EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000012323 (Gene tree)
Gene ID: 290614
Gene Symbol: Cherp
Alias: LOC290614
Full Name: calcium homeostasis endoplasmic reticulum protein
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 13055 bases
Position: chr16:19068783-19081837
Accession: 1305279
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000017424	Surp	PF01805.20	5.1e-16	1	1
ENSRNOP00000017424	G-patch	PF01585.23	4.3e-12	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000017424	-	4084	XM_006252796	ENSRNOP00000017424	935 (aa)	XP_006252858	D3ZAX5

Gene Model

Click here to download ENSRNOG00000012323's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000012323's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000012323	Cherp	99	94.577	ENSG00000085872	CHERP	99	94.469	Homo_sapiens
ENSRNOG00000012323	Cherp	59	61.307	ENSAPOG00000009646	cherp	96	62.612	Acanthochromis_polyacanthus
ENSRNOG00000012323	Cherp	99	65.579	ENSAOCG00000017846	cherp	79	66.186	Amphiprion_ocellaris
ENSRNOG00000012323	Cherp	99	64.135	ENSAPEG00000021128	cherp	79	65.789	Amphiprion_percula
ENSRNOG00000012323	Cherp	99	64.612	ENSATEG00000006341	cherp	99	64.894	Anabas_testudineus
ENSRNOG00000012323	Cherp	76	82.566	ENSAPLG00000010773	CHERP	98	83.130	Anas_platyrhynchos
ENSRNOG00000012323	Cherp	99	93.462	ENSANAG00000024284	CHERP	99	93.355	Aotus_nancymaae
ENSRNOG00000012323	Cherp	99	65.820	ENSACLG00000020053	cherp	79	66.271	Astatotilapia_calliptera
ENSRNOG00000012323	Cherp	99	67.681	ENSAMXG00000021637	cherp	93	67.537	Astyanax_mexicanus
ENSRNOG00000012323	Cherp	99	94.252	ENSBTAG00000005289	CHERP	99	94.035	Bos_taurus
ENSRNOG00000012323	Cherp	99	93.355	ENSCJAG00000040462	CHERP	99	93.248	Callithrix_jacchus
ENSRNOG00000012323	Cherp	99	94.794	ENSCAFG00000015671	CHERP	99	94.577	Canis_familiaris
ENSRNOG00000012323	Cherp	99	93.569	ENSCAFG00020009941	CHERP	99	93.355	Canis_lupus_dingo
ENSRNOG00000012323	Cherp	99	86.501	ENSCHIG00000013765	CHERP	95	96.739	Capra_hircus
ENSRNOG00000012323	Cherp	92	89.836	ENSCAPG00000000910	CHERP	72	92.478	Cavia_aperea
ENSRNOG00000012323	Cherp	100	94.011	ENSCPOG00000019949	CHERP	100	93.690	Cavia_porcellus
ENSRNOG00000012323	Cherp	99	93.569	ENSCCAG00000031534	CHERP	99	93.462	Cebus_capucinus
ENSRNOG00000012323	Cherp	99	93.569	ENSCATG00000031409	CHERP	99	93.569	Cercocebus_atys
ENSRNOG00000012323	Cherp	93	91.591	ENSCLAG00000005484	CHERP	99	91.364	Chinchilla_lanigera
ENSRNOG00000012323	Cherp	99	94.794	ENSCSAG00000005740	CHERP	99	94.685	Chlorocebus_sabaeus
ENSRNOG00000012323	Cherp	99	84.432	ENSCPBG00000014970	CHERP	99	84.000	Chrysemys_picta_bellii
ENSRNOG00000012323	Cherp	69	57.095	ENSCING00000004814	-	54	71.277	Ciona_intestinalis
ENSRNOG00000012323	Cherp	99	94.902	ENSCANG00000032053	CHERP	99	94.794	Colobus_angolensis_palliatus
ENSRNOG00000012323	Cherp	100	97.146	ENSCGRG00001023316	Cherp	100	97.146	Cricetulus_griseus_chok1gshd
ENSRNOG00000012323	Cherp	100	97.647	ENSCGRG00000015901	Cherp	100	97.647	Cricetulus_griseus_crigri
ENSRNOG00000012323	Cherp	79	66.449	ENSCSEG00000019700	cherp	79	65.026	Cynoglossus_semilaevis
ENSRNOG00000012323	Cherp	76	66.071	ENSCVAG00000003622	cherp	93	66.071	Cyprinodon_variegatus
ENSRNOG00000012323	Cherp	99	67.167	ENSDARG00000021812	cherp	100	75.472	Danio_rerio
ENSRNOG00000012323	Cherp	98	89.502	ENSDORG00000027623	Cherp	100	89.286	Dipodomys_ordii
ENSRNOG00000012323	Cherp	62	63.235	FBgn0261872	scaf6	55	63.235	Drosophila_melanogaster
ENSRNOG00000012323	Cherp	81	93.750	ENSETEG00000019543	CHERP	83	93.750	Echinops_telfairi
ENSRNOG00000012323	Cherp	99	94.794	ENSEASG00005000428	CHERP	91	94.577	Equus_asinus_asinus
ENSRNOG00000012323	Cherp	99	94.902	ENSECAG00000012713	CHERP	99	94.685	Equus_caballus
ENSRNOG00000012323	Cherp	99	67.439	ENSELUG00000023026	cherp	80	67.500	Esox_lucius
ENSRNOG00000012323	Cherp	99	93.676	ENSFCAG00000013172	CHERP	99	93.248	Felis_catus
ENSRNOG00000012323	Cherp	80	84.161	ENSFALG00000013410	CHERP	86	83.459	Ficedula_albicollis
ENSRNOG00000012323	Cherp	78	81.696	ENSFDAG00000015981	CHERP	81	79.474	Fukomys_damarensis
ENSRNOG00000012323	Cherp	98	60.049	ENSFHEG00000009720	cherp	79	59.441	Fundulus_heteroclitus
ENSRNOG00000012323	Cherp	79	83.827	ENSGALG00000003824	CHERP	88	83.135	Gallus_gallus
ENSRNOG00000012323	Cherp	98	61.789	ENSGACG00000002053	cherp	98	60.883	Gasterosteus_aculeatus
ENSRNOG00000012323	Cherp	99	84.000	ENSGAGG00000014208	CHERP	99	83.784	Gopherus_agassizii
ENSRNOG00000012323	Cherp	91	77.638	ENSGGOG00000016348	CHERP	99	82.238	Gorilla_gorilla
ENSRNOG00000012323	Cherp	99	65.429	ENSHBUG00000007405	cherp	79	66.140	Haplochromis_burtoni
ENSRNOG00000012323	Cherp	100	92.102	ENSHGLG00000002993	CHERP	100	92.529	Heterocephalus_glaber_female
ENSRNOG00000012323	Cherp	59	80.278	ENSHGLG00100010390	CHERP	68	80.742	Heterocephalus_glaber_male
ENSRNOG00000012323	Cherp	79	65.132	ENSHCOG00000007691	cherp	79	63.789	Hippocampus_comes
ENSRNOG00000012323	Cherp	99	67.697	ENSIPUG00000025008	cherp	99	67.910	Ictalurus_punctatus
ENSRNOG00000012323	Cherp	99	94.816	ENSSTOG00000012089	CHERP	100	94.816	Ictidomys_tridecemlineatus
ENSRNOG00000012323	Cherp	100	88.984	ENSJJAG00000017982	Cherp	81	94.737	Jaculus_jaculus
ENSRNOG00000012323	Cherp	99	63.569	ENSKMAG00000009101	cherp	79	64.613	Kryptolebias_marmoratus
ENSRNOG00000012323	Cherp	85	63.113	ENSLBEG00000007586	cherp	91	64.822	Labrus_bergylta
ENSRNOG00000012323	Cherp	100	80.312	ENSLACG00000018221	CHERP	80	74.804	Latimeria_chalumnae
ENSRNOG00000012323	Cherp	99	74.522	ENSLOCG00000003654	cherp	79	72.977	Lepisosteus_oculatus
ENSRNOG00000012323	Cherp	99	91.549	ENSLAFG00000009096	CHERP	100	91.549	Loxodonta_africana
ENSRNOG00000012323	Cherp	99	93.569	ENSMFAG00000033267	CHERP	99	93.462	Macaca_fascicularis
ENSRNOG00000012323	Cherp	99	89.818	ENSMMUG00000012958	CHERP	82	92.980	Macaca_mulatta
ENSRNOG00000012323	Cherp	99	93.569	ENSMNEG00000004125	CHERP	99	93.462	Macaca_nemestrina
ENSRNOG00000012323	Cherp	92	97.598	ENSMLEG00000044337	CHERP	99	91.758	Mandrillus_leucophaeus
ENSRNOG00000012323	Cherp	99	65.539	ENSMAMG00000022269	cherp	79	66.016	Mastacembelus_armatus
ENSRNOG00000012323	Cherp	99	65.820	ENSMZEG00005018014	cherp	79	66.271	Maylandia_zebra
ENSRNOG00000012323	Cherp	69	83.981	ENSMGAG00000005571	CHERP	97	81.185	Meleagris_gallopavo
ENSRNOG00000012323	Cherp	100	96.512	ENSMAUG00000015856	Cherp	100	96.512	Mesocricetus_auratus
ENSRNOG00000012323	Cherp	99	92.625	ENSMICG00000004577	CHERP	99	93.492	Microcebus_murinus
ENSRNOG00000012323	Cherp	100	97.968	ENSMOCG00000014697	Cherp	100	97.968	Microtus_ochrogaster
ENSRNOG00000012323	Cherp	98	65.638	ENSMMOG00000008525	cherp	77	66.182	Mola_mola
ENSRNOG00000012323	Cherp	99	90.171	ENSMODG00000014938	CHERP	100	90.278	Monodelphis_domestica
ENSRNOG00000012323	Cherp	99	65.536	ENSMALG00000020688	cherp	79	65.122	Monopterus_albus
ENSRNOG00000012323	Cherp	100	99.037	MGP_CAROLIEiJ_G0031220	Cherp	100	99.037	Mus_caroli
ENSRNOG00000012323	Cherp	100	98.721	ENSMUSG00000052488	Cherp	100	98.721	Mus_musculus
ENSRNOG00000012323	Cherp	100	98.182	MGP_PahariEiJ_G0021685	Cherp	100	98.182	Mus_pahari
ENSRNOG00000012323	Cherp	100	98.824	MGP_SPRETEiJ_G0032341	Cherp	100	98.824	Mus_spretus
ENSRNOG00000012323	Cherp	79	94.452	ENSMPUG00000016023	CHERP	78	94.489	Mustela_putorius_furo
ENSRNOG00000012323	Cherp	79	88.275	ENSMLUG00000013881	CHERP	99	87.135	Myotis_lucifugus
ENSRNOG00000012323	Cherp	99	95.484	ENSNGAG00000023323	Cherp	99	93.226	Nannospalax_galili
ENSRNOG00000012323	Cherp	79	65.183	ENSNBRG00000001914	cherp	81	64.967	Neolamprologus_brichardi
ENSRNOG00000012323	Cherp	99	95.011	ENSNLEG00000005536	CHERP	99	94.902	Nomascus_leucogenys
ENSRNOG00000012323	Cherp	89	92.764	ENSMEUG00000010840	CHERP	91	94.063	Notamacropus_eugenii
ENSRNOG00000012323	Cherp	79	93.188	ENSODEG00000001528	CHERP	81	92.916	Octodon_degus
ENSRNOG00000012323	Cherp	99	64.774	ENSONIG00000007686	cherp	79	65.189	Oreochromis_niloticus
ENSRNOG00000012323	Cherp	99	63.751	ENSORLG00000000138	cherp	79	65.086	Oryzias_latipes
ENSRNOG00000012323	Cherp	99	63.646	ENSORLG00020013142	cherp	86	73.591	Oryzias_latipes_hni
ENSRNOG00000012323	Cherp	99	63.636	ENSORLG00015008911	cherp	79	64.954	Oryzias_latipes_hsok
ENSRNOG00000012323	Cherp	99	63.751	ENSOMEG00000016947	cherp	99	63.191	Oryzias_melastigma
ENSRNOG00000012323	Cherp	100	92.316	ENSOGAG00000005834	CHERP	100	92.209	Otolemur_garnettii
ENSRNOG00000012323	Cherp	99	83.585	ENSOARG00000018876	CHERP	79	83.400	Ovis_aries
ENSRNOG00000012323	Cherp	99	93.355	ENSPPAG00000029195	CHERP	99	93.355	Pan_paniscus
ENSRNOG00000012323	Cherp	99	93.676	ENSPPRG00000003275	CHERP	99	93.248	Panthera_pardus
ENSRNOG00000012323	Cherp	99	94.577	ENSPTRG00000010647	CHERP	99	94.577	Pan_troglodytes
ENSRNOG00000012323	Cherp	99	93.569	ENSPANG00000011698	CHERP	99	93.462	Papio_anubis
ENSRNOG00000012323	Cherp	98	83.550	ENSPSIG00000011974	CHERP	99	84.035	Pelodiscus_sinensis
ENSRNOG00000012323	Cherp	99	61.905	ENSPMGG00000023606	cherp	89	89.024	Periophthalmus_magnuspinnatus
ENSRNOG00000012323	Cherp	100	97.040	ENSPEMG00000011238	Cherp	100	97.040	Peromyscus_maniculatus_bairdii
ENSRNOG00000012323	Cherp	99	90.215	ENSPCIG00000019615	CHERP	95	90.215	Phascolarctos_cinereus
ENSRNOG00000012323	Cherp	99	64.657	ENSPFOG00000016899	cherp	99	64.021	Poecilia_formosa
ENSRNOG00000012323	Cherp	85	63.158	ENSPMEG00000002214	cherp	76	65.645	Poecilia_mexicana
ENSRNOG00000012323	Cherp	99	64.407	ENSPREG00000020774	cherp	99	64.157	Poecilia_reticulata
ENSRNOG00000012323	Cherp	99	88.829	ENSPPYG00000009691	CHERP	99	88.937	Pongo_abelii
ENSRNOG00000012323	Cherp	99	83.514	ENSPCAG00000001337	CHERP	90	95.652	Procavia_capensis
ENSRNOG00000012323	Cherp	64	100.000	ENSPCOG00000022788	CHERP	99	100.000	Propithecus_coquereli
ENSRNOG00000012323	Cherp	99	85.141	ENSPVAG00000004320	CHERP	90	97.826	Pteropus_vampyrus
ENSRNOG00000012323	Cherp	99	65.503	ENSPNYG00000003942	cherp	79	65.744	Pundamilia_nyererei
ENSRNOG00000012323	Cherp	99	66.736	ENSPNAG00000017179	cherp	99	66.528	Pygocentrus_nattereri
ENSRNOG00000012323	Cherp	99	94.685	ENSRBIG00000038621	CHERP	99	94.577	Rhinopithecus_bieti
ENSRNOG00000012323	Cherp	99	93.569	ENSRROG00000040770	CHERP	99	93.462	Rhinopithecus_roxellana
ENSRNOG00000012323	Cherp	99	93.462	ENSSBOG00000014492	CHERP	99	93.462	Saimiri_boliviensis_boliviensis
ENSRNOG00000012323	Cherp	99	89.648	ENSSHAG00000010752	CHERP	99	90.144	Sarcophilus_harrisii
ENSRNOG00000012323	Cherp	87	84.810	ENSSFOG00015008022	cherp	84	75.522	Scleropages_formosus
ENSRNOG00000012323	Cherp	99	64.509	ENSSMAG00000005362	cherp	99	63.114	Scophthalmus_maximus
ENSRNOG00000012323	Cherp	99	67.937	ENSSDUG00000019712	cherp	79	68.571	Seriola_dumerili
ENSRNOG00000012323	Cherp	99	67.585	ENSSLDG00000012659	cherp	79	69.211	Seriola_lalandi_dorsalis
ENSRNOG00000012323	Cherp	99	82.829	ENSSPUG00000008901	CHERP	99	81.641	Sphenodon_punctatus
ENSRNOG00000012323	Cherp	99	66.525	ENSSPAG00000010681	cherp	79	65.065	Stegastes_partitus
ENSRNOG00000012323	Cherp	99	95.011	ENSSSCG00000013860	CHERP	99	94.794	Sus_scrofa
ENSRNOG00000012323	Cherp	99	85.374	ENSTGUG00000000680	CHERP	99	85.265	Taeniopygia_guttata
ENSRNOG00000012323	Cherp	82	63.098	ENSTRUG00000007429	cherp	88	62.743	Takifugu_rubripes
ENSRNOG00000012323	Cherp	99	63.309	ENSTNIG00000003363	cherp	80	63.192	Tetraodon_nigroviridis
ENSRNOG00000012323	Cherp	88	93.831	ENSTTRG00000015006	CHERP	89	93.544	Tursiops_truncatus
ENSRNOG00000012323	Cherp	99	87.055	ENSUAMG00000017295	CHERP	80	92.926	Ursus_americanus
ENSRNOG00000012323	Cherp	66	87.129	ENSUMAG00000000965	CHERP	70	83.648	Ursus_maritimus
ENSRNOG00000012323	Cherp	99	92.636	ENSVVUG00000016546	CHERP	99	92.850	Vulpes_vulpes
ENSRNOG00000012323	Cherp	55	83.821	ENSXETG00000002072	cherp	57	82.407	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005737	cytoplasm	-	ISO	Component
GO:0006396	RNA processing	-	IEA	Process
GO:0006874	cellular calcium ion homeostasis	-	ISO	Process
GO:0008285	negative regulation of cell proliferation	-	IEA	Process
GO:0008285	negative regulation of cell proliferation	-	ISO	Process
GO:0033017	sarcoplasmic reticulum membrane	21454501.	IDA	Component
GO:0044325	ion channel binding	-	IEA	Function
GO:0044325	ion channel binding	-	ISO	Function
GO:0048471	perinuclear region of cytoplasm	-	IEA	Component
GO:0048471	perinuclear region of cytoplasm	-	ISO	Component
GO:0051209	release of sequestered calcium ion into cytosol	-	IEA	Process
GO:0051209	release of sequestered calcium ion into cytosol	-	ISO	Process
GO:0070886	positive regulation of calcineurin-NFAT signaling cascade	-	IEA	Process
GO:0070886	positive regulation of calcineurin-NFAT signaling cascade	-	ISO	Process