EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000012266 (Gene tree)
Gene ID: 500555
Gene Symbol: Zcchc17
Alias: LOC500555|RGD1565267
Full Name: zinc finger CCHC-type containing 17
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 41774 bases
Position: chr5:148535519-148577292
Accession: 1565267
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000017156	S1	PF00575.23	2.5e-10	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000017156	-	1758	XM_006238968	ENSRNOP00000017156	241 (aa)	XP_006239030	D3ZCQ7

Gene Model

Click here to download ENSRNOG00000012266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000012266's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000012266	Zcchc17	93	94.619	ENSG00000121766	ZCCHC17	96	100.000	Homo_sapiens
ENSRNOG00000012266	Zcchc17	71	57.895	ENSAPOG00000021724	zcchc17	62	61.688	Acanthochromis_polyacanthus
ENSRNOG00000012266	Zcchc17	93	95.516	ENSAMEG00000017710	-	93	95.556	Ailuropoda_melanoleuca
ENSRNOG00000012266	Zcchc17	67	60.870	ENSACIG00000020915	zcchc17	95	60.284	Amphilophus_citrinellus
ENSRNOG00000012266	Zcchc17	71	57.895	ENSAOCG00000003880	zcchc17	62	61.688	Amphiprion_ocellaris
ENSRNOG00000012266	Zcchc17	71	57.895	ENSAPEG00000014460	zcchc17	63	61.688	Amphiprion_percula
ENSRNOG00000012266	Zcchc17	65	59.236	ENSATEG00000015942	zcchc17	64	59.494	Anabas_testudineus
ENSRNOG00000012266	Zcchc17	93	64.286	ENSACAG00000000389	ZCCHC17	66	75.796	Anolis_carolinensis
ENSRNOG00000012266	Zcchc17	93	93.722	ENSANAG00000024208	ZCCHC17	96	100.000	Aotus_nancymaae
ENSRNOG00000012266	Zcchc17	66	61.250	ENSACLG00000019174	zcchc17	62	61.688	Astatotilapia_calliptera
ENSRNOG00000012266	Zcchc17	67	67.901	ENSAMXG00000020595	zcchc17	93	59.729	Astyanax_mexicanus
ENSRNOG00000012266	Zcchc17	93	94.619	ENSBTAG00000016818	ZCCHC17	93	94.667	Bos_taurus
ENSRNOG00000012266	Zcchc17	93	90.135	ENSBTAG00000001432	-	94	90.222	Bos_taurus
ENSRNOG00000012266	Zcchc17	93	91.480	ENSCJAG00000045207	-	93	91.556	Callithrix_jacchus
ENSRNOG00000012266	Zcchc17	93	93.274	ENSCJAG00000006259	ZCCHC17	99	96.552	Callithrix_jacchus
ENSRNOG00000012266	Zcchc17	93	95.067	ENSCAFG00000011131	-	93	95.111	Canis_familiaris
ENSRNOG00000012266	Zcchc17	93	87.111	ENSCAFG00000001857	-	93	90.222	Canis_familiaris
ENSRNOG00000012266	Zcchc17	61	89.116	ENSCAFG00020016032	-	92	89.116	Canis_lupus_dingo
ENSRNOG00000012266	Zcchc17	83	83.636	ENSCAFG00020024828	ZCCHC17	89	100.000	Canis_lupus_dingo
ENSRNOG00000012266	Zcchc17	93	94.619	ENSCHIG00000015629	-	93	94.667	Capra_hircus
ENSRNOG00000012266	Zcchc17	93	88.341	ENSTSYG00000000490	-	96	100.000	Carlito_syrichta
ENSRNOG00000012266	Zcchc17	78	94.149	ENSCAPG00000006774	ZCCHC17	84	93.989	Cavia_aperea
ENSRNOG00000012266	Zcchc17	93	94.170	ENSCPOG00000000106	ZCCHC17	93	94.222	Cavia_porcellus
ENSRNOG00000012266	Zcchc17	76	95.082	ENSCPOG00000022394	-	89	95.082	Cavia_porcellus
ENSRNOG00000012266	Zcchc17	93	93.722	ENSCCAG00000033666	ZCCHC17	96	100.000	Cebus_capucinus
ENSRNOG00000012266	Zcchc17	93	94.170	ENSCATG00000044586	ZCCHC17	96	100.000	Cercocebus_atys
ENSRNOG00000012266	Zcchc17	93	95.067	ENSCLAG00000008794	ZCCHC17	93	95.111	Chinchilla_lanigera
ENSRNOG00000012266	Zcchc17	93	94.619	ENSCSAG00000001032	ZCCHC17	93	94.667	Chlorocebus_sabaeus
ENSRNOG00000012266	Zcchc17	93	72.000	ENSCHOG00000001581	ZCCHC17	93	77.778	Choloepus_hoffmanni
ENSRNOG00000012266	Zcchc17	93	93.722	ENSCANG00000038509	ZCCHC17	96	100.000	Colobus_angolensis_palliatus
ENSRNOG00000012266	Zcchc17	93	96.018	ENSCGRG00001014387	Zcchc17	94	96.018	Cricetulus_griseus_chok1gshd
ENSRNOG00000012266	Zcchc17	93	96.018	ENSCGRG00000013323	Zcchc17	94	96.018	Cricetulus_griseus_crigri
ENSRNOG00000012266	Zcchc17	66	63.924	ENSCSEG00000016039	zcchc17	92	64.539	Cynoglossus_semilaevis
ENSRNOG00000012266	Zcchc17	66	63.125	ENSCVAG00000007112	zcchc17	62	63.636	Cyprinodon_variegatus
ENSRNOG00000012266	Zcchc17	63	68.874	ENSDARG00000018936	zcchc17	65	68.831	Danio_rerio
ENSRNOG00000012266	Zcchc17	93	94.222	ENSDNOG00000000509	-	93	94.222	Dasypus_novemcinctus
ENSRNOG00000012266	Zcchc17	58	100.000	ENSDORG00000004128	Zcchc17	92	100.000	Dipodomys_ordii
ENSRNOG00000012266	Zcchc17	93	93.722	ENSETEG00000007421	ZCCHC17	94	92.889	Echinops_telfairi
ENSRNOG00000012266	Zcchc17	93	94.619	ENSEASG00005010819	ZCCHC17	93	94.667	Equus_asinus_asinus
ENSRNOG00000012266	Zcchc17	93	94.619	ENSECAG00000025040	ZCCHC17	82	94.667	Equus_caballus
ENSRNOG00000012266	Zcchc17	93	90.667	ENSEEUG00000014855	ZCCHC17	93	90.667	Erinaceus_europaeus
ENSRNOG00000012266	Zcchc17	90	53.182	ENSELUG00000002450	zcchc17	64	68.212	Esox_lucius
ENSRNOG00000012266	Zcchc17	100	96.277	ENSFCAG00000004196	ZCCHC17	95	100.000	Felis_catus
ENSRNOG00000012266	Zcchc17	65	82.803	ENSFALG00000001165	ZCCHC17	94	67.241	Ficedula_albicollis
ENSRNOG00000012266	Zcchc17	93	92.825	ENSFDAG00000016520	ZCCHC17	93	92.889	Fukomys_damarensis
ENSRNOG00000012266	Zcchc17	63	59.477	ENSFHEG00000007848	zcchc17	63	59.740	Fundulus_heteroclitus
ENSRNOG00000012266	Zcchc17	64	60.000	ENSGMOG00000010452	zcchc17	61	60.390	Gadus_morhua
ENSRNOG00000012266	Zcchc17	63	83.444	ENSGALG00000000618	ZCCHC17	94	68.889	Gallus_gallus
ENSRNOG00000012266	Zcchc17	64	60.390	ENSGAFG00000015591	zcchc17	63	60.390	Gambusia_affinis
ENSRNOG00000012266	Zcchc17	66	60.625	ENSGACG00000005616	zcchc17	60	61.688	Gasterosteus_aculeatus
ENSRNOG00000012266	Zcchc17	69	81.928	ENSGAGG00000019515	ZCCHC17	91	71.366	Gopherus_agassizii
ENSRNOG00000012266	Zcchc17	93	94.619	ENSGGOG00000009126	ZCCHC17	96	100.000	Gorilla_gorilla
ENSRNOG00000012266	Zcchc17	66	61.250	ENSHBUG00000018638	zcchc17	62	61.688	Haplochromis_burtoni
ENSRNOG00000012266	Zcchc17	93	70.404	ENSHGLG00000014866	-	93	70.667	Heterocephalus_glaber_female
ENSRNOG00000012266	Zcchc17	93	93.722	ENSHGLG00000019323	ZCCHC17	93	93.778	Heterocephalus_glaber_female
ENSRNOG00000012266	Zcchc17	94	82.301	ENSHGLG00000005931	-	93	79.646	Heterocephalus_glaber_female
ENSRNOG00000012266	Zcchc17	93	70.404	ENSHGLG00100000976	-	93	70.667	Heterocephalus_glaber_male
ENSRNOG00000012266	Zcchc17	93	86.996	ENSHGLG00100019907	-	93	87.111	Heterocephalus_glaber_male
ENSRNOG00000012266	Zcchc17	83	84.651	ENSHGLG00100014521	ZCCHC17	92	99.286	Heterocephalus_glaber_male
ENSRNOG00000012266	Zcchc17	76	89.071	ENSHGLG00100009772	-	94	87.560	Heterocephalus_glaber_male
ENSRNOG00000012266	Zcchc17	65	62.179	ENSHCOG00000005075	zcchc17	62	62.338	Hippocampus_comes
ENSRNOG00000012266	Zcchc17	89	59.070	ENSIPUG00000020511	zcchc17	90	58.716	Ictalurus_punctatus
ENSRNOG00000012266	Zcchc17	93	92.825	ENSSTOG00000003825	ZCCHC17	93	92.889	Ictidomys_tridecemlineatus
ENSRNOG00000012266	Zcchc17	69	58.434	ENSKMAG00000003662	zcchc17	64	60.127	Kryptolebias_marmoratus
ENSRNOG00000012266	Zcchc17	66	60.759	ENSLBEG00000002644	zcchc17	62	61.688	Labrus_bergylta
ENSRNOG00000012266	Zcchc17	72	64.740	ENSLACG00000016945	ZCCHC17	93	58.447	Latimeria_chalumnae
ENSRNOG00000012266	Zcchc17	63	77.483	ENSLOCG00000005280	zcchc17	58	77.483	Lepisosteus_oculatus
ENSRNOG00000012266	Zcchc17	93	85.022	ENSLAFG00000015364	ZCCHC17	93	92.576	Loxodonta_africana
ENSRNOG00000012266	Zcchc17	93	94.170	ENSMFAG00000039045	ZCCHC17	96	100.000	Macaca_fascicularis
ENSRNOG00000012266	Zcchc17	93	94.170	ENSMMUG00000012156	ZCCHC17	96	100.000	Macaca_mulatta
ENSRNOG00000012266	Zcchc17	93	94.170	ENSMNEG00000032021	ZCCHC17	96	100.000	Macaca_nemestrina
ENSRNOG00000012266	Zcchc17	93	94.170	ENSMLEG00000040817	ZCCHC17	96	100.000	Mandrillus_leucophaeus
ENSRNOG00000012266	Zcchc17	68	61.350	ENSMAMG00000011701	zcchc17	64	61.635	Mastacembelus_armatus
ENSRNOG00000012266	Zcchc17	66	61.250	ENSMZEG00005005784	zcchc17	62	61.688	Maylandia_zebra
ENSRNOG00000012266	Zcchc17	63	82.895	ENSMGAG00000000777	ZCCHC17	91	68.444	Meleagris_gallopavo
ENSRNOG00000012266	Zcchc17	77	90.323	ENSMAUG00000005269	Zcchc17	72	98.137	Mesocricetus_auratus
ENSRNOG00000012266	Zcchc17	93	95.067	ENSMICG00000009354	-	96	100.000	Microcebus_murinus
ENSRNOG00000012266	Zcchc17	93	84.753	ENSMICG00000028289	-	94	84.889	Microcebus_murinus
ENSRNOG00000012266	Zcchc17	97	66.667	ENSMICG00000027526	-	95	64.889	Microcebus_murinus
ENSRNOG00000012266	Zcchc17	100	96.266	ENSMOCG00000014937	Zcchc17	100	96.266	Microtus_ochrogaster
ENSRNOG00000012266	Zcchc17	59	59.859	ENSMMOG00000019813	zcchc17	67	57.143	Mola_mola
ENSRNOG00000012266	Zcchc17	66	85.535	ENSMODG00000017082	-	95	75.214	Monodelphis_domestica
ENSRNOG00000012266	Zcchc17	66	79.245	ENSMODG00000020372	-	85	79.245	Monodelphis_domestica
ENSRNOG00000012266	Zcchc17	63	74.834	ENSMODG00000025345	-	72	74.834	Monodelphis_domestica
ENSRNOG00000012266	Zcchc17	66	61.875	ENSMALG00000016295	zcchc17	65	62.338	Monopterus_albus
ENSRNOG00000012266	Zcchc17	100	97.510	MGP_CAROLIEiJ_G0026546	Zcchc17	100	97.510	Mus_caroli
ENSRNOG00000012266	Zcchc17	100	97.510	ENSMUSG00000028772	Zcchc17	100	97.510	Mus_musculus
ENSRNOG00000012266	Zcchc17	100	97.095	MGP_PahariEiJ_G0028878	Zcchc17	100	97.095	Mus_pahari
ENSRNOG00000012266	Zcchc17	100	97.095	MGP_SPRETEiJ_G0027526	Zcchc17	100	97.095	Mus_spretus
ENSRNOG00000012266	Zcchc17	93	88.341	ENSMPUG00000015442	ZCCHC17	94	88.444	Mustela_putorius_furo
ENSRNOG00000012266	Zcchc17	93	88.341	ENSMLUG00000000594	ZCCHC17	93	93.778	Myotis_lucifugus
ENSRNOG00000012266	Zcchc17	93	91.964	ENSNGAG00000022689	Zcchc17	93	93.363	Nannospalax_galili
ENSRNOG00000012266	Zcchc17	93	88.341	ENSNLEG00000001493	ZCCHC17	96	100.000	Nomascus_leucogenys
ENSRNOG00000012266	Zcchc17	82	92.386	ENSOPRG00000014449	ZCCHC17	100	92.386	Ochotona_princeps
ENSRNOG00000012266	Zcchc17	93	93.722	ENSODEG00000003683	ZCCHC17	93	93.778	Octodon_degus
ENSRNOG00000012266	Zcchc17	67	60.494	ENSONIG00000002308	zcchc17	62	61.688	Oreochromis_niloticus
ENSRNOG00000012266	Zcchc17	93	82.222	ENSOCUG00000027238	-	93	81.333	Oryctolagus_cuniculus
ENSRNOG00000012266	Zcchc17	76	96.721	ENSOCUG00000014599	-	52	96.721	Oryctolagus_cuniculus
ENSRNOG00000012266	Zcchc17	68	59.756	ENSORLG00000011563	zcchc17	71	60.127	Oryzias_latipes
ENSRNOG00000012266	Zcchc17	68	59.756	ENSORLG00020019636	zcchc17	75	60.127	Oryzias_latipes_hni
ENSRNOG00000012266	Zcchc17	69	59.036	ENSORLG00015011437	zcchc17	65	60.127	Oryzias_latipes_hsok
ENSRNOG00000012266	Zcchc17	68	60.366	ENSOMEG00000009464	zcchc17	64	60.759	Oryzias_melastigma
ENSRNOG00000012266	Zcchc17	91	93.151	ENSOGAG00000013749	ZCCHC17	93	92.889	Otolemur_garnettii
ENSRNOG00000012266	Zcchc17	93	94.196	ENSOARG00000001618	-	93	94.248	Ovis_aries
ENSRNOG00000012266	Zcchc17	93	94.170	ENSPPAG00000030937	ZCCHC17	96	100.000	Pan_paniscus
ENSRNOG00000012266	Zcchc17	93	95.067	ENSPPRG00000003044	ZCCHC17	95	100.000	Panthera_pardus
ENSRNOG00000012266	Zcchc17	93	95.067	ENSPTIG00000010650	ZCCHC17	95	100.000	Panthera_tigris_altaica
ENSRNOG00000012266	Zcchc17	93	94.619	ENSPTRG00000000456	ZCCHC17	96	100.000	Pan_troglodytes
ENSRNOG00000012266	Zcchc17	93	94.170	ENSPANG00000016167	ZCCHC17	96	100.000	Papio_anubis
ENSRNOG00000012266	Zcchc17	62	70.000	ENSPKIG00000010742	zcchc17	60	70.199	Paramormyrops_kingsleyae
ENSRNOG00000012266	Zcchc17	71	80.702	ENSPSIG00000007187	ZCCHC17	94	71.368	Pelodiscus_sinensis
ENSRNOG00000012266	Zcchc17	66	60.000	ENSPMGG00000005830	zcchc17	63	60.390	Periophthalmus_magnuspinnatus
ENSRNOG00000012266	Zcchc17	100	96.266	ENSPEMG00000015853	-	100	96.266	Peromyscus_maniculatus_bairdii
ENSRNOG00000012266	Zcchc17	66	84.277	ENSPCIG00000014143	-	95	74.892	Phascolarctos_cinereus
ENSRNOG00000012266	Zcchc17	94	48.018	ENSPFOG00000007896	zcchc17	93	50.000	Poecilia_formosa
ENSRNOG00000012266	Zcchc17	66	60.127	ENSPLAG00000007114	zcchc17	62	60.390	Poecilia_latipinna
ENSRNOG00000012266	Zcchc17	66	60.127	ENSPMEG00000014567	zcchc17	62	60.390	Poecilia_mexicana
ENSRNOG00000012266	Zcchc17	64	60.390	ENSPREG00000005325	zcchc17	50	60.390	Poecilia_reticulata
ENSRNOG00000012266	Zcchc17	93	93.274	ENSPPYG00000001617	-	79	93.333	Pongo_abelii
ENSRNOG00000012266	Zcchc17	93	83.408	ENSPCAG00000011665	ZCCHC17	93	89.333	Procavia_capensis
ENSRNOG00000012266	Zcchc17	93	95.067	ENSPCOG00000024007	ZCCHC17	96	100.000	Propithecus_coquereli
ENSRNOG00000012266	Zcchc17	93	95.067	ENSPVAG00000014747	ZCCHC17	93	95.111	Pteropus_vampyrus
ENSRNOG00000012266	Zcchc17	66	61.250	ENSPNYG00000009648	zcchc17	95	61.765	Pundamilia_nyererei
ENSRNOG00000012266	Zcchc17	89	60.748	ENSPNAG00000026780	zcchc17	89	60.748	Pygocentrus_nattereri
ENSRNOG00000012266	Zcchc17	93	94.170	ENSRBIG00000033939	ZCCHC17	96	100.000	Rhinopithecus_bieti
ENSRNOG00000012266	Zcchc17	93	94.170	ENSRROG00000028866	ZCCHC17	96	100.000	Rhinopithecus_roxellana
ENSRNOG00000012266	Zcchc17	93	94.170	ENSSBOG00000029249	ZCCHC17	96	100.000	Saimiri_boliviensis_boliviensis
ENSRNOG00000012266	Zcchc17	66	86.792	ENSSHAG00000008748	ZCCHC17	95	77.293	Sarcophilus_harrisii
ENSRNOG00000012266	Zcchc17	90	61.468	ENSSFOG00015021334	zcchc17	59	75.000	Scleropages_formosus
ENSRNOG00000012266	Zcchc17	68	60.123	ENSSMAG00000010817	zcchc17	60	60.510	Scophthalmus_maximus
ENSRNOG00000012266	Zcchc17	66	60.625	ENSSDUG00000009095	zcchc17	61	61.039	Seriola_dumerili
ENSRNOG00000012266	Zcchc17	79	53.927	ENSSLDG00000009837	zcchc17	75	60.127	Seriola_lalandi_dorsalis
ENSRNOG00000012266	Zcchc17	68	80.488	ENSSPUG00000006912	ZCCHC17	90	68.966	Sphenodon_punctatus
ENSRNOG00000012266	Zcchc17	63	60.784	ENSSPAG00000016785	zcchc17	61	61.039	Stegastes_partitus
ENSRNOG00000012266	Zcchc17	93	94.170	ENSSSCG00000031639	ZCCHC17	93	94.222	Sus_scrofa
ENSRNOG00000012266	Zcchc17	57	78.261	ENSTGUG00000000817	ZCCHC17	95	66.981	Taeniopygia_guttata
ENSRNOG00000012266	Zcchc17	72	58.960	ENSTRUG00000013252	zcchc17	88	55.556	Takifugu_rubripes
ENSRNOG00000012266	Zcchc17	67	58.642	ENSTNIG00000016980	zcchc17	65	59.740	Tetraodon_nigroviridis
ENSRNOG00000012266	Zcchc17	93	95.516	ENSTTRG00000014870	ZCCHC17	93	95.556	Tursiops_truncatus
ENSRNOG00000012266	Zcchc17	78	96.809	ENSUAMG00000018258	ZCCHC17	96	96.809	Ursus_americanus
ENSRNOG00000012266	Zcchc17	93	95.516	ENSUMAG00000009188	-	93	95.556	Ursus_maritimus
ENSRNOG00000012266	Zcchc17	100	94.191	ENSVPAG00000003834	ZCCHC17	100	94.191	Vicugna_pacos
ENSRNOG00000012266	Zcchc17	65	80.769	ENSXETG00000012917	zcchc17	86	80.795	Xenopus_tropicalis
ENSRNOG00000012266	Zcchc17	71	56.140	ENSXCOG00000020147	zcchc17	88	54.673	Xiphophorus_couchianus
ENSRNOG00000012266	Zcchc17	71	56.140	ENSXMAG00000002980	zcchc17	63	59.740	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005730	nucleolus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0008270	zinc ion binding	-	IEA	Function
GO:0022625	cytosolic large ribosomal subunit	-	IEA	Component
GO:0022625	cytosolic large ribosomal subunit	-	ISO	Component