EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRNOG00000012089 (Gene tree)
Gene ID: -
Gene Symbol: Cstf3
Alias: LOC362178|MGC156746
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 77003 bases
Position: chr3:94530586-94607588
Accession: 1305901
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000016318	Suf	PF05843.14	6e-83	1	1
ENSRNOP00000068083	Suf	PF05843.14	2.5e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000067860	-	253	-	ENSRNOP00000061864	38 (aa)	-	F1M3M6
ENSRNOT00000016318	-	2519	XM_008762067	ENSRNOP00000016318	625 (aa)	-	F1M4W7
ENSRNOT00000076438	-	930	-	ENSRNOP00000068083	279 (aa)	-	A0A096MJD1
ENSRNOT00000076762	-	603	-	ENSRNOP00000068217	201 (aa)	-	A0A096MJQ0

Gene Model

Click here to download ENSRNOG00000012089's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000012089's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000012089	Cstf3	100	99.200	ENSG00000176102	CSTF3	99	98.889	Homo_sapiens
ENSRNOG00000012089	Cstf3	100	90.880	ENSAPOG00000014054	cstf3	87	90.880	Acanthochromis_polyacanthus
ENSRNOG00000012089	Cstf3	100	99.040	ENSAMEG00000007187	CSTF3	87	99.040	Ailuropoda_melanoleuca
ENSRNOG00000012089	Cstf3	100	85.440	ENSACIG00000005539	cstf3	100	85.440	Amphilophus_citrinellus
ENSRNOG00000012089	Cstf3	100	90.560	ENSAOCG00000010930	cstf3	87	90.560	Amphiprion_ocellaris
ENSRNOG00000012089	Cstf3	100	90.560	ENSAPEG00000007903	cstf3	87	90.560	Amphiprion_percula
ENSRNOG00000012089	Cstf3	100	90.880	ENSATEG00000000190	cstf3	87	90.880	Anabas_testudineus
ENSRNOG00000012089	Cstf3	100	97.280	ENSAPLG00000007217	CSTF3	88	97.280	Anas_platyrhynchos
ENSRNOG00000012089	Cstf3	100	95.360	ENSACAG00000002823	CSTF3	87	95.360	Anolis_carolinensis
ENSRNOG00000012089	Cstf3	100	99.200	ENSANAG00000020699	CSTF3	100	99.200	Aotus_nancymaae
ENSRNOG00000012089	Cstf3	100	90.400	ENSACLG00000007820	cstf3	88	90.400	Astatotilapia_calliptera
ENSRNOG00000012089	Cstf3	100	91.840	ENSAMXG00000014198	cstf3	87	91.840	Astyanax_mexicanus
ENSRNOG00000012089	Cstf3	100	99.200	ENSBTAG00000008617	CSTF3	93	99.200	Bos_taurus
ENSRNOG00000012089	Cstf3	99	48.392	WBGene00006307	suf-1	89	48.392	Caenorhabditis_elegans
ENSRNOG00000012089	Cstf3	100	99.200	ENSCJAG00000005533	CSTF3	100	99.200	Callithrix_jacchus
ENSRNOG00000012089	Cstf3	100	99.200	ENSCAFG00000007264	CSTF3	87	99.200	Canis_familiaris
ENSRNOG00000012089	Cstf3	100	99.200	ENSCAFG00020002715	CSTF3	89	99.200	Canis_lupus_dingo
ENSRNOG00000012089	Cstf3	100	99.200	ENSCHIG00000016418	CSTF3	100	99.200	Capra_hircus
ENSRNOG00000012089	Cstf3	100	98.720	ENSTSYG00000000451	CSTF3	100	98.720	Carlito_syrichta
ENSRNOG00000012089	Cstf3	90	96.023	ENSCAPG00000010958	CSTF3	93	96.023	Cavia_aperea
ENSRNOG00000012089	Cstf3	100	98.880	ENSCPOG00000005545	CSTF3	88	98.880	Cavia_porcellus
ENSRNOG00000012089	Cstf3	100	99.200	ENSCCAG00000024790	CSTF3	100	99.200	Cebus_capucinus
ENSRNOG00000012089	Cstf3	100	99.200	ENSCATG00000007080	CSTF3	100	99.200	Cercocebus_atys
ENSRNOG00000012089	Cstf3	100	99.200	ENSCLAG00000016179	CSTF3	87	99.200	Chinchilla_lanigera
ENSRNOG00000012089	Cstf3	76	100.000	ENSCHOG00000002497	CSTF3	67	100.000	Choloepus_hoffmanni
ENSRNOG00000012089	Cstf3	100	97.120	ENSCPBG00000006753	CSTF3	87	97.120	Chrysemys_picta_bellii
ENSRNOG00000012089	Cstf3	100	61.769	ENSCING00000006401	-	87	61.769	Ciona_intestinalis
ENSRNOG00000012089	Cstf3	100	60.849	ENSCSAVG00000004851	-	89	60.849	Ciona_savignyi
ENSRNOG00000012089	Cstf3	100	99.200	ENSCANG00000035468	CSTF3	100	99.200	Colobus_angolensis_palliatus
ENSRNOG00000012089	Cstf3	100	99.680	ENSCGRG00001014773	Cstf3	87	99.680	Cricetulus_griseus_chok1gshd
ENSRNOG00000012089	Cstf3	100	99.680	ENSCGRG00000004142	Cstf3	87	99.680	Cricetulus_griseus_crigri
ENSRNOG00000012089	Cstf3	100	90.560	ENSCSEG00000014283	cstf3	87	90.560	Cynoglossus_semilaevis
ENSRNOG00000012089	Cstf3	100	89.760	ENSCVAG00000019739	cstf3	87	89.760	Cyprinodon_variegatus
ENSRNOG00000012089	Cstf3	100	90.240	ENSDARG00000018904	cstf3	87	90.240	Danio_rerio
ENSRNOG00000012089	Cstf3	100	98.720	ENSDNOG00000007366	CSTF3	87	98.720	Dasypus_novemcinctus
ENSRNOG00000012089	Cstf3	100	92.320	ENSDORG00000005898	Cstf3	87	92.320	Dipodomys_ordii
ENSRNOG00000012089	Cstf3	99	57.805	FBgn0003559	su(f)	87	57.805	Drosophila_melanogaster
ENSRNOG00000012089	Cstf3	96	98.829	ENSETEG00000017097	CSTF3	83	98.829	Echinops_telfairi
ENSRNOG00000012089	Cstf3	86	74.768	ENSEBUG00000015459	cstf3	86	74.768	Eptatretus_burgeri
ENSRNOG00000012089	Cstf3	100	99.360	ENSEASG00005019884	CSTF3	89	99.360	Equus_asinus_asinus
ENSRNOG00000012089	Cstf3	100	99.360	ENSECAG00000023338	CSTF3	89	99.360	Equus_caballus
ENSRNOG00000012089	Cstf3	100	92.640	ENSEEUG00000015167	CSTF3	87	92.640	Erinaceus_europaeus
ENSRNOG00000012089	Cstf3	100	89.280	ENSELUG00000023393	cstf3	87	89.280	Esox_lucius
ENSRNOG00000012089	Cstf3	100	99.040	ENSFCAG00000030711	CSTF3	87	99.040	Felis_catus
ENSRNOG00000012089	Cstf3	100	97.120	ENSFALG00000010764	CSTF3	96	97.120	Ficedula_albicollis
ENSRNOG00000012089	Cstf3	100	99.040	ENSFDAG00000012082	CSTF3	87	99.040	Fukomys_damarensis
ENSRNOG00000012089	Cstf3	100	89.920	ENSFHEG00000020623	cstf3	87	89.920	Fundulus_heteroclitus
ENSRNOG00000012089	Cstf3	100	88.978	ENSGMOG00000012275	cstf3	87	88.978	Gadus_morhua
ENSRNOG00000012089	Cstf3	100	97.440	ENSGALG00000011685	CSTF3	87	97.440	Gallus_gallus
ENSRNOG00000012089	Cstf3	100	90.240	ENSGAFG00000002181	cstf3	87	90.240	Gambusia_affinis
ENSRNOG00000012089	Cstf3	100	90.080	ENSGACG00000015997	cstf3	87	90.080	Gasterosteus_aculeatus
ENSRNOG00000012089	Cstf3	100	97.120	ENSGAGG00000006200	CSTF3	87	97.120	Gopherus_agassizii
ENSRNOG00000012089	Cstf3	100	94.240	ENSGGOG00000026591	CSTF3	89	94.240	Gorilla_gorilla
ENSRNOG00000012089	Cstf3	100	90.400	ENSHBUG00000016656	cstf3	88	90.400	Haplochromis_burtoni
ENSRNOG00000012089	Cstf3	100	98.880	ENSHGLG00000017834	CSTF3	87	98.880	Heterocephalus_glaber_female
ENSRNOG00000012089	Cstf3	100	98.880	ENSHGLG00100018042	CSTF3	88	98.880	Heterocephalus_glaber_male
ENSRNOG00000012089	Cstf3	100	89.600	ENSHCOG00000015218	cstf3	88	89.600	Hippocampus_comes
ENSRNOG00000012089	Cstf3	100	90.080	ENSIPUG00000013170	CSTF3	88	90.080	Ictalurus_punctatus
ENSRNOG00000012089	Cstf3	100	99.200	ENSSTOG00000013306	CSTF3	87	99.200	Ictidomys_tridecemlineatus
ENSRNOG00000012089	Cstf3	100	85.920	ENSJJAG00000018430	Cstf3	86	85.920	Jaculus_jaculus
ENSRNOG00000012089	Cstf3	100	89.760	ENSKMAG00000010916	cstf3	87	89.760	Kryptolebias_marmoratus
ENSRNOG00000012089	Cstf3	100	89.600	ENSLBEG00000002306	cstf3	87	89.600	Labrus_bergylta
ENSRNOG00000012089	Cstf3	100	93.280	ENSLACG00000017296	CSTF3	87	93.280	Latimeria_chalumnae
ENSRNOG00000012089	Cstf3	100	92.480	ENSLOCG00000004415	cstf3	87	92.480	Lepisosteus_oculatus
ENSRNOG00000012089	Cstf3	100	98.880	ENSLAFG00000008712	CSTF3	87	98.880	Loxodonta_africana
ENSRNOG00000012089	Cstf3	100	99.200	ENSMFAG00000029516	CSTF3	100	99.200	Macaca_fascicularis
ENSRNOG00000012089	Cstf3	100	99.200	ENSMMUG00000002542	CSTF3	87	99.200	Macaca_mulatta
ENSRNOG00000012089	Cstf3	100	99.200	ENSMNEG00000021807	CSTF3	100	99.200	Macaca_nemestrina
ENSRNOG00000012089	Cstf3	100	99.200	ENSMLEG00000039594	CSTF3	100	99.200	Mandrillus_leucophaeus
ENSRNOG00000012089	Cstf3	100	90.400	ENSMAMG00000020423	cstf3	88	90.400	Mastacembelus_armatus
ENSRNOG00000012089	Cstf3	100	90.400	ENSMZEG00005012082	cstf3	89	90.400	Maylandia_zebra
ENSRNOG00000012089	Cstf3	100	97.440	ENSMGAG00000001383	CSTF3	88	96.975	Meleagris_gallopavo
ENSRNOG00000012089	Cstf3	100	99.520	ENSMAUG00000002487	Cstf3	87	99.520	Mesocricetus_auratus
ENSRNOG00000012089	Cstf3	100	98.880	ENSMICG00000004784	CSTF3	100	98.880	Microcebus_murinus
ENSRNOG00000012089	Cstf3	100	99.680	ENSMOCG00000017583	Cstf3	87	99.680	Microtus_ochrogaster
ENSRNOG00000012089	Cstf3	100	90.240	ENSMMOG00000016026	cstf3	83	90.240	Mola_mola
ENSRNOG00000012089	Cstf3	100	98.240	ENSMODG00000009745	-	87	98.240	Monodelphis_domestica
ENSRNOG00000012089	Cstf3	100	84.160	ENSMODG00000025205	-	87	84.160	Monodelphis_domestica
ENSRNOG00000012089	Cstf3	100	90.240	ENSMALG00000012050	cstf3	87	90.240	Monopterus_albus
ENSRNOG00000012089	Cstf3	100	99.680	MGP_CAROLIEiJ_G0024026	Cstf3	87	99.680	Mus_caroli
ENSRNOG00000012089	Cstf3	100	99.680	ENSMUSG00000027176	Cstf3	87	99.680	Mus_musculus
ENSRNOG00000012089	Cstf3	100	99.680	MGP_PahariEiJ_G0025464	Cstf3	87	99.680	Mus_pahari
ENSRNOG00000012089	Cstf3	100	99.680	MGP_SPRETEiJ_G0024939	Cstf3	87	99.680	Mus_spretus
ENSRNOG00000012089	Cstf3	100	99.040	ENSMPUG00000011457	CSTF3	87	99.040	Mustela_putorius_furo
ENSRNOG00000012089	Cstf3	100	98.880	ENSMLUG00000003073	-	87	98.880	Myotis_lucifugus
ENSRNOG00000012089	Cstf3	100	95.680	ENSMLUG00000026022	-	87	95.680	Myotis_lucifugus
ENSRNOG00000012089	Cstf3	100	99.360	ENSNGAG00000010677	Cstf3	88	99.360	Nannospalax_galili
ENSRNOG00000012089	Cstf3	100	90.400	ENSNBRG00000007345	cstf3	100	90.400	Neolamprologus_brichardi
ENSRNOG00000012089	Cstf3	100	99.200	ENSNLEG00000017901	CSTF3	100	99.200	Nomascus_leucogenys
ENSRNOG00000012089	Cstf3	81	94.071	ENSMEUG00000005640	-	97	94.071	Notamacropus_eugenii
ENSRNOG00000012089	Cstf3	61	99.412	ENSOPRG00000000199	-	57	94.958	Ochotona_princeps
ENSRNOG00000012089	Cstf3	99	88.226	ENSODEG00000006311	-	95	88.226	Octodon_degus
ENSRNOG00000012089	Cstf3	100	99.040	ENSODEG00000016737	-	89	99.040	Octodon_degus
ENSRNOG00000012089	Cstf3	100	90.400	ENSONIG00000005563	cstf3	87	90.400	Oreochromis_niloticus
ENSRNOG00000012089	Cstf3	100	97.289	ENSOANG00000015140	CSTF3	96	97.289	Ornithorhynchus_anatinus
ENSRNOG00000012089	Cstf3	100	98.880	ENSOCUG00000015417	CSTF3	87	98.880	Oryctolagus_cuniculus
ENSRNOG00000012089	Cstf3	100	90.080	ENSORLG00000009762	cstf3	87	90.080	Oryzias_latipes
ENSRNOG00000012089	Cstf3	100	90.080	ENSORLG00020005540	cstf3	88	90.080	Oryzias_latipes_hni
ENSRNOG00000012089	Cstf3	100	89.920	ENSORLG00015003551	cstf3	89	89.920	Oryzias_latipes_hsok
ENSRNOG00000012089	Cstf3	100	89.600	ENSOMEG00000003848	cstf3	91	89.600	Oryzias_melastigma
ENSRNOG00000012089	Cstf3	100	98.567	ENSOGAG00000010229	CSTF3	87	98.567	Otolemur_garnettii
ENSRNOG00000012089	Cstf3	100	99.200	ENSOARG00000017271	CSTF3	96	99.200	Ovis_aries
ENSRNOG00000012089	Cstf3	100	96.800	ENSPPAG00000027358	CSTF3	89	96.800	Pan_paniscus
ENSRNOG00000012089	Cstf3	100	99.040	ENSPPRG00000016852	CSTF3	87	99.040	Panthera_pardus
ENSRNOG00000012089	Cstf3	100	99.040	ENSPTIG00000008716	CSTF3	87	99.040	Panthera_tigris_altaica
ENSRNOG00000012089	Cstf3	100	99.200	ENSPTRG00000003485	CSTF3	89	97.440	Pan_troglodytes
ENSRNOG00000012089	Cstf3	100	99.200	ENSPANG00000013722	CSTF3	88	99.200	Papio_anubis
ENSRNOG00000012089	Cstf3	100	91.680	ENSPKIG00000023648	cstf3	87	91.680	Paramormyrops_kingsleyae
ENSRNOG00000012089	Cstf3	100	96.640	ENSPSIG00000009173	CSTF3	87	96.640	Pelodiscus_sinensis
ENSRNOG00000012089	Cstf3	85	92.797	ENSPMGG00000000164	cstf3	83	94.945	Periophthalmus_magnuspinnatus
ENSRNOG00000012089	Cstf3	100	99.520	ENSPEMG00000011481	Cstf3	87	99.520	Peromyscus_maniculatus_bairdii
ENSRNOG00000012089	Cstf3	100	81.081	ENSPMAG00000007282	cstf3	87	81.081	Petromyzon_marinus
ENSRNOG00000012089	Cstf3	100	80.831	ENSPCIG00000030419	-	78	81.629	Phascolarctos_cinereus
ENSRNOG00000012089	Cstf3	100	97.440	ENSPCIG00000026406	-	100	97.440	Phascolarctos_cinereus
ENSRNOG00000012089	Cstf3	100	90.400	ENSPFOG00000017239	cstf3	87	90.400	Poecilia_formosa
ENSRNOG00000012089	Cstf3	100	90.400	ENSPLAG00000009456	cstf3	87	90.400	Poecilia_latipinna
ENSRNOG00000012089	Cstf3	100	90.400	ENSPMEG00000010320	cstf3	87	90.400	Poecilia_mexicana
ENSRNOG00000012089	Cstf3	100	90.400	ENSPREG00000013549	cstf3	88	90.400	Poecilia_reticulata
ENSRNOG00000012089	Cstf3	100	99.200	ENSPPYG00000003375	CSTF3	87	99.200	Pongo_abelii
ENSRNOG00000012089	Cstf3	67	100.000	ENSPCAG00000008025	-	58	100.000	Procavia_capensis
ENSRNOG00000012089	Cstf3	100	94.720	ENSPCOG00000014417	CSTF3	88	94.720	Propithecus_coquereli
ENSRNOG00000012089	Cstf3	100	94.880	ENSPVAG00000002350	CSTF3	87	94.880	Pteropus_vampyrus
ENSRNOG00000012089	Cstf3	100	90.400	ENSPNYG00000018259	cstf3	89	90.400	Pundamilia_nyererei
ENSRNOG00000012089	Cstf3	100	91.360	ENSPNAG00000020182	cstf3	100	84.000	Pygocentrus_nattereri
ENSRNOG00000012089	Cstf3	100	99.200	ENSRBIG00000044258	CSTF3	100	99.200	Rhinopithecus_bieti
ENSRNOG00000012089	Cstf3	100	99.200	ENSRROG00000043450	CSTF3	100	99.200	Rhinopithecus_roxellana
ENSRNOG00000012089	Cstf3	100	99.200	ENSSBOG00000024764	CSTF3	100	99.200	Saimiri_boliviensis_boliviensis
ENSRNOG00000012089	Cstf3	100	98.080	ENSSHAG00000018128	-	87	98.080	Sarcophilus_harrisii
ENSRNOG00000012089	Cstf3	100	85.280	ENSSHAG00000003135	-	86	85.280	Sarcophilus_harrisii
ENSRNOG00000012089	Cstf3	100	91.520	ENSSFOG00015022133	cstf3	87	91.520	Scleropages_formosus
ENSRNOG00000012089	Cstf3	100	89.920	ENSSMAG00000002197	cstf3	87	89.920	Scophthalmus_maximus
ENSRNOG00000012089	Cstf3	100	90.720	ENSSDUG00000020426	cstf3	87	90.720	Seriola_dumerili
ENSRNOG00000012089	Cstf3	100	90.720	ENSSLDG00000025649	cstf3	91	90.720	Seriola_lalandi_dorsalis
ENSRNOG00000012089	Cstf3	100	98.880	ENSSARG00000000391	CSTF3	87	98.880	Sorex_araneus
ENSRNOG00000012089	Cstf3	100	96.320	ENSSPUG00000010546	CSTF3	90	96.320	Sphenodon_punctatus
ENSRNOG00000012089	Cstf3	100	90.720	ENSSPAG00000004958	cstf3	87	90.720	Stegastes_partitus
ENSRNOG00000012089	Cstf3	100	99.040	ENSSSCG00000040954	CSTF3	87	99.040	Sus_scrofa
ENSRNOG00000012089	Cstf3	100	97.120	ENSTGUG00000005010	CSTF3	88	97.120	Taeniopygia_guttata
ENSRNOG00000012089	Cstf3	100	89.440	ENSTRUG00000004959	cstf3	90	87.200	Takifugu_rubripes
ENSRNOG00000012089	Cstf3	100	89.920	ENSTNIG00000013811	cstf3	87	89.920	Tetraodon_nigroviridis
ENSRNOG00000012089	Cstf3	100	95.520	ENSTBEG00000001544	CSTF3	88	95.520	Tupaia_belangeri
ENSRNOG00000012089	Cstf3	100	95.840	ENSTTRG00000016366	CSTF3	87	95.840	Tursiops_truncatus
ENSRNOG00000012089	Cstf3	100	98.880	ENSUMAG00000018971	CSTF3	100	98.880	Ursus_maritimus
ENSRNOG00000012089	Cstf3	100	99.040	ENSVPAG00000007800	CSTF3	87	99.040	Vicugna_pacos
ENSRNOG00000012089	Cstf3	100	99.200	ENSVVUG00000014938	CSTF3	100	99.200	Vulpes_vulpes
ENSRNOG00000012089	Cstf3	97	79.837	ENSXETG00000021399	cstf3	99	79.869	Xenopus_tropicalis
ENSRNOG00000012089	Cstf3	56	52.532	ENSXETG00000017946	-	82	35.768	Xenopus_tropicalis
ENSRNOG00000012089	Cstf3	100	89.920	ENSXCOG00000011741	cstf3	100	89.920	Xiphophorus_couchianus
ENSRNOG00000012089	Cstf3	100	90.400	ENSXMAG00000009545	cstf3	87	90.400	Xiphophorus_maculatus