRNOG00000011489	R3hdm4	89	56.170	ENSSLDG00000025328	r3hdm4	91	55.745	Seriola_lalandi_dorsalis
ENSRNOG00000011489	R3hdm4	96	64.567	ENSSPUG00000005434	R3HDM4	99	64.173	Sphenodon_punctatus
ENSRNOG00000011489	R3hdm4	89	53.165	ENSSPAG00000002562	r3hdm4	90	52.743	Stegastes_partitus
ENSRNOG00000011489	R3hdm4	100	83.026	ENSSSCG00000013419	R3HDM4	99	82.657	Sus_scrofa
ENSRNOG00000011489	R3hdm4	78	63.158	ENSTGUG00000000663	R3HDM4	100	61.722	Taeniopygia_guttata
ENSRNOG00000011489	R3hdm4	92	82.158	ENSTTRG00000001470	R3HDM4	99	81.328	Tursiops_truncatus
ENSRNOG00000011489	R3hdm4	100	71.587	ENSUAMG00000005751	R3HDM4	99	86.036	Ursus_americanus
ENSRNOG00000011489	R3hdm4	100	81.919	ENSVVUG00000022685	R3HDM4	99	81.550	Vulpes_vulpes
ENSRNOG00000011489	R3hdm4	89	46.835	ENSXETG00000033624	R3HDM4	91	46.581	Xenopus_tropicalis
ENSRNOG00000011489	R3hdm4	99	52.830	ENSXCOG00000005127	r3hdm4	99	51.894	Xiphophorus_couchianus
ENSRNOG00000011489	R3hdm4	99	53.030	ENSXMAG00000022875	r3hdm4	99	52.075	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function