EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000011584 (Gene tree)
Gene ID: 292810
Gene Symbol: Gpatch1
Alias: Gpatc1|LOC292810
Full Name: G patch domain containing 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 48937 bases
Position: chr1:91529112-91578048
Accession: 1308935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000015791	DUF1604	PF07713.13	4e-36	1	1
ENSRNOP00000015791	G-patch	PF01585.23	5.5e-07	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000015791	-	3083	XM_017588915	ENSRNOP00000015791	930 (aa)	XP_017444404	F1LU70

Gene Model

Click here to download ENSRNOG00000011584's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000011584's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000011584	Gpatch1	100	83.494	ENSG00000076650	GPATCH1	100	80.707	Homo_sapiens
ENSRNOG00000011584	Gpatch1	100	84.013	ENSAMEG00000015575	GPATCH1	100	83.906	Ailuropoda_melanoleuca
ENSRNOG00000011584	Gpatch1	81	70.718	ENSAOCG00000006668	gpatch1	75	70.718	Amphiprion_ocellaris
ENSRNOG00000011584	Gpatch1	81	54.789	ENSAPEG00000000026	gpatch1	90	52.370	Amphiprion_percula
ENSRNOG00000011584	Gpatch1	89	51.317	ENSATEG00000014494	gpatch1	94	50.492	Anabas_testudineus
ENSRNOG00000011584	Gpatch1	92	58.434	ENSAPLG00000007584	GPATCH1	96	61.175	Anas_platyrhynchos
ENSRNOG00000011584	Gpatch1	100	80.279	ENSANAG00000027002	GPATCH1	100	80.449	Aotus_nancymaae
ENSRNOG00000011584	Gpatch1	81	54.974	ENSACLG00000024740	gpatch1	79	54.719	Astatotilapia_calliptera
ENSRNOG00000011584	Gpatch1	93	52.570	ENSAMXG00000020177	gpatch1	98	52.593	Astyanax_mexicanus
ENSRNOG00000011584	Gpatch1	91	83.510	ENSBTAG00000000721	GPATCH1	100	80.043	Bos_taurus
ENSRNOG00000011584	Gpatch1	68	30.606	WBGene00011109	R07E5.1	77	30.286	Caenorhabditis_elegans
ENSRNOG00000011584	Gpatch1	100	80.171	ENSCJAG00000000684	GPATCH1	100	80.342	Callithrix_jacchus
ENSRNOG00000011584	Gpatch1	100	83.816	ENSCAFG00000007457	GPATCH1	84	83.816	Canis_familiaris
ENSRNOG00000011584	Gpatch1	94	83.982	ENSCAFG00020019731	GPATCH1	93	84.028	Canis_lupus_dingo
ENSRNOG00000011584	Gpatch1	99	83.424	ENSCHIG00000019626	GPATCH1	100	80.472	Capra_hircus
ENSRNOG00000011584	Gpatch1	97	78.390	ENSCAPG00000008827	GPATCH1	100	78.170	Cavia_aperea
ENSRNOG00000011584	Gpatch1	100	79.465	ENSCPOG00000024477	GPATCH1	100	79.679	Cavia_porcellus
ENSRNOG00000011584	Gpatch1	100	79.421	ENSCCAG00000024676	GPATCH1	100	80.021	Cebus_capucinus
ENSRNOG00000011584	Gpatch1	100	83.816	ENSCATG00000043637	GPATCH1	100	80.876	Cercocebus_atys
ENSRNOG00000011584	Gpatch1	96	80.112	ENSCLAG00000003395	-	93	80.240	Chinchilla_lanigera
ENSRNOG00000011584	Gpatch1	100	81.799	ENSCSAG00000004743	GPATCH1	100	78.655	Chlorocebus_sabaeus
ENSRNOG00000011584	Gpatch1	92	72.569	ENSCHOG00000012865	GPATCH1	89	75.486	Choloepus_hoffmanni
ENSRNOG00000011584	Gpatch1	78	68.665	ENSCPBG00000000666	GPATCH1	92	67.667	Chrysemys_picta_bellii
ENSRNOG00000011584	Gpatch1	68	37.112	ENSCING00000012518	-	91	34.065	Ciona_intestinalis
ENSRNOG00000011584	Gpatch1	90	78.490	ENSCANG00000012540	GPATCH1	100	78.490	Colobus_angolensis_palliatus
ENSRNOG00000011584	Gpatch1	97	88.889	ENSCGRG00001016736	Gpatch1	100	88.889	Cricetulus_griseus_chok1gshd
ENSRNOG00000011584	Gpatch1	93	73.543	ENSCGRG00000005069	Gpatch1	92	72.970	Cricetulus_griseus_crigri
ENSRNOG00000011584	Gpatch1	80	50.557	ENSCSEG00000019456	-	84	61.468	Cynoglossus_semilaevis
ENSRNOG00000011584	Gpatch1	81	53.797	ENSDARG00000033418	gpatch1	93	50.436	Danio_rerio
ENSRNOG00000011584	Gpatch1	91	81.904	ENSDNOG00000005291	GPATCH1	96	81.481	Dasypus_novemcinctus
ENSRNOG00000011584	Gpatch1	94	77.702	ENSDORG00000012546	Gpatch1	96	78.538	Dipodomys_ordii
ENSRNOG00000011584	Gpatch1	99	72.914	ENSETEG00000003626	GPATCH1	94	73.928	Echinops_telfairi
ENSRNOG00000011584	Gpatch1	94	37.134	ENSEBUG00000011286	gpatch1	94	37.307	Eptatretus_burgeri
ENSRNOG00000011584	Gpatch1	91	84.242	ENSEASG00005021162	GPATCH1	93	85.357	Equus_asinus_asinus
ENSRNOG00000011584	Gpatch1	94	84.078	ENSECAG00000022743	GPATCH1	90	84.125	Equus_caballus
ENSRNOG00000011584	Gpatch1	77	78.431	ENSEEUG00000012925	GPATCH1	77	78.431	Erinaceus_europaeus
ENSRNOG00000011584	Gpatch1	99	48.163	ENSELUG00000018195	gpatch1	92	50.274	Esox_lucius
ENSRNOG00000011584	Gpatch1	100	82.725	ENSFCAG00000014917	GPATCH1	100	82.725	Felis_catus
ENSRNOG00000011584	Gpatch1	99	62.040	ENSFALG00000007821	GPATCH1	99	60.463	Ficedula_albicollis
ENSRNOG00000011584	Gpatch1	96	80.936	ENSFDAG00000003871	GPATCH1	100	80.936	Fukomys_damarensis
ENSRNOG00000011584	Gpatch1	75	52.436	ENSGMOG00000003830	gpatch1	99	52.436	Gadus_morhua
ENSRNOG00000011584	Gpatch1	93	62.854	ENSGALG00000004839	GPATCH1	96	62.967	Gallus_gallus
ENSRNOG00000011584	Gpatch1	81	51.995	ENSGACG00000017544	gpatch1	96	49.773	Gasterosteus_aculeatus
ENSRNOG00000011584	Gpatch1	100	64.211	ENSGAGG00000010067	GPATCH1	100	64.187	Gopherus_agassizii
ENSRNOG00000011584	Gpatch1	98	82.661	ENSGGOG00000010862	GPATCH1	100	80.241	Gorilla_gorilla
ENSRNOG00000011584	Gpatch1	81	55.541	ENSHBUG00000023462	gpatch1	94	51.206	Haplochromis_burtoni
ENSRNOG00000011584	Gpatch1	100	81.799	ENSHGLG00000009334	GPATCH1	100	81.692	Heterocephalus_glaber_female
ENSRNOG00000011584	Gpatch1	100	81.906	ENSHGLG00100018074	GPATCH1	100	81.799	Heterocephalus_glaber_male
ENSRNOG00000011584	Gpatch1	93	52.649	ENSIPUG00000014977	gpatch1	93	51.638	Ictalurus_punctatus
ENSRNOG00000011584	Gpatch1	100	83.387	ENSSTOG00000003720	GPATCH1	100	83.387	Ictidomys_tridecemlineatus
ENSRNOG00000011584	Gpatch1	91	85.024	ENSJJAG00000023765	Gpatch1	100	81.613	Jaculus_jaculus
ENSRNOG00000011584	Gpatch1	89	52.093	ENSKMAG00000017950	gpatch1	89	52.093	Kryptolebias_marmoratus
ENSRNOG00000011584	Gpatch1	88	59.541	ENSLACG00000008130	GPATCH1	99	57.642	Latimeria_chalumnae
ENSRNOG00000011584	Gpatch1	82	58.269	ENSLOCG00000001800	gpatch1	92	54.821	Lepisosteus_oculatus
ENSRNOG00000011584	Gpatch1	99	82.372	ENSLAFG00000013589	GPATCH1	100	82.511	Loxodonta_africana
ENSRNOG00000011584	Gpatch1	91	84.254	ENSMFAG00000034418	GPATCH1	96	84.075	Macaca_fascicularis
ENSRNOG00000011584	Gpatch1	100	83.405	ENSMMUG00000011790	GPATCH1	100	80.470	Macaca_mulatta
ENSRNOG00000011584	Gpatch1	100	82.958	ENSMNEG00000045084	GPATCH1	100	80.021	Macaca_nemestrina
ENSRNOG00000011584	Gpatch1	100	72.883	ENSMLEG00000043840	GPATCH1	100	69.979	Mandrillus_leucophaeus
ENSRNOG00000011584	Gpatch1	81	54.974	ENSMZEG00005001926	gpatch1	80	54.719	Maylandia_zebra
ENSRNOG00000011584	Gpatch1	90	62.850	ENSMGAG00000005775	GPATCH1	92	63.636	Meleagris_gallopavo
ENSRNOG00000011584	Gpatch1	90	76.415	ENSMICG00000004829	GPATCH1	96	75.862	Microcebus_murinus
ENSRNOG00000011584	Gpatch1	99	88.578	ENSMOCG00000000174	Gpatch1	93	89.965	Microtus_ochrogaster
ENSRNOG00000011584	Gpatch1	81	50.381	ENSMMOG00000002140	gpatch1	87	51.013	Mola_mola
ENSRNOG00000011584	Gpatch1	91	72.019	ENSMODG00000012226	GPATCH1	100	70.457	Monodelphis_domestica
ENSRNOG00000011584	Gpatch1	99	49.326	ENSMALG00000014386	gpatch1	94	50.275	Monopterus_albus
ENSRNOG00000011584	Gpatch1	100	95.806	ENSMUSG00000063808	Gpatch1	100	97.959	Mus_musculus
ENSRNOG00000011584	Gpatch1	100	94.742	MGP_PahariEiJ_G0012816	Gpatch1	100	98.980	Mus_pahari
ENSRNOG00000011584	Gpatch1	100	95.494	MGP_SPRETEiJ_G0030681	Gpatch1	100	98.980	Mus_spretus
ENSRNOG00000011584	Gpatch1	100	83.155	ENSMPUG00000007658	GPATCH1	100	83.155	Mustela_putorius_furo
ENSRNOG00000011584	Gpatch1	100	82.492	ENSMLUG00000012161	GPATCH1	100	79.484	Myotis_lucifugus
ENSRNOG00000011584	Gpatch1	100	85.177	ENSNGAG00000012455	Gpatch1	100	83.459	Nannospalax_galili
ENSRNOG00000011584	Gpatch1	100	83.708	ENSNLEG00000007659	GPATCH1	100	80.556	Nomascus_leucogenys
ENSRNOG00000011584	Gpatch1	78	66.162	ENSMEUG00000015174	GPATCH1	78	66.120	Notamacropus_eugenii
ENSRNOG00000011584	Gpatch1	99	80.922	ENSODEG00000007103	GPATCH1	99	80.815	Octodon_degus
ENSRNOG00000011584	Gpatch1	82	55.541	ENSONIG00000003302	gpatch1	91	53.279	Oreochromis_niloticus
ENSRNOG00000011584	Gpatch1	99	70.968	ENSOANG00000012732	GPATCH1	99	70.860	Ornithorhynchus_anatinus
ENSRNOG00000011584	Gpatch1	100	85.193	ENSOCUG00000015905	GPATCH1	100	85.086	Oryctolagus_cuniculus
ENSRNOG00000011584	Gpatch1	89	51.708	ENSORLG00000018706	gpatch1	92	50.507	Oryzias_latipes
ENSRNOG00000011584	Gpatch1	89	49.825	ENSOMEG00000022688	gpatch1	90	50.464	Oryzias_melastigma
ENSRNOG00000011584	Gpatch1	85	85.335	ENSOGAG00000004016	GPATCH1	96	86.298	Otolemur_garnettii
ENSRNOG00000011584	Gpatch1	90	83.492	ENSOARG00000004365	GPATCH1	99	79.784	Ovis_aries
ENSRNOG00000011584	Gpatch1	100	83.280	ENSPPAG00000020990	GPATCH1	100	80.342	Pan_paniscus
ENSRNOG00000011584	Gpatch1	100	83.047	ENSPPRG00000017245	GPATCH1	100	83.047	Panthera_pardus
ENSRNOG00000011584	Gpatch1	100	83.691	ENSPTIG00000019649	GPATCH1	100	83.691	Panthera_tigris_altaica
ENSRNOG00000011584	Gpatch1	100	83.065	ENSPTRG00000010803	GPATCH1	100	80.128	Pan_troglodytes
ENSRNOG00000011584	Gpatch1	91	84.489	ENSPANG00000012374	GPATCH1	97	83.852	Papio_anubis
ENSRNOG00000011584	Gpatch1	81	57.197	ENSPKIG00000020745	gpatch1	77	56.688	Paramormyrops_kingsleyae
ENSRNOG00000011584	Gpatch1	100	64.588	ENSPSIG00000013433	GPATCH1	100	64.376	Pelodiscus_sinensis
ENSRNOG00000011584	Gpatch1	100	89.796	ENSPEMG00000000636	Gpatch1	100	88.185	Peromyscus_maniculatus_bairdii
ENSRNOG00000011584	Gpatch1	91	72.792	ENSPCIG00000021003	GPATCH1	98	70.295	Phascolarctos_cinereus
ENSRNOG00000011584	Gpatch1	71	50.595	ENSPREG00000008264	gpatch1	88	48.238	Poecilia_reticulata
ENSRNOG00000011584	Gpatch1	100	80.922	ENSPPYG00000009824	GPATCH1	100	77.991	Pongo_abelii
ENSRNOG00000011584	Gpatch1	83	74.645	ENSPCAG00000005931	GPATCH1	93	74.502	Procavia_capensis
ENSRNOG00000011584	Gpatch1	93	79.724	ENSPCOG00000009674	GPATCH1	98	78.770	Propithecus_coquereli
ENSRNOG00000011584	Gpatch1	83	83.679	ENSPVAG00000017767	GPATCH1	91	83.679	Pteropus_vampyrus
ENSRNOG00000011584	Gpatch1	82	54.851	ENSPNYG00000018189	gpatch1	89	55.327	Pundamilia_nyererei
ENSRNOG00000011584	Gpatch1	92	53.159	ENSPNAG00000013187	gpatch1	93	51.923	Pygocentrus_nattereri
ENSRNOG00000011584	Gpatch1	100	76.017	ENSRBIG00000034723	GPATCH1	100	72.708	Rhinopithecus_bieti
ENSRNOG00000011584	Gpatch1	100	83.387	ENSRROG00000024428	GPATCH1	100	80.235	Rhinopithecus_roxellana
ENSRNOG00000011584	Gpatch1	100	83.013	ENSSBOG00000034650	GPATCH1	100	80.983	Saimiri_boliviensis_boliviensis
ENSRNOG00000011584	Gpatch1	99	71.353	ENSSHAG00000016016	GPATCH1	99	71.565	Sarcophilus_harrisii
ENSRNOG00000011584	Gpatch1	81	56.178	ENSSFOG00015011535	gpatch1	92	52.922	Scleropages_formosus
ENSRNOG00000011584	Gpatch1	99	45.357	ENSSMAG00000002883	gpatch1	96	46.800	Scophthalmus_maximus
ENSRNOG00000011584	Gpatch1	81	52.179	ENSSDUG00000007444	gpatch1	80	52.795	Seriola_dumerili
ENSRNOG00000011584	Gpatch1	81	52.488	ENSSLDG00000002856	gpatch1	89	52.244	Seriola_lalandi_dorsalis
ENSRNOG00000011584	Gpatch1	72	81.953	ENSSARG00000004108	GPATCH1	72	80.917	Sorex_araneus
ENSRNOG00000011584	Gpatch1	91	85.159	ENSSSCG00000002865	GPATCH1	96	84.705	Sus_scrofa
ENSRNOG00000011584	Gpatch1	99	62.728	ENSTGUG00000009401	GPATCH1	94	63.176	Taeniopygia_guttata
ENSRNOG00000011584	Gpatch1	81	52.344	ENSTRUG00000025081	gpatch1	93	49.551	Takifugu_rubripes
ENSRNOG00000011584	Gpatch1	81	52.344	ENSTRUG00000005785	-	93	49.551	Takifugu_rubripes
ENSRNOG00000011584	Gpatch1	81	53.359	ENSTNIG00000002554	gpatch1	97	53.806	Tetraodon_nigroviridis
ENSRNOG00000011584	Gpatch1	63	74.257	ENSTBEG00000007750	-	83	74.257	Tupaia_belangeri
ENSRNOG00000011584	Gpatch1	91	76.381	ENSTTRG00000012221	GPATCH1	100	76.552	Tursiops_truncatus
ENSRNOG00000011584	Gpatch1	91	84.024	ENSUMAG00000014645	GPATCH1	100	82.220	Ursus_maritimus
ENSRNOG00000011584	Gpatch1	79	94.857	ENSVPAG00000010313	GPATCH1	87	93.989	Vicugna_pacos
ENSRNOG00000011584	Gpatch1	94	83.867	ENSVVUG00000016572	GPATCH1	93	83.912	Vulpes_vulpes
ENSRNOG00000011584	Gpatch1	99	51.312	ENSXETG00000018276	gpatch1	100	50.738	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0071013	catalytic step 2 spliceosome	-	IEA	Component
GO:0071013	catalytic step 2 spliceosome	-	ISO	Component