EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000011627 (Gene tree)
Gene ID: 365703
Gene Symbol: Zfr
Alias: LOC365703
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 62798 bases
Position: chr2:62150251-62213048
Accession: 1311890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000016196	DZF	PF07528.14	6.6e-70	1	1
ENSRNOP00000075053	DZF	PF07528.14	3.7e-69	1	1
ENSRNOP00000073762	DZF	PF07528.14	5.2e-26	1	1
ENSRNOP00000016196	zf-met	PF12874.7	2e-21	1	3
ENSRNOP00000016196	zf-met	PF12874.7	2e-21	2	3
ENSRNOP00000016196	zf-met	PF12874.7	2e-21	3	3
ENSRNOP00000075053	zf-met	PF12874.7	8.6e-15	1	2
ENSRNOP00000075053	zf-met	PF12874.7	8.6e-15	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000087636	-	1733	-	ENSRNOP00000073762	128 (aa)	-	B1WC00
ENSRNOT00000016196	-	5011	XM_006232054	ENSRNOP00000016196	1074 (aa)	XP_006232116	A0A0H2UHJ5
ENSRNOT00000080241	-	3222	-	ENSRNOP00000075053	1073 (aa)	-	Q562A2

Gene Model

Click here to download ENSRNOG00000011627's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000011627's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000011627	Zfr	70	63.333	ENSRNOG00000010150	Strbp	51	54.985
ENSRNOG00000011627	Zfr	96	56.098	ENSRNOG00000020416	Zfr2	84	44.231

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000011627	Zfr	100	99.219	ENSG00000056097	ZFR	100	97.952	Homo_sapiens
ENSRNOG00000011627	Zfr	100	84.496	ENSAPOG00000009740	zfr	100	72.643	Acanthochromis_polyacanthus
ENSRNOG00000011627	Zfr	100	99.219	ENSAMEG00000006184	ZFR	100	98.045	Ailuropoda_melanoleuca
ENSRNOG00000011627	Zfr	100	84.496	ENSACIG00000015926	zfr	100	74.650	Amphilophus_citrinellus
ENSRNOG00000011627	Zfr	100	74.040	ENSAOCG00000013876	zfr	100	74.771	Amphiprion_ocellaris
ENSRNOG00000011627	Zfr	100	84.496	ENSAPEG00000024383	zfr	100	77.422	Amphiprion_percula
ENSRNOG00000011627	Zfr	100	83.721	ENSATEG00000010271	zfr	100	77.156	Anabas_testudineus
ENSRNOG00000011627	Zfr	78	84.671	ENSAPLG00000015627	-	100	84.910	Anas_platyrhynchos
ENSRNOG00000011627	Zfr	100	96.875	ENSACAG00000007880	ZFR	100	87.848	Anolis_carolinensis
ENSRNOG00000011627	Zfr	100	99.219	ENSANAG00000023333	ZFR	100	98.045	Aotus_nancymaae
ENSRNOG00000011627	Zfr	100	84.496	ENSACLG00000016832	zfr	100	74.766	Astatotilapia_calliptera
ENSRNOG00000011627	Zfr	100	79.070	ENSAMXG00000019511	zfr	100	79.291	Astyanax_mexicanus
ENSRNOG00000011627	Zfr	100	100.000	ENSBTAG00000008414	ZFR	100	98.045	Bos_taurus
ENSRNOG00000011627	Zfr	100	99.219	ENSCJAG00000018740	ZFR	100	98.138	Callithrix_jacchus
ENSRNOG00000011627	Zfr	100	95.543	ENSCAFG00000018886	ZFR	100	97.963	Canis_familiaris
ENSRNOG00000011627	Zfr	100	99.219	ENSCAFG00020016859	-	100	98.045	Canis_lupus_dingo
ENSRNOG00000011627	Zfr	100	100.000	ENSCHIG00000007710	ZFR	100	97.858	Capra_hircus
ENSRNOG00000011627	Zfr	100	98.438	ENSTSYG00000028695	-	100	98.438	Carlito_syrichta
ENSRNOG00000011627	Zfr	100	99.219	ENSTSYG00000010670	ZFR	99	96.935	Carlito_syrichta
ENSRNOG00000011627	Zfr	100	75.000	ENSCAPG00000015655	ZFR	100	74.951	Cavia_aperea
ENSRNOG00000011627	Zfr	100	99.219	ENSCPOG00000000862	ZFR	100	91.537	Cavia_porcellus
ENSRNOG00000011627	Zfr	100	99.219	ENSCCAG00000024473	ZFR	100	97.952	Cebus_capucinus
ENSRNOG00000011627	Zfr	100	99.219	ENSCATG00000038311	ZFR	100	97.952	Cercocebus_atys
ENSRNOG00000011627	Zfr	100	99.219	ENSCLAG00000007408	ZFR	100	97.374	Chinchilla_lanigera
ENSRNOG00000011627	Zfr	100	99.219	ENSCSAG00000017180	ZFR	100	97.765	Chlorocebus_sabaeus
ENSRNOG00000011627	Zfr	100	97.656	ENSCHOG00000003848	ZFR	100	77.831	Choloepus_hoffmanni
ENSRNOG00000011627	Zfr	100	96.875	ENSCPBG00000024211	ZFR	100	91.187	Chrysemys_picta_bellii
ENSRNOG00000011627	Zfr	96	75.610	ENSCANG00000029251	-	98	75.610	Colobus_angolensis_palliatus
ENSRNOG00000011627	Zfr	100	99.219	ENSCANG00000017807	ZFR	100	97.765	Colobus_angolensis_palliatus
ENSRNOG00000011627	Zfr	100	99.219	ENSCGRG00001016009	Zfr	100	98.976	Cricetulus_griseus_chok1gshd
ENSRNOG00000011627	Zfr	100	99.219	ENSCGRG00000001228	Zfr	99	96.872	Cricetulus_griseus_crigri
ENSRNOG00000011627	Zfr	99	82.031	ENSCSEG00000011169	ZFR	99	75.207	Cynoglossus_semilaevis
ENSRNOG00000011627	Zfr	99	83.594	ENSCSEG00000009224	zfr	100	74.296	Cynoglossus_semilaevis
ENSRNOG00000011627	Zfr	99	82.031	ENSCVAG00000016494	zfr	100	73.491	Cyprinodon_variegatus
ENSRNOG00000011627	Zfr	100	85.271	ENSDARG00000027109	zfr	100	78.760	Danio_rerio
ENSRNOG00000011627	Zfr	100	99.219	ENSDNOG00000008852	ZFR	100	97.212	Dasypus_novemcinctus
ENSRNOG00000011627	Zfr	100	99.219	ENSDORG00000016643	Zfr	100	97.765	Dipodomys_ordii
ENSRNOG00000011627	Zfr	100	96.875	ENSETEG00000008937	ZFR	100	91.899	Echinops_telfairi
ENSRNOG00000011627	Zfr	97	58.065	ENSEBUG00000012503	-	99	57.193	Eptatretus_burgeri
ENSRNOG00000011627	Zfr	100	98.438	ENSEASG00005007104	ZFR	100	97.765	Equus_asinus_asinus
ENSRNOG00000011627	Zfr	82	97.614	ENSECAG00000012851	ZFR	99	97.614	Equus_caballus
ENSRNOG00000011627	Zfr	100	99.219	ENSECAG00000033601	-	99	99.225	Equus_caballus
ENSRNOG00000011627	Zfr	95	84.532	ENSEEUG00000014206	ZFR	94	84.532	Erinaceus_europaeus
ENSRNOG00000011627	Zfr	99	78.125	ENSELUG00000022743	zfr	99	68.407	Esox_lucius
ENSRNOG00000011627	Zfr	100	99.219	ENSFCAG00000000354	ZFR	100	98.138	Felis_catus
ENSRNOG00000011627	Zfr	100	96.875	ENSFALG00000002149	ZFR	100	89.758	Ficedula_albicollis
ENSRNOG00000011627	Zfr	100	98.438	ENSFDAG00000012993	ZFR	100	96.890	Fukomys_damarensis
ENSRNOG00000011627	Zfr	99	83.594	ENSFHEG00000012064	zfr	99	70.973	Fundulus_heteroclitus
ENSRNOG00000011627	Zfr	100	79.070	ENSGMOG00000003967	zfr	94	82.432	Gadus_morhua
ENSRNOG00000011627	Zfr	100	96.875	ENSGALG00000003235	-	100	91.527	Gallus_gallus
ENSRNOG00000011627	Zfr	100	95.312	ENSGALG00000034488	-	100	89.385	Gallus_gallus
ENSRNOG00000011627	Zfr	99	82.812	ENSGAFG00000016229	zfr	100	68.880	Gambusia_affinis
ENSRNOG00000011627	Zfr	99	73.779	ENSGACG00000005045	zfr	100	73.219	Gasterosteus_aculeatus
ENSRNOG00000011627	Zfr	95	90.294	ENSGAGG00000013544	ZFR	99	90.490	Gopherus_agassizii
ENSRNOG00000011627	Zfr	100	99.219	ENSGGOG00000016302	ZFR	100	97.952	Gorilla_gorilla
ENSRNOG00000011627	Zfr	100	66.154	ENSHBUG00000013572	-	100	66.154	Haplochromis_burtoni
ENSRNOG00000011627	Zfr	100	99.219	ENSHGLG00000008088	ZFR	100	97.393	Heterocephalus_glaber_female
ENSRNOG00000011627	Zfr	100	99.219	ENSHGLG00100016776	ZFR	99	97.276	Heterocephalus_glaber_male
ENSRNOG00000011627	Zfr	100	75.641	ENSHCOG00000001548	zfr	100	75.755	Hippocampus_comes
ENSRNOG00000011627	Zfr	100	78.297	ENSIPUG00000008192	zfr	100	79.163	Ictalurus_punctatus
ENSRNOG00000011627	Zfr	100	99.219	ENSSTOG00000008742	ZFR	100	97.020	Ictidomys_tridecemlineatus
ENSRNOG00000011627	Zfr	100	99.219	ENSJJAG00000023064	Zfr	98	92.344	Jaculus_jaculus
ENSRNOG00000011627	Zfr	92	75.351	ENSKMAG00000009468	zfr	99	76.253	Kryptolebias_marmoratus
ENSRNOG00000011627	Zfr	100	81.395	ENSLBEG00000010783	zfr	100	76.287	Labrus_bergylta
ENSRNOG00000011627	Zfr	100	88.281	ENSLACG00000000831	ZFR	100	79.463	Latimeria_chalumnae
ENSRNOG00000011627	Zfr	100	80.620	ENSLOCG00000006727	zfr	100	80.072	Lepisosteus_oculatus
ENSRNOG00000011627	Zfr	100	98.438	ENSLAFG00000002308	ZFR	100	97.148	Loxodonta_africana
ENSRNOG00000011627	Zfr	100	99.219	ENSMFAG00000042691	ZFR	100	97.020	Macaca_fascicularis
ENSRNOG00000011627	Zfr	100	99.219	ENSMMUG00000001317	ZFR	100	97.952	Macaca_mulatta
ENSRNOG00000011627	Zfr	100	99.219	ENSMNEG00000029441	ZFR	100	97.952	Macaca_nemestrina
ENSRNOG00000011627	Zfr	100	99.219	ENSMLEG00000028503	ZFR	100	97.769	Mandrillus_leucophaeus
ENSRNOG00000011627	Zfr	100	80.620	ENSMAMG00000017351	zfr	100	76.369	Mastacembelus_armatus
ENSRNOG00000011627	Zfr	100	84.496	ENSMZEG00005021243	zfr	100	74.766	Maylandia_zebra
ENSRNOG00000011627	Zfr	96	95.935	ENSMGAG00000002841	ZFR	99	77.348	Meleagris_gallopavo
ENSRNOG00000011627	Zfr	100	99.219	ENSMAUG00000000976	Zfr	100	98.045	Mesocricetus_auratus
ENSRNOG00000011627	Zfr	100	99.219	ENSMICG00000001244	ZFR	100	97.858	Microcebus_murinus
ENSRNOG00000011627	Zfr	100	99.219	ENSMOCG00000018630	Zfr	100	98.696	Microtus_ochrogaster
ENSRNOG00000011627	Zfr	100	83.721	ENSMMOG00000012585	zfr	90	75.873	Mola_mola
ENSRNOG00000011627	Zfr	100	98.438	ENSMODG00000020412	ZFR	100	94.227	Monodelphis_domestica
ENSRNOG00000011627	Zfr	100	84.496	ENSMALG00000007123	zfr	94	84.932	Monopterus_albus
ENSRNOG00000011627	Zfr	100	99.255	MGP_CAROLIEiJ_G0019681	Zfr	100	99.255	Mus_caroli
ENSRNOG00000011627	Zfr	100	100.000	ENSMUSG00000022201	Zfr	100	100.000	Mus_musculus
ENSRNOG00000011627	Zfr	100	100.000	MGP_PahariEiJ_G0016057	Zfr	100	99.348	Mus_pahari
ENSRNOG00000011627	Zfr	100	100.000	MGP_SPRETEiJ_G0020574	Zfr	100	99.069	Mus_spretus
ENSRNOG00000011627	Zfr	73	97.332	ENSMPUG00000015193	-	99	97.332	Mustela_putorius_furo
ENSRNOG00000011627	Zfr	54	100.000	ENSMPUG00000015194	-	84	100.000	Mustela_putorius_furo
ENSRNOG00000011627	Zfr	100	99.219	ENSMLUG00000011797	ZFR	100	97.005	Myotis_lucifugus
ENSRNOG00000011627	Zfr	100	100.000	ENSNGAG00000018328	Zfr	100	98.138	Nannospalax_galili
ENSRNOG00000011627	Zfr	94	84.656	ENSNBRG00000008378	zfr	100	73.617	Neolamprologus_brichardi
ENSRNOG00000011627	Zfr	100	99.219	ENSNLEG00000014098	ZFR	100	97.672	Nomascus_leucogenys
ENSRNOG00000011627	Zfr	100	98.438	ENSMEUG00000010225	ZFR	100	87.549	Notamacropus_eugenii
ENSRNOG00000011627	Zfr	100	98.438	ENSOPRG00000016756	ZFR	84	99.200	Ochotona_princeps
ENSRNOG00000011627	Zfr	100	99.219	ENSODEG00000001990	ZFR	100	97.374	Octodon_degus
ENSRNOG00000011627	Zfr	87	74.107	ENSONIG00000013960	zfr	100	60.367	Oreochromis_niloticus
ENSRNOG00000011627	Zfr	100	49.612	ENSOANG00000010675	-	84	53.125	Ornithorhynchus_anatinus
ENSRNOG00000011627	Zfr	100	98.438	ENSOANG00000014434	ZFR	99	93.204	Ornithorhynchus_anatinus
ENSRNOG00000011627	Zfr	100	99.219	ENSOCUG00000016737	ZFR	100	97.858	Oryctolagus_cuniculus
ENSRNOG00000011627	Zfr	99	79.688	ENSORLG00000017243	zfr	99	75.393	Oryzias_latipes
ENSRNOG00000011627	Zfr	99	79.688	ENSORLG00020014823	zfr	99	75.298	Oryzias_latipes_hni
ENSRNOG00000011627	Zfr	99	79.688	ENSORLG00015005801	zfr	99	75.298	Oryzias_latipes_hsok
ENSRNOG00000011627	Zfr	99	80.469	ENSOMEG00000003336	zfr	99	76.352	Oryzias_melastigma
ENSRNOG00000011627	Zfr	100	95.442	ENSOGAG00000015117	ZFR	100	95.442	Otolemur_garnettii
ENSRNOG00000011627	Zfr	100	100.000	ENSOARG00000012233	ZFR	100	96.896	Ovis_aries
ENSRNOG00000011627	Zfr	100	99.219	ENSPPAG00000027447	ZFR	99	97.670	Pan_paniscus
ENSRNOG00000011627	Zfr	100	99.219	ENSPPRG00000008253	ZFR	100	98.231	Panthera_pardus
ENSRNOG00000011627	Zfr	100	99.219	ENSPTIG00000010038	ZFR	99	95.238	Panthera_tigris_altaica
ENSRNOG00000011627	Zfr	100	99.219	ENSPTRG00000016771	ZFR	100	98.045	Pan_troglodytes
ENSRNOG00000011627	Zfr	100	99.219	ENSPANG00000003729	ZFR	100	95.810	Papio_anubis
ENSRNOG00000011627	Zfr	100	79.845	ENSPKIG00000016781	ZFR	100	78.841	Paramormyrops_kingsleyae
ENSRNOG00000011627	Zfr	100	79.845	ENSPKIG00000007596	ZFR	100	69.286	Paramormyrops_kingsleyae
ENSRNOG00000011627	Zfr	100	96.875	ENSPSIG00000005779	ZFR	100	92.793	Pelodiscus_sinensis
ENSRNOG00000011627	Zfr	100	81.395	ENSPMGG00000015984	zfr	100	70.833	Periophthalmus_magnuspinnatus
ENSRNOG00000011627	Zfr	96	97.391	ENSPEMG00000014573	Zfr	98	97.391	Peromyscus_maniculatus_bairdii
ENSRNOG00000011627	Zfr	100	98.438	ENSPCIG00000020906	ZFR	100	94.041	Phascolarctos_cinereus
ENSRNOG00000011627	Zfr	99	82.812	ENSPFOG00000005931	zfr	100	75.663	Poecilia_formosa
ENSRNOG00000011627	Zfr	99	82.812	ENSPLAG00000002042	-	98	82.946	Poecilia_latipinna
ENSRNOG00000011627	Zfr	99	82.812	ENSPMEG00000001941	-	100	82.812	Poecilia_mexicana
ENSRNOG00000011627	Zfr	99	82.812	ENSPREG00000011947	zfr	100	76.151	Poecilia_reticulata
ENSRNOG00000011627	Zfr	100	99.219	ENSPPYG00000015378	ZFR	99	97.381	Pongo_abelii
ENSRNOG00000011627	Zfr	100	99.219	ENSPCAG00000007277	ZFR	100	89.013	Procavia_capensis
ENSRNOG00000011627	Zfr	95	97.647	ENSPCOG00000000045	ZFR	99	97.647	Propithecus_coquereli
ENSRNOG00000011627	Zfr	100	96.875	ENSPVAG00000004780	ZFR	94	97.576	Pteropus_vampyrus
ENSRNOG00000011627	Zfr	100	84.496	ENSPNYG00000006239	zfr	100	74.766	Pundamilia_nyererei
ENSRNOG00000011627	Zfr	93	86.772	ENSPNAG00000025151	zfr	100	81.136	Pygocentrus_nattereri
ENSRNOG00000011627	Zfr	100	99.219	ENSRBIG00000041561	ZFR	100	97.858	Rhinopithecus_bieti
ENSRNOG00000011627	Zfr	100	99.219	ENSRROG00000044008	ZFR	100	97.858	Rhinopithecus_roxellana
ENSRNOG00000011627	Zfr	100	99.219	ENSSBOG00000024150	ZFR	99	97.568	Saimiri_boliviensis_boliviensis
ENSRNOG00000011627	Zfr	100	98.438	ENSSHAG00000015478	ZFR	100	93.786	Sarcophilus_harrisii
ENSRNOG00000011627	Zfr	100	80.620	ENSSFOG00015018352	-	100	80.620	Scleropages_formosus
ENSRNOG00000011627	Zfr	100	80.620	ENSSFOG00015017300	ZFR	100	73.443	Scleropages_formosus
ENSRNOG00000011627	Zfr	100	82.171	ENSSMAG00000000320	zfr	100	76.138	Scophthalmus_maximus
ENSRNOG00000011627	Zfr	100	83.721	ENSSDUG00000013882	zfr	100	77.227	Seriola_dumerili
ENSRNOG00000011627	Zfr	100	83.721	ENSSLDG00000000762	zfr	100	70.248	Seriola_lalandi_dorsalis
ENSRNOG00000011627	Zfr	100	99.219	ENSSARG00000006571	ZFR	93	99.099	Sorex_araneus
ENSRNOG00000011627	Zfr	100	96.094	ENSSPUG00000016786	ZFR	100	89.893	Sphenodon_punctatus
ENSRNOG00000011627	Zfr	100	83.721	ENSSPAG00000019293	zfr	100	77.043	Stegastes_partitus
ENSRNOG00000011627	Zfr	100	99.219	ENSSSCG00000027681	ZFR	100	97.858	Sus_scrofa
ENSRNOG00000011627	Zfr	100	95.385	ENSTGUG00000001909	ZFR	100	90.986	Taeniopygia_guttata
ENSRNOG00000011627	Zfr	100	84.496	ENSTRUG00000016620	zfr	100	76.951	Takifugu_rubripes
ENSRNOG00000011627	Zfr	100	82.946	ENSTNIG00000018856	zfr	98	72.222	Tetraodon_nigroviridis
ENSRNOG00000011627	Zfr	100	99.219	ENSTBEG00000017687	ZFR	100	77.188	Tupaia_belangeri
ENSRNOG00000011627	Zfr	100	99.219	ENSTTRG00000017321	ZFR	100	92.737	Tursiops_truncatus
ENSRNOG00000011627	Zfr	78	97.491	ENSUAMG00000000172	-	99	97.491	Ursus_americanus
ENSRNOG00000011627	Zfr	100	99.219	ENSUAMG00000000145	-	100	99.219	Ursus_americanus
ENSRNOG00000011627	Zfr	100	99.219	ENSUMAG00000013810	-	100	99.219	Ursus_maritimus
ENSRNOG00000011627	Zfr	78	97.491	ENSUMAG00000013805	-	99	97.491	Ursus_maritimus
ENSRNOG00000011627	Zfr	100	99.219	ENSVPAG00000011011	ZFR	100	94.693	Vicugna_pacos
ENSRNOG00000011627	Zfr	100	99.219	ENSVVUG00000022171	-	100	98.138	Vulpes_vulpes
ENSRNOG00000011627	Zfr	100	92.188	ENSXETG00000015598	zfr	100	79.647	Xenopus_tropicalis
ENSRNOG00000011627	Zfr	99	82.812	ENSXCOG00000009361	zfr	100	74.291	Xiphophorus_couchianus
ENSRNOG00000011627	Zfr	99	82.812	ENSXMAG00000013356	zfr	100	74.197	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003725	double-stranded RNA binding	21873635.	IBA	Function
GO:0003727	single-stranded RNA binding	21873635.	IBA	Function
GO:0005515	protein binding	16277607.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005694	chromosome	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0007275	multicellular organism development	-	IEA	Process
GO:0008270	zinc ion binding	-	IEA	Function