EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000012260 (Gene tree)
Gene ID: 58856
Gene Symbol: Ddx25
Alias: GRTH
Full Name: DEAD-box helicase 25
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 16076 bases
Position: chr8:36744667-36760742
Accession: 68381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000017307	DEAD	PF00270.29	2.8e-30	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000017307	-	1659	-	ENSRNOP00000017307	483 (aa)	-	Q68G14

Gene Model

Click here to download ENSRNOG00000012260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000012260's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000012260	Ddx25	78	41.361	ENSRNOG00000030628	Eif4a1	91	41.361
ENSRNOG00000012260	Ddx25	78	40.526	ENSRNOG00000001815	Eif4a2	87	40.798
ENSRNOG00000012260	Ddx25	78	35.079	ENSRNOG00000053932	Ddx6	74	34.324
ENSRNOG00000012260	Ddx25	87	70.922	ENSRNOG00000018033	Ddx19a	88	71.021
ENSRNOG00000012260	Ddx25	77	32.051	ENSRNOG00000051170	Ddx17	54	33.515
ENSRNOG00000012260	Ddx25	78	30.676	ENSRNOG00000002501	Ddx3y	57	31.552
ENSRNOG00000012260	Ddx25	82	31.773	ENSRNOG00000000841	Ddx39b	85	31.714
ENSRNOG00000012260	Ddx25	73	31.967	ENSRNOG00000030680	Ddx5	54	32.754
ENSRNOG00000012260	Ddx25	81	31.579	ENSRNOG00000004373	Ddx39a	85	31.452
ENSRNOG00000012260	Ddx25	77	38.830	ENSRNOG00000045791	Eif4a3	86	38.567

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000012260	Ddx25	100	93.789	ENSG00000109832	DDX25	100	95.393	Homo_sapiens
ENSRNOG00000012260	Ddx25	100	94.421	ENSAMEG00000000138	DDX25	100	94.421	Ailuropoda_melanoleuca
ENSRNOG00000012260	Ddx25	75	70.604	ENSAPLG00000007485	-	99	70.604	Anas_platyrhynchos
ENSRNOG00000012260	Ddx25	98	68.790	ENSACAG00000000173	DDX25	85	74.402	Anolis_carolinensis
ENSRNOG00000012260	Ddx25	100	94.203	ENSANAG00000030502	DDX25	100	94.203	Aotus_nancymaae
ENSRNOG00000012260	Ddx25	100	96.066	ENSBTAG00000004266	DDX25	100	96.066	Bos_taurus
ENSRNOG00000012260	Ddx25	100	92.340	ENSCJAG00000008600	DDX25	100	92.340	Callithrix_jacchus
ENSRNOG00000012260	Ddx25	96	96.104	ENSCAFG00000010519	DDX25	100	97.832	Canis_familiaris
ENSRNOG00000012260	Ddx25	95	92.324	ENSCAFG00020010651	DDX25	99	92.324	Canis_lupus_dingo
ENSRNOG00000012260	Ddx25	100	96.066	ENSCHIG00000014324	-	100	96.066	Capra_hircus
ENSRNOG00000012260	Ddx25	100	92.547	ENSTSYG00000014746	DDX25	100	91.718	Carlito_syrichta
ENSRNOG00000012260	Ddx25	96	93.939	ENSCAPG00000015352	DDX25	97	93.939	Cavia_aperea
ENSRNOG00000012260	Ddx25	100	93.375	ENSCPOG00000011456	DDX25	100	93.375	Cavia_porcellus
ENSRNOG00000012260	Ddx25	100	94.410	ENSCCAG00000027629	DDX25	100	94.410	Cebus_capucinus
ENSRNOG00000012260	Ddx25	100	94.410	ENSCATG00000042562	DDX25	100	94.410	Cercocebus_atys
ENSRNOG00000012260	Ddx25	100	92.961	ENSCLAG00000015793	DDX25	100	92.961	Chinchilla_lanigera
ENSRNOG00000012260	Ddx25	100	91.304	ENSCSAG00000002279	DDX25	100	91.304	Chlorocebus_sabaeus
ENSRNOG00000012260	Ddx25	60	92.683	ENSCHOG00000007751	DDX25	60	92.683	Choloepus_hoffmanni
ENSRNOG00000012260	Ddx25	84	79.607	ENSCPBG00000011165	DDX25	93	79.455	Chrysemys_picta_bellii
ENSRNOG00000012260	Ddx25	84	61.576	ENSCING00000007756	-	86	61.005	Ciona_intestinalis
ENSRNOG00000012260	Ddx25	86	60.287	ENSCSAVG00000009116	-	88	60.766	Ciona_savignyi
ENSRNOG00000012260	Ddx25	100	94.617	ENSCANG00000028422	DDX25	100	94.617	Colobus_angolensis_palliatus
ENSRNOG00000012260	Ddx25	100	99.379	ENSCGRG00001021499	Ddx25	100	99.379	Cricetulus_griseus_chok1gshd
ENSRNOG00000012260	Ddx25	100	99.379	ENSCGRG00000009695	Ddx25	100	99.379	Cricetulus_griseus_crigri
ENSRNOG00000012260	Ddx25	100	96.894	ENSDNOG00000007989	DDX25	100	96.894	Dasypus_novemcinctus
ENSRNOG00000012260	Ddx25	100	97.101	ENSDORG00000001822	Ddx25	100	97.101	Dipodomys_ordii
ENSRNOG00000012260	Ddx25	72	73.121	ENSETEG00000006048	DDX25	80	94.350	Echinops_telfairi
ENSRNOG00000012260	Ddx25	100	95.445	ENSEASG00005023001	DDX25	100	95.445	Equus_asinus_asinus
ENSRNOG00000012260	Ddx25	100	95.445	ENSECAG00000009643	DDX25	100	95.445	Equus_caballus
ENSRNOG00000012260	Ddx25	96	91.342	ENSEEUG00000010847	DDX25	100	90.909	Erinaceus_europaeus
ENSRNOG00000012260	Ddx25	100	97.930	ENSFCAG00000005341	DDX25	100	97.930	Felis_catus
ENSRNOG00000012260	Ddx25	86	69.157	ENSFALG00000005149	DDX25	99	69.157	Ficedula_albicollis
ENSRNOG00000012260	Ddx25	100	91.925	ENSFDAG00000018479	DDX25	100	91.304	Fukomys_damarensis
ENSRNOG00000012260	Ddx25	87	70.142	ENSGALG00000039863	DDX25	84	67.890	Gallus_gallus
ENSRNOG00000012260	Ddx25	86	78.986	ENSGAGG00000015750	DDX25	96	80.198	Gopherus_agassizii
ENSRNOG00000012260	Ddx25	100	93.789	ENSGGOG00000015054	DDX25	100	93.789	Gorilla_gorilla
ENSRNOG00000012260	Ddx25	100	91.511	ENSHGLG00000000748	DDX25	100	91.511	Heterocephalus_glaber_female
ENSRNOG00000012260	Ddx25	100	91.304	ENSHGLG00100010209	DDX25	100	91.304	Heterocephalus_glaber_male
ENSRNOG00000012260	Ddx25	100	96.894	ENSSTOG00000003749	DDX25	100	96.894	Ictidomys_tridecemlineatus
ENSRNOG00000012260	Ddx25	100	97.308	ENSJJAG00000012739	Ddx25	100	97.308	Jaculus_jaculus
ENSRNOG00000012260	Ddx25	88	65.574	ENSLACG00000017651	DDX25	89	65.802	Latimeria_chalumnae
ENSRNOG00000012260	Ddx25	100	95.445	ENSLAFG00000000532	DDX25	100	95.445	Loxodonta_africana
ENSRNOG00000012260	Ddx25	100	94.617	ENSMFAG00000040048	DDX25	100	94.617	Macaca_fascicularis
ENSRNOG00000012260	Ddx25	100	94.617	ENSMMUG00000007624	DDX25	100	94.617	Macaca_mulatta
ENSRNOG00000012260	Ddx25	100	94.617	ENSMNEG00000034512	DDX25	100	94.617	Macaca_nemestrina
ENSRNOG00000012260	Ddx25	100	94.203	ENSMLEG00000041703	DDX25	100	94.203	Mandrillus_leucophaeus
ENSRNOG00000012260	Ddx25	57	70.758	ENSMGAG00000008093	-	99	71.014	Meleagris_gallopavo
ENSRNOG00000012260	Ddx25	100	99.172	ENSMAUG00000012406	Ddx25	100	99.172	Mesocricetus_auratus
ENSRNOG00000012260	Ddx25	100	96.066	ENSMICG00000004073	DDX25	100	96.066	Microcebus_murinus
ENSRNOG00000012260	Ddx25	100	97.930	ENSMOCG00000002484	Ddx25	100	97.930	Microtus_ochrogaster
ENSRNOG00000012260	Ddx25	100	91.511	ENSMODG00000004275	DDX25	100	91.511	Monodelphis_domestica
ENSRNOG00000012260	Ddx25	100	98.965	MGP_CAROLIEiJ_G0031956	Ddx25	100	98.965	Mus_caroli
ENSRNOG00000012260	Ddx25	100	98.554	ENSMUSG00000032101	Ddx25	100	98.554	Mus_musculus
ENSRNOG00000012260	Ddx25	100	98.551	MGP_PahariEiJ_G0014821	Ddx25	100	98.551	Mus_pahari
ENSRNOG00000012260	Ddx25	100	98.554	MGP_SPRETEiJ_G0033080	Ddx25	100	98.554	Mus_spretus
ENSRNOG00000012260	Ddx25	100	96.894	ENSMPUG00000006577	DDX25	95	96.894	Mustela_putorius_furo
ENSRNOG00000012260	Ddx25	96	75.159	ENSMLUG00000008700	DDX25	99	73.868	Myotis_lucifugus
ENSRNOG00000012260	Ddx25	100	97.930	ENSNGAG00000006246	Ddx25	100	97.930	Nannospalax_galili
ENSRNOG00000012260	Ddx25	100	93.996	ENSNLEG00000007461	DDX25	100	93.996	Nomascus_leucogenys
ENSRNOG00000012260	Ddx25	100	82.609	ENSMEUG00000000296	DDX25	100	82.609	Notamacropus_eugenii
ENSRNOG00000012260	Ddx25	92	93.049	ENSOPRG00000002090	-	99	92.377	Ochotona_princeps
ENSRNOG00000012260	Ddx25	100	90.683	ENSODEG00000004301	DDX25	100	90.476	Octodon_degus
ENSRNOG00000012260	Ddx25	89	86.111	ENSOANG00000012968	DDX25	94	86.967	Ornithorhynchus_anatinus
ENSRNOG00000012260	Ddx25	100	94.845	ENSOCUG00000004476	DDX25	100	94.433	Oryctolagus_cuniculus
ENSRNOG00000012260	Ddx25	100	96.066	ENSOGAG00000013409	DDX25	100	96.066	Otolemur_garnettii
ENSRNOG00000012260	Ddx25	100	95.868	ENSOARG00000011935	DDX25	100	95.868	Ovis_aries
ENSRNOG00000012260	Ddx25	100	93.789	ENSPPAG00000027196	DDX25	100	93.789	Pan_paniscus
ENSRNOG00000012260	Ddx25	100	97.930	ENSPPRG00000005392	DDX25	100	97.930	Panthera_pardus
ENSRNOG00000012260	Ddx25	76	98.374	ENSPTIG00000018953	DDX25	100	98.374	Panthera_tigris_altaica
ENSRNOG00000012260	Ddx25	100	93.789	ENSPTRG00000004450	DDX25	100	93.789	Pan_troglodytes
ENSRNOG00000012260	Ddx25	100	94.824	ENSPANG00000005372	DDX25	100	94.824	Papio_anubis
ENSRNOG00000012260	Ddx25	88	78.824	ENSPSIG00000012606	DDX25	99	78.723	Pelodiscus_sinensis
ENSRNOG00000012260	Ddx25	100	98.965	ENSPEMG00000009334	Ddx25	100	98.965	Peromyscus_maniculatus_bairdii
ENSRNOG00000012260	Ddx25	100	90.476	ENSPCIG00000010222	DDX25	100	90.476	Phascolarctos_cinereus
ENSRNOG00000012260	Ddx25	100	93.789	ENSPPYG00000004041	DDX25	100	93.789	Pongo_abelii
ENSRNOG00000012260	Ddx25	100	80.331	ENSPCAG00000000455	DDX25	100	80.331	Procavia_capensis
ENSRNOG00000012260	Ddx25	100	95.238	ENSPCOG00000016873	DDX25	100	95.238	Propithecus_coquereli
ENSRNOG00000012260	Ddx25	65	93.651	ENSPVAG00000014265	DDX25	100	93.651	Pteropus_vampyrus
ENSRNOG00000012260	Ddx25	100	94.410	ENSRBIG00000034284	DDX25	100	94.410	Rhinopithecus_bieti
ENSRNOG00000012260	Ddx25	100	94.824	ENSRROG00000033468	DDX25	100	94.824	Rhinopithecus_roxellana
ENSRNOG00000012260	Ddx25	100	94.410	ENSSBOG00000010854	DDX25	100	94.410	Saimiri_boliviensis_boliviensis
ENSRNOG00000012260	Ddx25	100	91.718	ENSSHAG00000002011	DDX25	100	91.718	Sarcophilus_harrisii
ENSRNOG00000012260	Ddx25	84	88.614	ENSSARG00000013832	DDX25	99	88.586	Sorex_araneus
ENSRNOG00000012260	Ddx25	87	78.385	ENSSPUG00000001492	DDX25	86	82.143	Sphenodon_punctatus
ENSRNOG00000012260	Ddx25	100	95.652	ENSSSCG00000015223	DDX25	100	97.290	Sus_scrofa
ENSRNOG00000012260	Ddx25	88	68.558	ENSTGUG00000000780	DDX25	99	68.646	Taeniopygia_guttata
ENSRNOG00000012260	Ddx25	100	85.507	ENSTTRG00000012183	DDX25	100	85.507	Tursiops_truncatus
ENSRNOG00000012260	Ddx25	99	94.167	ENSUMAG00000001803	DDX25	99	94.167	Ursus_maritimus
ENSRNOG00000012260	Ddx25	92	77.602	ENSVPAG00000001505	DDX25	100	77.376	Vicugna_pacos
ENSRNOG00000012260	Ddx25	96	96.352	ENSVVUG00000020142	DDX25	93	97.506	Vulpes_vulpes
ENSRNOG00000012260	Ddx25	97	58.439	ENSXETG00000000026	ddx25	88	63.658	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	10608860.	IDA	Function
GO:0003724	RNA helicase activity	10608860.	IDA	Function
GO:0004004	ATP-dependent RNA helicase activity	-	IEA	Function
GO:0004004	ATP-dependent RNA helicase activity	-	ISO	Function
GO:0004004	ATP-dependent RNA helicase activity	-	ISS	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005524	ATP binding	-	ISO	Function
GO:0005524	ATP binding	-	ISS	Function
GO:0005634	nucleus	16968703.	IDA	Component
GO:0005634	nucleus	-	IEA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	16968703.	IDA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0006406	mRNA export from nucleus	-	IEA	Process
GO:0006406	mRNA export from nucleus	-	ISO	Process
GO:0006406	mRNA export from nucleus	-	ISS	Process
GO:0006417	regulation of translation	-	IEA	Process
GO:0006417	regulation of translation	-	ISO	Process
GO:0006417	regulation of translation	-	ISS	Process
GO:0007275	multicellular organism development	-	IEA	Process
GO:0007286	spermatid development	-	IEA	Process
GO:0007286	spermatid development	-	ISO	Process
GO:0007286	spermatid development	-	ISS	Process
GO:0016887	ATPase activity	10608860.	IDA	Function
GO:0033391	chromatoid body	-	IEA	Component
GO:0033391	chromatoid body	-	ISO	Component
GO:0033391	chromatoid body	-	ISS	Component