EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000011508 (Gene tree)
Gene ID
296864
Gene Symbol
Zc3h12b
Alias
LOC296864|RGD1560891
Full Name
zinc finger CCCH-type containing 12B
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Plus strand
Length
34609 bases
Position
chrX:65040104-65074712
Accession
1560891
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000045289RNase_Zc3h12aPF11977.87.7e-6411
ENSRNOP00000071926RNase_Zc3h12aPF11977.82.9e-5611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000081354-1311-ENSRNOP00000071926327 (aa)-A0A0G2K1P5
ENSRNOT00000077012-288--- (aa)--
ENSRNOT00000076903-1294--- (aa)--
ENSRNOT00000044006-2832XM_002730248ENSRNOP00000045289835 (aa)XP_002730294D4ACQ4
Gene Model
Click here to download ENSRNOG00000011508's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000011508's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSRNOG00000011508Zc3h12b6858.952ENSRNOG00000016041Zc3h12d5660.738
ENSRNOG00000011508Zc3h12b9960.000ENSRNOG00000012470Zc3h12c9352.398
ENSRNOG00000011508Zc3h12b7661.111ENSRNOG00000009131Zc3h12a5563.142
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000011508Zc3h12b10091.489ENSG00000102053ZC3H12B10090.562Homo_sapiens
ENSRNOG00000011508Zc3h12b9966.279ENSAPOG00000001738zc3h12b9966.784Acanthochromis_polyacanthus
ENSRNOG00000011508Zc3h12b7689.748ENSAMEG00000006955ZC3H12B10089.748Ailuropoda_melanoleuca
ENSRNOG00000011508Zc3h12b9966.588ENSACIG00000009787zc3h12b9967.337Amphilophus_citrinellus
ENSRNOG00000011508Zc3h12b7659.712ENSACIG00000005689-7368.936Amphilophus_citrinellus
ENSRNOG00000011508Zc3h12b9966.279ENSAOCG00000010094zc3h12b9966.667Amphiprion_ocellaris
ENSRNOG00000011508Zc3h12b9966.395ENSAPEG00000007479zc3h12b9966.784Amphiprion_percula
ENSRNOG00000011508Zc3h12b9169.398ENSATEG00000011175zc3h12b9965.731Anabas_testudineus
ENSRNOG00000011508Zc3h12b6887.281ENSAPLG00000003874ZC3H12B10089.761Anas_platyrhynchos
ENSRNOG00000011508Zc3h12b10073.310ENSACAG00000013582ZC3H12B10073.734Anolis_carolinensis
ENSRNOG00000011508Zc3h12b10091.185ENSANAG00000010296ZC3H12B10090.681Aotus_nancymaae
ENSRNOG00000011508Zc3h12b9965.768ENSACLG00000007669zc3h12b9966.238Astatotilapia_calliptera
ENSRNOG00000011508Zc3h12b7757.480ENSAMXG00000038308-8645.538Astyanax_mexicanus
ENSRNOG00000011508Zc3h12b9165.777ENSAMXG00000011328zc3h12b8663.781Astyanax_mexicanus
ENSRNOG00000011508Zc3h12b7762.205ENSAMXG00000005320-9145.006Astyanax_mexicanus
ENSRNOG00000011508Zc3h12b10088.146ENSBTAG00000002206ZC3H12B9988.517Bos_taurus
ENSRNOG00000011508Zc3h12b10090.578ENSCJAG00000001427ZC3H12B10090.442Callithrix_jacchus
ENSRNOG00000011508Zc3h12b10089.970ENSCAFG00000031307ZC3H12B10088.411Canis_familiaris
ENSRNOG00000011508Zc3h12b10089.970ENSCAFG00020017995ZC3H12B10088.411Canis_lupus_dingo
ENSRNOG00000011508Zc3h12b7089.966ENSCHIG00000011723ZC3H12B9889.966Capra_hircus
ENSRNOG00000011508Zc3h12b10090.323ENSTSYG00000011302ZC3H12B10090.323Carlito_syrichta
ENSRNOG00000011508Zc3h12b7385.761ENSCAPG00000000650ZC3H12B10085.761Cavia_aperea
ENSRNOG00000011508Zc3h12b10090.881ENSCCAG00000030171ZC3H12B10090.562Cebus_capucinus
ENSRNOG00000011508Zc3h12b10091.793ENSCATG00000044845ZC3H12B10090.800Cercocebus_atys
ENSRNOG00000011508Zc3h12b10090.214ENSCLAG00000003600ZC3H12B10089.581Chinchilla_lanigera
ENSRNOG00000011508Zc3h12b10091.489ENSCSAG00000011955-9891.489Chlorocebus_sabaeus
ENSRNOG00000011508Zc3h12b10076.241ENSCPBG00000006983ZC3H12B10077.305Chrysemys_picta_bellii
ENSRNOG00000011508Zc3h12b10091.185ENSCANG00000006746ZC3H12B10090.562Colobus_angolensis_palliatus
ENSRNOG00000011508Zc3h12b10095.689ENSCGRG00001018643Zc3h12b10095.689Cricetulus_griseus_chok1gshd
ENSRNOG00000011508Zc3h12b10095.689ENSCGRG00000015623Zc3h12b10095.689Cricetulus_griseus_crigri
ENSRNOG00000011508Zc3h12b9170.000ENSCSEG00000013686zc3h12b9966.548Cynoglossus_semilaevis
ENSRNOG00000011508Zc3h12b9965.814ENSCVAG00000010473zc3h12b9966.318Cyprinodon_variegatus
ENSRNOG00000011508Zc3h12b9166.091ENSDARG00000062463zc3h12b9965.343Danio_rerio
ENSRNOG00000011508Zc3h12b10088.720ENSDNOG00000038439ZC3H12B10083.732Dasypus_novemcinctus
ENSRNOG00000011508Zc3h12b10090.854ENSDORG00000024832Zc3h12b10090.800Dipodomys_ordii
ENSRNOG00000011508Zc3h12b9971.463ENSETEG00000012095ZC3H12B10071.463Echinops_telfairi
ENSRNOG00000011508Zc3h12b10086.516ENSEASG00005006995ZC3H12B10086.516Equus_asinus_asinus
ENSRNOG00000011508Zc3h12b10091.515ENSECAG00000020993ZC3H12B10090.811Equus_caballus
ENSRNOG00000011508Zc3h12b9762.069ENSEEUG00000007148-5490.984Erinaceus_europaeus
ENSRNOG00000011508Zc3h12b9966.705ENSELUG00000010689zc3h12b8866.897Esox_lucius
ENSRNOG00000011508Zc3h12b10087.234ENSFCAG00000032299ZC3H12B9987.799Felis_catus
ENSRNOG00000011508Zc3h12b10072.107ENSFALG00000004293ZC3H12B9477.975Ficedula_albicollis
ENSRNOG00000011508Zc3h12b10089.581ENSFDAG00000014258ZC3H12B10089.581Fukomys_damarensis
ENSRNOG00000011508Zc3h12b9965.429ENSFHEG00000002391zc3h12b9965.429Fundulus_heteroclitus
ENSRNOG00000011508Zc3h12b6968.776ENSFHEG00000014717-6270.042Fundulus_heteroclitus
ENSRNOG00000011508Zc3h12b10075.768ENSGALG00000039391ZC3H12B10076.714Gallus_gallus
ENSRNOG00000011508Zc3h12b9169.338ENSGAFG00000006871zc3h12b9964.672Gambusia_affinis
ENSRNOG00000011508Zc3h12b8361.348ENSGAFG00000004701-5173.941Gambusia_affinis
ENSRNOG00000011508Zc3h12b9164.637ENSGACG00000020334zc3h12b9762.945Gasterosteus_aculeatus
ENSRNOG00000011508Zc3h12b10076.241ENSGAGG00000005569ZC3H12B10077.187Gopherus_agassizii
ENSRNOG00000011508Zc3h12b10091.185ENSGGOG00000024638ZC3H12B10090.323Gorilla_gorilla
ENSRNOG00000011508Zc3h12b9965.885ENSHBUG00000000645zc3h12b9966.355Haplochromis_burtoni
ENSRNOG00000011508Zc3h12b6867.982ENSHBUG00000003376-9158.667Haplochromis_burtoni
ENSRNOG00000011508Zc3h12b10089.701ENSHGLG00000003107ZC3H12B10089.701Heterocephalus_glaber_female
ENSRNOG00000011508Zc3h12b10089.701ENSHGLG00100010721ZC3H12B10089.701Heterocephalus_glaber_male
ENSRNOG00000011508Zc3h12b9965.680ENSHCOG00000008487zc3h12b9965.680Hippocampus_comes
ENSRNOG00000011508Zc3h12b6774.091ENSHCOG00000017425-7661.379Hippocampus_comes
ENSRNOG00000011508Zc3h12b9165.483ENSIPUG00000016745zc3h12b8764.261Ictalurus_punctatus
ENSRNOG00000011508Zc3h12b7768.992ENSIPUG00000014830-8748.379Ictalurus_punctatus
ENSRNOG00000011508Zc3h12b10091.507ENSSTOG00000020962ZC3H12B10091.507Ictidomys_tridecemlineatus
ENSRNOG00000011508Zc3h12b10089.341ENSJJAG00000015755Zc3h12b10089.341Jaculus_jaculus
ENSRNOG00000011508Zc3h12b9964.871ENSKMAG00000004921zc3h12b9965.614Kryptolebias_marmoratus
ENSRNOG00000011508Zc3h12b9369.975ENSLBEG00000006448zc3h12b9966.978Labrus_bergylta
ENSRNOG00000011508Zc3h12b9274.682ENSLACG00000014526ZC3H12B10071.244Latimeria_chalumnae
ENSRNOG00000011508Zc3h12b10071.108ENSLOCG00000014631zc3h12b8771.108Lepisosteus_oculatus
ENSRNOG00000011508Zc3h12b7771.756ENSLOCG00000010717-8553.720Lepisosteus_oculatus
ENSRNOG00000011508Zc3h12b10088.544ENSLAFG00000014891ZC3H12B10088.544Loxodonta_africana
ENSRNOG00000011508Zc3h12b10091.489ENSMFAG00000042237ZC3H12B10090.562Macaca_fascicularis
ENSRNOG00000011508Zc3h12b10091.793ENSMMUG00000012261ZC3H12B10090.681Macaca_mulatta
ENSRNOG00000011508Zc3h12b10091.793ENSMNEG00000043003ZC3H12B10090.681Macaca_nemestrina
ENSRNOG00000011508Zc3h12b10091.793ENSMLEG00000042630ZC3H12B10090.800Mandrillus_leucophaeus
ENSRNOG00000011508Zc3h12b9965.888ENSMAMG00000011770zc3h12b9966.550Mastacembelus_armatus
ENSRNOG00000011508Zc3h12b9965.768ENSMZEG00005007548zc3h12b9966.238Maylandia_zebra
ENSRNOG00000011508Zc3h12b10075.355ENSMGAG00000000759ZC3H12B9976.303Meleagris_gallopavo
ENSRNOG00000011508Zc3h12b10095.329ENSMAUG00000017800Zc3h12b10095.329Mesocricetus_auratus
ENSRNOG00000011508Zc3h12b10089.970ENSMICG00000010697ZC3H12B10089.845Microcebus_murinus
ENSRNOG00000011508Zc3h12b10095.090ENSMOCG00000000094Zc3h12b10095.090Microtus_ochrogaster
ENSRNOG00000011508Zc3h12b9271.063ENSMMOG00000008734zc3h12b9967.933Mola_mola
ENSRNOG00000011508Zc3h12b9972.500ENSMODG00000005206ZC3H12B9972.500Monodelphis_domestica
ENSRNOG00000011508Zc3h12b6771.101ENSMALG00000016807-8557.534Monopterus_albus
ENSRNOG00000011508Zc3h12b9963.807ENSMALG00000021153zc3h12b9963.807Monopterus_albus
ENSRNOG00000011508Zc3h12b10098.084ENSMUSG00000035045Zc3h12b10098.084Mus_musculus
ENSRNOG00000011508Zc3h12b10097.246MGP_PahariEiJ_G0031787Zc3h12b10097.246Mus_pahari
ENSRNOG00000011508Zc3h12b10098.084MGP_SPRETEiJ_G0034413Zc3h12b10098.084Mus_spretus
ENSRNOG00000011508Zc3h12b10087.575ENSMPUG00000001162ZC3H12B10087.575Mustela_putorius_furo
ENSRNOG00000011508Zc3h12b9989.170ENSMLUG00000013635ZC3H12B10089.170Myotis_lucifugus
ENSRNOG00000011508Zc3h12b9966.002ENSNBRG00000014889zc3h12b9966.316Neolamprologus_brichardi
ENSRNOG00000011508Zc3h12b10091.185ENSNLEG00000000383ZC3H12B10090.442Nomascus_leucogenys
ENSRNOG00000011508Zc3h12b9968.307ENSMEUG00000014075ZC3H12B10068.307Notamacropus_eugenii
ENSRNOG00000011508Zc3h12b9368.679ENSONIG00000012867zc3h12b9966.196Oreochromis_niloticus
ENSRNOG00000011508Zc3h12b10091.463ENSOCUG00000006130ZC3H12B10091.388Oryctolagus_cuniculus
ENSRNOG00000011508Zc3h12b10066.364ENSORLG00000009556zc3h12b9966.786Oryzias_latipes
ENSRNOG00000011508Zc3h12b6868.103ENSORLG00000009188-5672.403Oryzias_latipes
ENSRNOG00000011508Zc3h12b6868.103ENSORLG00020019033-8269.397Oryzias_latipes_hni
ENSRNOG00000011508Zc3h12b9966.157ENSORLG00020021793zc3h12b9966.157Oryzias_latipes_hni
ENSRNOG00000011508Zc3h12b6868.103ENSORLG00015020619-8768.966Oryzias_latipes_hsok
ENSRNOG00000011508Zc3h12b9966.275ENSORLG00015004818zc3h12b9966.275Oryzias_latipes_hsok
ENSRNOG00000011508Zc3h12b6870.588ENSOMEG00000018642-7770.588Oryzias_melastigma
ENSRNOG00000011508Zc3h12b9965.925ENSOMEG00000005768zc3h12b9966.393Oryzias_melastigma
ENSRNOG00000011508Zc3h12b10089.362ENSOGAG00000029439ZC3H12B10089.247Otolemur_garnettii
ENSRNOG00000011508Zc3h12b10088.292ENSOARG00000004959ZC3H12B10088.292Ovis_aries
ENSRNOG00000011508Zc3h12b10091.489ENSPPAG00000039530ZC3H12B10090.562Pan_paniscus
ENSRNOG00000011508Zc3h12b8086.736ENSPPRG00000004966-9986.736Panthera_pardus
ENSRNOG00000011508Zc3h12b7690.521ENSPTIG00000005571ZC3H12B10090.521Panthera_tigris_altaica
ENSRNOG00000011508Zc3h12b10091.489ENSPTRG00000021969ZC3H12B10090.562Pan_troglodytes
ENSRNOG00000011508Zc3h12b10091.793ENSPANG00000007944ZC3H12B10090.800Papio_anubis
ENSRNOG00000011508Zc3h12b9168.943ENSPKIG00000012946zc3h12b9965.636Paramormyrops_kingsleyae
ENSRNOG00000011508Zc3h12b7267.886ENSPKIG00000012595-8245.198Paramormyrops_kingsleyae
ENSRNOG00000011508Zc3h12b10066.512ENSPKIG00000019893ZC3H12B10066.860Paramormyrops_kingsleyae
ENSRNOG00000011508Zc3h12b10077.187ENSPSIG00000016853ZC3H12B10077.187Pelodiscus_sinensis
ENSRNOG00000011508Zc3h12b9169.728ENSPMGG00000006009zc3h12b9965.960Periophthalmus_magnuspinnatus
ENSRNOG00000011508Zc3h12b10072.118ENSPCIG00000020264ZC3H12B10072.118Phascolarctos_cinereus
ENSRNOG00000011508Zc3h12b9169.211ENSPFOG00000019365zc3h12b9965.505Poecilia_formosa
ENSRNOG00000011508Zc3h12b9169.377ENSPLAG00000011981zc3h12b9962.529Poecilia_latipinna
ENSRNOG00000011508Zc3h12b6968.776ENSPLAG00000011687-7870.386Poecilia_latipinna
ENSRNOG00000011508Zc3h12b9165.903ENSPMEG00000002552zc3h12b9962.485Poecilia_mexicana
ENSRNOG00000011508Zc3h12b9964.884ENSPREG00000020794zc3h12b9965.238Poecilia_reticulata
ENSRNOG00000011508Zc3h12b9982.324ENSPPYG00000020416ZC3H12B10082.324Pongo_abelii
ENSRNOG00000011508Zc3h12b9976.570ENSPCAG00000016422ZC3H12B10076.570Procavia_capensis
ENSRNOG00000011508Zc3h12b10090.692ENSPCOG00000020467ZC3H12B10090.692Propithecus_coquereli
ENSRNOG00000011508Zc3h12b9975.212ENSPVAG00000017352ZC3H12B10075.212Pteropus_vampyrus
ENSRNOG00000011508Zc3h12b9965.651ENSPNYG00000018012zc3h12b9966.121Pundamilia_nyererei
ENSRNOG00000011508Zc3h12b6876.682ENSPNYG00000015874-7976.682Pundamilia_nyererei
ENSRNOG00000011508Zc3h12b6768.889ENSPNYG00000007151-9355.280Pundamilia_nyererei
ENSRNOG00000011508Zc3h12b7981.154ENSPNAG00000002567zc3h12b9765.444Pygocentrus_nattereri
ENSRNOG00000011508Zc3h12b7769.685ENSPNAG00000017483-8750.132Pygocentrus_nattereri
ENSRNOG00000011508Zc3h12b10091.793ENSRBIG00000036402ZC3H12B10090.681Rhinopithecus_bieti
ENSRNOG00000011508Zc3h12b10091.793ENSRROG00000036004ZC3H12B10090.562Rhinopithecus_roxellana
ENSRNOG00000011508Zc3h12b10091.185ENSSBOG00000004095ZC3H12B10090.681Saimiri_boliviensis_boliviensis
ENSRNOG00000011508Zc3h12b10072.300ENSSHAG00000006530ZC3H12B10072.300Sarcophilus_harrisii
ENSRNOG00000011508Zc3h12b10067.330ENSSFOG00015012866ZC3H12B9966.667Scleropages_formosus
ENSRNOG00000011508Zc3h12b9172.423ENSSFOG00015008769zc3h12b9968.347Scleropages_formosus
ENSRNOG00000011508Zc3h12b9966.121ENSSMAG00000018309zc3h12b9966.628Scophthalmus_maximus
ENSRNOG00000011508Zc3h12b9966.904ENSSDUG00000014078zc3h12b9967.773Seriola_dumerili
ENSRNOG00000011508Zc3h12b9369.434ENSSLDG00000018895zc3h12b9967.018Seriola_lalandi_dorsalis
ENSRNOG00000011508Zc3h12b9965.738ENSSARG00000002292ZC3H12B10065.738Sorex_araneus
ENSRNOG00000011508Zc3h12b9275.871ENSSPUG00000014175ZC3H12B9974.505Sphenodon_punctatus
ENSRNOG00000011508Zc3h12b9966.279ENSSPAG00000022460zc3h12b9966.279Stegastes_partitus
ENSRNOG00000011508Zc3h12b10089.725ENSSSCG00000012367ZC3H12B10089.725Sus_scrofa
ENSRNOG00000011508Zc3h12b10075.887ENSTGUG00000002846ZC3H12B10076.359Taeniopygia_guttata
ENSRNOG00000011508Zc3h12b6770.130ENSTRUG00000015402-7464.595Takifugu_rubripes
ENSRNOG00000011508Zc3h12b9268.521ENSTRUG00000012186zc3h12b9868.521Takifugu_rubripes
ENSRNOG00000011508Zc3h12b9266.324ENSTNIG00000011828zc3h12b9964.112Tetraodon_nigroviridis
ENSRNOG00000011508Zc3h12b9378.718ENSTBEG00000011540ZC3H12B10078.718Tupaia_belangeri
ENSRNOG00000011508Zc3h12b8988.780ENSTTRG00000007468ZC3H12B9088.780Tursiops_truncatus
ENSRNOG00000011508Zc3h12b10089.058ENSUAMG00000005098ZC3H12B10088.411Ursus_americanus
ENSRNOG00000011508Zc3h12b10089.058ENSUMAG00000017054ZC3H12B10088.411Ursus_maritimus
ENSRNOG00000011508Zc3h12b9979.298ENSVPAG00000009070ZC3H12B10079.298Vicugna_pacos
ENSRNOG00000011508Zc3h12b10090.274ENSVVUG00000022686ZC3H12B10088.411Vulpes_vulpes
ENSRNOG00000011508Zc3h12b9967.371ENSXETG00000017794zc3h12b9967.371Xenopus_tropicalis
ENSRNOG00000011508Zc3h12b9965.416ENSXCOG00000006151zc3h12b9965.998Xiphophorus_couchianus
ENSRNOG00000011508Zc3h12b6972.566ENSXCOG00000007996-8669.658Xiphophorus_couchianus
ENSRNOG00000011508Zc3h12b9964.672ENSXMAG00000018548zc3h12b9965.238Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0046872metal ion binding-IEAFunction

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