EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000012240 (Gene tree)
Gene ID: 303281
Gene Symbol: Supt6h
Alias: LOC303281
Full Name: SPT6 homolog%2C histone chaperone
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 37111 bases
Position: chr10:65470471-65507581
Accession: 1309290
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000071467	S1	PF00575.23	1.1e-06	1	1
ENSRNOP00000016759	S1	PF00575.23	1.1e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000016759	-	6434	XM_008768008	ENSRNOP00000016759	1726 (aa)	XP_008766230	F1LR36
ENSRNOT00000089615	-	5510	XM_008768006	ENSRNOP00000071467	1725 (aa)	XP_008766228	A0A0G2K0J0

Gene Model

Click here to download ENSRNOG00000012240's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000012240's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000012240	Supt6h	100	98.378	ENSG00000109111	SUPT6H	100	98.378	Homo_sapiens
ENSRNOG00000012240	Supt6h	89	80.169	ENSAPOG00000019366	supt6h	95	80.208	Acanthochromis_polyacanthus
ENSRNOG00000012240	Supt6h	100	98.494	ENSAMEG00000004744	SUPT6H	100	98.494	Ailuropoda_melanoleuca
ENSRNOG00000012240	Supt6h	88	80.971	ENSACIG00000004887	supt6h	96	80.840	Amphilophus_citrinellus
ENSRNOG00000012240	Supt6h	98	76.529	ENSAOCG00000007013	supt6h	100	74.036	Amphiprion_ocellaris
ENSRNOG00000012240	Supt6h	98	76.339	ENSAPEG00000018434	supt6h	100	73.978	Amphiprion_percula
ENSRNOG00000012240	Supt6h	89	78.461	ENSATEG00000006950	supt6h	93	78.044	Anabas_testudineus
ENSRNOG00000012240	Supt6h	100	92.152	ENSAPLG00000001319	SUPT6H	100	92.960	Anas_platyrhynchos
ENSRNOG00000012240	Supt6h	100	98.039	ENSANAG00000029355	SUPT6H	100	98.039	Aotus_nancymaae
ENSRNOG00000012240	Supt6h	89	80.749	ENSACLG00000005753	supt6h	96	80.749	Astatotilapia_calliptera
ENSRNOG00000012240	Supt6h	92	82.481	ENSAMXG00000006025	supt6h	94	80.072	Astyanax_mexicanus
ENSRNOG00000012240	Supt6h	100	98.030	ENSBTAG00000009036	SUPT6H	100	98.030	Bos_taurus
ENSRNOG00000012240	Supt6h	78	38.529	WBGene00001259	emb-5	87	38.081	Caenorhabditis_elegans
ENSRNOG00000012240	Supt6h	99	96.694	ENSCJAG00000012982	SUPT6H	99	96.694	Callithrix_jacchus
ENSRNOG00000012240	Supt6h	100	98.610	ENSCAFG00000018763	SUPT6H	100	98.610	Canis_familiaris
ENSRNOG00000012240	Supt6h	100	98.610	ENSCAFG00020011752	SUPT6H	100	98.610	Canis_lupus_dingo
ENSRNOG00000012240	Supt6h	100	97.798	ENSCHIG00000025101	SUPT6H	100	97.798	Capra_hircus
ENSRNOG00000012240	Supt6h	100	98.552	ENSTSYG00000004539	SUPT6H	100	98.552	Carlito_syrichta
ENSRNOG00000012240	Supt6h	96	82.091	ENSCAPG00000016785	SUPT6H	98	92.593	Cavia_aperea
ENSRNOG00000012240	Supt6h	100	98.320	ENSCPOG00000001442	SUPT6H	100	98.320	Cavia_porcellus
ENSRNOG00000012240	Supt6h	100	98.494	ENSCCAG00000031442	SUPT6H	100	98.494	Cebus_capucinus
ENSRNOG00000012240	Supt6h	100	98.436	ENSCATG00000041242	SUPT6H	100	98.436	Cercocebus_atys
ENSRNOG00000012240	Supt6h	100	98.320	ENSCLAG00000006422	SUPT6H	100	98.320	Chinchilla_lanigera
ENSRNOG00000012240	Supt6h	84	98.016	ENSCSAG00000007178	SUPT6H	92	98.016	Chlorocebus_sabaeus
ENSRNOG00000012240	Supt6h	100	92.994	ENSCPBG00000020288	SUPT6H	100	93.746	Chrysemys_picta_bellii
ENSRNOG00000012240	Supt6h	100	98.378	ENSCANG00000026929	SUPT6H	100	98.378	Colobus_angolensis_palliatus
ENSRNOG00000012240	Supt6h	100	99.362	ENSCGRG00000008708	Supt6	100	99.362	Cricetulus_griseus_crigri
ENSRNOG00000012240	Supt6h	89	78.497	ENSCSEG00000018147	supt6h	99	78.456	Cynoglossus_semilaevis
ENSRNOG00000012240	Supt6h	89	80.934	ENSCVAG00000021195	supt6h	100	80.610	Cyprinodon_variegatus
ENSRNOG00000012240	Supt6h	97	80.035	ENSDARG00000006524	supt6h	100	78.779	Danio_rerio
ENSRNOG00000012240	Supt6h	100	98.436	ENSDNOG00000019476	SUPT6H	100	98.436	Dasypus_novemcinctus
ENSRNOG00000012240	Supt6h	95	47.271	FBgn0028982	Spt6	87	48.562	Drosophila_melanogaster
ENSRNOG00000012240	Supt6h	100	98.494	ENSEASG00005009905	SUPT6H	100	98.494	Equus_asinus_asinus
ENSRNOG00000012240	Supt6h	100	98.494	ENSECAG00000020521	SUPT6H	100	98.494	Equus_caballus
ENSRNOG00000012240	Supt6h	63	100.000	ENSEEUG00000008265	-	61	100.000	Erinaceus_europaeus
ENSRNOG00000012240	Supt6h	88	80.797	ENSELUG00000005639	supt6h	94	80.651	Esox_lucius
ENSRNOG00000012240	Supt6h	92	80.000	ENSELUG00000022246	SUPT6H	96	81.044	Esox_lucius
ENSRNOG00000012240	Supt6h	100	98.667	ENSFCAG00000004014	SUPT6H	100	98.667	Felis_catus
ENSRNOG00000012240	Supt6h	100	91.898	ENSFALG00000006393	SUPT6H	100	91.898	Ficedula_albicollis
ENSRNOG00000012240	Supt6h	100	98.030	ENSFDAG00000016453	SUPT6H	100	98.030	Fukomys_damarensis
ENSRNOG00000012240	Supt6h	100	75.633	ENSFHEG00000004556	supt6h	100	75.833	Fundulus_heteroclitus
ENSRNOG00000012240	Supt6h	97	75.177	ENSGMOG00000007109	supt6h	100	74.670	Gadus_morhua
ENSRNOG00000012240	Supt6h	100	92.072	ENSGALG00000000146	SUPT6H	100	93.002	Gallus_gallus
ENSRNOG00000012240	Supt6h	92	80.528	ENSGAFG00000000803	supt6h	96	80.934	Gambusia_affinis
ENSRNOG00000012240	Supt6h	100	76.716	ENSGACG00000020513	supt6h	100	78.916	Gasterosteus_aculeatus
ENSRNOG00000012240	Supt6h	100	92.936	ENSGAGG00000016728	SUPT6H	100	93.688	Gopherus_agassizii
ENSRNOG00000012240	Supt6h	100	98.494	ENSGGOG00000016688	SUPT6H	100	98.494	Gorilla_gorilla
ENSRNOG00000012240	Supt6h	89	81.011	ENSHBUG00000021694	supt6h	96	81.051	Haplochromis_burtoni
ENSRNOG00000012240	Supt6h	100	98.378	ENSHGLG00000018764	SUPT6H	100	98.378	Heterocephalus_glaber_female
ENSRNOG00000012240	Supt6h	100	98.320	ENSHGLG00100018216	SUPT6H	100	98.320	Heterocephalus_glaber_male
ENSRNOG00000012240	Supt6h	97	79.623	ENSIPUG00000024533	supt6h	100	78.881	Ictalurus_punctatus
ENSRNOG00000012240	Supt6h	100	98.320	ENSSTOG00000000577	SUPT6H	100	98.320	Ictidomys_tridecemlineatus
ENSRNOG00000012240	Supt6h	100	98.725	ENSJJAG00000013309	Supt6	100	98.725	Jaculus_jaculus
ENSRNOG00000012240	Supt6h	100	75.491	ENSKMAG00000019294	supt6h	95	77.310	Kryptolebias_marmoratus
ENSRNOG00000012240	Supt6h	96	76.643	ENSLBEG00000027907	supt6h	96	77.126	Labrus_bergylta
ENSRNOG00000012240	Supt6h	100	85.541	ENSLACG00000003186	SUPT6H	100	85.252	Latimeria_chalumnae
ENSRNOG00000012240	Supt6h	100	98.378	ENSLAFG00000017945	SUPT6H	100	98.378	Loxodonta_africana
ENSRNOG00000012240	Supt6h	100	98.436	ENSMFAG00000040784	SUPT6H	100	98.436	Macaca_fascicularis
ENSRNOG00000012240	Supt6h	100	98.436	ENSMMUG00000004708	SUPT6H	100	98.436	Macaca_mulatta
ENSRNOG00000012240	Supt6h	98	98.520	ENSMLEG00000030076	SUPT6H	100	99.848	Mandrillus_leucophaeus
ENSRNOG00000012240	Supt6h	100	75.930	ENSMAMG00000020232	supt6h	99	77.778	Mastacembelus_armatus
ENSRNOG00000012240	Supt6h	89	80.749	ENSMZEG00005024774	supt6h	96	80.749	Maylandia_zebra
ENSRNOG00000012240	Supt6h	100	92.708	ENSMGAG00000005881	SUPT6H	100	93.056	Meleagris_gallopavo
ENSRNOG00000012240	Supt6h	100	99.073	ENSMAUG00000012146	Supt6	100	99.073	Mesocricetus_auratus
ENSRNOG00000012240	Supt6h	100	97.807	ENSMICG00000016884	SUPT6H	100	97.807	Microcebus_murinus
ENSRNOG00000012240	Supt6h	100	99.247	ENSMOCG00000021959	Supt6	100	99.247	Microtus_ochrogaster
ENSRNOG00000012240	Supt6h	88	80.774	ENSMMOG00000010942	supt6h	94	80.696	Mola_mola
ENSRNOG00000012240	Supt6h	100	96.414	ENSMODG00000019291	SUPT6H	100	96.414	Monodelphis_domestica
ENSRNOG00000012240	Supt6h	85	80.475	ENSMALG00000000093	supt6h	93	79.341	Monopterus_albus
ENSRNOG00000012240	Supt6h	100	99.652	MGP_CAROLIEiJ_G0016796	Supt6	100	99.652	Mus_caroli
ENSRNOG00000012240	Supt6h	100	99.594	ENSMUSG00000002052	Supt6	100	99.594	Mus_musculus
ENSRNOG00000012240	Supt6h	100	97.565	MGP_PahariEiJ_G0017933	Supt6	100	97.565	Mus_pahari
ENSRNOG00000012240	Supt6h	100	99.594	MGP_SPRETEiJ_G0017639	Supt6	100	99.594	Mus_spretus
ENSRNOG00000012240	Supt6h	100	98.610	ENSMPUG00000014195	SUPT6H	100	98.610	Mustela_putorius_furo
ENSRNOG00000012240	Supt6h	100	97.914	ENSMLUG00000012423	SUPT6H	100	97.914	Myotis_lucifugus
ENSRNOG00000012240	Supt6h	100	98.436	ENSNGAG00000012801	Supt6	100	98.436	Nannospalax_galili
ENSRNOG00000012240	Supt6h	84	81.092	ENSNBRG00000001035	supt6h	95	79.530	Neolamprologus_brichardi
ENSRNOG00000012240	Supt6h	100	95.944	ENSNLEG00000002730	SUPT6H	100	99.544	Nomascus_leucogenys
ENSRNOG00000012240	Supt6h	91	92.015	ENSMEUG00000009404	SUPT6H	91	91.762	Notamacropus_eugenii
ENSRNOG00000012240	Supt6h	100	98.146	ENSOPRG00000012549	SUPT6H	100	98.146	Ochotona_princeps
ENSRNOG00000012240	Supt6h	100	97.972	ENSODEG00000011930	SUPT6H	100	97.972	Octodon_degus
ENSRNOG00000012240	Supt6h	89	80.968	ENSONIG00000005512	supt6h	100	77.854	Oreochromis_niloticus
ENSRNOG00000012240	Supt6h	100	98.207	ENSOCUG00000000848	SUPT6H	100	98.207	Oryctolagus_cuniculus
ENSRNOG00000012240	Supt6h	88	81.143	ENSORLG00000003098	supt6h	91	81.012	Oryzias_latipes
ENSRNOG00000012240	Supt6h	89	79.074	ENSORLG00020016222	supt6h	94	78.005	Oryzias_latipes_hni
ENSRNOG00000012240	Supt6h	89	79.074	ENSORLG00015021046	supt6h	94	78.005	Oryzias_latipes_hsok
ENSRNOG00000012240	Supt6h	92	77.989	ENSOMEG00000010277	supt6h	94	77.338	Oryzias_melastigma
ENSRNOG00000012240	Supt6h	100	94.560	ENSOGAG00000012089	SUPT6H	100	94.560	Otolemur_garnettii
ENSRNOG00000012240	Supt6h	100	96.649	ENSOARG00000002727	SUPT6H	100	96.649	Ovis_aries
ENSRNOG00000012240	Supt6h	100	98.436	ENSPPAG00000036720	SUPT6H	100	98.436	Pan_paniscus
ENSRNOG00000012240	Supt6h	100	98.494	ENSPPRG00000024588	SUPT6H	100	98.494	Panthera_pardus
ENSRNOG00000012240	Supt6h	100	97.288	ENSPTIG00000014860	SUPT6H	100	97.288	Panthera_tigris_altaica
ENSRNOG00000012240	Supt6h	100	98.436	ENSPTRG00000008929	SUPT6H	100	98.436	Pan_troglodytes
ENSRNOG00000012240	Supt6h	100	95.307	ENSPANG00000023444	SUPT6H	100	95.307	Papio_anubis
ENSRNOG00000012240	Supt6h	97	81.850	ENSPKIG00000013468	supt6h	99	79.889	Paramormyrops_kingsleyae
ENSRNOG00000012240	Supt6h	100	99.015	ENSPEMG00000009972	Supt6	100	99.015	Peromyscus_maniculatus_bairdii
ENSRNOG00000012240	Supt6h	100	96.472	ENSPCIG00000017943	SUPT6H	100	96.472	Phascolarctos_cinereus
ENSRNOG00000012240	Supt6h	100	76.404	ENSPFOG00000011171	supt6h	94	77.984	Poecilia_formosa
ENSRNOG00000012240	Supt6h	89	80.039	ENSPLAG00000005137	supt6h	95	80.207	Poecilia_latipinna
ENSRNOG00000012240	Supt6h	100	76.348	ENSPMEG00000013302	supt6h	94	77.924	Poecilia_mexicana
ENSRNOG00000012240	Supt6h	100	75.969	ENSPREG00000009725	supt6h	94	77.924	Poecilia_reticulata
ENSRNOG00000012240	Supt6h	96	99.876	ENSPPYG00000008105	SUPT6H	100	99.876	Pongo_abelii
ENSRNOG00000012240	Supt6h	100	95.788	ENSPCOG00000021329	SUPT6H	100	99.848	Propithecus_coquereli
ENSRNOG00000012240	Supt6h	89	80.764	ENSPNYG00000017271	supt6h	96	80.804	Pundamilia_nyererei
ENSRNOG00000012240	Supt6h	88	83.496	ENSPNAG00000015154	supt6h	94	82.975	Pygocentrus_nattereri
ENSRNOG00000012240	Supt6h	100	98.378	ENSRBIG00000015392	SUPT6H	100	98.378	Rhinopithecus_bieti
ENSRNOG00000012240	Supt6h	100	98.378	ENSRROG00000035461	SUPT6H	100	98.378	Rhinopithecus_roxellana
ENSRNOG00000012240	Supt6h	100	93.175	ENSSBOG00000028535	SUPT6H	100	99.848	Saimiri_boliviensis_boliviensis
ENSRNOG00000012240	Supt6h	100	96.420	ENSSHAG00000014414	SUPT6H	100	96.949	Sarcophilus_harrisii
ENSRNOG00000012240	Supt6h	95	80.829	ENSSFOG00015005320	supt6h	98	78.352	Scleropages_formosus
ENSRNOG00000012240	Supt6h	89	78.023	ENSSMAG00000000771	supt6h	100	75.521	Scophthalmus_maximus
ENSRNOG00000012240	Supt6h	85	81.187	ENSSDUG00000016786	supt6h	90	79.895	Seriola_dumerili
ENSRNOG00000012240	Supt6h	85	79.434	ENSSLDG00000014842	supt6h	89	78.193	Seriola_lalandi_dorsalis
ENSRNOG00000012240	Supt6h	100	95.599	ENSSARG00000006988	SUPT6H	100	95.599	Sorex_araneus
ENSRNOG00000012240	Supt6h	100	92.250	ENSSPUG00000006119	SUPT6H	100	92.770	Sphenodon_punctatus
ENSRNOG00000012240	Supt6h	94	79.006	ENSSPAG00000016590	supt6h	95	80.415	Stegastes_partitus
ENSRNOG00000012240	Supt6h	93	98.690	ENSSSCG00000017773	SUPT6H	100	98.690	Sus_scrofa
ENSRNOG00000012240	Supt6h	100	91.850	ENSTGUG00000006101	SUPT6H	100	91.618	Taeniopygia_guttata
ENSRNOG00000012240	Supt6h	100	75.226	ENSTRUG00000014399	supt6h	100	74.972	Takifugu_rubripes
ENSRNOG00000012240	Supt6h	100	75.385	ENSTNIG00000016157	supt6h	100	74.044	Tetraodon_nigroviridis
ENSRNOG00000012240	Supt6h	98	87.893	ENSTBEG00000001874	SUPT6H	97	87.843	Tupaia_belangeri
ENSRNOG00000012240	Supt6h	100	97.685	ENSTTRG00000004092	SUPT6H	100	97.685	Tursiops_truncatus
ENSRNOG00000012240	Supt6h	100	98.552	ENSUAMG00000003188	SUPT6H	100	98.552	Ursus_americanus
ENSRNOG00000012240	Supt6h	100	98.320	ENSUMAG00000011783	SUPT6H	100	98.320	Ursus_maritimus
ENSRNOG00000012240	Supt6h	100	98.610	ENSVVUG00000017049	SUPT6H	100	98.610	Vulpes_vulpes
ENSRNOG00000012240	Supt6h	97	81.909	ENSXETG00000019265	supt6h	97	82.086	Xenopus_tropicalis
ENSRNOG00000012240	Supt6h	89	80.349	ENSXMAG00000014242	supt6h	95	80.777	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001825	blastocyst formation	-	IEA	Process
GO:0001825	blastocyst formation	-	ISO	Process
GO:0003677	DNA binding	-	IEA	Function
GO:0006368	transcription elongation from RNA polymerase II promoter	21873635.	IBA	Process
GO:0008023	transcription elongation factor complex	21873635.	IBA	Component
GO:0010793	regulation of mRNA export from nucleus	-	IEA	Process
GO:0010793	regulation of mRNA export from nucleus	-	ISO	Process
GO:0031491	nucleosome binding	21873635.	IBA	Function
GO:0032968	positive regulation of transcription elongation from RNA polymerase II promoter	21873635.	IBA	Process
GO:0032968	positive regulation of transcription elongation from RNA polymerase II promoter	-	ISO	Process
GO:0034728	nucleosome organization	21873635.	IBA	Process
GO:0035327	transcriptionally active chromatin	21873635.	IBA	Component
GO:0042393	histone binding	21873635.	IBA	Function
GO:0042393	histone binding	-	ISO	Function
GO:0042789	mRNA transcription by RNA polymerase II	21873635.	IBA	Process
GO:0045191	regulation of isotype switching	-	IEA	Process
GO:0045191	regulation of isotype switching	-	ISO	Process
GO:0050684	regulation of mRNA processing	21873635.	IBA	Process
GO:0050684	regulation of mRNA processing	-	ISO	Process
GO:0051147	regulation of muscle cell differentiation	-	IEA	Process
GO:0051147	regulation of muscle cell differentiation	-	ISO	Process
GO:0061086	negative regulation of histone H3-K27 methylation	-	IEA	Process
GO:0061086	negative regulation of histone H3-K27 methylation	-	ISO	Process
GO:0070827	chromatin maintenance	21873635.	IBA	Process